View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21620_high_29 (Length: 238)
Name: NF21620_high_29
Description: NF21620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21620_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30214659 - 30214439
Alignment:
| Q |
1 |
aaccacatcctccgtactttctttctacatggtattgagttttatctgattcaaggtcatcattgtacttgtattggcttccatcattcaccacaaagta |
100 |
Q |
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| T |
30214659 |
aaccacatcctccgtactttctttctacatggtattgagttttatctgattcaaggtcatcataggacttgtattggcttccatcattcaccacaaagta |
30214560 |
T |
|
| Q |
101 |
attgttccaagaaaatctaagctatgacgtcgatttatgagatcagtgtgctacaaatagtacatacattaaattatttatttcttgtgaaaaattcata |
200 |
Q |
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||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30214559 |
attattacaagaaaatctaagctatgacgtcgatttatgagatcagtgtgctacaaatagtacatacattaaattatttatttcttgtgaaaaattcata |
30214460 |
T |
|
| Q |
201 |
aaaattaccaaacaaagttaa |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
30214459 |
aaaattaccaaacaaagttaa |
30214439 |
T |
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