View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21620_low_5 (Length: 545)

Name: NF21620_low_5
Description: NF21620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21620_low_5
NF21620_low_5
[»] chr7 (69 HSPs)
chr7 (219-545)||(8346334-8346660)
chr7 (216-545)||(8329847-8330175)
chr7 (215-506)||(8343644-8343931)
chr7 (217-516)||(4247356-4247653)
chr7 (217-516)||(44944677-44944978)
chr7 (216-509)||(24725311-24725607)
chr7 (216-514)||(14055250-14055552)
chr7 (216-514)||(14365278-14365580)
chr7 (218-516)||(5058530-5058825)
chr7 (216-516)||(27221417-27221711)
chr7 (255-516)||(17811385-17811645)
chr7 (217-516)||(5715290-5715582)
chr7 (217-406)||(24990012-24990200)
chr7 (215-401)||(26281256-26281440)
chr7 (216-518)||(7730189-7730472)
chr7 (216-366)||(9685224-9685374)
chr7 (287-509)||(20570724-20570944)
chr7 (217-361)||(22687649-22687793)
chr7 (216-355)||(39182259-39182397)
chr7 (226-518)||(11324988-11325277)
chr7 (217-355)||(11326386-11326524)
chr7 (217-509)||(6916786-6917068)
chr7 (224-341)||(8571250-8571367)
chr7 (217-519)||(21846276-21846554)
chr7 (237-375)||(27509914-27510052)
chr7 (418-506)||(8329821-8329909)
chr7 (215-408)||(26617415-26617607)
chr7 (420-518)||(39182357-39182455)
chr7 (418-506)||(8346308-8346396)
chr7 (354-519)||(26565377-26565540)
chr7 (257-355)||(1977692-1977790)
chr7 (417-516)||(24989606-24989704)
chr7 (216-309)||(21157811-21157904)
chr7 (430-518)||(1977760-1977847)
chr7 (483-545)||(21846315-21846377)
chr7 (417-519)||(30294444-30294545)
chr7 (417-509)||(8572336-8572427)
chr7 (216-303)||(8630001-8630088)
chr7 (483-545)||(7730227-7730289)
chr7 (484-545)||(8343670-8343731)
chr7 (483-539)||(4247555-4247611)
chr7 (215-311)||(26565663-26565759)
chr7 (485-545)||(39182357-39182417)
chr7 (457-516)||(8304324-8304383)
chr7 (384-500)||(27509260-27509374)
chr7 (483-541)||(24725344-24725402)
chr7 (483-545)||(27509280-27509342)
chr7 (483-545)||(30294445-30294507)
chr7 (217-312)||(30294175-30294267)
chr7 (485-525)||(5058627-5058667)
chr7 (450-518)||(22687097-22687165)
chr7 (485-525)||(27221516-27221556)
chr7 (493-541)||(44944717-44944765)
chr7 (493-539)||(1977758-1977804)
chr7 (457-519)||(4574968-4575030)
chr7 (483-545)||(14055456-14055518)
chr7 (483-545)||(14365484-14365546)
chr7 (483-541)||(17811547-17811605)
chr7 (485-523)||(22687657-22687695)
chr7 (483-541)||(24989645-24989703)
chr7 (483-545)||(26565416-26565478)
chr7 (221-290)||(4574475-4574544)
chr7 (484-525)||(6916877-6916918)
chr7 (479-516)||(9685126-9685163)
chr7 (485-525)||(7730334-7730374)
chr7 (420-460)||(9685235-9685275)
chr7 (493-525)||(17811453-17811485)
chr7 (485-525)||(20570876-20570916)
chr7 (485-525)||(24990062-24990102)
[»] chr6 (57 HSPs)
chr6 (6-213)||(27606365-27606573)
chr6 (216-518)||(30912236-30912542)
chr6 (217-516)||(26053128-26053425)
chr6 (217-516)||(26073181-26073478)
chr6 (217-509)||(15527949-15528239)
chr6 (216-518)||(23897810-23898109)
chr6 (216-516)||(7223518-7223812)
chr6 (215-516)||(19748331-19748630)
chr6 (216-516)||(17103201-17103492)
chr6 (216-509)||(17543569-17543870)
chr6 (217-443)||(17250057-17250280)
chr6 (263-406)||(21354786-21354928)
chr6 (256-383)||(22498848-22498975)
chr6 (215-482)||(10508883-10509154)
chr6 (216-516)||(11327394-11327701)
chr6 (217-385)||(7918342-7918510)
chr6 (216-355)||(27233268-27233407)
chr6 (216-342)||(6943464-6943590)
chr6 (220-376)||(2912218-2912373)
chr6 (351-516)||(7918182-7918343)
chr6 (215-309)||(18491074-18491168)
chr6 (215-296)||(5422798-5422879)
chr6 (417-520)||(4841657-4841760)
chr6 (417-516)||(22498272-22498371)
chr6 (418-518)||(2912091-2912191)
chr6 (417-516)||(3573732-3573831)
chr6 (219-294)||(3573984-3574059)
chr6 (483-545)||(2912129-2912191)
chr6 (254-312)||(4841953-4842011)
chr6 (215-294)||(10958239-10958318)
chr6 (216-321)||(12245108-12245213)
chr6 (484-544)||(10508886-10508946)
chr6 (483-545)||(4841697-4841759)
chr6 (483-541)||(17103394-17103452)
chr6 (483-541)||(19748532-19748590)
chr6 (483-541)||(22498312-22498370)
chr6 (256-309)||(18490998-18491051)
chr6 (420-461)||(27233267-27233308)
chr6 (493-545)||(3573768-3573820)
chr6 (485-525)||(7223610-7223650)
chr6 (486-525)||(23897910-23897949)
chr6 (483-534)||(23898010-23898061)
chr6 (339-395)||(27614594-27614651)
chr6 (482-545)||(30912274-30912337)
chr6 (483-541)||(7918222-7918280)
chr6 (483-541)||(17543602-17543660)
chr6 (483-541)||(26053168-26053226)
chr6 (483-541)||(26073221-26073279)
chr6 (215-309)||(27890132-27890225)
chr6 (224-281)||(8545030-8545087)
chr6 (256-309)||(18490922-18490975)
chr6 (485-526)||(27233267-27233308)
chr6 (245-285)||(7359876-7359916)
chr6 (485-525)||(15528101-15528141)
chr6 (485-525)||(17103293-17103333)
chr6 (420-460)||(17250155-17250195)
chr6 (485-525)||(30912403-30912443)
[»] chr1 (56 HSPs)
chr1 (217-516)||(23528656-23528953)
chr1 (215-516)||(13100189-13100487)
chr1 (224-516)||(16125287-16125580)
chr1 (216-516)||(9954865-9955165)
chr1 (216-520)||(25146596-25146898)
chr1 (216-446)||(9327116-9327345)
chr1 (215-516)||(9351895-9352194)
chr1 (216-519)||(18304640-18304941)
chr1 (217-471)||(13276143-13276395)
chr1 (218-516)||(42179903-42180193)
chr1 (219-516)||(19009780-19010073)
chr1 (216-509)||(21846113-21846398)
chr1 (219-514)||(12513283-12513566)
chr1 (316-518)||(47785958-47786157)
chr1 (218-515)||(17869583-17869873)
chr1 (217-409)||(9128778-9128969)
chr1 (216-355)||(41032661-41032800)
chr1 (306-518)||(32881416-32881619)
chr1 (216-350)||(17055995-17056129)
chr1 (417-519)||(16434709-16434809)
chr1 (217-312)||(14074404-14074499)
chr1 (294-398)||(18228278-18228380)
chr1 (217-304)||(12800623-12800710)
chr1 (417-516)||(17055751-17055850)
chr1 (217-292)||(30619075-30619150)
chr1 (216-321)||(18337547-18337651)
chr1 (216-283)||(34478833-34478900)
chr1 (215-309)||(24117005-24117099)
chr1 (420-518)||(41032603-41032701)
chr1 (220-303)||(27917495-27917578)
chr1 (483-545)||(27917240-27917302)
chr1 (483-534)||(13100389-13100440)
chr1 (434-505)||(14074326-14074397)
chr1 (483-541)||(23528855-23528913)
chr1 (483-545)||(47786057-47786119)
chr1 (484-541)||(18304683-18304740)
chr1 (433-518)||(30619156-30619240)
chr1 (485-525)||(9327206-9327246)
chr1 (485-525)||(9955026-9955066)
chr1 (485-525)||(12513379-12513419)
chr1 (493-545)||(18228473-18228525)
chr1 (485-525)||(19009937-19009977)
chr1 (485-545)||(41032641-41032701)
chr1 (483-545)||(17055787-17055849)
chr1 (482-520)||(17055995-17056033)
chr1 (483-541)||(21846146-21846204)
chr1 (275-309)||(27502239-27502273)
chr1 (495-545)||(32881531-32881581)
chr1 (493-534)||(16125334-16125375)
chr1 (420-460)||(9128831-9128871)
chr1 (484-516)||(9321567-9321599)
chr1 (420-460)||(9327206-9327246)
chr1 (485-525)||(9352054-9352094)
chr1 (220-268)||(12003241-12003289)
chr1 (493-525)||(13276257-13276289)
chr1 (493-525)||(32881433-32881465)
[»] chr4 (54 HSPs)
chr4 (216-518)||(5361795-5362093)
chr4 (216-516)||(36120823-36121120)
chr4 (216-518)||(10142898-10143199)
chr4 (219-516)||(5375666-5375962)
chr4 (217-516)||(9770112-9770409)
chr4 (217-516)||(9911243-9911541)
chr4 (216-406)||(13023566-13023758)
chr4 (218-518)||(17466080-17466378)
chr4 (216-516)||(23064793-23065093)
chr4 (215-405)||(8889226-8889415)
chr4 (216-366)||(13551602-13551752)
chr4 (216-518)||(37240261-37240538)
chr4 (217-350)||(8011212-8011345)
chr4 (217-311)||(4156763-4156857)
chr4 (216-310)||(24719516-24719610)
chr4 (218-311)||(7044728-7044821)
chr4 (354-516)||(8010968-8011129)
chr4 (421-519)||(6346784-6346882)
chr4 (368-519)||(24719725-24719875)
chr4 (216-321)||(18459733-18459838)
chr4 (417-509)||(7044961-7045053)
chr4 (216-297)||(7452419-7452499)
chr4 (221-321)||(7815561-7815661)
chr4 (361-505)||(9149565-9149709)
chr4 (216-322)||(6347088-6347194)
chr4 (483-545)||(8011004-8011066)
chr4 (433-519)||(10394824-10394910)
chr4 (454-516)||(55476223-55476285)
chr4 (217-290)||(9149791-9149864)
chr4 (449-518)||(18459461-18459530)
chr4 (493-542)||(24719784-24719833)
chr4 (486-545)||(5361833-5361892)
chr4 (486-545)||(6346823-6346882)
chr4 (354-519)||(7045078-7045244)
chr4 (420-519)||(7452707-7452805)
chr4 (483-541)||(9911283-9911341)
chr4 (483-545)||(17466278-17466340)
chr4 (216-289)||(18327342-18327415)
chr4 (216-289)||(18437982-18438055)
chr4 (482-522)||(4157050-4157090)
chr4 (485-525)||(9911402-9911442)
chr4 (441-519)||(5943088-5943166)
chr4 (483-545)||(7044962-7045024)
chr4 (483-541)||(23064833-23064891)
chr4 (483-541)||(36121022-36121080)
chr4 (315-352)||(4157053-4157090)
chr4 (484-545)||(10143100-10143161)
chr4 (479-516)||(13551504-13551541)
chr4 (493-526)||(36120930-36120963)
chr4 (281-321)||(7803070-7803110)
chr4 (493-525)||(8889334-8889366)
chr4 (485-525)||(10142997-10143037)
chr4 (420-460)||(13551613-13551653)
chr4 (493-525)||(37240363-37240395)
[»] chr8 (58 HSPs)
chr8 (216-516)||(11879599-11879897)
chr8 (216-516)||(11897015-11897313)
chr8 (219-509)||(15294672-15294959)
chr8 (219-509)||(15475041-15475328)
chr8 (215-509)||(5922047-5922338)
chr8 (218-518)||(29384142-29384444)
chr8 (216-405)||(31424162-31424350)
chr8 (217-516)||(45403029-45403326)
chr8 (219-516)||(19704289-19704583)
chr8 (266-518)||(23142224-23142473)
chr8 (217-518)||(17646993-17647296)
chr8 (256-518)||(6810861-6811118)
chr8 (216-518)||(22910033-22910332)
chr8 (221-405)||(3094185-3094378)
chr8 (265-516)||(7489115-7489368)
chr8 (236-516)||(32424354-32424631)
chr8 (215-405)||(27836406-27836595)
chr8 (221-407)||(6292282-6292467)
chr8 (306-400)||(9212202-9212295)
chr8 (384-518)||(15761188-15761322)
chr8 (216-320)||(24056594-24056698)
chr8 (216-292)||(477101-477177)
chr8 (483-545)||(29384180-29384242)
chr8 (215-312)||(15761473-15761570)
chr8 (434-519)||(17566313-17566398)
chr8 (483-545)||(8582242-8582304)
chr8 (418-516)||(24414119-24414217)
chr8 (417-490)||(8582241-8582314)
chr8 (484-545)||(17647197-17647258)
chr8 (216-280)||(17788372-17788436)
chr8 (483-542)||(15761229-15761288)
chr8 (483-545)||(6811019-6811080)
chr8 (483-541)||(23142373-23142431)
chr8 (433-518)||(15231835-15231920)
chr8 (419-504)||(24056414-24056499)
chr8 (493-545)||(22910071-22910123)
chr8 (420-460)||(31424261-31424301)
chr8 (481-516)||(2040381-2040416)
chr8 (481-516)||(27836131-27836166)
chr8 (483-541)||(11879799-11879857)
chr8 (483-541)||(11897215-11897273)
chr8 (245-355)||(15231752-15231862)
chr8 (418-518)||(31424366-31424463)
chr8 (454-516)||(40541652-40541714)
chr8 (215-264)||(23136347-23136396)
chr8 (485-525)||(5922147-5922187)
chr8 (481-541)||(7489155-7489215)
chr8 (218-262)||(9036757-9036801)
chr8 (485-525)||(9212246-9212286)
chr8 (420-460)||(9212246-9212286)
chr8 (493-525)||(11879706-11879738)
chr8 (493-525)||(11897122-11897154)
chr8 (485-525)||(15294768-15294808)
chr8 (485-525)||(15475137-15475177)
chr8 (460-516)||(16752264-16752320)
chr8 (485-525)||(19704446-19704486)
chr8 (493-525)||(23142281-23142313)
chr8 (485-525)||(31424261-31424301)
[»] chr5 (39 HSPs)
chr5 (217-509)||(43234868-43235158)
chr5 (215-518)||(21058986-21059286)
chr5 (218-516)||(18843716-18844012)
chr5 (216-509)||(19578941-19579233)
chr5 (218-509)||(23172267-23172560)
chr5 (216-509)||(18051372-18051660)
chr5 (225-519)||(27340016-27340307)
chr5 (217-509)||(38158103-38158383)
chr5 (266-409)||(19979648-19979790)
chr5 (266-509)||(20320992-20321233)
chr5 (214-383)||(22645681-22645851)
chr5 (254-509)||(41688505-41688757)
chr5 (217-342)||(20923718-20923843)
chr5 (219-291)||(19042444-19042516)
chr5 (384-519)||(43005688-43005823)
chr5 (221-290)||(24106645-24106714)
chr5 (361-505)||(26021464-26021605)
chr5 (457-516)||(41427657-41427716)
chr5 (483-545)||(21059025-21059087)
chr5 (219-283)||(20320926-20320990)
chr5 (483-541)||(27340059-27340117)
chr5 (450-519)||(24648240-24648309)
chr5 (464-516)||(15051929-15051981)
chr5 (216-268)||(24647938-24647990)
chr5 (454-505)||(19377838-19377889)
chr5 (483-541)||(18843914-18843972)
chr5 (316-358)||(19042406-19042448)
chr5 (483-541)||(20321142-20321200)
chr5 (483-541)||(23172300-23172358)
chr5 (317-355)||(43005747-43005785)
chr5 (483-541)||(43235067-43235125)
chr5 (485-525)||(18051521-18051561)
chr5 (493-525)||(19042409-19042441)
chr5 (245-309)||(19377084-19377148)
chr5 (485-525)||(19579040-19579080)
chr5 (420-460)||(19979697-19979737)
chr5 (485-525)||(19979697-19979737)
chr5 (493-525)||(21059147-21059179)
chr5 (493-525)||(41688656-41688688)
[»] scaffold0186 (3 HSPs)
scaffold0186 (216-516)||(8442-8738)
scaffold0186 (483-534)||(8640-8691)
scaffold0186 (485-525)||(8541-8581)
[»] chr2 (49 HSPs)
chr2 (216-516)||(31237808-31238107)
chr2 (216-518)||(15588685-15588979)
chr2 (216-509)||(1404782-1405073)
chr2 (218-514)||(35565788-35566082)
chr2 (216-385)||(30432418-30432587)
chr2 (216-516)||(36429847-36430145)
chr2 (219-408)||(31578007-31578194)
chr2 (216-516)||(20063713-20064020)
chr2 (216-346)||(23863321-23863451)
chr2 (300-509)||(1690567-1690774)
chr2 (215-312)||(1690796-1690893)
chr2 (217-343)||(19491855-19491982)
chr2 (217-311)||(16766710-16766804)
chr2 (354-519)||(16766922-16767085)
chr2 (354-519)||(27406927-27407091)
chr2 (219-350)||(25539222-25539353)
chr2 (384-519)||(13502502-13502637)
chr2 (384-516)||(19262148-19262279)
chr2 (215-312)||(5395682-5395779)
chr2 (354-516)||(25538977-25539138)
chr2 (244-309)||(34841583-34841648)
chr2 (486-545)||(16766987-16767046)
chr2 (216-296)||(19245152-19245232)
chr2 (252-312)||(31023258-31023318)
chr2 (216-322)||(15266081-15266187)
chr2 (417-509)||(30433013-30433105)
chr2 (483-545)||(13502541-13502603)
chr2 (483-545)||(35565825-35565887)
chr2 (457-516)||(974576-974635)
chr2 (457-519)||(19245827-19245889)
chr2 (483-541)||(19262188-19262246)
chr2 (483-541)||(30433014-30433072)
chr2 (315-355)||(13502561-13502601)
chr2 (464-516)||(27523928-27523980)
chr2 (485-525)||(31237968-31238008)
chr2 (316-355)||(16766987-16767026)
chr2 (483-545)||(25539013-25539075)
chr2 (222-289)||(27406782-27406851)
chr2 (485-526)||(1404881-1404922)
chr2 (215-312)||(8428140-8428237)
chr2 (218-295)||(15516610-15516687)
chr2 (493-545)||(1690596-1690648)
chr2 (464-516)||(7302027-7302079)
chr2 (437-509)||(8428440-8428512)
chr2 (483-527)||(15588740-15588784)
chr2 (216-312)||(17995054-17995150)
chr2 (464-516)||(20034054-20034106)
chr2 (485-525)||(30432517-30432557)
chr2 (485-525)||(36429946-36429986)
[»] chr3 (70 HSPs)
chr3 (216-516)||(28745769-28746073)
chr3 (215-383)||(29067282-29067450)
chr3 (220-499)||(39427905-39428183)
chr3 (215-518)||(8155959-8156262)
chr3 (216-514)||(24620031-24620333)
chr3 (222-518)||(17064326-17064606)
chr3 (217-514)||(22137278-22137572)
chr3 (290-514)||(42696920-42697143)
chr3 (217-516)||(20756039-20756319)
chr3 (218-366)||(3449272-3449419)
chr3 (217-343)||(30727694-30727820)
chr3 (226-409)||(21963438-21963620)
chr3 (226-409)||(21985874-21986056)
chr3 (255-404)||(22494731-22494872)
chr3 (216-321)||(27676355-27676460)
chr3 (306-408)||(15515195-15515296)
chr3 (217-311)||(24649724-24649818)
chr3 (417-519)||(27676634-27676736)
chr3 (374-518)||(25870152-25870294)
chr3 (417-519)||(6136398-6136500)
chr3 (215-366)||(22356032-22356184)
chr3 (417-516)||(13286142-13286241)
chr3 (216-363)||(25870350-25870506)
chr3 (216-309)||(15806543-15806635)
chr3 (216-313)||(17796376-17796473)
chr3 (216-313)||(19104816-19104913)
chr3 (417-518)||(28135960-28136061)
chr3 (483-545)||(6136437-6136499)
chr3 (417-518)||(3449140-3449241)
chr3 (216-313)||(17796267-17796364)
chr3 (216-313)||(17796485-17796582)
chr3 (216-313)||(19104707-19104804)
chr3 (216-313)||(19104925-19105022)
chr3 (221-294)||(25614037-25614110)
chr3 (217-309)||(13005927-13006019)
chr3 (417-519)||(10872544-10872646)
chr3 (483-545)||(13286143-13286205)
chr3 (218-296)||(28135723-28135801)
chr3 (483-545)||(42697047-42697109)
chr3 (253-321)||(10872971-10873039)
chr3 (460-516)||(22971050-22971106)
chr3 (457-516)||(8592231-8592290)
chr3 (483-534)||(25870201-25870252)
chr3 (483-545)||(3449178-3449240)
chr3 (483-545)||(17064506-17064568)
chr3 (483-545)||(27676635-27676697)
chr3 (483-541)||(28745975-28746033)
chr3 (417-499)||(29067475-29067557)
chr3 (485-525)||(8156121-8156161)
chr3 (483-539)||(20756221-20756277)
chr3 (315-355)||(27676637-27676677)
chr3 (481-516)||(3041485-3041520)
chr3 (481-516)||(18014253-18014288)
chr3 (483-542)||(21963630-21963689)
chr3 (483-542)||(21986066-21986125)
chr3 (226-313)||(27497653-27497740)
chr3 (483-545)||(22137476-22137538)
chr3 (481-519)||(27090704-27090742)
chr3 (483-532)||(39428102-39428151)
chr3 (315-355)||(6136457-6136497)
chr3 (481-509)||(8560296-8560324)
chr3 (315-355)||(13286145-13286185)
chr3 (315-355)||(25870210-25870250)
chr3 (493-525)||(28745876-28745908)
chr3 (485-525)||(29067382-29067422)
chr3 (483-539)||(29067476-29067532)
chr3 (493-525)||(39428008-39428040)
chr3 (466-514)||(41671426-41671474)
chr3 (221-265)||(42696870-42696914)
chr3 (493-525)||(42696953-42696985)
[»] scaffold0417 (1 HSPs)
scaffold0417 (215-514)||(7289-7586)
[»] scaffold0042 (3 HSPs)
scaffold0042 (216-519)||(93534-93834)
scaffold0042 (483-545)||(93573-93635)
scaffold0042 (486-522)||(93700-93736)
[»] scaffold0603 (3 HSPs)
scaffold0603 (354-519)||(8788-8952)
scaffold0603 (216-296)||(9070-9150)
scaffold0603 (483-545)||(8827-8889)
[»] scaffold0510 (3 HSPs)
scaffold0510 (216-355)||(91-231)
scaffold0510 (420-518)||(34-131)
scaffold0510 (485-534)||(82-131)
[»] scaffold0036 (1 HSPs)
scaffold0036 (216-321)||(37191-37296)
[»] scaffold0016 (3 HSPs)
scaffold0016 (417-509)||(56264-56356)
scaffold0016 (338-382)||(58746-58790)
scaffold0016 (483-541)||(56297-56355)
[»] scaffold0048 (5 HSPs)
scaffold0048 (216-309)||(48825-48918)
scaffold0048 (419-519)||(61143-61243)
scaffold0048 (419-505)||(48505-48591)
scaffold0048 (257-311)||(61418-61472)
scaffold0048 (484-545)||(48530-48591)
[»] scaffold0534 (1 HSPs)
scaffold0534 (434-519)||(885-970)
[»] scaffold0115 (1 HSPs)
scaffold0115 (217-302)||(35103-35188)
[»] scaffold1892 (1 HSPs)
scaffold1892 (255-320)||(886-951)
[»] scaffold0163 (1 HSPs)
scaffold0163 (217-294)||(2388-2465)
[»] scaffold0028 (1 HSPs)
scaffold0028 (454-519)||(145823-145888)
[»] scaffold0150 (1 HSPs)
scaffold0150 (454-519)||(33173-33238)
[»] scaffold0079 (1 HSPs)
scaffold0079 (484-516)||(14758-14790)
[»] scaffold0027 (1 HSPs)
scaffold0027 (464-516)||(132947-132999)


Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 219 - 545
Target Start/End: Complemental strand, 8346660 - 8346334
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||       ||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgatattacgatt 8346361  T
Q  519 tcttatatcaattctataaaagtagtt 545  Q
    |||||||||||||||||||||||||||    
T  8346360 tcttatatcaattctataaaagtagtt 8346334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 216 - 545
Target Start/End: Complemental strand, 8330175 - 8329847
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  8330175 cattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaa 8330076  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta-ttattannnnn 414  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||          
T  8330075 aaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatt--tttt 8329978  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      ||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| ||||    
T  8329977 ttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattgcgattttac 8329878  T
Q  515 gatttcttatatcaattctataaaagtagtt 545  Q
    |||||||||||||||||||| ||||||||||    
T  8329877 gatttcttatatcaattctacaaaagtagtt 8329847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 215 - 506
Target Start/End: Complemental strand, 8343931 - 8343644
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    ||||||||||||||||| || | |||||  ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  8343931 ccattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatga 8343832  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||         
T  8343831 aaaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattattttt 8343732  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 506  Q
        ||||||||||||| |||||||||||||| | ||||| |||||||||||||||| |||| || ||||||||| ||||||||||||||||    
T  8343731 ----taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattgc 8343644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 4247356 - 4247653
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    ||||||||||||||||  | ||||||  ||||||| |||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||  ||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||| ||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||||            
T  4247456 aattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatca-tttgtaacatatatttagtattatt-tttttta 4247553  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| || |  | ||||||||||||| || |||||||||||| ||||||    
T  4247554 ggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgattgcgattttacga 4247653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 217 - 516
Target Start/End: Complemental strand, 44944978 - 44944677
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcac----cttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    ||||||||| |||||||||||||||||||| |||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  313 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 412  Q
      ||||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-tt 44944781  T
Q  413 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 512  Q
        |||||| || || ||||||||||||||||| |  |||||||||||| |||||||| ||||  |  ||||||||  ||||||||| |||||||| ||    
T  44944780 ttttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgatttt 44944681  T
Q  513 acga 516  Q
    ||||    
T  44944680 acga 44944677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 216 - 509
Target Start/End: Complemental strand, 24725607 - 24725311
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  ||||||  | |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||  |    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat----tann 411  Q
    ||||||||  ||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    |       
T  24725507 aaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattattttatttt 24725409  T
Q  412 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
         |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||| |||||||||||||||    
T  24725408 ttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattgcgat 24725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 216 - 514
Target Start/End: Original strand, 14055250 - 14055552
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||||  ||||| ||  ||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 410  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14055448  T
Q  411 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 510  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || ||||||||||||||||||||| |||||||     
T  14055449 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14055548  T
Q  511 ttac 514  Q
    ||||    
T  14055549 ttac 14055552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 216 - 514
Target Start/End: Original strand, 14365278 - 14365580
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||||  ||||| ||  ||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 410  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14365476  T
Q  411 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 510  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || ||||||||||||||||||||| |||||||     
T  14365477 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgatt 14365576  T
Q  511 ttac 514  Q
    ||||    
T  14365577 ttac 14365580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 218 - 516
Target Start/End: Original strand, 5058530 - 5058825
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||| |||||||||  ||||||| || ||||||||| |||||||||||||||||||  |||||||||||||||||  |||||||  |||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    ||||   |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       |    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-ttttttg 5058727  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||| ||||| ||||||||||||||||| |  |||| ||||||| |||| ||| || |  | || ||||||||||||||||||||||| || ||||||    
T  5058728 gtaaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacga 5058825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 27221417 - 27221711
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||| |  |    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||           
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagttttttt-----tt 27221610  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||| ||||  | |||||| |||||||||| |  ||||| || ||| |||||||| ||||   |||||||||||||||||||||||||||||| |||||    
T  27221611 tggtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacg 27221710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 255 - 516
Target Start/End: Original strand, 17811385 - 17811645
Alignment:
Q  255 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttat 354  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || |||||| |||||||||||||||||||||||    
T  17811385 gattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttat 17811484  T
Q  355 aaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgattt 454  Q
    |||||||||||| ||| | ||||||||| ||||||| ||||||||| ||||| ||       |||||||||||| ||||||||||||||||| |  ||||    
T  17811485 aaactaagtcatttataattatatacca-tttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgattttacaattt 17811583  T
Q  455 cttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
      |||||| |||||||| ||||  | |||||||||| |||||||||||||||||| ||||||    
T  17811584 tctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacga 17811645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 5715290 - 5715582
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||  ||||||| |||||||||||||||| | |||||||||| ||| |||| ||||||||||| ||||||||   ||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||| ||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | | || ||            
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatttttttt-----ttt 5715482  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  | ||||||||||| ||||||||||||||||| ||||||    
T  5715483 ggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgcgattttacga 5715582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 217 - 406
Target Start/End: Complemental strand, 24990200 - 24990012
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||| | |||||||||   |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||  ||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 406  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatacta-tttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 215 - 401
Target Start/End: Complemental strand, 26281440 - 26281256
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||| | |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       
T  26281440 ccattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagc 26281341  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttag 401  Q
    ||||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  26281340 aaaatccatcgatttt-gttgcgatttaacgatttcttataaactaagtcatttatgactatatacca-tttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 7730472 - 7730189
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||||||||||||  ||||||  ||| ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| ||    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| |||                  |||||||||||||||||||||| ||           
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatca------------------tttataacatatatttagtattttttttttgt 7730292  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     ||||||||||||  |||||||||||||||| |  |||||||||||||||| |||| |||| || |||||||| | |||||||||| ||||||| |||||    
T  7730291 tggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttggttgcgattttacg 7730192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 9685374 - 9685224
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||  |||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||| |    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcat 366  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9685274 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 9685224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 509
Target Start/End: Complemental strand, 20570944 - 20570724
Alignment:
Q  287 aaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccatttt 386  Q
    ||||| |||||||||||  |||||||| ||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatatacca-ttt 20570846  T
Q  387 ataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaa 486  Q
    ||||||||||||||||||||||        |||||| ||||| ||||||||||| ||||| || |||||||||||| |||||||| ||||  | ||||||    
T  20570845 ataacatatatttagtattatt-cttttttggtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaa 20570747  T
Q  487 aatccttcgattttgattgcgat 509  Q
    |||| ||| ||||||||||||||    
T  20570746 aatctttcaattttgattgcgat 20570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 217 - 361
Target Start/End: Complemental strand, 22687793 - 22687649
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||  ||||||| |||| |||||||||||||||| ||||||| |||||||||||| | |||||||||||||||  ||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaa 361  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaactaa 22687649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||| ||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  316 aaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||| ||||||  |||||||||||| ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 226 - 518
Target Start/End: Original strand, 11324988 - 11325277
Alignment:
Q  226 aaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 325  Q
    ||||||| |||||||||  ||||||| | ||||||| || |||||||||||||||||||||||||||||| |||||| | |||||||  ||||| || |     
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattca-ta 11325086  T
Q  326 attttaattgcgattttacgatttcttataaactaagtcatctatgactatatacca---ttttataacatatatttagtattattannnnnnnggtaaa 422  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    ||||||||  ||||||||| || ||        ||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataac--atatttagttttttt--ttttttggtaaa 11325182  T
Q  423 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    |||||| |||||||||||  |||| |  ||||| |||||||||| ||||||||| || |||||||| ||||  | |||| ||||||| ||||||||    
T  11325183 atccatcgattttgattgtaattttacaatttc-tatatcaattttacagaagtagttgagtaaaacccttgaaatttggttgcgattttacgatt 11325277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 217 - 355
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    ||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  317 aatccattgattttaattgcgattttacgatttcttata 355  Q
    |||| || |||||| ||||||||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 217 - 509
Target Start/End: Original strand, 6916786 - 6917068
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||| || |||||| || |||||||||||||||||| ||| || |||||     ||||||||| ||||||||||| | ||||  |  |    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttttcacct-----gactcaaattcatagtagaattctaaaa--gtta 6916878  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| | |||| |||||||||||||||||||||||||| |||||||| ||||||| ||| |||  |||||||||||||||| || ||||           
T  6916879 aaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcca-gttataacatatatttaata-tatttttttgt 6916975  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
     |||||||| ||| |||||||||||| |||| || |||||||||||| ||| ||   |||| || |||||||||||||| ||||||||||||||    
T  6916976 tggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgattgcgat 6917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  224 tcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccat 323  Q
    ||||||||| |||||||||  ||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  324 tgattttaattgcgattt 341  Q
     |||||| ||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 519
Target Start/End: Complemental strand, 21846554 - 21846276
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||||| | |||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||| || |||||| |||||||                    |||||||| |||||||||||| || ||||||||||||||||| |||||||            
T  21846455 aatcaatcgattttgattgcga--------------------taagtcatttatgactatatatca-tttataacatatatttaatattatt--tatttg 21846379  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||  |||||||||| ||||| | ||||||||||||| |||||| | |||| || || |||||||||||||||||| ||||||| ||| ||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttggttgcgattttagga 21846279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 375
Target Start/End: Complemental strand, 27510052 - 27509914
Alignment:
Q  237 ttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgc 336  Q
    ||||||| ||||||  |||||||||||| ||||||||| | |||||| ||||||| ||||||||||   |||||||  ||||| |||  ||||| |||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  337 gattttacgatttcttataaactaagtcatctatgacta 375  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  27509952 gattttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 8329909 - 8329821
Alignment:
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 506  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||| || |||||||||||||| |||||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattgc 8329821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 408
Target Start/End: Complemental strand, 26617607 - 26617415
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatcc--atagtagaatcccaaa--at 310  Q
    |||||||| | ||||| ||||||| |||  ||||||| |||||||||||||||| |||||||||||||||  |||| |  |||||||||| | |||  ||    
T  26617607 ccattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatat 26617508  T
Q  311 agaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 408  Q
    ||  |||||| || |||||| |||||||||||||||  |||| || |||||||||| |||||||||    || |||||||||||||||||||||||||    
T  26617507 aggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----ca-tttataacatatatttagtattatt 26617415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 39182357 - 39182455
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||| ||||||| ||||||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| ||||||| ||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgatt 39182455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 8346396 - 8346308
Alignment:
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 506  Q
    ||||||||| ||||||||||||||||| | | |||||||||||||||||||| | |||| || ||||||||||||||||||||| ||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttgtttgc 8346308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 354 - 519
Target Start/End: Complemental strand, 26565540 - 26565377
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||| |  ||||||        ||||||||||||  ||||||||||| |||| | ||||    
T  26565540 taaactgagtcatttatgactatatac-agtttataacatatattaac-attatttttgttttggtaaaatccatcaattttgattgcaattttacgatt 26565443  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    | ||||||  |||||||| |||| || |||||||||||||||||||||||| |||| |||||||||    
T  26565442 ttttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattt 26565377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 1977692 - 1977790
Alignment:
Q  257 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||   ||||| | | |||||| |||||||||||| |||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 516
Target Start/End: Complemental strand, 24989704 - 24989606
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  |  ||||||||||||||||||||||||| || ||||||    
T  24989704 ggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcct-tagtaaaatccttcgattttgattgccattttacga 24989606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 21157904 - 21157811
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||||||| |||| ||||||||||| |||||||| ||| ||||||||||||  |||| | ||||||||||||||||||| | ||||| ||||    
T  21157904 cattgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 518
Target Start/End: Original strand, 1977760 - 1977847
Alignment:
Q  430 gattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||||||||||| | ||||||||||||| |||||| | || |  | ||||||||||||||||||||||||||||| ||||||||    
T  1977760 gattttgattgcgattttaggatttcttatatcgattctaaaaaa-taattgagtaaaatccttcgattttgattgcgattttacgatt 1977847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 21846377 - 21846315
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  21846377 gtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagtt 21846315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 519
Target Start/End: Original strand, 30294444 - 30294545
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| || |||||||| ||||| | |||||||| |||| |||||| | |||| ||  |||||||||||||||||||||||| ||| ||||||    
T  30294444 ggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgattgtgat-ttacga 30294542  T
Q  517 ttt 519  Q
    |||    
T  30294543 ttt 30294545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 8572336 - 8572427
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||||||||| | ||  | || ||| ||| ||||||||||||||||||    
T  8572336 ggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgattgcgat 8572427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 8630088 - 8630001
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 303  Q
    ||||||||||||||||  ||||||| |   ||||| ||||||||||| |||||  | | |||||||||||||||||||||||||||||    
T  8630088 cattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 7730289 - 7730227
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || |||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  7730289 gtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagtt 7730227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 8343731 - 8343670
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||||| | || |||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  8343731 taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagtt 8343670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 539
Target Start/End: Original strand, 4247555 - 4247611
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaa 539  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  4247555 gtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaa 4247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 311
Target Start/End: Complemental strand, 26565759 - 26565663
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    |||||||||||||||| ||| |||||||  ||||||| || ||||||  ||||| ||||| || ||||| |||||| ||||| |||||| |||||||    
T  26565759 ccattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 545
Target Start/End: Original strand, 39182357 - 39182417
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| ||||||||| ||||||| |||| |||||||||||| |||||| ||||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagtt 39182417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 457 - 516
Target Start/End: Original strand, 8304324 - 8304383
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||| ||| ||||||    
T  8304324 tatatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacga 8304383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 500
Target Start/End: Complemental strand, 27509374 - 27509260
Alignment:
Q  384 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 483  Q
    |||||||||||||||||||||||||        ||||||||| || || ||| |||||||||| |  |||||||||||| |||||| | |||| || |||    
T  27509374 tttataacatatatttagtattatt--ttttttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgag 27509277  T
Q  484 taaaatccttcgatttt 500  Q
    ||||||||||| |||||    
T  27509276 taaaatccttcaatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 24725402 - 24725344
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  24725402 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 24725344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 27509342 - 27509280
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||  |||| ||| |||||||| |||| |||||||||||| |||||||||||||||||    
T  27509342 gtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagtt 27509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 30294445 - 30294507
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||| |||||||| ||| ||| |||||||| |||| |||||||||||||||||    
T  30294445 gtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagtt 30294507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 30294175 - 30294267
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||||||||||  ||||||||  ||||||  ||||||||| || ||| ||||||||   |||||||||||||||| | |||| ||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaatag 30294267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 5058627 - 5058667
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  5058627 aaaatcctacgattttgattgcgattttacgatttcttata 5058667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 518
Target Start/End: Complemental strand, 22687165 - 22687097
Alignment:
Q  450 gatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||||||| |||||||| |||| || ||||||||| |||| |||||| ||| ||| ||||||||    
T  22687165 gatttcttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgattttacgatt 22687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 27221516 - 27221556
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  27221516 aaaatccatcgattttgattgcgattttacgatttcttata 27221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 44944765 - 44944717
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  44944765 tcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 44944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 1977758 - 1977804
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaa 539  Q
    ||||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  1977758 tcgattttgattgcgattttaggatttcttatatcgattctaaaaaa 1977804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 4574968 - 4575030
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||| |||||||| |||| || ||||| ||| ||| ||||||||||||||| |||||||||    
T  4574968 tatatcgattctacaaaagtagttgagtagaattctttgattttgattgcgattttacgattt 4575030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 14055456 - 14055518
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| | ||||||||||||||| || | ||||||||||||  ||||| ||||||||||    
T  14055456 gtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagtt 14055518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 14365484 - 14365546
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| | ||||||||||||||| || | ||||||||||||  ||||| ||||||||||    
T  14365484 gtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagtt 14365546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 17811547 - 17811605
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||  |||||| |||||| ||||||    
T  17811547 gtaaaatccatcgattttgattgcgattttacaattttctatatcgattctacaaaagt 17811605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Complemental strand, 22687695 - 22687657
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttctta 523  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  22687695 aaaatccatcgattttgattgcgattttacgatttctta 22687657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 24989703 - 24989645
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||  ||||| |||||| |||||| ||||||    
T  24989703 gtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagt 24989645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 26565478 - 26565416
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || ||||||||||| || ||||||||| ||||||  |||||| ||||||||||    
T  26565478 gtaaaatccatcaattttgattgcaattttacgattttttatattgattctacaaaagtagtt 26565416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 4574475 - 4574544
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaat 290  Q
    |||| |||||| ||||||||||  ||||||  || |||||||||||||  ||||||||||||| ||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacgattcaaat 4574544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 6916877 - 6916918
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  6916877 taaaatccatcggttttgattgcgattttacgatttcttata 6916918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 516
Target Start/End: Complemental strand, 9685163 - 9685126
Alignment:
Q  479 tcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  9685163 tcgagtaaaatccttcgattttaattgcgattttacga 9685126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 7730374 - 7730334
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  7730374 aaaatccatcgattttgattgagattttacgatttcttata 7730334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 9685275 - 9685235
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttata 9685235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 17811453 - 17811485
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  17811453 tcgattttgattgcgattttacgatttcttata 17811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 20570916 - 20570876
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  20570916 aaaatccatcgattttgattgcaattttacgatttcttata 20570876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 24990102 - 24990062
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  24990102 aaaatccatcgattttgattgcaattttacgatttcttata 24990062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 27606365 - 27606573
Alignment:
Q  6 aacccatccaaccatagccgttttgaataaaatattaataaaagtacttgcaatagcaacaaatacaaaacatgtttcattatgaaagtttaaggttaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27606365 aacccatccaaccatagccgttttgaataaaatattaataaaagtacttacaatagcaacaaatacaaaacatgtttcattatgaaaatttaaggttaga 27606464  T
Q  106 ac-aactctgcccattcagcnnnnnnngaaacacatttgttcctccctataaagcttttgggagaggtaattcaaaacacaagtcctcaccagggcaggc 204  Q
    || |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27606465 acaaactctgcccattcagcaaaaaaagaaacacatttgttcctccctataaagcttttgggagaggtaattcgaaatacaagtcctcaccagggcaggc 27606564  T
Q  205 atggataac 213  Q
    |||||||||    
T  27606565 atggataac 27606573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 30912542 - 30912236
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||||           
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatca-tttatcacatatatttagtattatttttttgt 30912344  T
Q  416 ng-----gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 510  Q
     |     ||||||||||| |||| |||||||||||  ||||||||||||||| ||| |||| |||| || || ||||||||||| |||||| ||| |||     
T  30912343 ggtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagatt 30912244  T
Q  511 ttacgatt 518  Q
    ||||||||    
T  30912243 ttacgatt 30912236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 217 - 516
Target Start/End: Complemental strand, 26053425 - 26053128
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26053228  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||| ||| ||||||    
T  26053227 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacga 26053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 217 - 516
Target Start/End: Complemental strand, 26073478 - 26073181
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26073281  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||| ||| ||||||    
T  26073280 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacga 26073181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 217 - 509
Target Start/End: Complemental strand, 15528239 - 15527949
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||||  |||||||| ||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  |           
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatatacca-tttataacatatatttagtatta-aattttttg 15528042  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    ||  |||||||| ||||| ||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15528041 ggggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 15527949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 23897810 - 23898109
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||  || |||| |||||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||       
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||           
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt-ttttttttt 23898007  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| || |||| |||||    
T  23898008 tggtaaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttggtttcgattttacg 23898106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 7223518 - 7223812
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||       || |||||||||||||||| ||||||||   |    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatat----atttagtattattann 411  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    |||||||||||||       
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaatttagtattatt--t 7223707  T
Q  412 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatat 511  Q
         ||||||||||||||||| |||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||| || |    
T  7223708 tgtttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattt 7223807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 215 - 516
Target Start/End: Original strand, 19748331 - 19748630
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||| ||||||||| ||||||||| ||| |||  ||||||||| || |||||||||||| || ||||||||||| ||||||||||  |||||||      
T  19748331 ccattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggc 19748430  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    ||||| ||| |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||||||||||         
T  19748431 aaaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatca-tttataaaatatatttagtattatta-tttt 19748528  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||    
T  19748529 ctggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttac 19748628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 17103201 - 17103492
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||       || ||||||||||||||| |||||||||||||||||||||| |    
T  17103201 cattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatagaca 17103293  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||||| || || ||||||||| || ||||| ||||||||||| ||||| |           
T  17103294 aaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatca-tttatgacatatatttattattaat-tttttt 17103391  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||| | ||||||||||| |||||    
T  17103392 aggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacg 17103491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 216 - 509
Target Start/End: Complemental strand, 17543870 - 17543569
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||  |||||||||  ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||   |    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta------ 409  Q
    ||||| || |||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||          
T  17543770 aaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatatacca-tttataacatatatttagtattattatttttt 17543672  T
Q  410 ---nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgc 506  Q
              |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||||||||||||||||| |    
T  17543671 ttttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatttc 17543572  T
Q  507 gat 509  Q
    |||    
T  17543571 gat 17543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 217 - 443
Target Start/End: Original strand, 17250057 - 17250280
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||| ||||||| |||||||||  ||||||  |||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||||| || ||||            
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata--aatttataatatatatttattactatt-gtttttt 17250253  T
Q  417 ggtaaaatccattgattttgattgcga 443  Q
    |||||||||||||||||||||||||||    
T  17250254 ggtaaaatccattgattttgattgcga 17250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 263 - 406
Target Start/End: Original strand, 21354786 - 21354928
Alignment:
Q  263 gactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaag 362  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21354786 gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaag 21354885  T
Q  363 tcatctatgactatataccattttataacatatatttagtatta 406  Q
    | || ||||||||||||||| |||||||||||||||||||||||    
T  21354886 taatttatgactatatacca-tttataacatatatttagtatta 21354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 256 - 383
Target Start/End: Complemental strand, 22498975 - 22498848
Alignment:
Q  256 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  22498975 attttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaattttacgatttcttata 22498876  T
Q  356 aactaagtcatctatgactatataccat 383  Q
    ||| ||||||| ||||||||||||||||    
T  22498875 aacgaagtcatttatgactatataccat 22498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 215 - 482
Target Start/End: Complemental strand, 10509154 - 10508883
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    ||||| |||||||||||| |||||||||  ||||||| || | |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||      
T  10509154 ccattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggc 10509055  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatatacc-----attttataacatatatttagtattatta 409  Q
    ||||| ||| |||||| ||| ||||||||||| || |||||||||||||||| ||| ||||||||||       ||||||||||||||||| ||||||||    
T  10509054 aaaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattatta 10508956  T
Q  410 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcga 482  Q
           | ||||||||||  |||||||||||||||| |  |||||||||||| |||||||| |||| |||||    
T  10508955 ttattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagtcga 10508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 216 - 516
Target Start/End: Complemental strand, 11327701 - 11327394
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| ||||||||   ||||||  | | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattatt------ 408  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||| ||||| |||| ||||||  |||||||          
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtatacca-tttatcacatgtatttatttattatttatttt 11327503  T
Q  409 -annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcg 507  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||||||    
T  11327502 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcg 11327403  T
Q  508 atattacga 516  Q
    || ||||||    
T  11327402 attttacga 11327394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 217 - 385
Target Start/End: Complemental strand, 7918510 - 7918342
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||   ||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 385  Q
    |||| || |||||| |||| |||||| |||||| ||||||| |||||||| |||||||||||| |||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcattt 7918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 216 - 355
Target Start/End: Complemental strand, 27233407 - 27233268
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||| | | |||||||||  ||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  316 aaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  27233307 aaatccatcgattttgattgcgattttatgatttcttata 27233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 6943590 - 6943464
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  316 aaatccattgattttaattgcgatttt 342  Q
    |||| ||| |||||| |||||||||||    
T  6943490 aaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 376
Target Start/End: Complemental strand, 2912373 - 2912218
Alignment:
Q  220 gttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaat 319  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||| || ||||||||| |||||| ||||||||||||  ||||||   |||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  320 ccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactat 376  Q
     ||| |||||| ||||| |||||||||||| |||||||| ||||||| |||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 351 - 516
Target Start/End: Complemental strand, 7918343 - 7918182
Alignment:
Q  351 ttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatg 450  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||| |||||||||||||        |||||||||||| ||||||||||||||||| |      
T  7918343 ttataaattaagtcatttatgactatatatcattt-ataacataaatttagtattatt---tttttggtaaaatccatcgattttgattgcgattttaca 7918248  T
Q  451 atttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||| |||||  |||||||| ||||  | ||||||||| |||||||||||||||| || ||||||    
T  7918247 atttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacga 7918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 18491168 - 18491074
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||| ||||||||||| |||||||||  ||||||  || |||||||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  18491168 ccattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 5422879 - 5422798
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatag 296  Q
    |||||||||||||||||| |||||||||  ||||||| | |||||||| ||||| |||||||||||||||||||||| ||||    
T  5422879 ccattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 520
Target Start/End: Complemental strand, 4841760 - 4841657
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||| ||||||||||||||||| | ||||||||||  | |||||||| |||| || ||||||||||||| ||||||||||| ||| || |||    
T  4841760 ggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgattgtgatttttcga 4841661  T
Q  517 tttc 520  Q
    ||||    
T  4841660 tttc 4841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 516
Target Start/End: Complemental strand, 22498371 - 22498272
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||| ||| |||||||||||||| ||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcgattttacga 22498272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 2912191 - 2912091
Alignment:
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 517  Q
    ||||||||| | ||||||||||||||||| |  |||||||||| |||||||||| |||| || |||||||||||||| |||| ||||  ||| |||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacgat 2912092  T
Q  518 t 518  Q
    |    
T  2912091 t 2912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 516
Target Start/End: Complemental strand, 3573831 - 3573732
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||  ||| ||||||||||||||||| |  |||||||||||| ||||||||  ||| || ||||||| |||| |||||||||||||||| ||||||    
T  3573831 ggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgattgcgattttacga 3573732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccat 294  Q
    |||| ||||||| | |||||||||| ||||||  || |||| ||||||||||||||||||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 2912191 - 2912129
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||| ||||||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagtt 2912129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 4842011 - 4841953
Alignment:
Q  254 ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  4842011 ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataatag 4841953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 10958318 - 10958239
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccat 294  Q
    |||||||||||||||||  ||||||||| | |||||| |||||||||||||||   |||||||||| || ||||||||||    
T  10958318 ccattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaaggattcaaatccat 10958239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 12245108 - 12245213
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||| ||| |||||| |||||||| || ||||||||||||| ||||| ||||  || | |||||||| | | |||||||||| ||| |    
T  12245108 cattgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttcatggatttaaatccattgcaaaatcccaaaacagata 12245207  T
Q  316 aaatcc 321  Q
    ||||||    
T  12245208 aaatcc 12245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 10508946 - 10508886
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagt 544  Q
    |||||||| || |||||||||||||| |||| |||||||||||| |||||| |||||||||    
T  10508946 taaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagt 10508886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 4841759 - 4841697
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| | ||||||||||||||||| ||||||||||||||  | |||||| ||||||||||    
T  4841759 gtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagtt 4841697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 17103394 - 17103452
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  17103394 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 17103452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 19748532 - 19748590
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  19748532 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 19748590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 22498370 - 22498312
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  22498370 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 22498312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 18491051 - 18490998
Alignment:
Q  256 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    ||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  18491051 attttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatat 461  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 3573820 - 3573768
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||||||||||| |||| |||||||||||| |||||| || |||||||    
T  3573820 tcgattttgattgcgattttacaatttcttatatctattctacaagagtagtt 3573768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 7223610 - 7223650
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  7223610 aaaatccatcgattttgattgcgattttacgatttcttata 7223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 525
Target Start/End: Original strand, 23897910 - 23897949
Alignment:
Q  486 aaatccttcgattttgattgcgatattacgatttcttata 525  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  23897910 aaatccatcgattttgattgcgattttacgatttcttata 23897949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 23898010 - 23898061
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||||| ||||||    
T  23898010 gtaaaatccatcgattttgattgagattttacaatttcttatatcgattcta 23898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  339 ttttacgatttcttataaac--taagtcatctatgactatataccattttataacatat 395  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatatacca-tttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 545
Target Start/End: Complemental strand, 30912337 - 30912274
Alignment:
Q  482 agtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||||||| |||||| ||||||||||  || ||||||||||||| ||| || ||||||||||    
T  30912337 agtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagtt 30912274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 7918280 - 7918222
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||    
T  7918280 gtaaaatccatcgattttgattgcgattttacaatttcctatattgattctacaaaagt 7918222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 17543660 - 17543602
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||    
T  17543660 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 17543602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 26053226 - 26053168
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||    
T  26053226 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 26053168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 26073279 - 26073221
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| |||||  ||||| |||||| ||||||    
T  26073279 gtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 26073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 27890132 - 27890225
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||| |||||||||||| |||||||| |   |||||| ||| |||||||||||| |  | ||| |||||||||||||||||  ||||||||||||    
T  27890132 ccatggttgtcaaaatc-tgacttaagtcccaaaattcaggtttttgcgactttgtgtagctttaacgactcaaatccatatcagaatcccaaaa 27890225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 8545087 - 8545030
Alignment:
Q  224 tcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaac 281  Q
    ||||||||| || ||||||  ||||||||||||||||||||||||  |||| ||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaac 8545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 18490975 - 18490922
Alignment:
Q  256 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    ||||||| ||||| |||||||||||||||| ||| |||||| | ||||||||||    
T  18490975 attttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaa 18490922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 526
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttatat 526  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 7359876 - 7359916
Alignment:
Q  245 taaaatttaggattttgcgactttcttcaccttcaacgact 285  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  7359876 taaaatttaagatttagcgactttattcaccttcaacgact 7359916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 15528141 - 15528101
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||| ||||||||| |||||||||||||||    
T  15528141 aaaatccatcgatttcgattgcgattttacgatttcttata 15528101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 17103293 - 17103333
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||| |||| |||||||||||||||    
T  17103293 aaaatccatcgattttgattacgattttacgatttcttata 17103333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 17250155 - 17250195
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||| ||||||||||||||||||||| | |||||||||||    
T  17250155 aaaattcattgattttgattgcgattttacgatttcttata 17250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 30912443 - 30912403
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| | ||||||||||||||| |||||||||||||||    
T  30912443 aaaatccatagattttgattgcgattttacgatttcttata 30912403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 8e-84; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 23528656 - 23528953
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    ||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||| || |||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||| ||||||||           
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatatacca-tttataacgtatatttattattatta-ttattg 23528853  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  23528854 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 23528953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 215 - 516
Target Start/End: Original strand, 13100189 - 13100487
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    ||||| ||||||||||||  ||||||||| ||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||      
T  13100189 ccattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggc 13100288  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    |||| |||| |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||  |||         
T  13100289 aaaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatatacca-tttgtaacatatatttagtat--ttattttt 13100385  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||||||| ||||||||||||||||| | ||||||||||||| |||||||| | ||  | ||||||||||||| ||||||||||||||| ||||    
T  13100386 tgggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttac 13100485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 224 - 516
Target Start/End: Complemental strand, 16125580 - 16125287
Alignment:
Q  224 tcaaaatcctgacttaaattttaaaatttaggattttgcgactttctt---caccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 320  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||   |||||||||||||  |||||||||||| ||||  |||||||  ||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  321 cattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggta 420  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||       ||||    
T  16125480 cattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatatacca-tttataacatatatttagtattatta-tttttgggta 16125383  T
Q  421 aaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |  ||||| ||||||||||||||||| |  |||||||||||| |||||||| | ||  | ||||||||||||||||||||||||||||| ||||||    
T  16125382 acgtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacga 16125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 216 - 516
Target Start/End: Complemental strand, 9955165 - 9954865
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||   |    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||          
T  9955065 aaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatatacca-tttataacatatattcagtattattatttttt 9954967  T
Q  416 ng-gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
     | ||||||||||| ||| ||||||||||||| |  ||||| |||||  |||||  | ||||  |   ||||||||||||||||||||||||||| ||||    
T  9954966 tgtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttac 9954867  T
Q  515 ga 516  Q
    ||    
T  9954866 ga 9954865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 216 - 520
Target Start/End: Complemental strand, 25146898 - 25146596
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    || | |||  ||||||||||||| |||||||||||||||||||||||| || |||||||||||| || |||||||| |||||||||||| | |           
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatata-caatttataacgtatatttagtatcaat-tttttt 25146702  T
Q  416 nggtaaaatccattgattttgattgcga-tttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
     |||||||||||| |||||||||||||| ||| |  ||||  |||||| |||||||  |||   | ||||||||||||||||||||||||||||| ||||    
T  25146701 gggtaaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttac 25146602  T
Q  515 gatttc 520  Q
    ||||||    
T  25146601 gatttc 25146596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 216 - 446
Target Start/End: Complemental strand, 9327345 - 9327116
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| |    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattattannnn 413  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||  | | ||||||||||||| ||||||| |||||||||||||||||         
T  9327245 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatatacca-tttataatatatatttagtattatt--ttt 9327149  T
Q  414 nnnggtaaaatccattgattttgattgcgattt 446  Q
       |||||||| ||| |||||||||||||||||    
T  9327148 ttgggtaaaattcatcgattttgattgcgattt 9327116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 215 - 516
Target Start/End: Complemental strand, 9352194 - 9351895
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||||| |||||||||  ||||||  ||| |||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||     
T  9352194 ccattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagac 9352095  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    ||||||| | |||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |          
T  9352094 aaaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatatacca-tttataacatatatttagtattaat-ttttt 9351997  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||| ||| ||||||||||| ||||| |  ||||| |||||  |||||||| ||||  | |  ||||||||| |||||||||||||||| ||||    
T  9351996 tgggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttac 9351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 216 - 519
Target Start/End: Complemental strand, 18304941 - 18304640
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaa-cgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||||  ||||||||  ||||||  || ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||     
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    |||||||||  ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||| |          
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatatacca-ttcataacgtatatttagtattaat-ttttt 18304745  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      | |||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  |  ||||||||||||||||||||| |||||| ||||    
T  18304744 ttgataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgattttac 18304645  T
Q  515 gattt 519  Q
    |||||    
T  18304644 gattt 18304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 217 - 471
Target Start/End: Complemental strand, 13276395 - 13276143
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| || ||||||  |||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||  ||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||| || |||||| |||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||           
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattatta-tttttt 13276198  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctaca 471  Q
    |||| | ||||| |||||||||||| |||| |  |||||||||||| ||||||||    
T  13276197 ggtatagtccatcgattttgattgcaattttacaatttcttatatcgattctaca 13276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 218 - 516
Target Start/End: Complemental strand, 42180193 - 42179903
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    |||||||||||||||  ||||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||  |||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    || ||| |||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||         |    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagtattatattttttttg 42179995  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||| ||||||||||| | ||| |  ||||| ||       |||||| ||||  |||| |||||||||||||||||||||||||| ||||||    
T  42179994 gtaaaatccatcgattttgattgtggttttacaatttccta-------tctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacga 42179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 219 - 516
Target Start/End: Complemental strand, 19010073 - 19009780
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||||||||||| |||||||||  ||||||| |||||||||||||||| ||||||||||| |||| |||||||||||| ||| | ||||||   ||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||  ||||||| |||| ||        ||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatatacca-tttataac--atatttaatatt-ttttttttgggg 19009878  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||| |||||||||||||||||| |  ||||| |||||| ||| |||| ||||  | ||||||||||||| ||||||||||||||| ||||||    
T  19009877 taaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacga 19009780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 216 - 509
Target Start/End: Complemental strand, 21846398 - 21846113
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| || ||||||  ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| |||||||||||   |||| | ||||||   ||||| ||| ||||||||  | ||||||||||||||||||||||| |           
T  21846298 aaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatata-taatttataacatatatttagtattaat-tttttt 21846207  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
     |||||||| |||  |||||||||||||||| |  |||||||||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  21846206 gggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 21846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 514
Target Start/End: Original strand, 12513283 - 12513566
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||||||||||| |||||||||  || ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||   ||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||  ||||||| ||||||         ||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatatacca-tatataac--atatttaatattat--attttttgg 12513477  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
    ||||||| || ||||||||||||||||| |  ||||||||       ||||||||||| || ||||||||||||| ||||||| ||||||| ||||    
T  12513478 taaaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttggttgcgattttac 12513566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 316 - 518
Target Start/End: Original strand, 47785958 - 47786157
Alignment:
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||           
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt--ttttg 47786054  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| |||||| ||| ||||||  ||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| ||| |||||    
T  47786055 tggtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacg 47786154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 218 - 515
Target Start/End: Complemental strand, 17869873 - 17869583
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||||||||||||| |||||     ||||||||||||||||||||||||| |||||  ||||||| |||||||||| |||||||  |||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    || | | |||||| ||||| ||||||||||||||| ||||||||||| | ||| || |||||| | |||| |||||||||||||||||||||       |    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatacta-tttacaacatatatttagtattatta-ttttttg 17869681  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
    ||||||| ||| ||||||||||||||||| |  |||| ||| ||  |||||| | ||||  | ||||||||||||| ||||||||||||||| |||||    
T  17869680 gtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgattgcgattttacg 17869583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 9128969 - 9128778
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||| ||||||  |||||||||  ||||| ||||||| |||||||||||||||| || ||||||||||||  |||||||||||  |||||||| ||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 409  Q
    ||| ||| |||||| |||||||||| ||||||||||||||||||||| || | ||||||||||||| |||||||||||| |||||||||||||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatatacca-tttataacatatctttagtattatta 9128778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 216 - 355
Target Start/End: Complemental strand, 41032800 - 41032661
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||  |||||||||  || |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||  |    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  316 aaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  41032700 aaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 518
Target Start/End: Original strand, 32881416 - 32881619
Alignment:
Q  306 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatatacca-tttataacatatatttagtatt 32881514  T
Q  406 attannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
     ||         |||||| |||||||||||||||||||||| |  |||||||||||| |||||||| | || || |||||||||||||||||||   |||    
T  32881515 ttt--------tgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgatttcagttg 32881606  T
Q  506 cgatattacgatt 518  Q
    |||| ||||||||    
T  32881607 cgattttacgatt 32881619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 350
Target Start/End: Complemental strand, 17056129 - 17055995
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||| ||||||||||||| ||||||  ||||||  |||||||||| | ||||| |||||||||||||||| ||||||||||||||   ||||||   |    
T  17056129 cattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagta 17056030  T
Q  316 aaatccattgattttaattgcgattttacgatttc 350  Q
    |||||||| |||||| |||||||||||||||||||    
T  17056029 aaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 417 - 519
Target Start/End: Original strand, 16434709 - 16434809
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||| ||||||| |||||||||||||||||  || | |||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||    
T  16434709 ggtagaatccatcgattttgattgcgattt--tgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgattgcaattttacga 16434806  T
Q  517 ttt 519  Q
    |||    
T  16434807 ttt 16434809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    |||||||||||||||| | |||||||  |||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 18228278 - 18228380
Alignment:
Q  294 tagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacat 393  Q
    |||||||||||||||||||  |||||||||  ||||| |||| ||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatatacca-tttataacat 18228375  T
Q  394 atatt 398  Q
    |||||    
T  18228376 atatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 12800710 - 12800623
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 304  Q
    |||||||| |||||||  ||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 417 - 516
Target Start/End: Complemental strand, 17055850 - 17055751
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||  ||||||||||| |||| |  ||||||| |||| |||||||| |||| || ||||||||||||||||||||||||||||| ||||||    
T  17055850 ggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacga 17055751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatcc 292  Q
    |||||||||||||||| |||||||||  ||||||  |||||||||||| |||||||||||||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 18337651 - 18337547
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||| |  | |||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||  |    
T  18337651 cattgttgtcaaaatcccgacttatacct-aaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggca 18337553  T
Q  316 aaatcc 321  Q
    ||||||    
T  18337552 aaatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 34478900 - 34478833
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacga 283  Q
    ||||||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 24117005 - 24117099
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||||||||||||| |  | ||||||| ||||||||| |||||| | ||||| |||||||||||||| ||||||  ||| |||||||||||||    
T  24117005 ccattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaatttatattagaatcccaaaa 24117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 41032701 - 41032603
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||| |||||| |||||||||| |  |||||||||||| |||||||| || | || ||||||||| ||||||||||  ||||||| ||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatt 41032603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 27917578 - 27917495
Alignment:
Q  220 gttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 303  Q
    ||||||||||||| |||||||||| | |||| ||||||||||||| ||| || ||||||||| || ||||| ||||| ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatc 27917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 27917302 - 27917240
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| | |||||||||||||||||| ||| |||||||||||||||| || ||||||||||    
T  27917302 gtaaaattcatcgattttgattgcgataatacaatttcttatatcaattatacaaaagtagtt 27917240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 13100389 - 13100440
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||    
T  13100389 gtaaaatccatcgattttgattgcgattttaagatttcttatatcgattcta 13100440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 14074397 - 14074326
Alignment:
Q  434 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
    ||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 14074326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 23528855 - 23528913
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  23528855 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 23528913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 47786057 - 47786119
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||||||| ||| |||| ||  |||||||||||||||||||| ||||||||||    
T  47786057 gtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagtt 47786119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 18304740 - 18304683
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    |||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  18304740 taaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 18304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 518
Target Start/End: Original strand, 30619156 - 30619240
Alignment:
Q  433 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    |||||||||||||| |  |||| | ||||| |||||||| |||| || ||||||||||||||||||||  ||||||| ||||||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcgat-ttacgatt 30619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 9955066 - 9955026
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttata 9955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 12513379 - 12513419
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  12513379 aaaatccatcgattttgattgcgattttacgatttcttata 12513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 18228473 - 18228525
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||| ||||||||||| ||||||||||||||||| |||||| ||||| ||||    
T  18228473 tcgatgttgattgcgattttacgatttcttatatcgattctacaaaagaagtt 18228525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 19009977 - 19009937
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  19009977 aaaatccatcgattttgattgcgattttacgatttcttata 19009937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 41032701 - 41032641
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| |||||||| |||||||| |||| |||||||||||| |||||| |||| |||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagtt 41032641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 17055849 - 17055787
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || ||||||||||| || |||| ||||||| |||| |||||| ||||||||||    
T  17055849 gtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagtt 17055787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 17056033 - 17055995
Alignment:
Q  482 agtaaaatccttcgattttgattgcgatattacgatttc 520  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  17056033 agtaaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 21846204 - 21846146
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||| | || |||||||||||||| |||| |||||||||||| |||||| ||||||    
T  21846204 gtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagt 21846146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 27502273 - 27502239
Alignment:
Q  275 cttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||||||||||||||||||| ||||||||||||    
T  27502273 cttcaacgactcaaatccatagcagaatcccaaaa 27502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 32881531 - 32881581
Alignment:
Q  495 gattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||| ||||||    
T  32881531 gattttgattgcgattttacaatttcttatatcgattctacaaacgtagtt 32881581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 534
Target Start/End: Complemental strand, 16125375 - 16125334
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||||||||||||| |||| |||||||||||| ||||||    
T  16125375 tcgattttgattgcgattttacaatttcttatatcgattcta 16125334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 9128871 - 9128831
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  9128871 aaaattcatcgattttgattgcgatttgacgatttcttata 9128831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 9321599 - 9321567
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||||||||||||||||| ||||||    
T  9321599 taaaatccttcgattttgattgcgattttacga 9321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 9352094 - 9352054
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| ||| |||||||||||    
T  9352094 aaaatccgtcgattttgattgcgattttatgatttcttata 9352054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 12003289 - 12003241
Alignment:
Q  220 gttgtcaaaatcctgacttaaattttaaaatttaggattttgcgacttt 268  Q
    ||||||||||||| ||||||| |||||||||| ||| ||||| ||||||    
T  12003289 gttgtcaaaatcccgacttaagttttaaaattcaggtttttgtgacttt 12003241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Complemental strand, 13276289 - 13276257
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  13276289 tcgattttgattgcgattttacgatttcttata 13276257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 32881433 - 32881465
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  32881433 tcgattttgattgcgattttacgatttcttata 32881465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 5e-79; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 5362093 - 5361795
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||           
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttt-taacatatatttagtattttt---cttt 5361898  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     ||| |||||||| || |||||||||||||| | |||||| |||||| |||||||| |||| || |||||||| |||||||||||| |||| || |||||    
T  5361897 tggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgtttgcaattttacg 5361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 36120823 - 36121120
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||| | ||||||   |    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||| ||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||          
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatatacca-tttataaaatatatttagtattatta--tttt 36121019  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| || ||||| ||||  | |||||||||| ||||||||||||| |||| |||||    
T  36121020 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacg 36121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 10142898 - 10143199
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| ||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||| ||||||| ||||||||| ||| |||||||||| |    
T  10142898 cattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagaca 10142997  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| |||| |||||||||||||||||||||  ||||||| |||||||||||||||  |||||| |||||||||||||||||           
T  10142998 aaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatatacca-attataatatatatttagtattattttttttt 10143096  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     | ||||||||||  |||||||||||||||| |  || ||||||||| |||||||| || | || || |||||||||||||||||||||||||| |||||    
T  10143097 tgataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgattgcgattttacg 10143196  T
Q  516 att 518  Q
    |||    
T  10143197 att 10143199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 219 - 516
Target Start/End: Original strand, 5375666 - 5375962
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    ||||||||||||||  || |||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||   |||||||| ||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    | ||| || ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||| |        ||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatca-tttataacatatatttagtattaattttttttggg 5375864  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||  |||||||||||||  | ||||||||||||||||||||||||||||| ||||||    
T  5375865 taaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgattgcgattttacga 5375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 9770112 - 9770409
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||| ||||||  |||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||| ||  ||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| |            
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatatacca-ttcataacatatatttagtattaat-ttttttg 9770309  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| |||   | ||||||||||||||||||||||||||||| ||||||    
T  9770310 ggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgattgcgattttacga 9770409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 217 - 516
Target Start/End: Complemental strand, 9911541 - 9911243
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattt-taaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||| || ||||| |  ||||||| | |||||||| ||||||||||||||||||| |  |||||||||||||||||| ||||| |  |    
T  9911541 attgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggca 9911442  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||          
T  9911441 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaagtattatta-ttttt 9911344  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||| ||||| ||||||||||||||||| |  |||||||||||| |||||||| ||||  ||||||||||||||||| |||| |||||||| |||||    
T  9911343 tggtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacg 9911244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 216 - 406
Target Start/End: Original strand, 13023566 - 13023758
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaa-tttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc--aaaatag 312  Q
    |||||||||||||||||  ||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  313 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 406  Q
    | |||||| || |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatatacca-tttataacatatatttagtatta 13023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 218 - 518
Target Start/End: Original strand, 17466080 - 17466378
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||| |  |||||||| ||||||||||||||||||||| |||||||| ||| || |||||||||||||| |||||||| ||||||   |||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    |||||| |||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||             
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatatacca-tttataacatatatttaatattatt-tttttgtt 17466277  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 517  Q
    ||||||||||| |||||||||||| |||| |  |||||||||||| |||| ||| |||| || ||||| |||| ||| |||||| |||| || |||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttgtttgcaattttacgat 17466377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 216 - 516
Target Start/End: Complemental strand, 23065093 - 23064793
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||| || |||||||||| ||||||  || ||||||  ||||||||||| ||||||||||||||||||| ||||||| | |||||||       
T  23065093 cattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtc 23064994  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaac--taagtcatctatgactatataccattttataacatatatttagtattattannnn 413  Q
    |||||||| |||||||||||| |||||||||||||||||||||  |||||||| ||||||  |||| || ||||||||||||||||||||||||||        
T  23064993 aaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatca-tttataacatatatttagtattatta-ttt 23064896  T
Q  414 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 513  Q
       |||||||||  | |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | || ||||||||||| |||||||||||||| |||    
T  23064895 tttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgattgcgatttta 23064796  T
Q  514 cga 516  Q
    |||    
T  23064795 cga 23064793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 215 - 405
Target Start/End: Original strand, 8889226 - 8889415
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||| ||||||||||| |||||||||  ||||||  ||||||||| || |||||||||| |||||||||||||| |||| ||||||||||||||||      
T  8889226 ccattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggc 8889325  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  8889326 aaaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatatacca-tttataatatatatttagtatt 8889415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 13551752 - 13551602
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||  |||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||| |    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcat 366  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13551652 aaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 13551602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 216 - 518
Target Start/End: Original strand, 37240261 - 37240538
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| |||||||  ||||||||  ||||||||||    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggca 37240355  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
     ||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||          
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctatacca-tttatatcatatatttagtattattat----- 37240449  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttc-ttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
                   |||||||||| ||||| | |||||| ||||||| |||||||| |||| || ||||||||||||||||||||||||||||| ||||    
T  37240450 ---------------attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttac 37240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 217 - 350
Target Start/End: Complemental strand, 8011345 - 8011212
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    ||||||||||||||||  ||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  317 aatccattgattttaattgcgattttacgatttc 350  Q
    ||| ||| |||||| ||||||||||| |||||||    
T  8011245 aattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    |||||||||||||||| ||||||||| |||||||||||||||||  |||||| |||||||| |||||||||||||  ||||||||||| ||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 24719516 - 24719610
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaat 310  Q
    ||||||||||||||||  ||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    ||||||||||||||| |||||||||  ||||||  | |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 354 - 516
Target Start/End: Complemental strand, 8011129 - 8010968
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||||| |||| ||| | ||||||| |||| ||||||||||||||| ||||||        |||||||| ||| ||||||||||||||||| |  |||    
T  8011129 taaactaattcatttataattatatacaattt-ataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatt 8011031  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||| |||||| | || | || ||||||||||||||||||||||||||||| ||||||    
T  8011030 tcttatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacga 8010968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 421 - 519
Target Start/End: Complemental strand, 6346882 - 6346784
Alignment:
Q  421 aaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||||| ||||||||||||||||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||| ||| |||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattt 6346784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 519
Target Start/End: Original strand, 24719725 - 24719875
Alignment:
Q  368 tatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattc 467  Q
    ||||||||||||| |||| ||||||||||||||  ||||||        |||||||  ||| ||||||||||||||||| | ||||||||||||| ||||    
T  24719725 tatgactatatacaattt-ataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattc 24719823  T
Q  468 tacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||| ||||  |||||||||||||||||||| ||||| |||| || ||||||    
T  24719824 tacaaaagtaatcgagtaaaatccttcgattgtgatttcgatttttcgattt 24719875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||| ||||||| |||| ||||  ||||||  | |||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||  |    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  316 aaatcc 321  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 7044961 - 7045053
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||||| |||||||||||  |||| | ||||||||||||| ||| | || |||| || |||||||||| ||||||||||||||||||    
T  7044961 ggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattgcgat 7045053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 7452419 - 7452499
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagt 297  Q
    ||||||||| ||||||| |||||||||| ||||||  || ||||||| ||||| ||||||||||||||||| ||||||||||    
T  7452419 cattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagt 7452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 320  Q
    |||| ||||||| |||||||||  ||||||  || |||||| |||||| |||| ||| | ||||||||| ||||||||||||||||||||||  ||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  321 c 321  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 505
Target Start/End: Complemental strand, 9149709 - 9149565
Alignment:
Q  361 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttg-atgatttcttat 459  Q
    |||||| ||| ||||||||| |||| ||||||||||||||| ||||||        ||||||||| ||  |||||||||||| |||  | ||||||||||    
T  9149709 agtcatttataactatatacaattt-ataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttat 9149611  T
Q  460 atcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
    ||| |||||||  |||| || |||||||||||||| ||||||||||    
T  9149610 atcgattctacgaaagtagttgagtaaaatccttcaattttgattg 9149565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 6347194 - 6347088
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||| |||||||||| |  ||||||||  ||||||  |||||||||| ||||| || ||||||||||||||||||||||||  || || ||||||||  |    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggta 6347095  T
Q  316 aaatcca 322  Q
    |||||||    
T  6347094 aaatcca 6347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 8011066 - 8011004
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||| ||||||||||| |||||    
T  8011066 gtaaaatacatcgattttgattgcgattttacaatttcttatatcgattctataaaaatagtt 8011004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 10394824 - 10394910
Alignment:
Q  433 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||  |||| | |||||| |||| | |||||||| |||| || ||||||| ||||||||||||||||||||| |||||||||    
T  10394824 tttgattgtaattttacgatttcctataccgattctacaaaagtagttgagtaaagtccttcgattttgattgcgattttacgattt 10394910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 454 - 516
Target Start/End: Original strand, 55476223 - 55476285
Alignment:
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  55476223 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 55476285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 9149864 - 9149791
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaat 290  Q
    ||||| |||||||||| |||||||||  |||||||||||||||||||||||| |  |||||||| || ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttatctaccttcaaagaatcaaat 9149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 18459530 - 18459461
Alignment:
Q  449 tgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||||||||||||||||| || | ||  ||| ||||||||||||||| |||||||| ||||||||    
T  18459530 tgatttcttatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgatt 18459461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 24719784 - 24719833
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagta 542  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  24719784 tcgattttgattgcgattttacgatttcttatatcgattctacaaaagta 24719833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 5361892 - 5361833
Alignment:
Q  486 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||| |||| |||||||||||| |||||||||| |||||| |||||| ||||||||||    
T  5361892 aaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagtt 5361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 6346882 - 6346823
Alignment:
Q  486 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||| ||||||||||||||||| |||| |||||||||||  |||||| ||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagtt 6346823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 354 - 519
Target Start/End: Original strand, 7045078 - 7045244
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||| ||||||||| | || ||||||||||||||  ||||||        ||||| |||||| |||||||||||  |||| | ||||    
T  7045078 taaactgagtcatttatcactatatacaaatt-ataacatatatttaacattatttttgttttggtaagatccatagattttgattgatattttacgatt 7045176  T
Q  454 tcttatatca--attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||||||   |||||  | |||  || ||||||||||||||||||||||||||||| ||| |||||    
T  7045177 tcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgattt 7045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 519
Target Start/End: Original strand, 7452707 - 7452805
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||| ||||||  ||| | ||| | |||||| |||||  |||||||| |||| || ||||||| ||||||||||||||||||||| |||||||||    
T  7452707 aaaatccatcgattttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagtaaa-tccttcgattttgattgcgattttacgattt 7452805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 9911341 - 9911283
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  9911341 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 9911283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 17466278 - 17466340
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||||||||||||| || |||| |||||||||||| |||| | ||||||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagtt 17466340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 18327342 - 18327415
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaa 289  Q
    ||||||||||||||||  || |||| | | |||||||||||||||||||||||  | | |||||||||||||||    
T  18327342 cattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 18438055 - 18437982
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaa 289  Q
    ||||||||||||||||  || |||| | | |||||||||||||||||||||||  | | |||||||||||||||    
T  18438055 cattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18437982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 522
Target Start/End: Original strand, 4157050 - 4157090
Alignment:
Q  482 agtaaaatccttcgattttgattgcgatattacgatttctt 522  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  4157050 agtaaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 9911442 - 9911402
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  9911442 aaaatccatcgattttgattgcgattttacgatttcttata 9911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 5943166 - 5943088
Alignment:
Q  441 cgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||| | ||||||||| | | |||||||| |||| || |||||||||||||| |||||  ||||||| |||||||||    
T  5943166 cgattttacgatttcttaaaccgattctacaaaagtagttgagtaaaatccttcaattttacttgcgattttacgattt 5943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 7044962 - 7045024
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||||||||||||  || ||||||||||||||||| ||| |  ||||||||||    
T  7044962 gtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagtt 7045024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 23064891 - 23064833
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    |||||||| ||||||||||||||| || |||| ||||| |||||| |||||| ||||||    
T  23064891 gtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagt 23064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 36121022 - 36121080
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| || ||| ||||||    
T  36121022 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagt 36121080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttctt 352  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 10143100 - 10143161
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||||| || |||||||||||||| |||| || ||||||||| |||||| |||| |||||    
T  10143100 taaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagtt 10143161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 516
Target Start/End: Complemental strand, 13551541 - 13551504
Alignment:
Q  479 tcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  13551541 tcgagtaaaatccttcgattttaattgcgattttacga 13551504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 526
Target Start/End: Original strand, 36120930 - 36120963
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatat 526  Q
    ||||||||||||||||| ||||||||||||||||    
T  36120930 tcgattttgattgcgattttacgatttcttatat 36120963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 7803070 - 7803110
Alignment:
Q  281 cgactcaaatccatagtagaatcccaaaatagaaaaaatcc 321  Q
    ||||||||| |||||| |||||||||||||||| |||||||    
T  7803070 cgactcaaacccatagcagaatcccaaaatagacaaaatcc 7803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 8889334 - 8889366
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  8889334 tcgattttgattgcgattttacgatttcttata 8889366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 10142997 - 10143037
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  10142997 aaaatccatcgattttgattgtgattttacgatttcttata 10143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 13551653 - 13551613
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttata 13551613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 37240363 - 37240395
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  37240363 tcgattttgattgcgattttacgatttcttata 37240395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 3e-77; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 11879599 - 11879897
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||| |||||||||||  ||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||| ||    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||          
T  11879699 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-ttttt 11879796  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||||||| |||||    
T  11879797 tggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacg 11879896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 11897015 - 11897313
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||| |||||||||||  ||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||| ||    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||          
T  11897115 aaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-ttttt 11897212  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||||||| |||||    
T  11897213 tggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacg 11897312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 219 - 509
Target Start/End: Original strand, 15294672 - 15294959
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||| ||||||| |||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||  ||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||        ||    
T  15294772 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--tttttagg 15294868  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15294869 taaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 15294959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 219 - 509
Target Start/End: Original strand, 15475041 - 15475328
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||| ||||||| |||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||  ||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 418  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||        ||    
T  15475141 tccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--tttttagg 15475237  T
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | |||||||||||||||||||||||||||||    
T  15475238 taaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 15475328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 215 - 509
Target Start/End: Original strand, 5922047 - 5922338
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||||| |||||||||  ||||||  ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||     
T  5922047 ccattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagac 5922146  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||| || ||||||||||||||||||||  |         
T  5922147 aaaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtatta-aattttt 5922244  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
      |||||||||||| || || ||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  5922245 tgggtaaaatccatcga-ttagattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 5922338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 218 - 518
Target Start/End: Complemental strand, 29384444 - 29384142
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||| |  ||||||  |||||| |  |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  |||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaa 29384345  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta----ttannnn 413  Q
    || ||| || ||| ||||||||||||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||||    ||         
T  29384344 attcatcga-tttgattgcgattttacgatttcttataaaacaattcatttatgactatatacca-tttataacatatatttagtattagtatttttttt 29384247  T
Q  414 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 513  Q
       |||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||| || ||||||||||||||||||||| ||||||| |||    
T  29384246 tttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgcgatttta 29384147  T
Q  514 cgatt 518  Q
    |||||    
T  29384146 cgatt 29384142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 216 - 405
Target Start/End: Original strand, 31424162 - 31424350
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||  |    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatatacca-attataacatatatttagtatt 31424350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 45403029 - 45403326
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||  |||||||||| ||||||  | ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||   ||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||||||| |||||| ||||||||||||||||| ||||| ||| ||||||| |||||  |||||||| ||||||||||||||||| ||||||||           
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatatacca-tttataacatatatttaatattattattttttt 45403227  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||| || ||||||||||||| ||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||||||| ||||||    
T  45403228 ggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgattgcgattttacga 45403326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 219 - 516
Target Start/End: Complemental strand, 19704583 - 19704289
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaattta-ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||  |||||||| |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||| || ||        |    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatatacca-tttgtaacatatatttagttttttt---ttttag 19704388  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||| ||||||||||| ||||| | ||||||  ||||| ||||||||  |||  | ||||||| ||||| ||||||||||||||| ||||||    
T  19704387 gtaaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgattgcgattttacga 19704289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 266 - 518
Target Start/End: Original strand, 23142224 - 23142473
Alignment:
Q  266 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 365  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| |||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  366 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 465  Q
    | ||||||||||||||| ||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||| |  |||||||||||| ||    
T  23142324 tttatgactatatacca-tttataacatatatttagtattatta--tttttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgat 23142420  T
Q  466 tctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    |||||| ||||  | || ||||||| ||||||||  |||||||| ||||||||    
T  23142421 tctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgatt 23142473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 518
Target Start/End: Original strand, 17646993 - 17647296
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||| | |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattatta-nnnn 413  Q
    ||| ||| |||||| ||||  |||| ||||||||||||||||  |||||  | | | | ||||||||| ||| ||| ||||||||| | ||||||         
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatatacca-tttgtaaaatatatttaatgttattattttt 17647191  T
Q  414 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatta 513  Q
       | |||||||||| ||||||||||||||||| |  |||||||||||| |||||||| || | || ||||||||||||||||||||||||||||| |||    
T  17647192 tttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatttta 17647291  T
Q  514 cgatt 518  Q
     ||||    
T  17647292 tgatt 17647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 256 - 518
Target Start/End: Original strand, 6810861 - 6811118
Alignment:
Q  256 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacgatttcatata 6810959  T
Q  356 aactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttc 455  Q
    ||||||||||| ||| |||||||| || |||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    |||||    
T  6810960 aactaagtcatttataactatatatca-tttataacatatatttagtattatt--ttttttggtaaaatccatcgattttgattgcgattt-tcaatttc 6811055  T
Q  456 ttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||| |||||||| |||| || || |||||| ||||||||||| ||||||| ||||||||    
T  6811056 ttatatctattctacaaaagtagttgattaaaattcttcgattttggttgcgattttacgatt 6811118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 22910332 - 22910033
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||| ||| || |||| |||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||  |||||||  |    
T  22910332 cattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggca 22910233  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||||| || |           
T  22910232 aaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatatacca-tttataacatatacttagtactact--ttttt 22910136  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     | ||||   ||| || |||||||||||||| | ||||||||||||| |||||||| || | || || ||||||||||| |||| | ||||||| |||||    
T  22910135 tgttaaacatcatcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacg 22910036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 221 - 405
Target Start/End: Complemental strand, 3094378 - 3094185
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 320  Q
    ||||||||||   ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  321 cattgattttaattgcgattttacgatttct----------tataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    ||| |||||| |||||||||||||||||| |          ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 3094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 265 - 516
Target Start/End: Complemental strand, 7489368 - 7489115
Alignment:
Q  265 ctttcttcaccttcaacgactcaaatccatagtagaatcc----caaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaacta 360  Q
    ||||||||||||||||||||| |||||| ||||||||| |     |||||||| |||||  || |||||| ||||| |||||| ||||||||||||| ||    
T  7489368 ctttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaatagacaaaatttatcgattttgattgcaattttatgatttcttataaatta 7489269  T
Q  361 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    |||||| |||||||||||| || ||||||||||||||||||||||| ||        ||||||| ||| ||||||||||||||||| |  ||||  ||||    
T  7489268 agtcatttatgactatatatca-tttataacatatatttagtattaatatttttga-gtaaaattcatcgattttgattgcgattttacaattttctata 7489171  T
Q  461 tcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    || |||||||| ||||  | |||||||||||| |||||||||||||||| ||||||    
T  7489170 tcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacga 7489115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 236 - 516
Target Start/End: Original strand, 32424354 - 32424631
Alignment:
Q  236 cttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattg 335  Q
    |||||||| ||||||||||||||||  |||||| ||||   | ||||| |||||| ||||||||||||| |||||||| |||||  || |||||| ||||    
T  32424354 cttaaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattg 32424450  T
Q  336 cgattttacgatttcttataaactaagtcatctatgactatataccattttataac--atatatttagtattattannnnnnnggtaaaatccattgatt 433  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||  ||||||||||||||| |        | ||||||| || ||||    
T  32424451 cgattttacgatttattatatactaagtcatttatgactatatacca-tttataacatatatatttagtattaat-ttttctggataaaatctatcgatt 32424548  T
Q  434 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    || |||||||||| |  ||||| ||| || |||||||| || |  | |||||||||||||||||||| |||||||| ||||||    
T  32424549 tttattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacga 32424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 215 - 405
Target Start/End: Complemental strand, 27836595 - 27836406
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||| |  ||||| ||  ||||||| |||||||||||  ||| |||||||||||| ||| |||||||||||||||| | ||||||       
T  27836595 ccattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagc 27836496  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    ||||| |||  ||||| ||| | ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  27836495 aaaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatatacca-tttataacatgtatttagtatt 27836406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 221 - 407
Target Start/End: Complemental strand, 6292467 - 6292282
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 320  Q
    |||| ||||| | ||||||||| |||||||||| ||||||| |||||| |||| ||| ||||||||||| |||||||| ||| | ||||||  ||||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  321 cattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 407  Q
    ||  |||||| |||||| | |||| |||| |||||| ||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatatacca-tttataaaatatatttaatattat 6292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 9212295 - 9212202
Alignment:
Q  306 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta 400  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||| ||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatatacca-tttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 15761322 - 15761188
Alignment:
Q  384 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 483  Q
    |||||||||||||||||| ||||||        |||||||||||| ||||||||||||||||| |  | |||||||||| |||||||| ||||  | |||    
T  15761322 tttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgag 15761223  T
Q  484 taaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||||||||||  |||||||| ||||||||    
T  15761222 taaaatccttcgatttatattgcgattttacgatt 15761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||| |||||||| ||||||||||  ||||||  |||||||||||||||| ||||| || ||||||||||||||||||   |||||||||||||| |    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  316 aaatc 320  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatcc 292  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||| |||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 29384242 - 29384180
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  29384242 gtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagtt 29384180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 15761570 - 15761473
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    |||||||||||||||||  |||||||||  |||| |  ||||||||| || ||| || |||||||||||||||||| ||||| | |||||||||||||    
T  15761570 ccattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaatag 15761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 434 - 519
Target Start/End: Original strand, 17566313 - 17566398
Alignment:
Q  434 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| |||||||||||||||| || |||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattt 17566398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 8582242 - 8582304
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||| | |||||||||||||  || |||||||||||||||||||||||| ||||||||||    
T  8582242 gtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagtt 8582304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 516
Target Start/End: Complemental strand, 24414217 - 24414119
Alignment:
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||| |||||| |||||||  ||||| |  ||||| |||||| |||||||| || |  | ||||||||||||||||||||||||||||| ||||||    
T  24414217 gtaaaattcattgaatttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacga 24414119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 490
Target Start/End: Original strand, 8582241 - 8582314
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatc 490  Q
    |||||||| ||| |||||||||||  |||| | |||||||||||||||||||||| |||| || ||||||||||    
T  8582241 ggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 17647197 - 17647258
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||||| ||||||||||||||||| |||| |||||||||||| |||||| |||| |||||    
T  17647197 taaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagtt 17647258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 17788436 - 17788372
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaa 280  Q
    ||||||||||||||||   |||||||||||||||| |||||||||| ||||||  ||||||||||    
T  17788436 cattgttgtcaaaatcgcaacttaaattttaaaatctaggattttgagactttactcaccttcaa 17788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 542
Target Start/End: Complemental strand, 15761288 - 15761229
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagta 542  Q
    ||||||||| ||||||||||||||||| |||| | |||||||||| |||||| |||||||    
T  15761288 gtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagta 15761229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 6811019 - 6811080
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| || | |||||||||||| |||||| ||||||||||    
T  6811019 gtaaaatccatcgattttgattgcgatttt-caatttcttatatctattctacaaaagtagtt 6811080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 23142373 - 23142431
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  23142373 gtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 23142431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 518
Target Start/End: Original strand, 15231835 - 15231920
Alignment:
Q  433 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    |||||||||||||| |  |||| ||||||| |||||||| |||| || |||||||||| | |||||||  ||||||| ||||||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaaatcgtacgattttagttgcgattttacgatt 15231920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 419 - 504
Target Start/End: Complemental strand, 24056499 - 24056414
Alignment:
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 504  Q
    ||||||| || |||| |||||||||||| |  |||| ||||||  |||||||| || | || ||||||||||||||||||||||||    
T  24056499 taaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgattttgatt 24056414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 22910123 - 22910071
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||| |||||||||||| ||||||||||||||||| |||||| |||| |||||    
T  22910123 tcgactttgattgcgattttacgatttcttatatcgattctacaaaaatagtt 22910071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 31424261 - 31424301
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31424261 aaaatccattgattttgattgcgattttacgatttcttata 31424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 516
Target Start/End: Original strand, 2040381 - 2040416
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2040381 gagtaaaatccttcgattttgattgcgattttacga 2040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 516
Target Start/End: Complemental strand, 27836166 - 27836131
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27836166 gagtaaaatccttcgattttgattgcgattttacga 27836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 11879799 - 11879857
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| |||||||||| |||||| |||| ||||  |||||| |||||||||||||    
T  11879799 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagt 11879857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 11897215 - 11897273
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| |||||||||| |||||| |||| ||||  |||||| |||||||||||||    
T  11897215 gtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagt 11897273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 15231752 - 15231862
Alignment:
Q  245 taaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttac 344  Q
    |||| |||| ||||||||||  ||||||||||||||||||| |||| |||| || ||||  |||||||  ||||||||     ||| |||||||||||||    
T  15231752 taaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcgattttac 15231851  T
Q  345 gatttcttata 355  Q
     |||| |||||    
T  15231852 aattttttata 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 31424366 - 31424463
Alignment:
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgat 517  Q
    |||||||| || ||||| |||||| |||| |  ||||||||||||||||| |||  ||| || ||||||||||||    ||||||||||||| |||||||    
T  31424366 gtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaatcct---gttttgattgcgattttacgat 31424462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 516
Target Start/End: Complemental strand, 40541714 - 40541652
Alignment:
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||| |||||||||||||  | || ||||||| ||| |||||||||||||| ||||||    
T  40541714 tcttatatcgattctacagaagtccttgaataaaatctttcaattttgattgcgattttacga 40541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 23136347 - 23136396
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcga 264  Q
    ||||| |||||||||||| |||||||||  ||||||| ||||||||||||    
T  23136347 ccattattgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 5922147 - 5922187
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  5922147 aaaatccatcgattttgattgcgattttgcgatttcttata 5922187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 541
Target Start/End: Complemental strand, 7489215 - 7489155
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| | ||||||||||||||||| |||| ||||  |||||| |||||| ||||||    
T  7489215 gagtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagt 7489155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgc 262  Q
    |||||||||||| ||||||||||||  ||||||| ||||||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 9212286 - 9212246
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| ||| |||||||||||    
T  9212286 aaaatccatcgattttgattgcgattttaagatttcttata 9212246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 9212286 - 9212246
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9212286 aaaatccatcgattttgattgcgattttaagatttcttata 9212246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 11879706 - 11879738
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  11879706 tcgattttgattgcgattttacgatttcttata 11879738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 11897122 - 11897154
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  11897122 tcgattttgattgcgattttacgatttcttata 11897154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 15294768 - 15294808
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||| ||||||||||    
T  15294768 aaaatccatcgattttgattgcgattttacaatttcttata 15294808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 15475137 - 15475177
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||| ||||||||||    
T  15475137 aaaatccatcgattttgattgcgattttacaatttcttata 15475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 16752264 - 16752320
Alignment:
Q  460 atcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| || |  | ||||||||||||||||||||| ||||||| ||||||    
T  16752264 atcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacga 16752320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 19704486 - 19704446
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  19704486 aaaatccatcgattttgattgcaattttacgatttcttata 19704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 23142281 - 23142313
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  23142281 tcgattttgattgcgattttacgatttcttata 23142313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 31424261 - 31424301
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| | ||||||||||||||| |||||||||||||||    
T  31424261 aaaatccattgattttgattgcgattttacgatttcttata 31424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 217 - 509
Target Start/End: Original strand, 43234868 - 43235158
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    ||||||||||||||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||| ||| ||||||||           
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaacca-tttataacatatacttactattatta-tctttt 43235065  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    ||||||||| || ||||||||||||||||| |  |||| ||||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  43235066 ggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 43235158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 215 - 518
Target Start/End: Complemental strand, 21059286 - 21058986
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||||| || ||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||      
T  21059286 ccattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggc 21059188  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||| ||          
T  21059187 aaaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaacca-tttataacatatatttagtattttt--tttt 21059091  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagt-aaaatccttcgattttgattgcgatatta 513  Q
       ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||  ||| |||||| |||||||||| ||||||| |||    
T  21059090 gttgtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttggttgcgatttta 21058991  T
Q  514 cgatt 518  Q
    |||||    
T  21058990 cgatt 21058986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 218 - 516
Target Start/End: Original strand, 18843716 - 18844012
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||| ||||| | |||||||||  || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    || ||| |||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |        |    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatatacca-tttataacatatatttagtattaat-ttttttgg 18843913  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||| ||||||||||||||||| |  ||||| |||||  |||||||| ||||  | ||||||||| || |||||||||||||||| ||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacga 18844012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 216 - 509
Target Start/End: Original strand, 19578941 - 19579233
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||| |  ||||||||  ||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   |    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||           
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttacca-ttcataacatatatttggtattattttttttt 19579139  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
     |||||||||||| ||||||||||||||||| |  ||||  |||| | |||||||| ||||  | |||| ||||||||||||||||||||||||    
T  19579140 tggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgat 19579233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 218 - 509
Target Start/End: Complemental strand, 23172560 - 23172267
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  318 ----atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 413  Q
        ||| || |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||| |         
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatatacca-tttgtaacatatatttaatattaat-tttt 23172363  T
Q  414 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
       |||||||| ||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||| ||||    
T  23172362 ttgggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgattacgat 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 216 - 509
Target Start/End: Complemental strand, 18051660 - 18051372
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||  |    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||   | ||||||||||||||||||||||||||          
T  18051560 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atat---aatttataacatatatttagtattatta-ttttt 18051466  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
     ||| |||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  |  | |||||| ||| |||||||||||||||    
T  18051465 tggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaattctttgattttgattgcgat 18051372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 225 - 519
Target Start/End: Complemental strand, 27340307 - 27340016
Alignment:
Q  225 caaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccatt 324  Q
    |||||||| |||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||  ||||| |||     
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  325 gattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta--nnnnnnnggtaaa 422  Q
    |||||| |||| |||||||  |||||||||||||||||||||     ||||||||||||||  ||||||||||||||||||||||          |||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttg-taacatatatttagtattattattatttttttgtaaa 27340113  T
Q  423 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||| || ||||||||||||||||| |  ||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||| | |||||||    
T  27340112 atctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttcacgattt 27340016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 217 - 509
Target Start/End: Complemental strand, 38158383 - 38158103
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||| | |||||||||  |||||| |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||| ||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||||||||||||||  |||  |||||||||||||||||||||||| |||| ||||||||          |||||||||||||||||||||||            
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgacta----------tataacatatatttagtattatt--tttttt 38158196  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    ||||||||||||  |||||||||| ||||| |  |||||||| ||  |||||||| || | || ||||||||||||||||||||| |||||||    
T  38158195 ggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttggttgcgat 38158103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 266 - 409
Target Start/End: Original strand, 19979648 - 19979790
Alignment:
Q  266 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 365  Q
    |||||||| |||||||||||||||| ||| |||||||||||||| |   ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  366 tctatgactatataccattttataacatatatttagtattatta 409  Q
    | ||||||||||||||| ||||||||||||||||| ||||||||    
T  19979748 tttatgactatatacca-tttataacatatatttattattatta 19979790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 266 - 509
Target Start/End: Original strand, 20320992 - 20321233
Alignment:
Q  266 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 365  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||  | ||| ||||||||||||||| ||||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  366 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 465  Q
    | |||||| ||||| || ||||||||||||||||| ||||| |        |||||||||||| ||||||||||||||||| |  ||||| |||||  ||    
T  20321091 tttatgaccatatatca-tttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagat 20321189  T
Q  466 tctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||| ||||  |  ||||||||||||| ||||||||||||||    
T  20321190 tctacaaaagtccttcagtaaaatccttcaattttgattgcgat 20321233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 214 - 383
Target Start/End: Complemental strand, 22645851 - 22645681
Alignment:
Q  214 gccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    ||||||||||||||||||| |||||||||  ||||||  || |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||      
T  22645851 gccattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataag 22645752  T
Q  314 aaaaatccattgattttaattgcgattttacgatttcttataaactaa-gtcatctatgactatataccat 383  Q
     ||| |||||  ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  22645751 taaattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 254 - 509
Target Start/End: Complemental strand, 41688757 - 41688505
Alignment:
Q  254 ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttctta 353  Q
    ||||||||| | |||||||||||||||||||| ||||  |||||| ||| | ||||||   ||||| ||| |||||| ||||||||||||||||||||||    
T  41688757 ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgattgcgattttacgatttctta 41688658  T
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||        |||||||| ||| ||||||||||||||||| |  |||    
T  41688657 taaactaaatcatttataactatatacca-ttcataacatatatttagtattatt--ttttttggtaaaattcatcgattttgattgcgattttacaatt 41688561  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |  |||||| |||||||| ||||  |  |||||||||||||||||||| |||||||    
T  41688560 ttctatatcgattctacaaaagtccttaagtaaaatccttcgattttggttgcgat 41688505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||  ||||||  || |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||  ||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  317 aatccattgattttaattgcgatttt 342  Q
    | ||||| |||||| |||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatc 291  Q
    ||||||||||||||  ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 519
Target Start/End: Complemental strand, 43005823 - 43005688
Alignment:
Q  384 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 483  Q
    |||||||||||||||||| ||||||        |||| ||||||| |||||| |||||||||| | |||||| |||||| |||||||| |||  || |||    
T  43005823 tttataacatatatttagcattatttttgttttggtacaatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgag 43005724  T
Q  484 taaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||| ||| |||||||||||||| |||| ||||    
T  43005723 taaaatctttcaattttgattgcgattttacaattt 43005688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 24106645 - 24106714
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaat 290  Q
    ||||||||||||||| ||||||  ||||||| |||||||||| ||||||||||||  |||||||||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 505
Target Start/End: Original strand, 26021464 - 26021605
Alignment:
Q  361 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    |||||| ||||||||||||| |||| ||||||||||||||| |||||||       |||||||| ||| |  ||| |||| ||||| | |||||||||||    
T  26021464 agtcatttatgactatatacaattt-ataacatatatttagcattattattgttttggtaaaatgcatcg--tttaattgtgattttacgatttcttata 26021560  T
Q  461 tcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
    || ||  |||| |||| || |||||||||||| ||||||||||||    
T  26021561 tcgatgttacacaagtagttgagtaaaatcctacgattttgattg 26021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 516
Target Start/End: Original strand, 41427657 - 41427716
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||||||| ||||||    
T  41427657 tatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacga 41427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 21059087 - 21059025
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||    
T  21059087 gtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagtt 21059025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacga 283  Q
    ||||||||||||||  || |||||  ||||||||| |||||||| ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 27340117 - 27340059
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||  ||||||||||||||||| |||  ||||||||||||||||||| ||||||    
T  27340117 gtaaaatctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagt 27340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 24648240 - 24648309
Alignment:
Q  450 gatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||| ||||||  |||||||| |||| || ||||||||||||| |||||||||| |||| |||||||||    
T  24648240 gattttttatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattt 24648309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 15051981 - 15051929
Alignment:
Q  464 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  15051981 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 15051929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 24647938 - 24647990
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgacttt 268  Q
    ||||||||||||||| | ||||||||| |||||||||| ||| ||||||||||    
T  24647938 cattgttgtcaaaattccgacttaaatcttaaaatttaagatattgcgacttt 24647990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 505
Target Start/End: Original strand, 19377838 - 19377889
Alignment:
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
    ||||||||| |||||||| ||||  | |||||||||||||||||||||||||    
T  19377838 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattg 19377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 18843914 - 18843972
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagt 18843972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  316 aaatccattgattttaattgcgattttacgatttcttataaac 358  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 20321142 - 20321200
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||  |||||| ||||||    
T  20321142 gtaaaatccatcgattttgattgcgattttacaatttcctatatagattctacaaaagt 20321200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 23172358 - 23172300
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||| | ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  23172358 gtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 23172300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 43005785 - 43005747
Alignment:
Q  317 aatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  43005785 aatccatcgattttaattgcgattttacgatttcctata 43005747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 43235067 - 43235125
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||  ||||||||||||||||| |||| |||| ||||||| |||||| ||||||    
T  43235067 gtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagt 43235125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 18051561 - 18051521
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||||||  ||||||||||||||    
T  18051561 aaaatccatcgattttgattgcgattgtacgatttcttata 18051521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Complemental strand, 19042441 - 19042409
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  19042441 tcgattttgattgcgattttacgatttcttata 19042409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 19377084 - 19377148
Alignment:
Q  245 taaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||||| || |||||||||||| |  | ||||||||||||||||| |||| |||||| |||||    
T  19377084 taaaattttggtttttgcgactttgtgtagcttcaacgactcaaatctatagcagaatctcaaaa 19377148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 19579040 - 19579080
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  19579040 aaaatccatcgattttgattgcgactttacgatttcttata 19579080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 19979697 - 19979737
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttata 460  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  19979697 aaaatccatggattttgattgcgattttacgatttcttata 19979737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 19979697 - 19979737
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| | ||||||||||||||| |||||||||||||||    
T  19979697 aaaatccatggattttgattgcgattttacgatttcttata 19979737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Complemental strand, 21059179 - 21059147
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  21059179 tcgattttgattgcgattttacgatttcttata 21059147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Complemental strand, 41688688 - 41688656
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  41688688 tcgattttgattgcgattttacgatttcttata 41688656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 144; Significance: 2e-75; HSPs: 3)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 8442 - 8738
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||  ||||||||  ||||||  | ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||   |    
T  8442 cattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagca 8541  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||           
T  8542 aaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataccatatatttagtattatt---tttt 8637  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||  || |  | |||||||||||||| |||||||||||||| |||||    
T  8638 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacg 8737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 8640 - 8691
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| ||||||    
T  8640 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattcta 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 8541 - 8581
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| | ||||||||||||||| |||||||||||||||    
T  8541 aaaatccattgattttgattgcgattttacgatttcttata 8581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 216 - 516
Target Start/End: Complemental strand, 31238107 - 31237808
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||| ||    
T  31238107 cattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaa 31238008  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattattannnnn 414  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||         
T  31238007 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatgtattatta-tttt 31237910  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||||||| |||||||||||| |||| |  ||||  |||||| ||| |||| ||||  | ||||||||||||||||| ||||||||||| ||||    
T  31237909 ttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgattttac 31237810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 216 - 518
Target Start/End: Complemental strand, 15588979 - 15588685
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||| ||||||||||| ||||||| | |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| |    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    ||||| || | |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||   || ||||||||||||||||||           
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatt---tatcatatatttagtattatt---tttt 15588787  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| ||||||||||||||||| || |||||||||||| || |||| |||||  | ||||||||||||||||||||| ||||||| ||| |    
T  15588786 tggtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgattttatg 15588688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 216 - 509
Target Start/End: Original strand, 1404782 - 1405073
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||   |    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||| |||| | |||||          
T  1404882 aaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacacca-tttataacatatacttaggaatattattattt 1404980  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
       | |||||||| |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  1404981 t-tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgat 1405073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 218 - 514
Target Start/End: Complemental strand, 35566082 - 35565788
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    |||||||||||||||  ||||||||   |||||| |||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||  |||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 417  Q
    |||||| |||||| |||||  |||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||| ||        |    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatata-caatttataacatatatttagtattttt----ttttg 35565888  T
Q  418 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag---taaaatccttcgattttgattgcgatattac 514  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |||| || |||   |||||||||||||||||  ||||||| ||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgattttagttgcgattttac 35565788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 216 - 385
Target Start/End: Original strand, 30432418 - 30432587
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 385  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30432518 aaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccattt 30432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 36429847 - 36430145
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||  ||||||||  || ||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||  |    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 415  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| |||||||||||||||||| ||           
T  36429947 aaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatca-tttctaacatatatttagtatt-ttttttttt 36430044  T
Q  416 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacg 515  Q
     |||||||||||| |||||||||||| |||| |   ||| || |||| |||||||| || |  | |||||| |||||||||||||||||||||| |||||    
T  36430045 aggtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgattgcgattttacg 36430144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 219 - 408
Target Start/End: Original strand, 31578007 - 31578194
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||   ||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  319 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 408  Q
    |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt 31578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 20063713 - 20064020
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| ||||||||   ||||||  | | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattatt------ 408  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||| ||||| |||| ||||||  |||||||          
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtatacca-tttatcacatgtatttatttattatttatttt 20063911  T
Q  409 -annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcg 507  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||||||    
T  20063912 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcg 20064011  T
Q  508 atattacga 516  Q
    || ||||||    
T  20064012 attttacga 20064020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 216 - 346
Target Start/End: Complemental strand, 23863451 - 23863321
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||| ||||||  || ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||  |    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  316 aaatccattgattttaattgcgattttacga 346  Q
    |||||||| ||||||  ||||||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 300 - 509
Target Start/End: Complemental strand, 1690774 - 1690567
Alignment:
Q  300 aatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattt 399  Q
    |||||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  1690774 aatcccaaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatatacca-tttataaaatatattt 1690676  T
Q  400 agtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 499  Q
    | ||||||||       ||||||||  || ||||||||||||||||| | || |||||||||| |||  ||| |||| ||  |||||| ||||||| |||    
T  1690675 aatattatta-ttttttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttt 1690577  T
Q  500 tgattgcgat 509  Q
    || |||||||    
T  1690576 tggttgcgat 1690567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 1690893 - 1690796
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    |||||||||||||||  | ||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  1690893 ccattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  217 attgttgtcaaaatcctgacttaaat--tttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||  || ||||||  | |||||| |||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  315 aaaatccattgattttaattgcgatttta 343  Q
    ||||||||| |||||| ||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| ||| ||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 519
Target Start/End: Original strand, 16766922 - 16767085
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||||||| ||||| |||| |||||| |||||||| ||||||        |||||| ||| ||||||||||||||||||| | ||||    
T  16766922 taaactgagtcatttatgactgtatacaattt-ataacaaatatttagcattatttttgttttggtaaa-tcctttgattttgattgcgattttacgatt 16767019  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||| |||||| | |||| || |||||||||||||| |||||||||||||| ||| |||||    
T  16767020 tcttatatcgattctataaaagtagttgagtaaaatccttcaattttgattgcgattttatgattt 16767085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 354 - 519
Target Start/End: Original strand, 27406927 - 27407091
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||| ||||||||| | ||||||| |||||||||| ||||||        ||| ||||||||  |||||||||||||||| ||||||    
T  27406927 taaactgagtcatttattactatatac-agtttataatatatatttagcattatttttgttttggtgaaatccatcaattttgattgcgattttatgatt 27407025  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||  ||| | || |||| || ||||||||| ||| |||||||||||||||||||||||||    
T  27407026 tcttatattgattatccaaaagtagttgagtaaaattcttggattttgattgcgatattacgattt 27407091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 350
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  219 tgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 318  Q
    |||||| ||||||| || ||||||  ||||||| | || ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||   ||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  319 tccattgattttaattgcgattttacgatttc 350  Q
    ||||| |||||| | |||||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 519
Target Start/End: Complemental strand, 13502637 - 13502502
Alignment:
Q  384 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 483  Q
    ||||||||||||||||| |||||||        |||||||||||| ||||||||||||||||| | ||||||||||||  |||||||| || | || ||     
T  13502637 tttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgac 13502538  T
Q  484 taaaatccttcgattttgattgcgatattacgattt 519  Q
    ||| ||||||| ||||||||| |||| |||||||||    
T  13502537 taatatccttcaattttgattacgattttacgattt 13502502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 516
Target Start/End: Complemental strand, 19262279 - 19262148
Alignment:
Q  384 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 483  Q
    ||||||||||||| ||||||||||||       |||||| ||| | ||||||||||||||||| |  |||||||||||| |||||||| ||||  | |||    
T  19262279 tttataacatatagttagtattattatttttt-ggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgag 19262181  T
Q  484 taaaatccttcgattttgattgcgatattacga 516  Q
    ||||||| |||||||||||||||||| ||||||    
T  19262180 taaaatctttcgattttgattgcgattttacga 19262148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 5395779 - 5395682
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||||||||||  |||| |||||  |||||| ||||||||||||||||| |||| ||| || ||||||||||||||| |||||| ||||||||    
T  5395779 ccattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 516
Target Start/End: Complemental strand, 25539138 - 25538977
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||||||||||||| || | ||||||||||||||| ||||||        ||||||||| || |||||||||||| |||| |  |||    
T  25539138 taaactgagtcatttatgactatatacaatat-ataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaatt 25539040  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    | ||||||| |||||||| |||| ||  ||||||||||||  |||||||||||||| ||||||    
T  25539039 ttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacga 25538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 34841583 - 34841648
Alignment:
Q  244 ttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  34841583 ttaaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 16766987 - 16767046
Alignment:
Q  486 aaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttatatcgattctataaaagtagtt 16767046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 19245152 - 19245232
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatag 296  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| |||||||  ||| ||| | ||| ||||||||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 31023258 - 31023318
Alignment:
Q  252 taggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  31023258 taggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 15266081 - 15266187
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||| ||| ||||||  ||||||| |||||||||  ||||| |||| |||||| || ||||||||||  || ||| ||||||||| ||    
T  15266081 cattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaataggaa 15266180  T
Q  316 aaatcca 322  Q
    |||||||    
T  15266181 aaatcca 15266187  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 509
Target Start/End: Original strand, 30433013 - 30433105
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    ||||||||||||  |||||||||||||||| |  ||||| |||||| |||||| | ||||  | |||||||||| ||||||||||||||||||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgat 30433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 13502603 - 13502541
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||  |||||| |||| |||||    
T  13502603 gtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagtt 13502541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 35565887 - 35565825
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagtt 35565825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 457 - 516
Target Start/End: Original strand, 974576 - 974635
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  974576 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 519
Target Start/End: Original strand, 19245827 - 19245889
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||| |||||||| |||| ||  |||||||||||| ||||||||||||||| |||||||||    
T  19245827 tatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgattt 19245889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 19262246 - 19262188
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  19262246 gtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 19262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 30433014 - 30433072
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| || |||||||||||||| |||| ||||| |||||| |||||||||||||    
T  30433014 gtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagt 30433072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 27523980 - 27523928
Alignment:
Q  464 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  27523980 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 27523928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 31238008 - 31237968
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  31238008 aaaatccatcgattttgattgcgattttacgatttcttata 31237968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 16766987 - 16767026
Alignment:
Q  316 aaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttata 16767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 25539075 - 25539013
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||  |||||||||||||| || |||| |||| ||||||| |||||| ||||||||||    
T  25539075 gtaaaatctatcgattttgattgcaattttacaattttttatatcgattctacaaaagtagtt 25539013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 27406782 - 27406851
Alignment:
Q  222 tgtcaaaatcctgacttaaattttaaaattt--aggattttgcgactttcttcaccttcaacgactcaaa 289  Q
    ||||||||||| || ||||||| |||||| |  |||||||||||| ||| || |||||||||||||||||    
T  27406782 tgtcaaaatcccgaattaaattctaaaatctctaggattttgcgattttttttaccttcaacgactcaaa 27406851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 526
Target Start/End: Original strand, 1404881 - 1404922
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttatat 526  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||    
T  1404881 aaaatccatcgattttgattgtgattttacgatttcttatat 1404922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 8428140 - 8428237
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    |||||||||||||||| | || || ||| ||||||||||  ||||||||| |||  | ||||| || ||||||||| ||||| ||||||  |||||||    
T  8428140 ccattgttgtcaaaattcagaattcaatcttaaaatttaaaattttgcgattttacttacctttaatgactcaaattcataggagaatcttaaaatag 8428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 15516687 - 15516610
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccata 295  Q
    ||||||| ||||||   |||||||| |||| ||| || ||||||||||||| |||||||||||| | |||||| ||||    
T  15516687 ttgttgttaaaatcgcaacttaaatcttaatattcagcattttgcgactttattcaccttcaacaattcaaattcata 15516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 1690648 - 1690596
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||||||||||| |||||| |||||||||| |||  | ||||||||||    
T  1690648 tcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagtt 1690596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 7302027 - 7302079
Alignment:
Q  464 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||||  | |||||||||||||||||||||||||| || ||||||    
T  7302027 attctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacga 7302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 509
Target Start/End: Original strand, 8428440 - 8428512
Alignment:
Q  437 attgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||| | ||||| | ||||  |||||||| || | || ||| |||||||||||||||||||||||||    
T  8428440 attgcgattttacgatttttgatattgattctacaaaaatagttgagcaaaatccttcgattttgattgcgat 8428512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 527
Target Start/End: Complemental strand, 15588784 - 15588740
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatc 527  Q
    ||||||||| ||||||||||||||||| |||  ||||||||||||    
T  15588784 gtaaaatccatcgattttgattgcgattttataatttcttatatc 15588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 312
Target Start/End: Original strand, 17995054 - 17995150
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||| ||||| | ||||||||   ||||||  || ||||||||| ||| |||||| |||||||||||||| | ||| | ||| |||||||||    
T  17995054 cattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaatag 17995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 20034106 - 20034054
Alignment:
Q  464 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||||  | |||||||||||||| |||||||||||||| ||||||    
T  20034106 attctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacga 20034054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 30432517 - 30432557
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  30432517 aaaatccatcgattttgattgcaattttacgatttcttata 30432557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 36429946 - 36429986
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| |||||||||||||||||  ||||||||||||||    
T  36429946 aaaatccatcgattttgattgcgattgtacgatttcttata 36429986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 7e-75; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 216 - 516
Target Start/End: Original strand, 28745769 - 28746073
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  316 aaatccattgattttaattgcgattttacgatttc------ttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 409  Q
    |||| ||| |||||| |||||||||||||||||||      |||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||| |     
T  28745869 aaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatacta-tttataacatatatttactattaat- 28745966  T
Q  410 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
           |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| |||||||||||||||||||    
T  28745967 ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgat 28746066  T
Q  510 attacga 516  Q
     ||||||    
T  28746067 tttacga 28746073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 215 - 383
Target Start/End: Original strand, 29067282 - 29067450
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29067282 ccattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagac 29067381  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccat 383  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067382 aaaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 220 - 499
Target Start/End: Original strand, 39427905 - 39428183
Alignment:
Q  220 gttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaat 319  Q
    ||||||||||||| || ||||||||||||||   ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  320 ccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggt 419  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||| |        |||    
T  39428005 ccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacta-cttataacatatatttagtattaattttttttgggt 39428103  T
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 499  Q
    ||||||||| ||||||||||||||||| |  ||||| |||||| |||| ||| || |  | |||||||||||||||||||    
T  39428104 aaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgattt 39428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 215 - 518
Target Start/End: Complemental strand, 8156262 - 8155959
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa-taga 313  Q
    ||||||||||||||||||  ||||||||| ||||||| || ||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||| ||||    
T  8156262 ccattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattaga 8156163  T
Q  314 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-nnn 412  Q
     ||||||||| |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||        
T  8156162 caaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatatacca-tttataacatatatttagtattattattat 8156064  T
Q  413 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatatt 512  Q
        |||||||||||  ||| ||||||||||||| |   |||||||||||||| ||||| |||| || ||||||||||||||||| ||  ||||||| ||    
T  8156063 ttttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgatcttagttgcgatttt 8155965  T
Q  513 acgatt 518  Q
    | ||||    
T  8155964 atgatt 8155959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 216 - 514
Target Start/End: Complemental strand, 24620333 - 24620031
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgac---tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 312  Q
    ||||||||||||||| | |||||||||  ||||||||| |||||||||||   ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  313 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta--n 410  Q
      ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||| |||       
T  24620233 gcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatatacca-tttataaaatatatttagtatttttattt 24620135  T
Q  411 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgata 510  Q
          |||||||||||   |||||||||||||||| |  ||||  |||||| |||||||| ||||  | |||||||||||||||||||||||||||||     
T  24620134 ttttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcgatt 24620035  T
Q  511 ttac 514  Q
    ||||    
T  24620034 ttac 24620031  T

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Target: chr3; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 222 - 518
Target Start/End: Original strand, 17064326 - 17064606
Alignment:
Q  222 tgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 321  Q
    ||||||||||| ||||||||| |||||||| |||||||||||| | | ||||||||||||||||| ||| ||||||||||| | |||||||| ||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  322 attgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaa 421  Q
    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||               |||||||||||||| ||        |||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactat---------------atatatttagtatt-ttttttttttggtaa 17064509  T
Q  422 aatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||| |||||||||||| |||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||    
T  17064510 aatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgatt 17064606  T

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Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 217 - 514
Target Start/End: Original strand, 22137278 - 22137572
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||| | |||||||||||||||||  ||||||| | ||| || |||||||||||||||| |||| ||||||||||||||| ||||||||||||   ||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| | |||||||| |||||||||||||||||           
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttatttactaagtcatttatgactatatacta-tttataac-tatatttagtattattaatttttt 22137474  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
     |||||||||||  |||||||||  | ||| | ||||||||||||| |||||||| |||| || ||||||||| ||| ||||||| ||| ||| ||||    
T  22137475 tgtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttggttgtgattttac 22137572  T

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Target: chr3; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 290 - 514
Target Start/End: Original strand, 42696920 - 42697143
Alignment:
Q  290 tccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttata 389  Q
    |||||||||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttata 42697018  T
Q  390 acatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaat 489  Q
    |||||||||| ||||| ||        |||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||| || || ||||||    
T  42697019 acatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaat 42697118  T
Q  490 ccttcgattttgattgcgatattac 514  Q
    ||||| |||||  ||||||| ||||    
T  42697119 ccttcaattttagttgcgattttac 42697143  T

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Target: chr3; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 217 - 516
Target Start/End: Original strand, 20756039 - 20756319
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||  ||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  317 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 416  Q
    |||| || |||||| ||||| ||||||||||||||||||||||||||||                  |||||||||||||||||||||||||            
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagtca------------------tttataacatatatttagtattatt-tcttttg 20756219  T
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| || |  | |||||||||| ||| |||||||||||||| ||||||    
T  20756220 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatctttcaattttgattgcgattttacga 20756319  T

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Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 366
Target Start/End: Complemental strand, 3449419 - 3449272
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 317  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||||||||||| |||||||||| || ||||| |||||||||||| |||||||  |||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  318 atccattgattttaattgcgattttacgatttcttataaactaagtcat 366  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagtcat 3449272  T

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Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 217 - 343
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 316  Q
    |||||| ||||||||||||||||||| |||||||   | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  317 aatccattgattttaattgcgatttta 343  Q
    ||| ||| |||||| ||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

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Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 409
Target Start/End: Original strand, 21963438 - 21963620
Alignment:
Q  226 aaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 325  Q
    ||||||| |||||||||  ||||||| | |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  326 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 409  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21963538 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21963620  T

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Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 409
Target Start/End: Original strand, 21985874 - 21986056
Alignment:
Q  226 aaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 325  Q
    ||||||| |||||||||  ||||||| | |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  326 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 409  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21985974 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21986056  T

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Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 255 - 404
Target Start/End: Complemental strand, 22494872 - 22494731
Alignment:
Q  255 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttat 354  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| | ||||| ||| |||||| ||||||||||||||       ||    
T  22494872 gattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgattgcgattttacg-------at 22494780  T
Q  355 aaactaagtcatctatgactatataccattttataacatatatttagtat 404  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  22494779 aaactaagtcagttatgactatatacca-tttataacatatatttagtat 22494731  T

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Target: chr3; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  316 aaatcc 321  Q
    ||||||    
T  27676455 aaatcc 27676460  T

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Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 15515296 - 15515195
Alignment:
Q  306 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 405  Q
    ||||||| |||||| | | |||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 15515198  T
Q  406 att 408  Q
    |||    
T  15515197 att 15515195  T

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Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 24649818 - 24649724
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    |||||||||||||||| |||||||||  |||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaata 24649724  T

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Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 519
Target Start/End: Original strand, 27676634 - 27676736
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| || |||||||||| |||||||||||||||||| ||| ||    
T  27676634 ggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaaga 27676733  T
Q  517 ttt 519  Q
    |||    
T  27676734 ttt 27676736  T

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Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 374 - 518
Target Start/End: Complemental strand, 25870294 - 25870152
Alignment:
Q  374 tatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacaga 473  Q
    |||||||||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  |||||||||||| |||||||| |    
T  25870294 tatataccattt-ataacatatatttagtattatt-gttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 25870197  T
Q  474 agtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
      | || ||||||||||||| ||||||| ||||||| ||||||||    
T  25870196 cttagttgagtaaaatcctttgattttggttgcgattttacgatt 25870152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 519
Target Start/End: Complemental strand, 6136500 - 6136398
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||||| |||||| | |||| || |||||||||| || ||||||||||||||| ||||||    
T  6136500 ggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgattgcgattttacga 6136401  T
Q  517 ttt 519  Q
    |||    
T  6136400 ttt 6136398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 215 - 366
Target Start/End: Complemental strand, 22356184 - 22356032
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||||||| ||||||| | |||||||||  ||||||| ||||||||  || ||| || || ||||||| | |  ||| ||||||||||||| ||||||      
T  22356184 ccattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataag 22356085  T
Q  314 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 366  Q
     |||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  22356084 caaaatccatgaattttgattgcgattttacgatttcttataaactaagtcat 22356032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 417 - 516
Target Start/End: Original strand, 13286142 - 13286241
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| |||||| |||| ||||| | ||||||||||||| |||||||| |||| || |||||||||| || ||||||||||||||| ||||||    
T  13286142 ggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgattgcgattttacga 13286241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 25870506 - 25870350
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacga----ctcaaatccatagtagaatcccaaaata 311  Q
    ||||||||||||||||  |||||||||  ||||||  | ||||||| ||||||||||| |||||||||    ||||||| | |||||||| | |||||||    
T  25870506 cattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaata 25870407  T
Q  312 gaaaaaatccat-----tgattttaattgcgattttacgatttcttataaactaagt 363  Q
    |  |||||||||     ||||||| |||||||||||||||||||||||||| |||||    
T  25870406 ggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaattaagt 25870350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 15806635 - 15806543
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    ||||||||||||||||| |||||||||  || |||  || ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 17796376 - 17796473
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    ||||||||||||||| | |||||||||  |||||| ||||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 17796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 19104816 - 19104913
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    ||||||||||||||| | |||||||||  |||||| ||||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 19104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 28135960 - 28136061
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||  ||||||||||||| | |||| |  |||||||||||||||| |||| |||| || ||||||||||||||||||||||| ||||| ||||||    
T  28135960 ggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgatagcgattttacga 28136059  T
Q  517 tt 518  Q
    ||    
T  28136060 tt 28136061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 6136499 - 6136437
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  6136499 gtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagtt 6136437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 3449241 - 3449140
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||  |||||||||||||||| |   ||||||||||| |||||||| |||| || || ||||||| |||||||||| ||||||| ||||||    
T  3449241 ggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttggttgcgattttacga 3449142  T
Q  517 tt 518  Q
    ||    
T  3449141 tt 3449140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 17796267 - 17796364
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||| |||||||||| |  ||||||||  |||||| |||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796267 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 17796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 17796485 - 17796582
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||||||||||||||   || ||||||  |||||| ||||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796485 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 17796582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 19104707 - 19104804
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||| |||||||||| |  ||||||||  |||||| |||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104707 cattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 19104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 19104925 - 19105022
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||||||||||||||   || ||||||  |||||| ||||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104925 cattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 19105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 25614110 - 25614037
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccat 294  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||  |||| ||| |||| ||||||||||    
T  25614110 ttgtaaaaatcctgacttaaattttaaaatctatgattttgcgactttgctcactttcgacgattcaaatccat 25614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 13005927 - 13006019
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    |||||||||||||||  ||||||||||| |||||| |  ||||||||||||| |||||||| |||   |||||||||||| | ||||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctttaacatttcaaatccatagcaaaatcccaaaa 13006019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 519
Target Start/End: Complemental strand, 10872646 - 10872544
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||  ||||| |||  ||||| | ||||||||||||| ||||| || |||| ||  ||||||||||||| |||||||||||||| ||| ||    
T  10872646 ggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgattgcgattttatga 10872547  T
Q  517 ttt 519  Q
    |||    
T  10872546 ttt 10872544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 13286143 - 13286205
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||| |||||| ||||||||||    
T  13286143 gtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagtt 13286205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  218 ttgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatag 296  Q
    ||||||||||||| | || ||||||  ||||||| |||||||||||||||| ||||| ||||  |||||||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 42697047 - 42697109
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||  ||| ||||||||||||| |||||| ||||||||||    
T  42697047 gtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagtt 42697109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 10873039 - 10872971
Alignment:
Q  253 aggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 321  Q
    ||||||||| ||  || ||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  10873039 aggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 22971050 - 22971106
Alignment:
Q  460 atcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  22971050 atcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 22971106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 457 - 516
Target Start/End: Complemental strand, 8592290 - 8592231
Alignment:
Q  457 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||| |||||||| ||||  | ||||||||||||||||||||||||||||| ||||||    
T  8592290 tatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacga 8592231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 25870252 - 25870201
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  25870252 gtaaaatccatcgattttgattgcgattttacaatttcttatatcgattcta 25870201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 3449240 - 3449178
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || |||||||||||||| ||||  ||||||||||| |||||| ||||||||||    
T  3449240 gtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagtt 3449178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 17064506 - 17064568
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| |||||||||||||| || |||| |||||||||||  |||||| ||||||||||    
T  17064506 gtaaaatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagtt 17064568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 27676635 - 27676697
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| | ||||||||||| ||| ||||||||||||||||| ||| || ||||||||||    
T  27676635 gtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagtt 27676697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Original strand, 28745975 - 28746033
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  28745975 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 28746033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 499
Target Start/End: Original strand, 29067475 - 29067557
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 499  Q
    |||||||||||| ||||||||||||||||| |  | |||  |||||||||||||| || |  | |||||||||||||||||||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgattt 29067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 8156161 - 8156121
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttata 8156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 539
Target Start/End: Original strand, 20756221 - 20756277
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaa 539  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||    
T  20756221 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaa 20756277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 516
Target Start/End: Original strand, 3041485 - 3041520
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3041485 gagtaaaatccttcgattttgattgcgattttacga 3041520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 516
Target Start/End: Original strand, 18014253 - 18014288
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacga 516  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18014253 gagtaaaatccttcgattttgattgcgattttacga 18014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 542
Target Start/End: Original strand, 21963630 - 21963689
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagta 542  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| ||||||||||||||    
T  21963630 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagta 21963689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 542
Target Start/End: Original strand, 21986066 - 21986125
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagta 542  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| ||||||||||||||    
T  21986066 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagta 21986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 27497740 - 27497653
Alignment:
Q  226 aaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 313  Q
    |||||||||||| |||||| |||| ||||||||||| |||||| || ||||| ||| | | |||||||||| | |||| |||| ||||    
T  27497740 aaaatcctgactcaaatttcaaaacttaggattttgtgactttatttacctttaacaatttaaatccataggaaaatctcaaagtaga 27497653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 545
Target Start/End: Original strand, 22137476 - 22137538
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| || |||||||||  | | ||||||||||||||||| |||||| ||||||||||    
T  22137476 gtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagtt 22137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 519
Target Start/End: Original strand, 27090704 - 27090742
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  27090704 gagtaaaatccttcgatttttattgcgatcttacgattt 27090742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 39428102 - 39428151
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattc 532  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| ||||    
T  39428102 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattc 39428151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 509
Target Start/End: Complemental strand, 8560324 - 8560296
Alignment:
Q  481 gagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||||||||||||||||||||||    
T  8560324 gagtaaaatccttcgattttgattgcgat 8560296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 28745876 - 28745908
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  28745876 tcgattttgattgcgattttacgatttcttata 28745908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 525
Target Start/End: Original strand, 29067382 - 29067422
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttata 525  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  29067382 aaaatccatcgattttgattgtgattttacgatttcttata 29067422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 539
Target Start/End: Original strand, 29067476 - 29067532
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaa 539  Q
    ||||||||| ||||||||||||||||| |||| | |||  |||||||||||| ||||    
T  29067476 gtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaa 29067532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 39428008 - 39428040
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  39428008 tcgattttgattgcgattttacgatttcttata 39428040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 41671426 - 41671474
Alignment:
Q  466 tctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
    |||||| |||| || ||||||||||||||||||||| ||||||| ||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 41671474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  221 ttgtcaaaatcctgacttaaattttaaaatttaggattttgcgac 265  Q
    |||||||||||| |||||||||  ||||||| |||||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 525
Target Start/End: Original strand, 42696953 - 42696985
Alignment:
Q  493 tcgattttgattgcgatattacgatttcttata 525  Q
    ||||||||||||||||| |||||||||||||||    
T  42696953 tcgattttgattgcgattttacgatttcttata 42696985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 123; Significance: 6e-63; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 215 - 514
Target Start/End: Complemental strand, 7586 - 7289
Alignment:
Q  215 ccattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 314  Q
    |||||||||| | ||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||   |||||||||||||||||| |||||||      
T  7586 ccattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggc 7487  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 414  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||  ||| ||||||||||||||||||||          
T  7486 aaaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatatacca-attagaacatatatttagtattatt-gtttt 7389  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||| ||| ||||||||||||||||  |  ||||| |||||| |||| ||| ||||  | |||||||||||||||||||||||| |||| ||||    
T  7388 ttggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgattacgattttac 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 105; Significance: 3e-52; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 216 - 519
Target Start/End: Complemental strand, 93834 - 93534
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||||| |||||||||  ||||||  || ||||||  | |||||||||| ||||| |||||||||||||| ||||| | |||||||       
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  316 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgact-atataccattttataacatatatttagtattattannnnn 414  Q
    |||||||| |||||| ||||||||||||||||||||| |||| |||||| | ||||||| |||||| | || ||||||||||||||||| ||||          
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacga-ttcataacatatatttagtaatatt-tgttt 93639  T
Q  415 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattac 514  Q
      |||||||||||| ||||||||||||||||| | ||||| ||||||| |||||||| |||| || || ||||||||||||||||||||| |||| ||||    
T  93638 ttggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgattacgattttac 93539  T
Q  515 gattt 519  Q
     ||||    
T  93538 aattt 93534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 93635 - 93573
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||    
T  93635 gtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagtt 93573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 522
Target Start/End: Complemental strand, 93736 - 93700
Alignment:
Q  486 aaatccttcgattttgattgcgatattacgatttctt 522  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  93736 aaatccatcgattttgattgcgattttacgatttctt 93700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 354 - 519
Target Start/End: Complemental strand, 8952 - 8788
Alignment:
Q  354 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 453  Q
    |||||| |||||| ||||||||||||| | || ||||||||||||||| |||||         |||||||||||| ||||||||||||||||| |  | |    
T  8952 taaactgagtcatttatgactatatacaactt-ataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagt 8854  T
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||| |||||||| |||| || |||||||||||||||||||||||| |||| ||| |||||    
T  8853 tcttatatctattctacaaaagtagttgagtaaaatccttcgattttgattacgattttatgattt 8788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 9150 - 9070
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatag 296  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| || ||| |||||||||||||||||||||||||||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatag 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 8889 - 8827
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    ||||||||| ||||||||||||||||| |||| | |||||||||| |||||| ||||||||||    
T  8889 gtaaaatccatcgattttgattgcgattttacaagttcttatatctattctacaaaagtagtt 8827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 216 - 355
Target Start/End: Complemental strand, 231 - 91
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata-gaa 314  Q
    ||||||||  || |||| |||||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| |      
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  315 aaaatccattgattttaattgcgattttacgatttcttata 355  Q
    ||||||||| |||||| |||| |||||||| ||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttata 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 131 - 34
Alignment:
Q  420 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    ||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || ||||||||||||||||||||| || |||| ||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttggtttcgattttacgatt 34  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 534
Target Start/End: Complemental strand, 131 - 82
Alignment:
Q  485 aaaatccttcgattttgattgcgatattacgatttcttatatcaattcta 534  Q
    ||||||| ||||||||||||| ||| |||| |||||||||||| ||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattcta 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 315  Q
    ||||||||||||||| | |||||||||||||||||| || ||||||| | ||| |||||||||||| |||||||||||||| ||||||  |||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  316 aaatcc 321  Q
    ||||||    
T  37196 aaatcc 37191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 56356 - 56264
Alignment:
Q  417 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgat 509  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||    
T  56356 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgat 56264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 58790 - 58746
Alignment:
Q  338 attttacgatttcttataaactaagtcatctatgactatatacca 382  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatatacca 58746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 56355 - 56297
Alignment:
Q  483 gtaaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagt 541  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||| ||||||    
T  56355 gtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 56297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 309
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  216 cattgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 309  Q
    ||||||||| ||||| | |||||||||  |||||| ||| ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 519
Target Start/End: Complemental strand, 61243 - 61143
Alignment:
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgatt 518  Q
    |||| ||||| ||||||| || |||||| | |||||| |||||| |||||||| |||| ||  |||||||| ||||||||||||||| ||| ||||||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgattgtgattttacgatt 61144  T
Q  519 t 519  Q
    |    
T  61143 t 61143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 48591 - 48505
Alignment:
Q  419 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattg 505  Q
    |||| ||||| ||||||||| ||||||| | || ||||| |||| |||||||| |||| ||  ||||||||||||||||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgattg 48505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 61472 - 61418
Alignment:
Q  257 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 311  Q
    |||||||||||| ||| |||||||||  |||||||||||  ||||||||||||||    
T  61472 ttttgcgactttattcgccttcaacggttcaaatccatatgagaatcccaaaata 61418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Complemental strand, 48591 - 48530
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacgatttcttatatcaattctataaaagtagtt 545  Q
    |||| ||| ||||||||||| ||||| |||||| ||||| |||| |||||| ||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagtt 48530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 434 - 519
Target Start/End: Original strand, 885 - 970
Alignment:
Q  434 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| |||||||||||||||| || |||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattt 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 302  Q
    |||||||||||||||  |||||||||| ||||||| |  ||||||  ||||| |||||||| |||||||||||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1892 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 886 - 951
Alignment:
Q  255 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 320  Q
    ||||||||||||||  | | ||||||| ||||||||| |||| ||||||||||||||| |||||||    
T  886 gattttgcgactttacttatcttcaacaactcaaatcgatagcagaatcccaaaataggaaaaatc 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 2388 - 2465
Alignment:
Q  217 attgttgtcaaaatcctgacttaaattttaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccat 294  Q
    |||||||||| ||||  ||||||| ||  |||||||||||| |||||||||| || | |||||| |||||||||||||    
T  2388 attgttgtcagaatcacgacttaagttccaaaatttaggatcttgcgactttatttagcttcaatgactcaaatccat 2465  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 145823 - 145888
Alignment:
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||| |||||||| ||||    |||||||||||||||||||||||||| || |||||||||    
T  145823 tcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgctattttacgattt 145888  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 33173 - 33238
Alignment:
Q  454 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacgattt 519  Q
    ||||||||| |||||||| ||||    ||||||||| ||||||||||||||||||| |||| ||||    
T  33173 tcttatatcgattctacaaaagtaagtgagtaaaattcttcgattttgattgcgattttacaattt 33238  T

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Target: scaffold0079 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 14790 - 14758
Alignment:
Q  484 taaaatccttcgattttgattgcgatattacga 516  Q
    |||||||||||||||||||||||||| ||||||    
T  14790 taaaatccttcgattttgattgcgattttacga 14758  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 132999 - 132947
Alignment:
Q  464 attctacagaagtggtcgagtaaaatccttcgattttgattgcgatattacga 516  Q
    |||||||| ||||  | ||| ||||||||||||||||||||||||| ||||||    
T  132999 attctacaaaagtccttgaggaaaatccttcgattttgattgcgattttacga 132947  T

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