View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21621_high_10 (Length: 252)
Name: NF21621_high_10
Description: NF21621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21621_high_10 |
 | |
|
| [»] scaffold0251 (1 HSPs) |
| | |
|
| [»] scaffold0110 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 13085139 - 13085299
Alignment:
| Q |
17 |
aagagttcgcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13085139 |
aagagttcgcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccaccaaaattgagagaaa |
13085238 |
T |
|
| Q |
117 |
atctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13085239 |
atctcgaataattttattgaataaaaaagtgtctcttaggctgcataatgttctgtttaaa |
13085299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 13086206 - 13086417
Alignment:
| Q |
41 |
aaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataa |
140 |
Q |
| |
|
||||||||| ||| |||||| |||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||||||||| | |
|
|
| T |
13086206 |
aaagataaattgataggttgtaagcgacaaacctatcaaaataagagttttcagaatccattagaattgagagaaaatctcgaataattttattgaatta |
13086305 |
T |
|
| Q |
141 |
aaaagtgtctcttatgctgcataatgttctgtttaaactttacgccttatttgtttaaacttagctttttgcctccgttaacccaatcatcaacaattga |
240 |
Q |
| |
|
||||||| | |||| || |||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||| |
|
|
| T |
13086306 |
aaaagtgccccttaggccgcataatgttctgtttaaactttatgccttatttgtttaaacttagttgtttccctctgttaacccaatcatcaacaattga |
13086405 |
T |
|
| Q |
241 |
cggtagggacca |
252 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13086406 |
cggtagggacca |
13086417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22716686 - 22716574
Alignment:
| Q |
31 |
gctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataatt |
129 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||||| ||||||||| | |
|
|
| T |
22716686 |
gctaaacctaaaatataaactgacaggttgcaagcgacaaacctatcaaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaatatta |
22716587 |
T |
|
| Q |
130 |
ttattgaataaaa |
142 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
22716586 |
ttaatgaataaaa |
22716574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 22988531 - 22988643
Alignment:
| Q |
31 |
gctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataatt |
129 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| || ||||||||||||| ||||||||| | |
|
|
| T |
22988531 |
gctaaatctaaaagataaactgacaggttgcaagcgacaaacctatcgaaaaaagggtttccggaatccaccagaattgagagaaaagtctcgaatatta |
22988630 |
T |
|
| Q |
130 |
ttattgaataaaa |
142 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
22988631 |
ttaatgaataaaa |
22988643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 6659416 - 6659506
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagt |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
6659416 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaatagttttagtgaatcaaaaagt |
6659506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 9596975 - 9596854
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||||||| | |||||| || ||||||||||||| |||| | |
|
|
| T |
9596975 |
gcaagcgctaaacctaaaagataaaaagacaggttgcaaacgataaacctatc-aaataagggtttccataatccaccagaattgagagaaaagtctcaa |
9596877 |
T |
|
| Q |
124 |
ataattttattgaataaaaaagt |
146 |
Q |
| |
|
||| | ||||||||| ||||||| |
|
|
| T |
9596876 |
atattcttattgaatgaaaaagt |
9596854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 54239640 - 54239513
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
|||| |||||||||||| || ||||| |||| ||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||| | |
|
|
| T |
54239640 |
gcaaacgctaaacctaagaggtaaacagacaagttacaagggacaaacctatcaaa-taagggttttcggaatccaccaaaattgagaaaagttctcg-a |
54239543 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||||| | ||||| ||| ||||| |
|
|
| T |
54239542 |
taattttattgattgaaaaactgtatctta |
54239513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 2053083 - 2053214
Alignment:
| Q |
45 |
ataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaa |
143 |
Q |
| |
|
|||||| |||| ||||||||||||||| |||||||| ||||||||| || |||||| | ||||||| |||| ||||||||||||||||||||| || | |
|
|
| T |
2053083 |
ataaacagacaagttgcaagcgacaaatctatcaaa-taagggtttccgaaatccactagaattgaggaaaaagtctcgaataattttattgaatgaata |
2053181 |
T |
|
| Q |
144 |
agtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||| ||||||| ||||||||| ||| |||||||| |
|
|
| T |
2053182 |
agtctctcttaggctgcataa-gttatgtttaaa |
2053214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 19684789 - 19684880
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||| | |||| || | ||||||||||||| |
|
|
| T |
19684789 |
gcaagcgctaaacctaaaagataaacagacagtttgcaagcgacaaacctatc-aaacaagggtttccagaattcaatagaattgagagaaaa |
19684880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 22691325 - 22691205
Alignment:
| Q |
45 |
ataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaa |
143 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||| ||| ||||| | ||| ||||||||| |
|
|
| T |
22691325 |
ataaattgacacattgcaagcgacaaacctatcgaaataagggtttccggaatccaccagaattgagagaaaagtcttgaatattattaatgaataaaag |
22691226 |
T |
|
| Q |
144 |
agtgtctcttatgctgcataa |
164 |
Q |
| |
|
||| |||||| ||| ||||| |
|
|
| T |
22691225 |
tgtgcctcttaggctacataa |
22691205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 38223089 - 38223233
Alignment:
| Q |
31 |
gctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattt |
130 |
Q |
| |
|
||||||||||||||||||| || ||| ||||| ||||||||||||| |||||||||||| | ||||||| | |||||||| ||| |||||| | ||| |
|
|
| T |
38223089 |
gctaaacctaaaagataaatagataggctgcaaacgacaaacctatc-aaataagggtttacagaatccactagaattgaga-aaagtctcgataatttt |
38223186 |
T |
|
| Q |
131 |
tattgaat-aaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||||| ||| |||||||| |
|
|
| T |
38223187 |
tattgaatgaaaaaagtgtctcttaggttgcataa-gttatgtttaaa |
38223233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 4053145 - 4053030
Alignment:
| Q |
60 |
gcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgct |
158 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| |||||| || ||||||||||||| ||||||||| ||||||||||| ||||| |||||||| | | |
|
|
| T |
4053145 |
gcaagcgacaaacctatcaag-taaggattttcgaaatccaccataattgagagaaaagtctcgaatatttttattgaat-gaaaagagtctcttaggtt |
4053048 |
T |
|
| Q |
159 |
gcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||| ||| |||||||| |
|
|
| T |
4053047 |
gcataa-gttttgtttaaa |
4053030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 2880221 - 2880169
Alignment:
| Q |
28 |
agcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaa |
81 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| |||||||| |||||| |
|
|
| T |
2880221 |
agcgctaaacctaaaagataaacaaacaagttgcaagc-acaaacctgtcaaaa |
2880169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 18180738 - 18180890
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| || |||||||||||||||||||| |
|
|
| T |
18180738 |
gcaagcgctaaacctaaaggataaactgacatgttgcaagcgacaaacctatcaaaataagggtttccagaatccaccagaattgagagaaaatctcgaa |
18180837 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||||||||| |||||||| |||||| ||| |||||||||||||||||| |
|
|
| T |
18180838 |
taattttattgaatcaaaaagtgcctcttaggctacataatgttctgtttaaa |
18180890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 22921936 - 22922046
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaa--agtgtctctt |
153 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
22921936 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaggtgtgtctctt |
22922035 |
T |
|
| Q |
154 |
atgctgcataa |
164 |
Q |
| |
|
| ||||||||| |
|
|
| T |
22922036 |
aggctgcataa |
22922046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 22926734 - 22926842
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgtctcttat |
155 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||||||||| ||| |||||||||| |
|
|
| T |
22926734 |
ggttgcaagcgacaaacctatcaaaataagggtttctggaatccaccagaattgagagaaaatctcgaatatttttattgaattaaattgtgtctcttag |
22926833 |
T |
|
| Q |
156 |
gctgcataa |
164 |
Q |
| |
|
||||||||| |
|
|
| T |
22926834 |
gctgcataa |
22926842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 42891750 - 42891842
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
42891750 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcaaataattttattgaatcaaaaagtgt |
42891842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 22512132 - 22512220
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaa |
144 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22512132 |
ggttgcaagtgacaaacctatcaaaataagggtttccgaaatccaccagaattgagagaaaatctcgaataattttattgaataaaaaa |
22512220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 22520885 - 22520968
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaata |
139 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22520885 |
ggttgcaagtgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaata |
22520968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 6845339 - 6845241
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaa-ttgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| | ||| ||||| ||||||||||||||| |
|
|
| T |
6845339 |
ggttgcaagcgacaaacctatcaaaataagggttt-cggaatccaccaaaaattgagagaaaatctcgaatattattaatgaatcaaaaagtgtctctta |
6845241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 42890392 - 42890309
Alignment:
| Q |
59 |
tgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
42890392 |
tgcaagcgacaaacctatcaaaataagggtttccggaatccacca------agagaaaatctcgaataattttattgaatcaaaaagtgt |
42890309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 23573586 - 23573477
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||| ||||||||| | ||| ||||||||| ||| |||||| |
|
|
| T |
23573586 |
ggttgcaagcgacaaacctatcaaaataagggtttccgaaatccacctaaattgagagaaaagtctcgaatattattaatgaataaaagtgtgcctctta |
23573487 |
T |
|
| Q |
155 |
tgctgcataa |
164 |
Q |
| |
|
||| ||||| |
|
|
| T |
23573486 |
ggctacataa |
23573477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 4360860 - 4360982
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa--tctcg |
122 |
Q |
| |
|
||||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||| |||| ||||| |
|
|
| T |
4360860 |
gcaagcgttaaacttaaaagataaatacacaggttgcaagcgacaaacctat-taaataaaggtttctagaatccatcgaaattgagaaaaaaagtctcg |
4360958 |
T |
|
| Q |
123 |
aataattttattgaataaaaaagt |
146 |
Q |
| |
|
|||| ||||||||||| ||||||| |
|
|
| T |
4360959 |
aatatttttattgaatgaaaaagt |
4360982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 37189869 - 37189778
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || |||||| || ||||||||| ||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
37189869 |
ggttgcaagcgacaaacctatcaaaataaggg-ttccgaaatccaccagaaattgaga-aaaatctcgaatattattaatgaataaaaaagtgt |
37189778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 38082155 - 38082271
Alignment:
| Q |
38 |
ctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaa |
137 |
Q |
| |
|
||||||||||||| || |||||||||||||||||| |||| |||||||||||| |||||| |||| |||||||| || |||||| | |||||||||| |
|
|
| T |
38082155 |
ctaaaagataaacagagaggttgcaagcgacaaacatatc-aaataagggtttcaggaatctatcagaattgagaaaagttctcgataatttttattgaa |
38082253 |
T |
|
| Q |
138 |
t-aaaaaagtgtctctta |
154 |
Q |
| |
|
| ||||||||| |||||| |
|
|
| T |
38082254 |
tgaaaaaagtgcctctta |
38082271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 12310895 - 12310816
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaa |
105 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||| |||||||||||||| |||| ||||||||||||| |||| |||| |
|
|
| T |
12310895 |
gcaagcgctaaacctaaaagataaacagacaagttgtgagcgacaaacctat-aaaaaaagggttttcggagtccaccaaa |
12310816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 23570588 - 23570516
Alignment:
| Q |
55 |
aggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaata |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| || || ||||||||||||| ||||||||| |
|
|
| T |
23570588 |
aggttgcaagcgacaaacctatcaaaataagggtttccagaatgcaccagaattgagagaaaagtctcgaata |
23570516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 26150669 - 26150572
Alignment:
| Q |
80 |
aataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||||| ||| | ||||||| || ||||||||||||| ||||||||| ||||||||||| |||||||| |||||| ||||||||| ||| |||||||| |
|
|
| T |
26150669 |
aataaggatttccagaatccaccagaattgagagaaaagtctcgaatatttttattgaatgaaaaagtgcctcttaagctgcataa-gttttgtttaaa |
26150572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 9295366 - 9295242
Alignment:
| Q |
26 |
caagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaat |
125 |
Q |
| |
|
||||||||||| |||| |||||||| |||| ||||||||||||||| || || ||||| | |||| |||||||| || |||||||| || ||||| || |
|
|
| T |
9295366 |
caagcgctaaatctaagagataaacagacaagttgcaagcgacaaatctgtc-aaatatgagtttctggaatccaccagaattgagaaaagttctcg-at |
9295269 |
T |
|
| Q |
126 |
aattttattgaataaaaaagtgtctct |
152 |
Q |
| |
|
||||||||||||| |||| ||||||| |
|
|
| T |
9295268 |
aattttattgaatgtaaaactgtctct |
9295242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 2262778 - 2262692
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgaga |
112 |
Q |
| |
|
||||||| |||| |||||||||||| ||| |||||||||||||||| | | ||||||||||||||||||||| | |||||||||| |
|
|
| T |
2262778 |
gcaagcgtaaaacttaaaagataaacaaacaagttgcaagcgacaaacttgt-aaaataagggttttcggaatctactaaaattgaga |
2262692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 15081599 - 15081477
Alignment:
| Q |
30 |
cgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatt |
129 |
Q |
| |
|
|||||||| ||| |||||||| ||| |||||||||||||||||| || |||||| ||||| | ||||||| | |||||||| || ||||| |||||| |
|
|
| T |
15081599 |
cgctaaacataagagataaacacacaagttgcaagcgacaaacctgtc-aaataaaggtttccagaatccacaagaattgagaaaagttctcg-ataatt |
15081502 |
T |
|
| Q |
130 |
ttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||| ||||| || |||||| |
|
|
| T |
15081501 |
ttattgaaggaaaaactgcctctta |
15081477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 22519432 - 22519466
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttt |
90 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22519432 |
ggttgcaagtgacaaacctatcaaaataagggttt |
22519466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10456252 - 10456316
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttt |
90 |
Q |
| |
|
|||||| ||||| |||||||||||| || | |||||||||||||||||| |||||| |||||||| |
|
|
| T |
10456252 |
gcaagctctaaatctaaaagataaatagataagttgcaagcgacaaacctgtcaaaa-aagggttt |
10456316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 8781544 - 8781395
Alignment:
| Q |
27 |
aagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaata |
126 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||| || ||||||||| |||||||||||| |
|
|
| T |
8781544 |
aagcgctaaacctaaaagataaacagacaggttgcaagcgacaaacctatc-aaataaggg-tttcgaaatccaccagaattgagagtaaatctcgaata |
8781447 |
T |
|
| Q |
127 |
attttattgaat-aaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||||||| ||||||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
8781446 |
attttattgaatgaaaaaagtgcctcttaggctgcataacgttctgtttaaa |
8781395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 22264468 - 22264317
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
||||||| ||||||||| ||||||| ||||||||||||| |||||||||||| || ||| ||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
22264468 |
gcaagcgttaaacctaatagataaagagacaggttgcaagagacaaacctatcgaa-taaaggtttctagaatccatcagaattgagataaaatctcgaa |
22264370 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||||||||| |||||||| |||||| ||||||||||||| || ||||| |
|
|
| T |
22264369 |
taattttattgaatcaaaaagtgcctcttaggctgcataatgttatgcttaaa |
22264317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 27956240 - 27956332
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27956240 |
ggttgcaagcgacaaacctatgaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagtgt |
27956332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 2155968 - 2155861
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatg |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| | ||||||||||||| |||||||||| | |
|
|
| T |
2155968 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcagaattgagagaaaagtcttgaatattattattgaataaaagtgtgtctcttagg |
2155869 |
T |
|
| Q |
157 |
ctgcataa |
164 |
Q |
| |
|
|||||||| |
|
|
| T |
2155868 |
ctgcataa |
2155861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 33655631 - 33655538
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
33655631 |
ggttgcaaacgacaaacctatcaaaataagggtttccggaatccaccagaaattgagagaaaatctcgaataattttattgaatgaaaaagtgt |
33655538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 27952404 - 27952496
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27952404 |
ggttgcaagcgacaaacctttgaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagtgt |
27952496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 18725654 - 18725778
Alignment:
| Q |
30 |
cgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataat |
128 |
Q |
| |
|
|||||||| |||||||||||| |||||| ||||||||||||||||||| |||||| ||||| ||| |||| |||||| |||||||| | || |||||| |
|
|
| T |
18725654 |
cgctaaacttaaaagataaacagacaggctgcaagcgacaaacctatc-aaataaaggtttctggattccactaaaattaagagaaaagtttcaaataat |
18725752 |
T |
|
| Q |
129 |
tttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||| ||||||||||||||| |
|
|
| T |
18725753 |
tttattgaatgaaaaagtgtctctta |
18725778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 44675277 - 44675368
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa |
117 |
Q |
| |
|
|||| ||| |||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
44675277 |
gcaaacgccaaacataaaagataaacagacaggttgcaagcgacatacctatc-aaataagggttttcggaatccaccagaattgagagaaaa |
44675368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 2165924 - 2165817
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatg |
156 |
Q |
| |
|
|||||||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||| ||||||||| | ||| |||||||||| |||||||||| | |
|
|
| T |
2165924 |
ttgcaagcaacaaacttatcaaaataaatgttttcagaatccaccaaaattgagagaaaagtctcgaatattattaatgaataaaaatgtgtctcttagg |
2165825 |
T |
|
| Q |
157 |
ctgcataa |
164 |
Q |
| |
|
|||||||| |
|
|
| T |
2165824 |
ctgcataa |
2165817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 31634105 - 31634017
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagt |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||| | ||| ||||||||||||| |
|
|
| T |
31634105 |
ttgcaagcgacaaacctatcaaaataaggg-tttcggaatccaccagaaattgagagaaaatctcaaatattattaatgaataaaaaagt |
31634017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 31636340 - 31636250
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagt |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||| ||||| | ||| ||||||||||||| |
|
|
| T |
31636340 |
ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatcttgaatattattaatgaataaaaaagt |
31636250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 22011439 - 22011353
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaa |
141 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| ||||||||| | ||| |||||||| |
|
|
| T |
22011439 |
ggttggaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaatattattaatgaataaa |
22011353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 5841337 - 5841221
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| |||||||||||||||||| || ||| | |||||||||||||||| | |||||||| || ||||| | |
|
|
| T |
5841337 |
gcaaacgctaaacctaaaagataaacatacaagttgcaagcgacaaacctgtc-aaacaggggttttcggaatccacaagaattgagaaaagttctcg-a |
5841240 |
T |
|
| Q |
125 |
taattttattgaataaaaa |
143 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
5841239 |
taattttattgaatgaaaa |
5841221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 11190524 - 11190381
Alignment:
| Q |
32 |
ctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatttt |
131 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
11190524 |
ctaaacctaaaatataaagagacaggttgcaagcgacaaacctatcaaa-taagg-tttccggaatccaccagaattgagagaaaatctcgaataatttt |
11190427 |
T |
|
| Q |
132 |
attgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||||| ||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
11190426 |
attgaatcaaaaagtgtcttttaagctacataatgttctgtttaaa |
11190381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 26571183 - 26571044
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| || ||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
26571183 |
gcaagcgctaaacttaaaagataaatagacaggttgcaagcgacaaatctattaaa-taggggttttcggaatccgctagaattgagagaaaatctcgaa |
26571085 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctcttatgctgcataat |
165 |
Q |
| |
|
|||||||||||||| || ||||| |||||| |||||||||| |
|
|
| T |
26571084 |
taattttattgaatgaataagtggctcttaggctgcataat |
26571044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 3536037 - 3535929
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||| | ||| ||||||||| ||| |||||| |
|
|
| T |
3536037 |
ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctctta |
3535939 |
T |
|
| Q |
155 |
tgctgcataa |
164 |
Q |
| |
|
||||||||| |
|
|
| T |
3535938 |
ggctgcataa |
3535929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 3542248 - 3542140
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||| | ||| ||||||||| ||| |||||| |
|
|
| T |
3542248 |
ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctctta |
3542150 |
T |
|
| Q |
155 |
tgctgcataa |
164 |
Q |
| |
|
||||||||| |
|
|
| T |
3542149 |
ggctgcataa |
3542140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 30052205 - 30052096
Alignment:
| Q |
57 |
gttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaa-ttgagagaaaatctcgaataattttattgaataaaaaa--gtgtctctt |
153 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||| |
|
|
| T |
30052205 |
gttgcaagcgacaaacctatcaaaattagggttc-cggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgtgtctctt |
30052107 |
T |
|
| Q |
154 |
atgctgcataa |
164 |
Q |
| |
|
| ||||||||| |
|
|
| T |
30052106 |
aagctgcataa |
30052096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 30049918 - 30049827
Alignment:
| Q |
57 |
gttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaa-ttgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
30049918 |
gttgcaagcgacaaacctatcaaaattagggttc-cggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgt |
30049827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 2339107 - 2339243
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
||||||||||||||||||| ||||| |||||| ||||||| ||||| |||||||| ||||||||| || |||||| || ||||||||||||| ||||| |
|
|
| T |
2339107 |
gcaagcgctaaacctaaaa--taaacagacaggctgcaagc-acaaatctatcaaa-taagggtttccgaaatccaccagaattgagagaaaagtctcg- |
2339201 |
T |
|
| Q |
124 |
ataattttattgaataaaaaag-tgtctcttatgctgcataa |
164 |
Q |
| |
|
||||||||||||||| |||||| || |||||| ||||||||| |
|
|
| T |
2339202 |
ataattttattgaatgaaaaagatgcctcttaggctgcataa |
2339243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 29340892 - 29340980
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaa |
143 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||| ||||||||| | ||| |||||||||| |
|
|
| T |
29340892 |
ggttacaagcgacaaacctatcaaaataaaggtttccggaatccactagaattgagagaaaagtctcgaatattattaatgaataaaaa |
29340980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 13645865 - 13645955
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa |
116 |
Q |
| |
|
||||||||| | |||||||||||||| ||||| |||||||| |||||||||| |||||||||||| ||||||| | || |||||||||||| |
|
|
| T |
13645865 |
gcaagcgcttagcctaaaagataaacagacagattgcaagcaacaaacctat-taaataagggtttccggaatctaacagaattgagagaaa |
13645955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 2939768 - 2939898
Alignment:
| Q |
45 |
ataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa-atctcgaataattttattgaataaaaa |
143 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| |||||| |||||||| |||||| || |||||||||||| | | |||| |||||||||||| |||| |
|
|
| T |
2939768 |
ataaacagacatgttgcaagcgacaaacctatc-aaataa-ggttttcgaaatccaccataattgagagaaattttttgaat-attttattgaatgaaaa |
2939864 |
T |
|
| Q |
144 |
agtgt-ctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||| |||||| ||||||||| |||||| ||||| |
|
|
| T |
2939865 |
agtgtcctcttaggctgcataa-gttctgcttaaa |
2939898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 8568646 - 8568772
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaa |
124 |
Q |
| |
|
|||| ||||||||||||||||||||| |||| ||||||||| |||||||| |||||| || |||||||||||||| | |||| ||| ||| ||| | | |
|
|
| T |
8568646 |
gcaaacgctaaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaaa-aaaagttttcggaatccactagaattaaga-aaagtctag-a |
8568742 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||||||| |||| ||||||||| |
|
|
| T |
8568743 |
taattttattgaatggaaaactgtctctta |
8568772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 19474678 - 19474752
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatcca |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| | |||||||||| ||||||||||| ||||||||||||||| |||||| |
|
|
| T |
19474678 |
gcaagcgctaaagctaaaagataaacatataggttgcaagagacaaacctat-taaataagggttttcgaaatcca |
19474752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 3565768 - 3565620
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||| |||||| ||||||||| ||||||| |||| | |||||| || ||||||||||||| |||||| |
|
|
| T |
3565768 |
gcaaacgctaaacttaaaagataaca--acaggttgtaagcgataaacctatc-aaataagagtttccaaaatccaccagaattgagagaaaagtctcga |
3565672 |
T |
|
| Q |
124 |
ataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||| ||||||||||| ||||||| ||||| ||| ||||| |||||||||||| |
|
|
| T |
3565671 |
atatttttattgaat-gaaaagtgcctctttggctacataa-gttctgtttaaa |
3565620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 27142537 - 27142659
Alignment:
| Q |
30 |
cgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatt |
129 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||||||||||||||| || || ||||||| | |||||||| || |||||||| || | ||| |||||| |
|
|
| T |
27142537 |
cgctaaacctaagagataaatagacaagttgcaagcgacaaaccagtc-aattaagggtatctggaatccaccataattgagaaaagttttcg-ataatt |
27142634 |
T |
|
| Q |
130 |
ttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||| ||||| || |||||| |
|
|
| T |
27142635 |
ttattgaatgaaaaactgcctctta |
27142659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 42071378 - 42071528
Alignment:
| Q |
26 |
caagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaat |
125 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||| |||| |||| ||||||||||| |||||||||| |||||||||| |
|
|
| T |
42071378 |
caagcgctaaacctaaaagataaacagacatgttacaagtgacaaacctatcaaa-taagcgtttctggaatccatcataattgagagagaatctcgaat |
42071476 |
T |
|
| Q |
126 |
aattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||||||||||| |||| || ||||| ||||||||||||| |||||||| |
|
|
| T |
42071477 |
aattttattgaattcaaaaatgcatcttaggctgcataatgttatgtttaaa |
42071528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 50857530 - 50857640
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt--ctctt |
153 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| || ||||||||| ||||| |
|
|
| T |
50857530 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgtatcaaaaagtgtgcctctt |
50857629 |
T |
|
| Q |
154 |
atgctgcataa |
164 |
Q |
| |
|
| ||||||||| |
|
|
| T |
50857630 |
aggctgcataa |
50857640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 12486274 - 12486392
Alignment:
| Q |
17 |
aagagttcgcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa |
116 |
Q |
| |
|
||||||| |||||| ||||||||| || | |||| || | |||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12486274 |
aagagttagcaagcactaaacctacaata-aaacagatatattgcaagcaacaaacctattaaa-taagggttttcggaatccaccaaaattgagagaaa |
12486371 |
T |
|
| Q |
117 |
atctcgaataattttattgaa |
137 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
12486372 |
atctcgaataattttattgaa |
12486392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 13444076 - 13444183
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctcttatg |
156 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || |||||| || ||||||||||||| |||| |||| | ||| |||||||||| ||| |||||| | |
|
|
| T |
13444076 |
ttgcaagcgacaaacatatcaaaataagggtttccgtaatccaccagaattgagagaaaagtctctaatattattactgaataaaaatgtgcctcttagg |
13444175 |
T |
|
| Q |
157 |
ctgcataa |
164 |
Q |
| |
|
|| ||||| |
|
|
| T |
13444176 |
ctacataa |
13444183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 8931223 - 8931132
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| || ||||||||| || ||||||||||||||||||||||| | ||| || |||||||||||| |
|
|
| T |
8931223 |
ggttgcaagcgacaaacctatcaatataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatg-ataaaaaagtgt |
8931132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 12033620 - 12033736
Alignment:
| Q |
39 |
taaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaa |
137 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| |||| |||| ||||||| | ||||||| | ||||||||||||| ||||||||| ||||||| || |
|
|
| T |
12033620 |
taaaagataaacaaacaagttgcaagcgacaaacttatc-aaatgagggtttacataatccattagaattgagagaaaagtctcgaatatttttattaaa |
12033718 |
T |
|
| Q |
138 |
taaaaaag-tgtctctta |
154 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
12033719 |
taaaaaagttgtctctta |
12033736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 50005237 - 50005309
Alignment:
| Q |
81 |
ataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||| |||||||||| |
|
|
| T |
50005237 |
ataagggttttcggaatccatcaaaattgagaaaagttctcg-ataattttattgaatgaaaaggtgtctctta |
50005309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 13441685 - 13441772
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| ||| |||||||||||| ||||||||||||| |||| |||| | ||| ||||||||| |
|
|
| T |
13441685 |
ggttgcaagcgaaaaacctattaaaataaggatttccggaatccatcagaattgagagaaaagtctctaatattattaatgaataaaa |
13441772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 45085774 - 45085651
Alignment:
| Q |
31 |
gctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa--tctcgaataat |
128 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||||| | | | |||||| ||||||| |||||| || ||||||||||||| |||| ||||| |
|
|
| T |
45085774 |
gctaaacctaaaagataaacagacaagttgcaagcgacaaatat-tgacaataagagttttcgaaatccaccagaattgagagaaaagttctc-aataag |
45085677 |
T |
|
| Q |
129 |
tttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||||||| ||||| || |||||| |
|
|
| T |
45085676 |
tttattgaatgaaaaactgcctctta |
45085651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 40804700 - 40804573
Alignment:
| Q |
17 |
aagagttcgcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa |
116 |
Q |
| |
|
||||||| ||||||||||| | |||||||||| | | || |||||||||||||||||||| ||||| |||||| | |||||| || |||||||||||| |
|
|
| T |
40804700 |
aagagttagcaagcgctaa-cataaaagataagcaaaaagattgcaagcgacaaacctatc-aaatacgggtttccaaaatccaccagaattgagagaaa |
40804603 |
T |
|
| Q |
117 |
a-tctcgaataattttattgaataaaaaagt |
146 |
Q |
| |
|
| |||||||| || ||||||||| ||||||| |
|
|
| T |
40804602 |
agtctcgaat-atattattgaatgaaaaagt |
40804573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 42646702 - 42646558
Alignment:
| Q |
27 |
aagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaata |
126 |
Q |
| |
|
||||||||||| |||||||||||| | | ||||| |||||||||||||||| ||||||||| | ||||||| ||||||||| | ||| ||||| | |
|
|
| T |
42646702 |
aagcgctaaacataaaagataaac----aagctgcaaacgacaaacctatcaaa-taagggtttccagaatccaccaaaattgaaa-aaagtctcggtaa |
42646609 |
T |
|
| Q |
127 |
attttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaac |
178 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||| ||| ||||||||| |
|
|
| T |
42646608 |
tttttattgaatgaaaaaatgtctcttaaactgcataa-gttttgtttaaac |
42646558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 49044209 - 49044165
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgaca |
69 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| ||||||||||| |
|
|
| T |
49044209 |
gcaagcgctaaacctaaaagataaacagataggctgcaagcgaca |
49044165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 16261646 - 16261517
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||| ||||||| |||||||||||| ||||||| || ||| |||| ||||||| |||| ||||| | |||||||| ||||||| | |||| |||||| |
|
|
| T |
16261646 |
gcaaacgctaaatctaaaagataaataaacaggttataatcgataaacgtatcaaa-taagagtttttgaaatccatcgaaattgataaaaaagtctcga |
16261548 |
T |
|
| Q |
124 |
ataattttattgaataaaaaag-tgtctctta |
154 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| |
|
|
| T |
16261547 |
-taatattattgaataaaaaagttgtctctta |
16261517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 4303482 - 4303361
Alignment:
| Q |
27 |
aagcgctaaacctaaaagataaactgacaggttgcaagcga-caaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaat |
125 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
4303482 |
aagcgctaaacctaaaagataaagagacaggttgcaagcgaacaaacctattaaa-taagggttttcggaatccactagaattgagagaaaatctcgaat |
4303384 |
T |
|
| Q |
126 |
aattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||| ||||||||| |
|
|
| T |
4303383 |
aattttattgaatcaaaaagtgt |
4303361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 13882772 - 13882870
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
13882772 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcaaataattttattgaatcaaaaagtgtctctta |
13882870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 31577238 - 31577389
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| || |||||| || ||||||||||||| ||| || |
|
|
| T |
31577238 |
gcaagcgctaaacctaaaagataaacagataggttgcaagcgacaaacctatc-aaataagggtttccgaaatccaccagaattgagagaaaagtcttga |
31577336 |
T |
|
| Q |
124 |
ataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||| ||||||||||| ||||||| |||||| | ||||||| ||| |||||||| |
|
|
| T |
31577337 |
atatttttattgaatgaaaaagttcctcttaggttgcataa-gttttgtttaaa |
31577389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 13886276 - 13886372
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
13886276 |
ttgcaagcgacaaacctatcaaaataagggtttccagaatccaccataattgagagaaaatctcgaatgattttattgaatcaaaaagtgtctctta |
13886372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 5678275 - 5678418
Alignment:
| Q |
32 |
ctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattt |
130 |
Q |
| |
|
|||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||| | | | || || ||||||||||||| ||||||||||||| |
|
|
| T |
5678275 |
ctaaacttaaaagataaacagacaggttacaagcgacaaacctatcaaa-taagggttcacata-tacaccagaattgagagaaaagtctcgaataattt |
5678372 |
T |
|
| Q |
131 |
tattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
5678373 |
tattgaatgaaaaagtgtctcttaagctgcataa-gttctgtttaaa |
5678418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 5703327 - 5703470
Alignment:
| Q |
32 |
ctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattt |
130 |
Q |
| |
|
|||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||| | | | || || ||||||||||||| ||||||||||||| |
|
|
| T |
5703327 |
ctaaacttaaaagataaacagacaggttacaagcgacaaacctatcaaa-taagggttcacata-tacaccagaattgagagaaaagtctcgaataattt |
5703424 |
T |
|
| Q |
131 |
tattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
5703425 |
tattgaatgaaaaagtgtctcttaagctgcataa-gttctgtttaaa |
5703470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 22572444 - 22572518
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
22572444 |
gcaagcgctaaacctaaaagataaacagacaggttgcaagcgacaaatctatc-aaataagggtttccggaatcca |
22572518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 859242 - 859329
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||| |||| |||| | ||| ||||||||| |
|
|
| T |
859242 |
ggttgcaagcgacaaacctatcaaaataaaggtttccggaatccaccagaattgagagaaaagtctcaaatattattaatgaataaaa |
859329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 1217246 - 1217333
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||| |||| |||| | ||| ||||||||| |
|
|
| T |
1217246 |
ggttgcaagcgacaaacctatcaaaataaaggtttccggaatccaccagaattgagagaaaagtctcaaatattattaatgaataaaa |
1217333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 4668229 - 4668372
Alignment:
| Q |
33 |
taaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataatttt |
131 |
Q |
| |
|
|||||||||||||||||| || ||| || ||||||||||||||| |||||||||||| | |||||| | |||| |||||||| ||||||||| |||| |
|
|
| T |
4668229 |
taaacctaaaagataaacagaaaggatgtaagcgacaaacctat-taaataagggtttccataatccacctgaattaagagaaaagtctcgaatattttt |
4668327 |
T |
|
| Q |
132 |
attgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|| ||| |||||||| |||||| ||||||||| ||| |||||||| |
|
|
| T |
4668328 |
tttcaatgaaaaagtgcctcttaggctgcataa-gttatgtttaaa |
4668372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 32053074 - 32052989
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgaga |
112 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||| || ||||| |||||||| || |||||| || |||||||| |
|
|
| T |
32053074 |
gcaagcgctaaacctaaaagataaacagacaatttgcaagcgacaaatctgtcaaa--aagggtttccgaaatccaccagaattgaga |
32052989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 38875003 - 38875047
Alignment:
| Q |
208 |
tttgcctccgttaacccaatcatcaacaattgacggtagggacca |
252 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
38875003 |
tttgcttccgttaacccaatcaacaacaattgacggtagggacca |
38875047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 32936824 - 32936927
Alignment:
| Q |
33 |
taaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatttta |
132 |
Q |
| |
|
||||||||| || ||||| ||| ||||||||| ||||| | ||||| ||||||||||||||||||| || |||||||| ||| ||||| ||||||||| |
|
|
| T |
32936824 |
taaacctaagagctaaacaaacaagttgcaagcaacaaatatgtcaaa-taagggttttcggaatccaccataattgaga-aaattctcg-ataatttta |
32936920 |
T |
|
| Q |
133 |
ttgaata |
139 |
Q |
| |
|
||||||| |
|
|
| T |
32936921 |
ttgaata |
32936927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 4300511 - 4300468
Alignment:
| Q |
105 |
aattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
4300511 |
aattgagagaaaatctcaaataatttgattgaatcaaaaagtgt |
4300468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 19950036 - 19949885
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||| |||| | |
|
|
| T |
19950036 |
gcaagcgctaaacctaaaagataaacagataagttgcaagcgacaaacttatc-aaataagggtttttggaatccatcagaattgagagaaaagtctcta |
19949938 |
T |
|
| Q |
124 |
ataattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||| ||||||| ||| | |||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
19949937 |
atatttttattcaatgataaagtgactcttaggctgcataa-gttctgtttaaa |
19949885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 5128912 - 5128820
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5128912 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagtgt |
5128820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 20398455 - 20398590
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||| || |||||||| |||| |||||| |
|
|
| T |
20398455 |
gcaagcgctaaacctaaaagataatcagacaggttgcaagcgacaagtctatc-aaataagggttttcggaatccaccagaattgagaaaaaagtctcga |
20398553 |
T |
|
| Q |
124 |
ataattttattgaataaaaaagtgtctcttatgctgc |
160 |
Q |
| |
|
||| |||| || ||||||||| ||||||||| ||||| |
|
|
| T |
20398554 |
atatttttcttaaataaaaaactgtctcttaggctgc |
20398590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 40593501 - 40593605
Alignment:
| Q |
27 |
aagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaata |
126 |
Q |
| |
|
|||||||||||| |||| | |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
40593501 |
aagcgctaaaccaaaaaaa-aaacagacgggttgcaagcgacaaacctatcaaa-taagggttttcggaatccaccaaaattgagagaaaatctcgaata |
40593598 |
T |
|
| Q |
127 |
attttat |
133 |
Q |
| |
|
||||||| |
|
|
| T |
40593599 |
attttat |
40593605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 4580596 - 4580479
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||| |||||| |
|
|
| T |
4580596 |
gcaagcgctaaacctaaaagataaacacacaggttgcaagcgacaaacctatc-aaataagggttttcagaatccactagaattgagagaaaattctcga |
4580498 |
T |
|
| Q |
124 |
ataattttattgaataaaaa |
143 |
Q |
| |
|
|| |||||||||||| |||| |
|
|
| T |
4580497 |
at-attttattgaatgaaaa |
4580479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 19795244 - 19795135
Alignment:
| Q |
66 |
gacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatgctgcataat |
165 |
Q |
| |
|
||||||||||| |||||||| || || |||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
19795244 |
gacaaacctatgcaaataagg--ttacgaaatccaccaaaatttagagaaaatctggaataattttattgaataaaaaattgtctcttaggctgcataat |
19795147 |
T |
|
| Q |
166 |
gttctgtttaaa |
177 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19795146 |
gttctgtttaaa |
19795135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 41218835 - 41218686
Alignment:
| Q |
27 |
aagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaat |
125 |
Q |
| |
|
|||||||||| |||||||||||| || |||||| |||||||||||||||| |||||||| ||| ||||||||| || ||||||||||||| |||||||| |
|
|
| T |
41218835 |
aagcgctaaatctaaaagataaatagataggttgtaagcgacaaacctatc-aaataaggctttccggaatccaccagaattgagagaaaagtctcgaat |
41218737 |
T |
|
| Q |
126 |
aattttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
| | ||||||||||||| |||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
41218736 |
attattattgaataaaagtgtgtctcttaggctccataa-gttctgcttaaa |
41218686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 3063823 - 3063910
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||| | ||| ||||||||| |
|
|
| T |
3063823 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatcaaccagaattgagagaaaagtctcgaatattattaatgaataaaa |
3063910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 3068961 - 3069048
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||||||| | ||| ||||||||| |
|
|
| T |
3068961 |
ggttgcaagcgacaaacctatcaaaataagggtttccggaatccaccaaaattgagagaaaagtatcgaatattattaatgaataaaa |
3069048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 25340146 - 25340256
Alignment:
| Q |
33 |
taaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatttta |
132 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||| ||||||||||| |||||||| || | |||| ||||||| |
|
|
| T |
25340146 |
taaacctaaaagataaacagacaggttgcacgcaacaaacctatc-aaataagggtttctggaatccatcataattgagaaaagttgtcgataaatttta |
25340244 |
T |
|
| Q |
133 |
ttgaataaaaaa |
144 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25340245 |
ttgaataaaaaa |
25340256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 53013025 - 53012942
Alignment:
| Q |
60 |
gcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaa |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| ||||||||| | ||| ||||||||| |
|
|
| T |
53013025 |
gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaattgagagaaaagtctcgaatattattaatgaataaaa |
53012942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 43304046 - 43304153
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| || |||||| || ||||||||||||| ||||||||| | ||| ||||| |||||||||||||| |
|
|
| T |
43304046 |
ggttgcaagcgacaaacctattaaaataagggtttccgaaatccaccagaattgagagaaaagtctcgaatattattaatgaat--aaaagtgtctctta |
43304143 |
T |
|
| Q |
155 |
tgctgcataa |
164 |
Q |
| |
|
||| ||||| |
|
|
| T |
43304144 |
ggctacataa |
43304153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 43306758 - 43306867
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||| ||| ||||| | ||| ||||||||| ||| |||||| |
|
|
| T |
43306758 |
ggttgcaagcgacaaacctatcaaaataagggtttccgtaatccaccagaattgagagaaaagtcttgaatattattaatgaataaaagtgtgcctctta |
43306857 |
T |
|
| Q |
155 |
tgctgcataa |
164 |
Q |
| |
|
||| ||||| |
|
|
| T |
43306858 |
ggctacataa |
43306867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 25857822 - 25857685
Alignment:
| Q |
31 |
gctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaa----ataagggttttcggaatccatcaaaattgagagaaaa-tctcgaat |
125 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| ||||| |||||||| |||||||||| || |||||| || ||||||||||||| |||| ||| |
|
|
| T |
25857822 |
gctaaacctaaaagataaacagaca--ttgcaagcaacaaatctatcaaataaaataagggtttccgaaatccaccacaattgagagaaaagtctcaaat |
25857725 |
T |
|
| Q |
126 |
aattttattgaataaaaa-agtgtctcttatgctgcataa |
164 |
Q |
| |
|
| | |||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
25857724 |
attattattgaataaaaagtgtgtctcttaggctacataa |
25857685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 45168426 - 45168466
Alignment:
| Q |
104 |
aaattgagagaaaatctcgaataattttattgaataaaaaa |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45168426 |
aaattgagagaaaatctcgaataattttattgaataaaaaa |
45168466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 1151237 - 1151109
Alignment:
| Q |
25 |
gcaagcgctaaaccta--aaagataaactgacaggtt-gcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctc |
121 |
Q |
| |
|
|||||| ||||||||| |||||||||| |||| ||| |||||| ||||||||||||||| |||||||||||||||| || |||||||| ||| |||| |
|
|
| T |
1151237 |
gcaagcactaaacctataaaagataaacagacaagtttgcaagcaacaaacctatcaaaa---gggttttcggaatccaccagaattgaga-aaagtctc |
1151142 |
T |
|
| Q |
122 |
gaataattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
| | ||||||||||| ||||| ||| ||||| |
|
|
| T |
1151141 |
tataatttttattgaatgaaaaactgtttctta |
1151109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 39913350 - 39913436
Alignment:
| Q |
92 |
cggaatccatcaaaattgagagaaaa-tctcgaataattttattgaat-aaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||||||| || ||||| ||||||| ||||||||| ||||||||||| ||||| ||| |||||| ||||||||| |||||||||||| |
|
|
| T |
39913350 |
cggaatccaccagaattgggagaaaagtctcgaatatttttattgaatcaaaaatgtgcctcttaggctgcataa-gttctgtttaaa |
39913436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 1697061 - 1697205
Alignment:
| Q |
30 |
cgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcgaataat |
128 |
Q |
| |
|
|||||||| | ||||||||| ||||||||||||||||||||||||||| | || | |||| ||||||| | |||| ||||||| ||| || |||| |
|
|
| T |
1697061 |
cgctaaacatgaaagataaatagacaggttgcaagcgacaaacctatcata-tatgagtttctagaatccactagaattt-gagaaaagtcttga-taat |
1697157 |
T |
|
| Q |
129 |
tttattgaataaaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|||||||||| ||||||| ||||||| | ||||||| |||||||||||| |
|
|
| T |
1697158 |
tttattgaatgaaaaagtatctcttaagttgcataa-gttctgtttaaa |
1697205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 33620096 - 33620213
Alignment:
| Q |
59 |
tgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagag-aaaatctcgaataattttattgaataaaaaag-tgtctcttatg |
156 |
Q |
| |
|
|||||||| |||||||||||| ||||||||| | |||||| || ||||||||| ||||||||| ||| ||||||||||| |||||| ||||||||| | |
|
|
| T |
33620096 |
tgcaagcgcaaaacctatcaaa-taagggtttccagaatcctccagaattgagagaaaaatctcg-atatttttattgaattaaaaagatgtctcttagg |
33620193 |
T |
|
| Q |
157 |
ctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||| |||| ||| |||||||| |
|
|
| T |
33620194 |
ctgtataa-gttttgtttaaa |
33620213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 40778872 - 40778964
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40778872 |
ggttgcaagcgacaaacctatcaaaataagggtttctggaatccaccagaattgagagaaaatctcgaataattttattgaatcaaaaagtgt |
40778964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 19677186 - 19677337
Alignment:
| Q |
25 |
gcaagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaa-tctcga |
123 |
Q |
| |
|
||||||||||| |||||||||||||| || |||||||||||||||||||| || |||||||||||||||||||||| || ||||||||||||| |||||| |
|
|
| T |
19677186 |
gcaagcgctaagcctaaaagataaacagataggttgcaagcgacaaacctttc-aaataagggttttcggaatccaccagaattgagagaaaagtctcga |
19677284 |
T |
|
| Q |
124 |
ataattttattgaata-aaaaagtgtctcttatgctgcataatgttctgtttaaa |
177 |
Q |
| |
|
|| ||||||||||||| ||| ||| |||||| | ||||||| |||||||||||| |
|
|
| T |
19677285 |
at-attttattgaatacaaagtgtgcctcttaggatgcataa-gttctgtttaaa |
19677337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 21849051 - 21849149
Alignment:
| Q |
56 |
ggttgcaagcgacaaacctatcaaaataa------gggttttcggaatccatcaaaattgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||| ||||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21849051 |
ggttgcaagcgacaaacttatcaaaataaaaataagtgttttcggaatccactagaattgagagaaaatctcgaataattttattgaatcaaaaagtgt |
21849149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 19497363 - 19497480
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaa-ttgagagaaaatctcgaataattttattgaataaaaaagtgtctcttatg |
156 |
Q |
| |
|
||||||||||||||| | | |||||| || || || |||||||||||| |||||| |||||||| || ||| ||||||||| |||||||| |||||| | |
|
|
| T |
19497363 |
ttgcaagcgacaaacttgtgaaaataggg--ttccgaaatccatcaaaaattgagaaaaaatctctaa-aatattattgaatcaaaaagtgcctcttagg |
19497459 |
T |
|
| Q |
157 |
ctgcataatgttctgtttaaa |
177 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
19497460 |
ctgcataatgttctgtttaaa |
19497480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 7775442 - 7775324
Alignment:
| Q |
33 |
taaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatttta |
132 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| |||||||| |||||| || ||||||||||||||| | |||| ||| ||| ||| | ||||||||| |
|
|
| T |
7775442 |
taaacctaaaagataaacagacaagttgcaagctacaaacctgtcaaaa-aaaggttttcggaatccactagaattaaga-aaagtctag-ataatttta |
7775346 |
T |
|
| Q |
133 |
ttgaataaaaaagtgtctctta |
154 |
Q |
| |
|
|||||| |||| ||||||||| |
|
|
| T |
7775345 |
ttgaatggaaaaatgtctctta |
7775324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 35160790 - 35160899
Alignment:
| Q |
32 |
ctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataatttt |
131 |
Q |
| |
|
||||||||||||||||||| |||| ||||||| |||||||||| || |||||||||||| ||| |||| || |||| ||| || ||||| |||||||| |
|
|
| T |
35160790 |
ctaaacctaaaagataaacagacaagttgcaaacgacaaacctgtc-aaataagggtttcaggattccaccagaattaagaaaagttctcg-ataatttt |
35160887 |
T |
|
| Q |
132 |
attgaataaaaa |
143 |
Q |
| |
|
||||||| |||| |
|
|
| T |
35160888 |
attgaatgaaaa |
35160899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 15385013 - 15385133
Alignment:
| Q |
28 |
agcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaaatctcgaataa |
127 |
Q |
| |
|
|||| ||||| |||||||||||| |||| || |||||||||||| || | ||||||| |||| || ||||||| |||||||||| || ||||| |||| |
|
|
| T |
15385013 |
agcgttaaacttaaaagataaacagacaagtcgcaagcgacaaatctgt-taaataagagtttccgaaatccattaaaattgagaaaagttctcg-ataa |
15385110 |
T |
|
| Q |
128 |
ttttattgaataaaaaagtgtct |
150 |
Q |
| |
|
||||||||||| ||||| ||||| |
|
|
| T |
15385111 |
ttttattgaatgaaaaaatgtct |
15385133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0251 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0251
Description:
Target: scaffold0251; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 8212 - 8339
Alignment:
| Q |
26 |
caagcgctaaacctaaaagataaactgacaggttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaattgagagaaa-atctcgaa |
124 |
Q |
| |
|
||||| ||||||||| ||||||||| |||| |||||||||||||||||| || |||||||||||| ||||||||||| |||||||| ||| |||||||| |
|
|
| T |
8212 |
caagctctaaacctagaagataaacagacaagttgcaagcgacaaacctgtc-aaataagggtttctggaatccatcagaattgagaaaaagatctcgaa |
8310 |
T |
|
| Q |
125 |
taattttattgaataaaaaagtgtctctta |
154 |
Q |
| |
|
||||| ||||||| ||||||||||||||| |
|
|
| T |
8311 |
-aatttgattgaatgaaaaagtgtctctta |
8339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 45347 - 45435
Alignment:
| Q |
55 |
aggttgcaagcgacaaacctatcaaaataagggttttcggaatccatca-aaattgagagaaaatctcgaataattttattgaataaaaa |
143 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || | ||||||| || ||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
45347 |
aggttgcaagcgacaaacctatcaaaataaggg-ttccagaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaaa |
45435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 46792 - 46882
Alignment:
| Q |
58 |
ttgcaagcgacaaacctatcaaaataagggttttcggaatccatcaaaa-ttgagagaaaatctcgaataattttattgaataaaaaagtgt |
148 |
Q |
| |
|
||||||||||||||||||||||||| | |||| ||||||||| ||||| |||||||||||||||||||| | ||| ||||||||||||||| |
|
|
| T |
46792 |
ttgcaagcgacaaacctatcaaaattaaggttc-cggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgt |
46882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University