View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21621_low_11 (Length: 240)
Name: NF21621_low_11
Description: NF21621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21621_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 32203208 - 32203402
Alignment:
| Q |
28 |
aattaacctctgtgtatcaagtacctgaattcctttaatatgtgggacattacctattctgtcattgttttttcctttctgtttgtaggaaactgattta |
127 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32203208 |
aattaacctctgtgtatcaagtacctgaattcctttaatatgtgggacattacctattctgtcattgttttttcctttctgtttgtaggaaactgattta |
32203307 |
T |
|
| Q |
128 |
tcatttatgtgcttgattttaaacccacttatcagatgattgaagaatgactttaacgaaacggtatgtgctgagattgttcatatcaataaagt |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32203308 |
tcatttatgtgcttgattttaaacccacttatcagatgattgaagaatgactttaacgaaacggtatgtgctgagattgttcatatcaataaagt |
32203402 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 35566784 - 35566590
Alignment:
| Q |
28 |
aattaacctctgtgtatcaagtacctgaattcctttaatatgtgggacattacctattctgtcattgttttttcctttctgtttgtaggaaactgattta |
127 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
35566784 |
aattaacctctgtgtatcaagtacctgaattcctttaatatgtgggacattacctattctgtcattgttttttcctttctgttcgtaggaaactgattta |
35566685 |
T |
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| Q |
128 |
tcatttatgtgcttgattttaaacccacttatcagatgattgaagaatgactttaacgaaacggtatgtgctgagattgttcatatcaataaagt |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35566684 |
tcatttatgtgcttgattttaaacccacttatcagatgattgaagaatgactttaacgaaacggtatgtgctgagattgttcatatcaataaagt |
35566590 |
T |
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