View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21622_high_13 (Length: 408)

Name: NF21622_high_13
Description: NF21622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21622_high_13
NF21622_high_13
[»] chr2 (3 HSPs)
chr2 (1-397)||(21186378-21186776)
chr2 (88-144)||(14268735-14268791)
chr2 (102-144)||(37232156-37232198)
[»] chr3 (8 HSPs)
chr3 (5-261)||(8335244-8335507)
chr3 (270-391)||(8335719-8335840)
chr3 (86-144)||(47542534-47542592)
chr3 (95-144)||(18268007-18268056)
chr3 (93-142)||(21768612-21768661)
chr3 (100-144)||(47542767-47542811)
chr3 (100-144)||(47542986-47543030)
chr3 (100-144)||(47556433-47556477)
[»] chr5 (7 HSPs)
chr5 (86-145)||(15086697-15086756)
chr5 (83-146)||(15086628-15086691)
chr5 (87-143)||(9895147-9895203)
chr5 (101-151)||(10392909-10392959)
chr5 (200-251)||(15086832-15086884)
chr5 (83-139)||(16274347-16274402)
chr5 (100-144)||(28322254-28322298)
[»] chr4 (4 HSPs)
chr4 (87-137)||(843150-843200)
chr4 (103-146)||(54779167-54779210)
chr4 (87-139)||(3587920-3587972)
chr4 (88-144)||(16010710-16010766)
[»] chr6 (6 HSPs)
chr6 (87-146)||(22745545-22745604)
chr6 (90-141)||(32577469-32577520)
chr6 (100-144)||(6074526-6074570)
chr6 (95-138)||(6074035-6074078)
chr6 (95-131)||(6073755-6073791)
chr6 (73-145)||(10307474-10307546)
[»] chr7 (1 HSPs)
chr7 (95-140)||(20204247-20204292)
[»] scaffold0330 (1 HSPs)
scaffold0330 (83-140)||(4350-4407)
[»] chr8 (1 HSPs)
chr8 (85-142)||(3066040-3066097)
[»] scaffold0016 (1 HSPs)
scaffold0016 (100-144)||(47336-47380)


Alignment Details
Target: chr2 (Bit Score: 351; Significance: 0; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 397
Target Start/End: Complemental strand, 21186776 - 21186378
Alignment:
Q  1 atactagtatgcggcatccaatttaaatttaaagcgaaatattgcccatcttcagttatgagttatgtctcagacactaactcattgacaccggtaatga 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  21186776 atactagtatgcggcattcaatttaaatttaaagcgaaatattgtccatcttcagttatgagttatgtcccagacactaactcgttgacaccggtaatga 21186677  T
Q  101 tttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtcaaacatcgacactcttgatcaaaggtgtcggtgcttcagagatcttcagaggttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21186676 tttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtcaaacatcgacactcttgatcaaaggtgtcggtgcttcagagatcttcagaggttc 21186577  T
Q  201 catt-gggacaattcataaacaacacgtattttggatatgaaaataaaaaccaaaggattttatttgcagttctctattgatttggtaagcacatgttaa 299  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  21186576 cattggggacaattcataaacaacacgtattttggatatgaaaataaaaaccaaaggattttttttgctgttctgtattgatttggtaagcacatgttaa 21186477  T
Q  300 gttggggtttctgattgtgatcttttgtactttgattta-ttaattttctcctactgattgtgattccaattgtgatttttctataatctgatgatgat 397  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21186476 gttggggtttctgattgtgatcttttgtactttgatttatttaattttctcctactgattgtgattccaattgtgatttttctataatctgattatgat 21186378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 14268791 - 14268735
Alignment:
Q  88 acaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    ||||||||||| |||||||||| ||| ||| ||||||||||| | ||||||||||||    
T  14268791 acaccggtaataatttgagaaaatgacttaattgaacgtaatgatatgtgtcggtgt 14268735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 37232198 - 37232156
Alignment:
Q  102 ttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||| ||| |||||||||||||| |||||||||||||||||||    
T  37232198 ttgataaaatgaattatttgaacataatcacatgtgtcggtgt 37232156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 261
Target Start/End: Original strand, 8335244 - 8335507
Alignment:
Q  5 tagtatgcggcatccaatttaaatttaaagcgaaatattgcccatcttcagttatgagttatgtctcagacactaactcattgacaccggtaatgatttg 104  Q
    |||||||  |||||||| |||||||||||| | |  ||||| |||||||| |||||||||||||| | |||| |||||| |||||||||||||| ||||     
T  8335244 tagtatgtagcatccaacttaaatttaaagtgtatcattgctcatcttcaattatgagttatgtcaccgacattaactcgttgacaccggtaataatttt 8335343  T
Q  105 agaaagtgaattatttgaacgtaatcacatgtgtcggtgtcaaacatc-gacactcttgatcaaaggtgtcggtgcttcagagatcttca-----gaggt 198  Q
    | |||||||||||||||||| ||||||| ||||| ||||||  | | | ||||| ||||||||||||||| ||| ||||| |||||||||     |||||    
T  8335344 ataaagtgaattatttgaacataatcacttgtgtgggtgtcggataccggacacacttgatcaaaggtgttggtacttcaaagatcttcaaaggcgaggt 8335443  T
Q  199 tccattggg-acaattcataaacaacacgtattttggatatgaaaataaaaaccaaaggatttt 261  Q
    ||||||||| ||||||||| || | ||| |||||||||||||||||||||| |||||| |||||    
T  8335444 tccattgggtacaattcattaaaagcacatattttggatatgaaaataaaatccaaagcatttt 8335507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 270 - 391
Target Start/End: Original strand, 8335719 - 8335840
Alignment:
Q  270 ttctctattgatttggtaagcacatgttaagttggggtttctgattgtgatcttttgtactttgatttattaattttctcctactgattgtgattccaat 369  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||||  ||    
T  8335719 ttctctgttgatttggtaagcacatgttaagttggggtttctgtttgtgattttttgtattttgatttattaattttctcctacggattgtgattcagat 8335818  T
Q  370 tgtgatttttctataatctgat 391  Q
    ||| ||||||||||| ||||||    
T  8335819 tgtaatttttctatattctgat 8335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 47542534 - 47542592
Alignment:
Q  86 tgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||| |||||| |||||||||| |||| |||||||| ||||||||||||||||||||    
T  47542534 tgacactggtaataatttgagaaaatgaactatttgaatgtaatcacatgtgtcggtgt 47542592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 18268056 - 18268007
Alignment:
Q  95 taatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  18268056 taataatttgagaaaatgaattaattgaacgtaatcacatgtgtcggtgt 18268007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 21768612 - 21768661
Alignment:
Q  93 ggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggt 142  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  21768612 ggtaataatttgagaaaatgaattatttgaacgtaaccacatgtgtcggt 21768661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 47542767 - 47542811
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||    
T  47542767 atttgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47542811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 47542986 - 47543030
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||    
T  47542986 atttgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 47556433 - 47556477
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||    
T  47556433 atttgagataatgaattatttgaatgtaatcacatgtgtcggtgt 47556477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 15086697 - 15086756
Alignment:
Q  86 tgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtc 145  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15086697 tgacacgggtaataatttgagaaagtgaattatttgaacgtaatcacatgtgttggtgtc 15086756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 15086628 - 15086691
Alignment:
Q  83 cattgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtca 146  Q
    ||||||||||  |||| |||||||||||| ||||||||| |||||||||||||||| |||||||    
T  15086628 cattgacaccaataataatttgagaaagttaattatttgcacgtaatcacatgtgtgggtgtca 15086691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 9895147 - 9895203
Alignment:
Q  87 gacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtg 143  Q
    |||||| ||||| |||||||||| | |||||||||||||||||||||||||| ||||    
T  9895147 gacaccagtaataatttgagaaaataaattatttgaacgtaatcacatgtgttggtg 9895203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 10392959 - 10392909
Alignment:
Q  101 tttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtcaaacat 151  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||    
T  10392959 tttgagaaaatgaattatttgaacgtactcagatgtgtcggtgtcagacat 10392909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 15086832 - 15086884
Alignment:
Q  200 ccattggga-caattcataaacaacacgtattttggatatgaaaataaaaacc 251  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||||||||||||    
T  15086832 ccattgggaacaattcataaacagcacgtggtttggatatgaaaataaaaacc 15086884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 16274402 - 16274347
Alignment:
Q  83 cattgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtc 139  Q
    |||||||||| ||||  |||||||||| ||||||| ||||| |||||||||||||||    
T  16274402 cattgacaccagtaaaaatttgagaaa-tgaattaattgaatgtaatcacatgtgtc 16274347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 28322254 - 28322298
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||||| ||||||| ||||| |||||||||||||| |||||    
T  28322254 atttgagaaaatgaattaattgaatgtaatcacatgtgttggtgt 28322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 843200 - 843150
Alignment:
Q  87 gacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtg 137  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  843200 gacactggtaataatttgagaaaatgaattatttgaacgtaatcacatgtg 843150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 54779167 - 54779210
Alignment:
Q  103 tgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtca 146  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  54779167 tgagaaaatgaattatttgaacgtaatcacatgtgtcagtgtca 54779210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 3587920 - 3587972
Alignment:
Q  87 gacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtc 139  Q
    |||||||| ||| ||||||||||||||| |||||||| |||| ||||||||||    
T  3587920 gacaccggcaataatttgagaaagtgaaatatttgaatgtaaccacatgtgtc 3587972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 16010710 - 16010766
Alignment:
Q  88 acaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    ||||| ||||| |||||||||| | ||| ||||||||| |||||||||||| |||||    
T  16010710 acaccagtaataatttgagaaaataaatcatttgaacgcaatcacatgtgtaggtgt 16010766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 22745604 - 22745545
Alignment:
Q  87 gacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtca 146  Q
    ||||| ||||||||||||||||| |||||||||| |||||||| |||||| || ||||||    
T  22745604 gacactggtaatgatttgagaaaatgaattatttaaacgtaatgacatgtttcagtgtca 22745545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 32577520 - 32577469
Alignment:
Q  90 accggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcgg 141  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  32577520 accggtgatgatttgagaaaatgaattaattgaatgtaatcacatgtgtcgg 32577469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 6074526 - 6074570
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||    
T  6074526 atttgagaaaatgaattagttgaacgtaatcacatgtgttggtgt 6074570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 6074035 - 6074078
Alignment:
Q  95 taatgatttgagaaagtgaattatttgaacgtaatcacatgtgt 138  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||    
T  6074035 taataatttgagaaaatgaattatttgaacgtaatcatatgtgt 6074078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 6073755 - 6073791
Alignment:
Q  95 taatgatttgagaaagtgaattatttgaacgtaatca 131  Q
    |||| |||||||||| |||||||||||||||||||||    
T  6073755 taataatttgagaaaatgaattatttgaacgtaatca 6073791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 10307474 - 10307546
Alignment:
Q  73 gacactaactcattgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgtc 145  Q
    |||||| || ||||||| ||| |||| |||| |||||||||| |  ||||| ||| |||||||||||||||||    
T  10307474 gacactgacacattgactccgataataatttaagaaagtgaacttgttgaatgtagtcacatgtgtcggtgtc 10307546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 20204247 - 20204292
Alignment:
Q  95 taatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcg 140  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||    
T  20204247 taataatttgagaaaatgaatcatttgaacgtaatcacatgtgtcg 20204292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 4350 - 4407
Alignment:
Q  83 cattgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcg 140  Q
    ||||||||| | |||| |||||||||| |||||||||| |||  ||||||||||||||    
T  4350 cattgacactgctaataatttgagaaaatgaattatttaaacacaatcacatgtgtcg 4407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 3066040 - 3066097
Alignment:
Q  85 ttgacaccggtaatgatttgagaaagtgaattatttgaacgtaatcacatgtgtcggt 142  Q
    ||||||| |||||| |||||||||| || |||| ||||| ||||| ||||||||||||    
T  3066040 ttgacacaggtaataatttgagaaaatggattaattgaatgtaataacatgtgtcggt 3066097  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 47336 - 47380
Alignment:
Q  100 atttgagaaagtgaattatttgaacgtaatcacatgtgtcggtgt 144  Q
    |||||||||| || |||| |||||||||| |||||||||||||||    
T  47336 atttgagaaaatgtattaattgaacgtaaacacatgtgtcggtgt 47380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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