View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21622_low_19 (Length: 250)
Name: NF21622_low_19
Description: NF21622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21622_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 31557544 - 31557305
Alignment:
| Q |
1 |
gatactttgataatatgagataagtcttggtccaatatttgatcgataaaaacttctatgctctatgatattgtatctagattaaatgtgaatttttata |
100 |
Q |
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| T |
31557544 |
gatactttgataatatgagataagtcttgatccaacatttgatcgataaaaacttctatgctatatgatattgtatctagattaaatgtgaatttttata |
31557445 |
T |
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| Q |
101 |
aaagcatgctagttggaattaatgtcaataattctcggtttgatgaagtagagtcctttttgagttgcaaagtggaaacaactccgtttgaatatttgag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31557444 |
aaagcatgctagttggaattaatgtcaataattctcgctttgatgaagtagagtcctttttgagttgcaaagtggaaacaactccgtttgaatatttgag |
31557345 |
T |
|
| Q |
201 |
agtatcaattgtgacaaatctagaagattatattcttgga |
240 |
Q |
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|||||||||||||||||| ||| ||||||||||| ||||| |
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| T |
31557344 |
agtatcaattgtgacaaacctaaaagattatatttttgga |
31557305 |
T |
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