View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21627_low_1 (Length: 681)

Name: NF21627_low_1
Description: NF21627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21627_low_1
NF21627_low_1
[»] scaffold0184 (2 HSPs)
scaffold0184 (547-663)||(28729-28845)
scaffold0184 (53-121)||(32148-32216)
[»] scaffold0078 (2 HSPs)
scaffold0078 (547-663)||(43999-44115)
scaffold0078 (53-121)||(40628-40696)
[»] scaffold0247 (1 HSPs)
scaffold0247 (364-507)||(1359-1501)
[»] chr5 (46 HSPs)
chr5 (350-507)||(31062003-31062158)
chr5 (8-147)||(17516533-17516671)
chr5 (8-214)||(2154128-2154332)
chr5 (8-73)||(295911-295975)
chr5 (8-72)||(20909473-20909536)
chr5 (8-147)||(32028100-32028239)
chr5 (8-72)||(39363845-39363908)
chr5 (236-298)||(17300837-17300899)
chr5 (8-142)||(32028294-32028427)
chr5 (11-72)||(264406-264466)
chr5 (8-73)||(20917483-20917547)
chr5 (8-73)||(32028487-32028551)
chr5 (8-72)||(23064975-23065038)
chr5 (8-72)||(39245597-39245660)
chr5 (8-147)||(17516726-17516864)
chr5 (227-282)||(24850786-24850841)
chr5 (53-140)||(27183191-27183278)
chr5 (53-140)||(32950213-32950300)
chr5 (53-140)||(43444031-43444118)
chr5 (8-70)||(20901560-20901621)
chr5 (53-122)||(11212734-11212803)
chr5 (8-73)||(29330444-29330508)
chr5 (8-73)||(32027907-32027971)
chr5 (53-140)||(11342190-11342277)
chr5 (33-196)||(17516870-17517033)
chr5 (53-140)||(22883926-22884013)
chr5 (55-140)||(7424879-7424964)
chr5 (237-282)||(17287978-17288023)
chr5 (40-149)||(39363684-39363793)
chr5 (8-72)||(29346441-29346504)
chr5 (8-72)||(29348914-29348977)
chr5 (8-72)||(29351387-29351450)
chr5 (8-72)||(38619897-38619960)
chr5 (53-140)||(11903-11990)
chr5 (53-140)||(1220366-1220453)
chr5 (53-140)||(18778628-18778715)
chr5 (53-140)||(19499428-19499515)
chr5 (53-140)||(22367117-22367204)
chr5 (53-140)||(25426177-25426264)
chr5 (53-147)||(21074224-21074318)
chr5 (53-122)||(10778832-10778901)
chr5 (33-194)||(20901629-20901790)
chr5 (107-196)||(29346346-29346435)
chr5 (33-73)||(2154461-2154501)
chr5 (4-140)||(35581292-35581427)
chr5 (4-140)||(36990661-36990796)
[»] chr6 (58 HSPs)
chr6 (350-542)||(29483580-29483762)
chr6 (8-214)||(19847468-19847672)
chr6 (8-196)||(1598518-1598705)
chr6 (8-142)||(1925-2058)
chr6 (8-142)||(8884-9017)
chr6 (53-140)||(16556967-16557054)
chr6 (53-140)||(16633523-16633610)
chr6 (53-140)||(16650197-16650284)
chr6 (8-214)||(19005613-19005817)
chr6 (8-73)||(1598711-1598775)
chr6 (8-73)||(30676346-30676410)
chr6 (8-72)||(18334230-18334293)
chr6 (8-72)||(24423008-24423071)
chr6 (8-140)||(26924210-26924341)
chr6 (8-72)||(33864739-33864802)
chr6 (53-140)||(35016026-35016113)
chr6 (8-89)||(2290801-2290881)
chr6 (8-73)||(22981376-22981440)
chr6 (8-73)||(23806968-23807032)
chr6 (33-214)||(34963666-34963846)
chr6 (8-72)||(22782688-22782751)
chr6 (8-72)||(26924085-26924148)
chr6 (53-140)||(16240296-16240383)
chr6 (33-196)||(30676416-30676579)
chr6 (33-147)||(17377603-17377717)
chr6 (8-89)||(8055491-8055571)
chr6 (8-73)||(18914394-18914458)
chr6 (9-214)||(18914588-18914791)
chr6 (8-73)||(25689157-25689221)
chr6 (53-140)||(22226591-22226679)
chr6 (8-72)||(25737104-25737167)
chr6 (53-140)||(25904474-25904562)
chr6 (33-196)||(1540618-1540781)
chr6 (33-196)||(2290887-2291050)
chr6 (33-196)||(18334299-18334462)
chr6 (33-196)||(24422839-24423002)
chr6 (12-147)||(31630103-31630237)
chr6 (33-196)||(33862086-33862249)
chr6 (33-196)||(33864570-33864733)
chr6 (53-135)||(22593609-22593691)
chr6 (53-139)||(25175112-25175198)
chr6 (8-73)||(202-266)
chr6 (55-140)||(19609582-19609667)
chr6 (15-196)||(23415239-23415420)
chr6 (8-69)||(25688964-25689024)
chr6 (46-147)||(26924396-26924497)
chr6 (33-196)||(1598349-1598512)
chr6 (53-140)||(16826390-16826477)
chr6 (53-196)||(25535720-25535863)
chr6 (53-140)||(27654619-27654706)
chr6 (53-140)||(29665374-29665461)
chr6 (15-73)||(27556997-27557055)
chr6 (53-122)||(1555527-1555596)
chr6 (4-140)||(10487923-10488058)
chr6 (4-140)||(16377270-16377405)
chr6 (4-140)||(16384594-16384729)
chr6 (33-73)||(19847797-19847837)
chr6 (53-121)||(19984160-19984228)
[»] chr7 (54 HSPs)
chr7 (367-508)||(11310718-11310859)
chr7 (6-140)||(17985147-17985281)
chr7 (27-214)||(38897724-38897910)
chr7 (8-214)||(16214146-16214350)
chr7 (8-73)||(45847291-45847355)
chr7 (8-72)||(15376351-15376414)
chr7 (8-72)||(16410520-16410583)
chr7 (8-72)||(18628027-18628090)
chr7 (8-72)||(20384761-20384824)
chr7 (8-72)||(26355619-26355682)
chr7 (8-72)||(26358071-26358134)
chr7 (8-72)||(27217322-27217385)
chr7 (8-139)||(8940745-8940875)
chr7 (34-196)||(11303541-11303703)
chr7 (8-73)||(14269400-14269464)
chr7 (15-196)||(25926836-25927017)
chr7 (8-72)||(13869809-13869872)
chr7 (8-196)||(14269470-14269657)
chr7 (8-72)||(18640733-18640796)
chr7 (8-147)||(15081404-15081542)
chr7 (33-196)||(27217153-27217316)
chr7 (8-89)||(456783-456863)
chr7 (11-120)||(11310219-11310327)
chr7 (8-89)||(16232982-16233062)
chr7 (8-73)||(21189232-21189296)
chr7 (53-121)||(1937828-1937896)
chr7 (8-72)||(14156905-14156969)
chr7 (53-140)||(125965-126052)
chr7 (53-140)||(11286976-11287063)
chr7 (33-196)||(15376420-15376583)
chr7 (33-196)||(16410351-16410514)
chr7 (33-196)||(20384830-20384993)
chr7 (15-73)||(1857058-1857116)
chr7 (8-73)||(10501223-10501288)
chr7 (8-89)||(11392920-11393000)
chr7 (33-196)||(14948829-14948992)
chr7 (33-196)||(16232813-16232976)
chr7 (33-196)||(24702521-24702684)
chr7 (33-196)||(24704968-24705131)
chr7 (15-73)||(13918233-13918291)
chr7 (46-196)||(16108395-16108545)
chr7 (33-139)||(16213977-16214083)
chr7 (34-196)||(23664659-23664821)
chr7 (33-142)||(8940572-8940681)
chr7 (53-122)||(15760779-15760848)
chr7 (4-140)||(7821965-7822100)
chr7 (4-140)||(7829276-7829411)
chr7 (76-140)||(10001007-10001071)
chr7 (108-196)||(14269663-14269751)
chr7 (4-140)||(27102534-27102669)
chr7 (4-140)||(27109882-27110017)
chr7 (4-140)||(27175657-27175792)
chr7 (108-196)||(32125858-32125946)
chr7 (4-140)||(38784626-38784761)
[»] scaffold0007 (2 HSPs)
scaffold0007 (350-493)||(163691-163832)
scaffold0007 (350-493)||(160421-160562)
[»] scaffold0014 (2 HSPs)
scaffold0014 (365-501)||(78784-78919)
scaffold0014 (4-217)||(113280-113493)
[»] chr1 (29 HSPs)
chr1 (350-491)||(10812042-10812182)
chr1 (8-214)||(29298703-29298907)
chr1 (8-139)||(22122585-22122715)
chr1 (7-73)||(16401382-16401447)
chr1 (8-73)||(31612827-31612891)
chr1 (8-72)||(13989327-13989390)
chr1 (8-89)||(21474707-21474787)
chr1 (8-73)||(31613020-31613084)
chr1 (8-73)||(10812642-10812706)
chr1 (10-147)||(16274818-16274954)
chr1 (33-214)||(22050526-22050706)
chr1 (8-73)||(27161223-27161287)
chr1 (8-73)||(29777202-29777266)
chr1 (471-542)||(13515896-13515966)
chr1 (33-196)||(13989158-13989321)
chr1 (53-140)||(21858592-21858679)
chr1 (40-147)||(27161342-27161449)
chr1 (40-214)||(9044694-9044867)
chr1 (53-121)||(44035860-44035928)
chr1 (45-196)||(21841071-21841222)
chr1 (33-196)||(21922998-21923161)
chr1 (33-196)||(29535344-29535507)
chr1 (495-542)||(35568981-35569028)
chr1 (108-214)||(43543269-43543374)
chr1 (15-140)||(21180724-21180849)
chr1 (33-142)||(29777033-29777142)
chr1 (33-73)||(13227156-13227196)
chr1 (33-73)||(16275086-16275126)
chr1 (4-140)||(17003861-17003996)
[»] scaffold0574 (2 HSPs)
scaffold0574 (8-192)||(6913-7096)
scaffold0574 (45-196)||(6756-6907)
[»] scaffold0151 (2 HSPs)
scaffold0151 (8-155)||(36946-37092)
scaffold0151 (8-147)||(36761-36899)
[»] chr2 (52 HSPs)
chr2 (8-147)||(21154570-21154708)
chr2 (8-147)||(24529109-24529247)
chr2 (8-214)||(22105927-22106131)
chr2 (7-196)||(23706539-23706727)
chr2 (8-147)||(6726509-6726647)
chr2 (8-147)||(24918602-24918740)
chr2 (8-147)||(41523442-41523580)
chr2 (8-73)||(24681906-24681970)
chr2 (8-73)||(41523709-41523773)
chr2 (8-72)||(18809404-18809467)
chr2 (8-72)||(23131323-23131386)
chr2 (8-72)||(23133790-23133853)
chr2 (8-72)||(23711651-23711714)
chr2 (8-72)||(32039136-32039199)
chr2 (8-72)||(34402160-34402223)
chr2 (33-196)||(22105758-22105921)
chr2 (8-89)||(571859-571939)
chr2 (8-73)||(24642385-24642449)
chr2 (11-72)||(26505843-26505903)
chr2 (11-72)||(26508321-26508381)
chr2 (8-89)||(39682775-39682855)
chr2 (8-124)||(24671487-24671602)
chr2 (8-72)||(28577560-28577623)
chr2 (8-147)||(24368288-24368426)
chr2 (33-196)||(39682606-39682769)
chr2 (33-147)||(571690-571804)
chr2 (34-196)||(20261513-20261675)
chr2 (8-70)||(45027544-45027605)
chr2 (8-69)||(23708980-23709040)
chr2 (8-73)||(23709169-23709233)
chr2 (40-196)||(24671325-24671481)
chr2 (24-72)||(27920402-27920450)
chr2 (47-122)||(16900809-16900884)
chr2 (47-122)||(16994200-16994275)
chr2 (33-196)||(18809235-18809398)
chr2 (53-140)||(19887297-19887384)
chr2 (33-196)||(23711720-23711883)
chr2 (8-147)||(23931922-23932060)
chr2 (53-140)||(24686620-24686707)
chr2 (94-140)||(24302325-24302371)
chr2 (15-73)||(31345471-31345529)
chr2 (33-139)||(32214694-32214800)
chr2 (33-196)||(24368119-24368282)
chr2 (53-132)||(27261332-27261411)
chr2 (7-73)||(23706854-23706919)
chr2 (53-122)||(12727711-12727780)
chr2 (107-196)||(26508223-26508312)
chr2 (4-140)||(11232235-11232370)
chr2 (4-140)||(22514082-22514217)
chr2 (33-73)||(23707046-23707086)
chr2 (33-73)||(24918433-24918473)
chr2 (4-140)||(28776684-28776819)
[»] scaffold0322 (1 HSPs)
scaffold0322 (8-214)||(18399-18603)
[»] chr4 (47 HSPs)
chr4 (8-214)||(18214700-18214904)
chr4 (8-142)||(19617634-19617767)
chr4 (8-141)||(362835-362967)
chr4 (8-196)||(14746025-14746212)
chr4 (8-147)||(3515469-3515607)
chr4 (8-139)||(14970277-14970407)
chr4 (8-139)||(15495744-15495874)
chr4 (8-147)||(52313216-52313354)
chr4 (8-214)||(52872569-52872773)
chr4 (8-72)||(15117990-15118053)
chr4 (8-196)||(19858040-19858227)
chr4 (53-140)||(14951270-14951357)
chr4 (8-73)||(14745955-14746019)
chr4 (8-196)||(362642-362829)
chr4 (8-72)||(7640824-7640887)
chr4 (7-142)||(14185596-14185730)
chr4 (11-70)||(44772723-44772781)
chr4 (12-139)||(52313027-52313153)
chr4 (34-196)||(15534475-15534637)
chr4 (7-73)||(22725361-22725426)
chr4 (34-196)||(36038164-36038326)
chr4 (8-89)||(1837140-1837220)
chr4 (55-140)||(55377208-55377293)
chr4 (53-121)||(25120076-25120144)
chr4 (33-196)||(3515300-3515463)
chr4 (53-140)||(8374040-8374127)
chr4 (53-140)||(10643746-10643833)
chr4 (33-196)||(14970413-14970576)
chr4 (33-196)||(15118059-15118222)
chr4 (53-140)||(18247739-18247826)
chr4 (53-140)||(22355082-22355169)
chr4 (53-140)||(43281708-43281795)
chr4 (53-139)||(17146303-17146389)
chr4 (15-149)||(20595821-20595955)
chr4 (53-122)||(5683396-5683465)
chr4 (55-140)||(15287881-15287966)
chr4 (55-140)||(15294991-15295076)
chr4 (53-140)||(18168293-18168380)
chr4 (29-72)||(18239250-18239293)
chr4 (53-140)||(19020009-19020096)
chr4 (33-196)||(52872779-52872942)
chr4 (33-147)||(19857871-19857985)
chr4 (243-300)||(5064883-5064940)
chr4 (107-196)||(7640893-7640982)
chr4 (33-73)||(14746341-14746381)
chr4 (33-73)||(18214998-18215038)
chr4 (33-73)||(19617896-19617936)
[»] chr3 (54 HSPs)
chr3 (11-147)||(36528427-36528562)
chr3 (11-140)||(3264323-3264451)
chr3 (8-147)||(38961400-38961538)
chr3 (24-199)||(55319007-55319182)
chr3 (8-214)||(55318800-55319004)
chr3 (15-196)||(15465429-15465610)
chr3 (7-147)||(14567447-14567586)
chr3 (8-72)||(17463639-17463702)
chr3 (8-72)||(34159787-34159850)
chr3 (8-72)||(55476952-55477015)
chr3 (8-139)||(8499982-8500112)
chr3 (8-147)||(13937535-13937673)
chr3 (53-140)||(30152450-30152537)
chr3 (8-147)||(53301066-53301204)
chr3 (8-214)||(27165714-27165918)
chr3 (8-73)||(10557370-10557434)
chr3 (8-73)||(15007964-15008028)
chr3 (8-73)||(16282394-16282458)
chr3 (8-73)||(20629828-20629892)
chr3 (8-73)||(41124401-41124465)
chr3 (8-72)||(6468772-6468835)
chr3 (8-72)||(15412892-15412955)
chr3 (53-132)||(51158674-51158753)
chr3 (471-541)||(15080413-15080483)
chr3 (8-70)||(17393176-17393238)
chr3 (33-147)||(24513969-24514083)
chr3 (33-214)||(12119343-12119523)
chr3 (8-89)||(13151411-13151491)
chr3 (8-89)||(13153876-13153956)
chr3 (8-73)||(17444400-17444464)
chr3 (15-140)||(26055027-26055152)
chr3 (8-89)||(45606527-45606607)
chr3 (8-73)||(46822723-46822787)
chr3 (53-140)||(14528647-14528734)
chr3 (33-196)||(15977825-15977988)
chr3 (33-196)||(17463470-17463633)
chr3 (53-140)||(28557370-28557457)
chr3 (33-196)||(34159618-34159781)
chr3 (53-196)||(45606613-45606756)
chr3 (33-147)||(10379620-10379734)
chr3 (33-147)||(46822554-46822668)
chr3 (53-122)||(16934851-16934920)
chr3 (237-296)||(10710348-10710407)
chr3 (33-196)||(20629898-20630061)
chr3 (53-140)||(25058298-25058385)
chr3 (53-140)||(49231768-49231855)
chr3 (55-122)||(54039167-54039234)
chr3 (12-142)||(16358235-16358364)
chr3 (8-69)||(10247364-10247424)
chr3 (107-196)||(10247430-10247519)
chr3 (107-196)||(16453987-16454076)
chr3 (4-140)||(1468636-1468771)
chr3 (64-140)||(8023799-8023875)
chr3 (64-140)||(8631319-8631395)
[»] scaffold0317 (2 HSPs)
scaffold0317 (8-215)||(6431-6636)
scaffold0317 (33-196)||(6642-6805)
[»] scaffold0278 (3 HSPs)
scaffold0278 (8-139)||(8201-8331)
scaffold0278 (45-196)||(8044-8195)
scaffold0278 (8-73)||(8394-8458)
[»] chr8 (48 HSPs)
chr8 (8-147)||(27471979-27472117)
chr8 (8-214)||(32122190-32122394)
chr8 (8-196)||(15202692-15202879)
chr8 (8-196)||(16412829-16413016)
chr8 (8-147)||(15071022-15071160)
chr8 (8-147)||(19896783-19896921)
chr8 (8-72)||(1484863-1484926)
chr8 (8-72)||(5852930-5852993)
chr8 (8-72)||(14409082-14409145)
chr8 (8-72)||(20045833-20045896)
chr8 (53-140)||(15320011-15320098)
chr8 (53-140)||(15500380-15500467)
chr8 (15-196)||(14397447-14397628)
chr8 (8-89)||(14824236-14824316)
chr8 (8-73)||(19896976-19897040)
chr8 (8-73)||(20403741-20403805)
chr8 (8-73)||(38549641-38549705)
chr8 (8-72)||(4483741-4483804)
chr8 (8-196)||(38549326-38549512)
chr8 (8-63)||(3844554-3844609)
chr8 (24-147)||(16401294-16401417)
chr8 (33-196)||(16413022-16413185)
chr8 (11-73)||(15202622-15202683)
chr8 (8-73)||(19936544-19936608)
chr8 (64-140)||(24624245-24624321)
chr8 (33-196)||(1484694-1484857)
chr8 (33-196)||(14409151-14409314)
chr8 (8-63)||(16401186-16401240)
chr8 (53-140)||(22089395-22089482)
chr8 (8-214)||(24049072-24049276)
chr8 (41-147)||(45290397-45290503)
chr8 (53-122)||(29759429-29759498)
chr8 (8-196)||(16401438-16401625)
chr8 (33-149)||(18677818-18677934)
chr8 (53-149)||(22146977-22147073)
chr8 (33-196)||(5852999-5853162)
chr8 (53-140)||(17150638-17150725)
chr8 (53-140)||(22007108-22007195)
chr8 (33-147)||(27472172-27472286)
chr8 (33-147)||(32122021-32122135)
chr8 (107-196)||(4542080-4542169)
chr8 (227-300)||(9416117-9416189)
chr8 (53-122)||(13663129-13663198)
chr8 (4-140)||(272186-272321)
chr8 (4-140)||(643528-643663)
chr8 (4-140)||(829334-829469)
chr8 (33-73)||(1326761-1326801)
chr8 (33-73)||(25657982-25658022)
[»] scaffold1792 (3 HSPs)
scaffold1792 (5-139)||(826-959)
scaffold1792 (8-73)||(669-733)
scaffold1792 (40-139)||(507-606)
[»] scaffold0306 (3 HSPs)
scaffold0306 (8-215)||(10834-11040)
scaffold0306 (8-73)||(15374-15438)
scaffold0306 (33-73)||(11169-11209)
[»] scaffold0044 (4 HSPs)
scaffold0044 (8-75)||(40861-40927)
scaffold0044 (484-535)||(4813-4864)
scaffold0044 (23-140)||(37831-37946)
scaffold0044 (45-196)||(40704-40855)
[»] scaffold0230 (3 HSPs)
scaffold0230 (5-139)||(22941-23074)
scaffold0230 (8-73)||(23167-23231)
scaffold0230 (40-139)||(23294-23393)
[»] scaffold0716 (1 HSPs)
scaffold0716 (8-73)||(5156-5220)
[»] scaffold0040 (1 HSPs)
scaffold0040 (8-73)||(43201-43265)
[»] scaffold1296 (1 HSPs)
scaffold1296 (8-140)||(1716-1847)
[»] scaffold0444 (1 HSPs)
scaffold0444 (8-140)||(13854-13985)
[»] scaffold0134 (2 HSPs)
scaffold0134 (8-72)||(38283-38346)
scaffold0134 (33-196)||(38114-38277)
[»] scaffold0023 (3 HSPs)
scaffold0023 (8-72)||(94872-94935)
scaffold0023 (8-73)||(17076-17140)
scaffold0023 (33-147)||(17195-17309)
[»] scaffold0001 (2 HSPs)
scaffold0001 (11-147)||(501529-501664)
scaffold0001 (33-147)||(501358-501471)
[»] scaffold0107 (1 HSPs)
scaffold0107 (53-140)||(30470-30557)
[»] scaffold0741 (3 HSPs)
scaffold0741 (8-73)||(3939-4003)
scaffold0741 (24-73)||(3553-3602)
scaffold0741 (8-73)||(3746-3810)
[»] scaffold0711 (3 HSPs)
scaffold0711 (8-73)||(7519-7583)
scaffold0711 (11-73)||(7327-7388)
scaffold0711 (8-73)||(7134-7198)
[»] scaffold0333 (1 HSPs)
scaffold0333 (4-93)||(213-302)
[»] scaffold0043 (2 HSPs)
scaffold0043 (8-73)||(10253-10317)
scaffold0043 (8-147)||(10446-10584)
[»] scaffold1404 (1 HSPs)
scaffold1404 (53-140)||(1375-1462)
[»] scaffold0266 (1 HSPs)
scaffold0266 (53-140)||(725-812)
[»] scaffold0035 (2 HSPs)
scaffold0035 (53-140)||(110087-110174)
scaffold0035 (53-140)||(118588-118675)
[»] scaffold0747 (2 HSPs)
scaffold0747 (45-147)||(894-996)
scaffold0747 (8-73)||(1051-1115)
[»] scaffold0149 (2 HSPs)
scaffold0149 (8-70)||(30481-30542)
scaffold0149 (33-73)||(30312-30352)
[»] scaffold0200 (1 HSPs)
scaffold0200 (15-196)||(17928-18109)
[»] scaffold0051 (1 HSPs)
scaffold0051 (15-196)||(31478-31659)
[»] scaffold0138 (1 HSPs)
scaffold0138 (17-73)||(33448-33504)
[»] scaffold1753 (1 HSPs)
scaffold1753 (53-140)||(868-955)
[»] scaffold0613 (1 HSPs)
scaffold0613 (237-300)||(2528-2591)
[»] scaffold0383 (1 HSPs)
scaffold0383 (53-140)||(1959-2046)
[»] scaffold0335 (1 HSPs)
scaffold0335 (53-140)||(6218-6305)
[»] scaffold0126 (1 HSPs)
scaffold0126 (237-300)||(33111-33174)
[»] scaffold0039 (1 HSPs)
scaffold0039 (53-140)||(19922-20009)
[»] scaffold0396 (1 HSPs)
scaffold0396 (53-135)||(12508-12590)
[»] scaffold0034 (3 HSPs)
scaffold0034 (53-123)||(45448-45518)
scaffold0034 (53-140)||(39965-40052)
scaffold0034 (53-140)||(79003-79090)
[»] scaffold0436 (1 HSPs)
scaffold0436 (12-140)||(8290-8418)
[»] scaffold0686 (1 HSPs)
scaffold0686 (53-140)||(6952-7039)
[»] scaffold0338 (1 HSPs)
scaffold0338 (53-140)||(8566-8653)
[»] scaffold0315 (1 HSPs)
scaffold0315 (53-140)||(18205-18292)
[»] scaffold0213 (1 HSPs)
scaffold0213 (53-140)||(28469-28556)
[»] scaffold0191 (1 HSPs)
scaffold0191 (53-140)||(8105-8192)
[»] scaffold0117 (1 HSPs)
scaffold0117 (17-196)||(39609-39788)
[»] scaffold0342 (1 HSPs)
scaffold0342 (53-139)||(1279-1365)
[»] scaffold0074 (1 HSPs)
scaffold0074 (53-147)||(38411-38505)
[»] scaffold0494 (1 HSPs)
scaffold0494 (33-214)||(213-393)
[»] scaffold0114 (1 HSPs)
scaffold0114 (33-73)||(28134-28174)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-140)||(38327-38462)
[»] scaffold0064 (1 HSPs)
scaffold0064 (33-73)||(68254-68294)
[»] scaffold0059 (1 HSPs)
scaffold0059 (33-73)||(57774-57814)


Alignment Details
Target: scaffold0184 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 547 - 663
Target Start/End: Original strand, 28729 - 28845
Alignment:
Q  547 aaaccttaatgggcctctaaaactcatgtcactaaattttcaaaagttattacactcacttaaatttttgatcatcttaatttgtttataagaagt-ggg 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||    
T  28729 aaaccttaatgggcctctaaaactcatgtcactaaattttcaaaagttattacactcgcttaaa-tttggatcatcttaatttgtttataagaagtgggg 28827  T
Q  646 caccttggccggatggtt 663  Q
    ||||||||||||||||||    
T  28828 caccttggccggatggtt 28845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 32216 - 32148
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||||||  ||||||| | |||||||||||||| |||| ||||||||||||||||    
T  32216 agtaatttgatcataactcaagttctaaaaatcatttggacgttaaaccaaagccattagaaagctaac 32148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 547 - 663
Target Start/End: Complemental strand, 44115 - 43999
Alignment:
Q  547 aaaccttaatgggcctctaaaactcatgtcactaaattttcaaaagttattacactcacttaaatttttgatcatcttaatttgtttataagaagt-ggg 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||    
T  44115 aaaccttaatgggcctctaaaactcatgtcactaaattttcaaaagttattacactcgcttaaa-tttggatcatcttaatttgtttataagaagtgggg 44017  T
Q  646 caccttggccggatggtt 663  Q
    ||||||||||||||||||    
T  44016 caccttggccggatggtt 43999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 40628 - 40696
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||||||  ||||||| | |||||||||||||| |||| ||||||||||||||||    
T  40628 agtaatttgatcataactcaagttctaaaaatcatttggacgttaaaccaaagccattagaaagctaac 40696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 364 - 507
Target Start/End: Complemental strand, 1501 - 1359
Alignment:
Q  364 ccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattacccactaattaggag 463  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||||||||||||||||    
T  1501 ccaaaaaccacttattatgaatcaaaagcatgaatatgaacatgttaattcaccaattcaac-aaaattagtatacacataattacccactaattaggag 1403  T
Q  464 catgaatttcaccaaacaaaatcatcaatttatcaattcaacaa 507  Q
     | ||||||||| ||||||||||||||||| |||||||||||||    
T  1402 tacgaatttcacaaaacaaaatcatcaattcatcaattcaacaa 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 4e-43; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 350 - 507
Target Start/End: Original strand, 31062003 - 31062158
Alignment:
Q  350 ttaagtaaaaatcaccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattac 449  Q
    ||||| ||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| | |||| ||||||||||    
T  31062003 ttaagcaaaaatc-ccaaaaaccacttattatgaatcaaaagcatgaatatgaacatgttaattcaccaattcaa-gaaaattagtatacacataattac 31062100  T
Q  450 ccactaattaggagcatgaatttcaccaaacaaaatcatcaatttatcaattcaacaa 507  Q
    |||||||||||||| | ||||||||| ||| ||||||||||||| |||||||||||||    
T  31062101 ccactaattaggagtacgaatttcacaaaataaaatcatcaattcatcaattcaacaa 31062158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 17516671 - 17516533
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||  |||| || |  ||| ||| | | | |||   |    
T  17516671 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgaagtaatttgaccataactcaagttctataaatcgttttgacatcagaccaacggc 17516573  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  17516572 attagaaagctaacatccatacctacaactttcgtgttta 17516533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 2154332 - 2154128
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||| |||||| ||  |||| || |  ||| ||||| | | |||   |    
T  2154332 aaagttgtgctgaaatt-cataaaaattcaccgtgacatacgtgcagtaatttgactataacttaagttctataaatcgttttgacgtcagaccaacgac 2154234  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||| ||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||||||| || |||    
T  2154233 attaaaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatttggg-gcagag 2154135  T
Q  208 atgaaaa 214  Q
    |||||||    
T  2154134 atgaaaa 2154128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 295975 - 295911
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  295975 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 295911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 20909473 - 20909536
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  20909473 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 20909536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 32028100 - 32028239
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgt-taaatcaaatc 106  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||  |||| || |  ||| |||||  ||| |||       
T  32028100 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatttgaccataactcaagctctataaatcgttttgacgtcaaaaccaacgg 32028198  T
Q  107 cattagaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||||||||||||  || ||||||||||||| ||||    
T  32028199 cattagaaagctaacatccatacctacaactttcgtgttta 32028239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 39363845 - 39363908
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  39363845 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 39363908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 17300899 - 17300837
Alignment:
Q  236 aaaacttcacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaaca 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||   |||||||||||||    
T  17300899 aaaacttcacaattatcatcttcaaattcatgaattctcatcaacaacatatacccaacaaca 17300837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 32028294 - 32028427
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  32028294 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaagctctataaattgttttgacgtcagaccaacagc 32028392  T
Q  108 attagaaagctaacatctttatctacaactttcgt 142  Q
    | |||||||||||||| | || |||||||||||||    
T  32028393 actagaaagctaacatatatacctacaactttcgt 32028427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 264466 - 264406
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    |||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  264466 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 264406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 20917547 - 20917483
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  20917547 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgtagtaatttgaccataactcaa 20917483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 32028487 - 32028551
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  32028487 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatttgaccataactcaa 32028551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 23064975 - 23065038
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||| ||||||||||||    
T  23064975 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaattggaccataactca 23065038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 39245597 - 39245660
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||| ||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  39245597 aaagttgtgctcaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 39245660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 17516864 - 17516726
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| ||||||| ||| |||||||||  |||| || |  ||| ||||| | | |||   |    
T  17516864 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaattcgacgataactcaagttctataaatctttttgacgtcagaccaacgac 17516766  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  17516765 attagaaagctaacatccatacctacaactttcgtgttta 17516726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 24850841 - 24850786
Alignment:
Q  227 caacttgttaaaacttcacatttatcatcttcaagttcatgaattctcatcaacaa 282  Q
    |||||| || |||||||||||||||||||||||| ||||| |||||||||||||||    
T  24850841 caacttattcaaacttcacatttatcatcttcaatttcataaattctcatcaacaa 24850786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 27183278 - 27183191
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  27183278 agtaatttgatcataactcaagttctaaaaatcatttggaagtcaaaccaaagccattagaaagctaacataattatctaaaactttc 27183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 32950213 - 32950300
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||| | ||||||| | |||||||||| ||| |||| ||||||||||||||||||   |||||| |||||||    
T  32950213 agtaatttgatcataactcacattctaaaaattatttggacgtcaaaccaaagccattagaaagctaacataactatctaaaactttc 32950300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 43444118 - 43444031
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | ||||||||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   |||||||||||||||    
T  43444118 agtaatttaatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaagttatctacaactttc 43444031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 20901621 - 20901560
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataact 70  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||    
T  20901621 aaagttgtgttgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataact 20901560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 11212803 - 11212734
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||||||||| |||| |||| ||||||||||||    
T  11212803 agtaatttgatcataactcaagttctaaaaatcatttggacgttaaaccaaagccataagaaagctaaca 11212734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 29330444 - 29330508
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| ||||  |||||| | |||||||||||||||||||    
T  29330444 aaagttgtgctgaaatt-cataaaaattcactgtgacatacgtgcattaatttgaccataactcaa 29330508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 32027907 - 32027971
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  ||||  |||||| |||||||||||||||||||||    
T  32027907 aaagttgtgctgaaatt-cataaaaattcattgtgacttacgtgcagtaatttgaccataactcaa 32027971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 11342190 - 11342277
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||| |  |||||||||||||||    
T  11342190 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacttaattatctacaactttc 11342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 17517033 - 17516870
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||    
T  17517033 attcactgtgacctacgtgcagtaatttgacgataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccataccta 17516934  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  17516933 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 17516870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22884013 - 22883926
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||| |||| ||| |||| ||||||||||||||||||  ||| ||| |||||||    
T  22884013 agtaatttgatcataactcaagttctaaaaatcatttgaacgtcaaaccaaagccattagaaagctaacataattacctaaaactttc 22883926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 7424879 - 7424964
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| |||| |||||  ||||||| | |||||||||| ||| |||| ||||||||||||||| |   |||||||||||||||    
T  7424879 taatttgatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaataaaattatctacaactttc 7424964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 17288023 - 17287978
Alignment:
Q  237 aaacttcacatttatcatcttcaagttcatgaattctcatcaacaa 282  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||    
T  17288023 aaacttcacaattataatcttcaaattcatgaattctcatcaacaa 17287978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 39363684 - 39363793
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||  |||||||||||||||||||||  |||| || | |||| || || |||||||   || |||||||||||||||  || ||||||||||    
T  39363684 gtgacctacgttcagtaatttgaccataactcaagttctataaatcattttgaagtcaaatcaacggcactagaaagctaacatccatacctacaacttt 39363783  T
Q  140 cgtttttata 149  Q
    ||| ||||||    
T  39363784 cgtgtttata 39363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 29346441 - 29346504
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| |||||||||||||   || || |||| ||||||||||||||||||||    
T  29346441 aaagttgtgctgaaatt-cataaaaattcactaagacctccgtgcagtaatttgaccataactca 29346504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 29348914 - 29348977
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| |||||||||||||   || || |||| ||||||||||||||||||||    
T  29348914 aaagttgtgctgaaatt-cataaaaattcactaagacctccgtgcagtaatttgaccataactca 29348977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 29351387 - 29351450
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| |||||||||||||   || || |||| ||||||||||||||||||||    
T  29351387 aaagttgtgctgaaatt-cataaaaattcactaagacctccgtgcagtaatttgaccataactca 29351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 38619897 - 38619960
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||| ||||  |||| ||||||| ||||||| ||||||||||||    
T  38619897 aaagttgtgctgaaatt-cataaaatttcattgtgacctacgtgcagtaattggaccataactca 38619960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 11903 - 11990
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||  |||||||||||||||||   |||||||||||||||    
T  11903 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaatgccattagaaagctaacaaaattatctacaactttc 11990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 1220453 - 1220366
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||   ||||||| |||||||    
T  1220453 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaacaaaattatctaaaactttc 1220366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 18778715 - 18778628
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||| ||||||   |||||||||||||||    
T  18778715 agtaatttaatcatatctcaagttctaaaaatcatttggacgtaaaaccaaagccattagaaatctaacaaaattatctacaactttc 18778628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 19499428 - 19499515
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| | |||||||||||||||   |||||||||||||||    
T  19499428 agtaatttaatcatatctcaagttctaaaactcatttggacgtcaaaccaaagctattagaaagctaacaaaattatctacaactttc 19499515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22367204 - 22367117
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  | ||||| | |||||||||| ||| |||| |||||||||||||||||   |||||||||||||||    
T  22367204 agtaatttaatcatatctcaagttttaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctacaactttc 22367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 25426177 - 25426264
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||  |||||||||||||||||   |||||||||||||||    
T  25426177 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaatgccattagaaagctaacaaaattatctacaactttc 25426264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 21074318 - 21074224
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||  |||||||||||||||||   ||||||| ||||||| ||||||    
T  21074318 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaatgccattagaaagctaacaaaattatctaaaactttcattttta 21074224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 10778901 - 10778832
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||    
T  10778901 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaaca 10778832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 20901790 - 20901629
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||| ||||||||  || |||    
T  20901790 attcacagtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaatctaacatccataccta 20901691  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaa 194  Q
    |||||||| | |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||    
T  20901690 caactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaa 20901629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 29346346 - 29346435
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  29346346 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 29346435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 2154501 - 2154461
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  2154501 attcactgtgacctacgtgcagtaatttgaccataactcaa 2154461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 35581292 - 35581427
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  35581292 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 35581390  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  35581391 cgccattagaaagctaacaaaattatctaaaactttc 35581427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 36990796 - 36990661
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  36990796 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 36990698  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  36990697 cgccattagaaagctaacaaaattatctaaaactttc 36990661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 6e-42; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 350 - 542
Target Start/End: Complemental strand, 29483762 - 29483580
Alignment:
Q  350 ttaagtaaaaatcaccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattac 449  Q
    ||||| ||||||||| |||||| ||| ||||| ||||||||| ||||||||||||||||||||||| ||||||| | ||||| | |||| ||||||||||    
T  29483762 ttaagcaaaaatcac-aaaaaccacttattataaaccaaaagaatgaatatgaacatgttaattcatcaattcagcaaaaattagtatacacataattac 29483664  T
Q  450 ccactaattaggagcatgaatttcaccaaacaaaatcatcaatttatcaattcaacaattaatcataagctaaaacaagaagaaaagtgatta 542  Q
    |||||||||| ||||| |||||||||||||||||||||||        |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  29483663 ccactaattatgagcacgaatttcaccaaacaaaatcatc--------aattcaacaattgatcataagctagaacaa-aagaaaagtgatta 29483580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 19847672 - 19847468
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| ||||| | |  ||   |    
T  19847672 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgacgataactcaagttctataaatcgttttgacgtcagactaatggc 19847574  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||||| ||| | ||| || || ||  |||| ||||| ||| ||||||||||||||| || |||    
T  19847573 attagaaagctaacatccatacctacaactttcgtgtttatacctaggaccaattatgtaccaatcaataccagttttcatttcaaatttggg-gcagag 19847475  T
Q  208 atgaaaa 214  Q
    |||||||    
T  19847474 atgaaaa 19847468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 1598518 - 1598705
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || | | |||   |    
T  1598518 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaattgttttgatgtcataccaacggc 1598616  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || ||||||||||||| |||||| ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  1598617 attagaaagctaacatccatacctacaactttcgtgtttatacctaagaccatttatgtaccaatcaataccagttttcatttcaaatt 1598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 2058 - 1925
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  2058 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 1960  T
Q  108 attagaaagctaacatctttatctacaactttcgt 142  Q
    |||||||||||||||||  || |||||||||||||    
T  1959 attagaaagctaacatccatacctacaactttcgt 1925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 9017 - 8884
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  9017 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 8919  T
Q  108 attagaaagctaacatctttatctacaactttcgt 142  Q
    |||||||||||||||||  || |||||||||||||    
T  8918 attagaaagctaacatccatacctacaactttcgt 8884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 16557054 - 16556967
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||||||| |||| ||||||||||||||||||  ||||||| |||||||    
T  16557054 agtaatttgatcataactcaagttctaaaaatcatttggacgttaaaccaaagccattagaaagctaacataattatctaaaactttc 16556967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 16633610 - 16633523
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||||||| |||| ||||||||||||||||||  ||||||| |||||||    
T  16633610 agtaatttgatcataactcaagttctaaaaatcatttggacgttaaaccaaagccattagaaagctaacataattatctaaaactttc 16633523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 16650284 - 16650197
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||||| |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  16650284 agtaatttgatcataactcaagttctaaaattcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 16650197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 19005613 - 19005817
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||||||||  |||| || |  ||| || || | | |||   |    
T  19005613 aaagatgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaacataactcaagttctataaatcgttttgaagtcagaccaacgac 19005711  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || |||||||||| || |||| | ||| | ||| ||||| ||| |||| |||||| || ||||||||||| ||| || |||    
T  19005712 attagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtactaatcaataccaaatttcatttcaaattcggg-gcagag 19005810  T
Q  208 atgaaaa 214  Q
    |||||||    
T  19005811 atgaaaa 19005817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 1598711 - 1598775
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  1598711 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 1598775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 30676410 - 30676346
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  30676410 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 30676346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 18334293 - 18334230
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  18334293 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 18334230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 24423008 - 24423071
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  24423008 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 24423071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 26924341 - 26924210
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  26924341 aaagttgtgctgaaatt-cataaaaattaactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 26924243  T
Q  108 attagaaagctaacatctttatctacaactttc 140  Q
    |||||||||||||||| | || |||||||||||    
T  26924242 attagaaagctaacatttatacctacaactttc 26924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 33864739 - 33864802
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  33864739 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 33864802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 35016113 - 35016026
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  35016113 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaagcaaagccattagaaagctaacataattatctaaaactttc 35016026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 2290881 - 2290801
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | |||||| ||||    
T  2290881 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccttaactcataaaccaaaattcattt 2290801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 22981440 - 22981376
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||| ||||||||||||    
T  22981440 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttaaccataactcaa 22981376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 23806968 - 23807032
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||| ||||||||||||    
T  23806968 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttaaccataactcaa 23807032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 34963666 - 34963846
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||||||| ||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  34963666 attcactgtgatctatgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacgacattagaaagctaacatccataccta 34963765  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
    |||||||| | |||| | ||| | ||| ||||| ||  |||| ||||| ||| ||||||||||| ||| || ||||||||||    
T  34963766 caactttcatgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggg-gcagagatgaaaa 34963846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 22782688 - 22782751
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || ||||||||||||||||||||    
T  22782688 aaagttgtgctgaaatt-cataaaaattcactgtgacctacatgcagtaatttgaccataactca 22782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 26924148 - 26924085
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || ||||||||||||||||||||    
T  26924148 aaagttgtgctgaaatt-cataaaaattcactgtgacctacatgcagtaatttgaccataactca 26924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 16240296 - 16240383
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||   |||||| | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  16240296 agtaatttgatcataactcaagtcctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 16240383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 30676579 - 30676416
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| |||||||||||||||| ||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  30676579 attcactgtgacctacgtgaagtaattttaccataactcaagttctataaattattttgaagtcaaaccaacggcattagaaagctaacatccataccta 30676480  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  30676479 caactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 30676416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 17377717 - 17377603
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || || ||| || || ||| |||   ||||||||||||||||||  || |||    
T  17377717 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatacttttgaagtcaaaccaatggcattagaaagctaacatccataccta 17377618  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  17377617 caactttcgtgttta 17377603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 8055491 - 8055571
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  8055491 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 8055571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 18914394 - 18914458
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| |||| ||||||||||||||||    
T  18914394 aaagttgtgctgaaatt-cataaaaattgactgtgacctacgtgcagtactttgaccataactcaa 18914458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 18914588 - 18914791
Alignment:
Q  9 aagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcca 108  Q
    |||||||||| ||||| ||||||| || || |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || | | |||   ||    
T  18914588 aagttgtgctaaaatt-cataaaagtttactgtgacctacgtgcagtaatttgaccataactcaagttctataaatttttttgatgtcagaccaacgaca 18914686  T
Q  109 ttagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgaga 208  Q
    ||||||| ||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||| |||| |||||  || ||||||||||| ||| || ||||    
T  18914687 ttagaaatctaacatttatacctacaactttcgtgtttacacctaagaccaattctggacttatcaataccagatttcatttcaaattcggg-gcagaga 18914785  T
Q  209 tgaaaa 214  Q
    ||||||    
T  18914786 tgaaaa 18914791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 25689157 - 25689221
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||| ||| |||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  25689157 aaagttgtgctgatatt-cataaaaattcactatgacctacgtgcagtaatttgaccataactcaa 25689221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22226679 - 22226591
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaat-taatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  |||||||  | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  22226679 agtaatttgatcataactcaagttctaaaaaatcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 22226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 25737104 - 25737167
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || |||||| |||||||||||||    
T  25737104 aaagttgtgctgaaatt-cataaaaattcactgtgacctacatgcagtaatatgaccataactca 25737167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 25904474 - 25904562
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaat-taatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  |||||||  | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  25904474 agtaatttgatcataactcaagttctaaaaaatcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 25904562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 1540781 - 1540618
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  1540781 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 1540682  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||  ||  |||| ||||| |||||||||||||||    
T  1540681 caactttcgtgtttacacctaagaccaattctataccaatcaataccagtttgcatttcaaatt 1540618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 2291050 - 2290887
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| ||||||| |  |||| || |  ||| || || ||| |||   ||||||||||||||||| | ||||||    
T  2291050 attcactgtgacctacgtgcagtaatttgactataactctagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttatatcta 2290951  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  2290950 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 2290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 18334462 - 18334299
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  18334462 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 18334363  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  18334362 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 18334299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 24422839 - 24423002
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  24422839 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 24422938  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  24422939 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 24423002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 31630237 - 31630103
Alignment:
Q  12 ttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatta 111  Q
    ||||||||||||| ||||||||||| | ||||  ||| || |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |||||    
T  31630237 ttgtgctgaaatt-cataaaaattcgctgtgacatacatgtagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgacatta 31630139  T
Q  112 gaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||  || ||||||||||||| ||||    
T  31630138 gaaagctaacatccataactacaactttcgtgttta 31630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 33862086 - 33862249
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  33862086 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 33862185  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  33862186 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 33862249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 33864570 - 33864733
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  33864570 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 33864669  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  33864670 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 33864733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 22593691 - 22593609
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaa 135  Q
    |||||||||| ||||||||||  | ||||| | ||||||| || |||  ||||||||||||||||||||||||| | ||||||    
T  22593691 agtaatttgatcataactcaagttataaaaatcatttggaagtcaaactaaatccattagaaagctaacatcttaacctacaa 22593609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 25175112 - 25175198
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||||||| | |||| ||||| |||||||| | |||||||||| ||| |||  |||||||||||||||||   ||||||||||||||    
T  25175112 agtaatttaatcatatctcaatatctaaaaatcatttggacgtcaaaccaatgccattagaaagctaacaaaattatctacaacttt 25175198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 266 - 202
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| || ||||||||||  ||| ||||||| |||| ||||||||||||||||    
T  266 aaagttgtgctgaaatt-cacaaaaattcactatgacctacgtgcagtactttgaccataactcaa 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 19609582 - 19609667
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| |||| |||||  ||||||| | |||||||||| ||| |||| ||||||||||||||| |   |||||||||||||||    
T  19609582 taatttgatcatatctcaagttctaaaaattatttggacgtcaaaccaaagccattagaaagctaataaaattatctacaactttc 19609667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 23415239 - 23415420
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| ||||| |||||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||    
T  23415239 tgctgaattttcataagatttcacagtgacctacgtgcagtaacttgaccataactcaagttctataaattgttttgacgtcagaccaatggcattagaa 23415338  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    | ||||||||  || ||||||||||||| |||| | ||| | | | ||||| ||  |||| ||||| ||| |||||||||||    
T  23415339 aactaacatccatacctacaactttcgtgtttacacctaagacaaattctgtaccaatcaataccagttttcatttcaaatt 23415420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 25688964 - 25689024
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataac 69  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||||| ||||||||||    
T  25688964 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatatgaccataac 25689024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 26924497 - 26924396
Alignment:
Q  46 tacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgtttt 145  Q
    |||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || ||||||||||||| ||    
T  26924497 tacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtt 26924398  T
Q  146 ta 147  Q
    ||    
T  26924397 ta 26924396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 1598349 - 1598512
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| || ||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||    
T  1598349 attcactgtgacctacgtgcagtaatttgactatgactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccataccta 1598448  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  1598449 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 1598512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 16826477 - 16826390
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   || ||||||||||||    
T  16826477 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattgtctacaactttc 16826390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 25535720 - 25535863
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgtttttatatct 152  Q
    |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || ||||||||||||| |||| | ||    
T  25535720 agtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcgtgtttacacct 25535819  T
Q  153 atggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    | | ||| ||||  ||  |||| ||||| ||| |||||||||||    
T  25535820 aagaccaattctctaccaatcaataccagttttcatttcaaatt 25535863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 27654706 - 27654619
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||  |||||||||||||||||   |||||||||||||||    
T  27654706 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaatgccattagaaagctaacaaaattatctacaactttc 27654619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 29665374 - 29665461
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | ||||||||  | ||||||| | |||||||||| ||| |||| ||| ||||||||||||||  || ||||||||||||    
T  29665374 agtaatttaatcataactctcattctaaaaatcatttggacgtcaaaccaaagccaatagaaagctaacataattgtctacaactttc 29665461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 27556997 - 27557055
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||| |||||||| | |||||  ||| ||||||| |||||||||||||||||||||    
T  27556997 tgctgaattttcataagatttcactatgacctacgtgcagtaatttgaccataactcaa 27557055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 1555527 - 1555596
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||    
T  1555527 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaaca 1555596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 10487923 - 10488058
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  10487923 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 10488021  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  10488022 cgccattagaaagctaacaaaattatctaaaactttc 10488058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 16377405 - 16377270
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  16377405 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 16377307  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  16377306 cgccattagaaagctaacaaaattatctaaaactttc 16377270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 16384729 - 16384594
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  16384729 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 16384631  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  16384630 cgccattagaaagctaacaaaattatctaaaactttc 16384594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 19847837 - 19847797
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  19847837 attcactgtgacctacgtgcagtaatttgaccataactcaa 19847797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 19984228 - 19984160
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| ||||  |||||||||||||||    
T  19984228 agtaatttgatcataactcaagttctaaaaatcatttggaggtcaaaccaaagtcattagaaagctaac 19984160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 367 - 508
Target Start/End: Original strand, 11310718 - 11310859
Alignment:
Q  367 aaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattacccactaattaggagcat 466  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||||||||| || ||| |     
T  11310718 aaaaccacttattatgaatcaaaagcatgaatatgaacatgttaattcaccaattcaacaaaaattagtatacacataattacccactaactatgagtac 11310817  T
Q  467 gaatttcaccaaacaaaatcatcaatttatcaattcaacaat 508  Q
    ||||||| | ||||||||||||||||| ||||||||||||||    
T  11310818 gaatttctcaaaacaaaatcatcaattaatcaattcaacaat 11310859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 17985281 - 17985147
Alignment:
Q  6 aaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaa-attaatttggacgttaaatcaaa 104  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||| |||||||||  |||||| || | ||||||  | ||| |||     
T  17985281 aaaaagttgtgctgaaatttcataaaaattcactatgacctacgtgtagtaatttgactataactcaagttctaaatatcattttgga-atcaaaccaac 17985183  T
Q  105 tccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||||  ||||||| ||| |||||||||||    
T  17985182 tccattagaaatttaacatccttacctacaactttc 17985147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 38897910 - 38897724
Alignment:
Q  27 ataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctt 126  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| ||| |||   ||||||||||||||||||      
T  38897910 ataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatctttttgacgtcaaaccaacggcattagaaagctaacatcca 38897811  T
Q  127 tatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
    || ||||||||||||  |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||||||| || ||||||||||    
T  38897810 tacctacaactttcgagtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatttggg-gcagagatgaaaa 38897724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 16214146 - 16214350
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||| ||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  16214146 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatatgaccataactcaagttctataaatctttttgacgtcataccaacggc 16214244  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||| || || |||| | ||| | ||| ||||| ||  |||| |||||| || ||||||||||| ||| || |||    
T  16214245 attagaaagctaacatccatacctacaacctttgtgtttacacctaagaccaattctggacctatcaataccaaatttcatttcaaattcggg-gcagag 16214343  T
Q  208 atgaaaa 214  Q
    |||||||    
T  16214344 atgaaaa 16214350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 45847355 - 45847291
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  45847355 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 45847291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 15376414 - 15376351
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  15376414 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 15376351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 16410520 - 16410583
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  16410520 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 16410583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18628027 - 18628090
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  18628027 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 18628090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 20384824 - 20384761
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  20384824 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 20384761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 26355682 - 26355619
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  26355682 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 26355619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 26358134 - 26358071
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  26358134 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 26358071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 27217322 - 27217385
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  27217322 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgaccataactca 27217385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8940745 - 8940875
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||| ||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  8940745 aaagttgtgcttaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 8940843  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||  || ||||||||||    
T  8940844 attagaaagctaacatccatacctacaacttt 8940875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 11303541 - 11303703
Alignment:
Q  34 ttcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctac 133  Q
    ||||| |||| ||||||| |||||||||||||||||||||| |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||    
T  11303541 ttcactgtgacctacgtgcagtaatttgaccataactcaaattctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctac 11303640  T
Q  134 aactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||| ||||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  11303641 aactttcgtgtttacatctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 11303703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 14269464 - 14269400
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||    
T  14269464 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgacaataactcaa 14269400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 25927017 - 25926836
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||    
T  25927017 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttgaccataactcaagttctataactctttttgacgtcagaccaatggcattagaa 25926918  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||| |||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  25926917 agctaatatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 25926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 13869809 - 13869872
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  13869809 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactca 13869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 14269657 - 14269470
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||||||  ||| || |||| | ||||||||  |||||||||  |||| || |  ||| ||||| | | ||||  |    
T  14269657 aaagttgtgctgaaatt-cataaaaattcactctgacctgcgtgcaataatttgatgataactcaagttctataaatttttttgacgtcataccaaaggc 14269559  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14269558 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14269470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18640733 - 18640796
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  18640733 aaagttgtgctgaaatt-cttaaaaattcactgtgacctacgtgcagtaatttgaccataactca 18640796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 15081542 - 15081404
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||| |  |||| ||||||| |||||||| ||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  15081542 aaagttgtgctgaaatt-cataaaaattaattgtgacctacgtgcagtaatttaaccataactcaagttctataaatcgttttgacgtcagaccaacggc 15081444  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  15081443 attagaaagctaacatccatacctacaactttcgtgttta 15081404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 27217153 - 27217316
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  |||||||||||||||||||||| |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  27217153 attcactgtgacctacgttcagtaatttgaccataactcaaattctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 27217252  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  27217253 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 27217316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 456783 - 456863
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||| ||||||| || | |||||| ||||    
T  456783 aaagttgtgctgaaatt-cataaaaattcaatgtgacctacgtgcagtaatttgaccttaactcataaaccaaaattcattt 456863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 11310219 - 11310327
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatt 110  Q
    |||||||||||||| |||||| ||||||  ||| ||||||| |||||||||||||||||||||  | || |||| |||| ||||| ||| |||   ||||    
T  11310219 gttgtgctgaaatt-cataaatattcactctgacctacgtgcagtaatttgaccataactcaagttatataattcatttagacgtcaaaccaatggcatt 11310317  T
Q  111 agaaagctaa 120  Q
    ||||||||||    
T  11310318 agaaagctaa 11310327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 16232982 - 16233062
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  16232982 aaagttgtgctgaaatt-cataaaaattcacggtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 16233062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 21189296 - 21189232
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||| |||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  21189296 aaagttgtgcggaaatt-cataaaaattcactctgacctacgtgcagtaatttgaccataactcaa 21189232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 1937896 - 1937828
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||| ||| ||||||||| |||||||||| ||| |||| ||||||||||| ||||    
T  1937896 agtaatttgatcataactaaaattctaaaattcatttggacgtcaaaccaaagccattagaaagataac 1937828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 14156969 - 14156905
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    |||||||| |||||| | ||||||||||||| |||| ||||||| |||||||||| |||||||||    
T  14156969 aaagttgtactgaaagtccataaaaattcactgtgacctacgtgcagtaatttgaacataactca 14156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 125965 - 126052
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| |||||||||||||||||   ||||||| |||||||    
T  125965 agtaatttgatcataactcaagttctaaaactcatttggaagtcaaaccaaagccattagaaagctaacacaattatctaaaactttc 126052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 11286976 - 11287063
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| |  ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  11286976 agtaatttgatcataactcaagttctaaaaatcatttggaagacaaaccaaagccattagaaagctaacataattatctaaaactttc 11287063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 15376583 - 15376420
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  15376583 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 15376484  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  15376483 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 15376420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 16410351 - 16410514
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  16410351 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 16410450  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  16410451 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 16410514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 20384993 - 20384830
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  20384993 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 20384894  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  20384893 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 20384830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 1857116 - 1857058
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||||||||||||||||    
T  1857116 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttgaccataactcaa 1857058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 10501288 - 10501223
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||| |||||| | |||||||||||||  ||| || |||| |||||||||||||||||||||    
T  10501288 aaagttgtactgaaagtccataaaaattcactatgaccttcgtgcagtaatttgaccataactcaa 10501223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 11393000 - 11392920
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    |||||| |||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  11393000 aaagttatgctgaaatt-cataaaaattcacggtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 11392920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 14948992 - 14948829
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| ||||||| |  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  14948992 attcactgtgacctacgtgcagtaatttgactataactctagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 14948893  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14948892 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14948829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 16232813 - 16232976
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  ||||||||||| |||||||||| |||| || |  ||| ||  | ||| |||   ||||||||||||||||| | || |||    
T  16232813 attcactgtgacctacgttcagtaatttgacaataactcaaattctataaatccttttgaattcaaaccaacggcattagaaagctaacatttataccta 16232912  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  16232913 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 16232976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 24702521 - 24702684
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  24702521 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 24702620  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||| ||||| |||| | ||| | ||| ||||| ||  | || ||||| ||| |||||||||||    
T  24702621 caaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagttttcatttcaaatt 24702684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 24704968 - 24705131
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  24704968 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 24705067  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||| ||||| |||| | ||| | ||| ||||| ||  | || ||||| ||| |||||||||||    
T  24705068 caaccttcgtgtttacacctaagaccaattctgtaccaaccaataccagttttcatttcaaatt 24705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 13918291 - 13918233
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||| |||||||| | |||||  ||| ||||||| |||||||||||||||||||||    
T  13918291 tgctgaattttcataagatttcactatgacctacgtgcagtaatttgaccataactcaa 13918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 16108545 - 16108395
Alignment:
Q  46 tacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgtttt 145  Q
    |||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||| ||||||||  || ||||||||||||| ||    
T  16108545 tacgtgtagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacagcattagaaaactaacatccatacctacaactttcgtgtt 16108446  T
Q  146 tatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    || | ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  16108445 tacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 16108395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 16213977 - 16214083
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||| |||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  16213977 attcactgtgacctacgtgcagtcatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatccataccta 16214076  T
Q  133 caacttt 139  Q
    |||||||    
T  16214077 caacttt 16214083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 23664821 - 23664659
Alignment:
Q  34 ttcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctac 133  Q
    ||||| |||| |||| || | |||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||    
T  23664821 ttcactgtgacctacatgcaataatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctac 23664722  T
Q  134 aactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  23664721 aactttcgtgtttacacctaagaccaattctgtaccaatcaataccatttttcatttcaaatt 23664659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 8940572 - 8940681
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   |||||||||||||||||   || |||    
T  8940572 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacattcataccta 8940671  T
Q  133 caactttcgt 142  Q
    ||||||||||    
T  8940672 caactttcgt 8940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 15760848 - 15760779
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||    
T  15760848 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaaca 15760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 7821965 - 7822100
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  7821965 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 7822063  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  7822064 cgccattagaaagctaacaaaattatctaaaactttc 7822100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 7829276 - 7829411
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  7829276 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 7829374  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  7829375 cgccattagaaagctaacaaaattatctaaaactttc 7829411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 10001071 - 10001007
Alignment:
Q  76 tctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    ||||||| | |||||||||| ||| ||||  ||||||||||||||||   |||||||||||||||    
T  10001071 tctaaaaatcatttggacgtcaaaccaaagtcattagaaagctaacaaaattatctacaactttc 10001007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 14269751 - 14269663
Alignment:
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14269751 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14269663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 27102669 - 27102534
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  27102669 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 27102571  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  27102570 cgccattagaaagctaacaaaattatctaaaactttc 27102534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 27110017 - 27109882
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  27110017 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 27109919  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  27109918 cgccattagaaagctaacaaaattatctaaaactttc 27109882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 27175657 - 27175792
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  27175657 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 27175755  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  27175756 cgccattagaaagctaacaaaattatctaaaactttc 27175792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 32125858 - 32125946
Alignment:
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  32125858 attagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 32125946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 38784761 - 38784626
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  38784761 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 38784663  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  38784662 cgccattagaaagctaacaaaattatctaaaactttc 38784626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 350 - 493
Target Start/End: Complemental strand, 163832 - 163691
Alignment:
Q  350 ttaagtaaaaatcaccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattac 449  Q
    ||||| ||||||| |||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| | |||| ||||||||||    
T  163832 ttaagcaaaaatc-ccaaaaaccacttattatgaatcaaaagcatgaatatgaatatgttaattcaccaattcaac-aaaattagtatacacataattac 163735  T
Q  450 ccactaattaggagcatgaatttcaccaaacaaaatcatcaatt 493  Q
    |||||||||||||| | ||||||||| |||||||||||||||||    
T  163734 ccactaattaggagtacgaatttcacaaaacaaaatcatcaatt 163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 350 - 493
Target Start/End: Complemental strand, 160562 - 160421
Alignment:
Q  350 ttaagtaaaaatcaccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattac 449  Q
    ||||| ||||||| |||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||    
T  160562 ttaagcaaaaatc-ccaaaaaccaattattatgaatcaaaagcatgaatatgaacatgttaattcaccaattcaac-aaaattagtatacacataattac 160465  T
Q  450 ccactaattaggagcatgaatttcaccaaacaaaatcatcaatt 493  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||    
T  160464 ccactacttaggagtacgaatttcacaaaacaaaatcatcaatt 160421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 365 - 501
Target Start/End: Original strand, 78784 - 78919
Alignment:
Q  365 caaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattacccactaattaggagc 464  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||| | |||| ||||||||| |||||||||||||||    
T  78784 caaaaaccacttattatgaaccaaaagaatgaatatgaacatgttaattcatcaattcaacaaaaattagtatacacataattatccactaattaggagc 78883  T
Q  465 atgaatttcaccaaacaaaatcatcaatttatcaatt 501  Q
    | |||||||||| ||||||||||||||| || |||||    
T  78884 acgaatttcacc-aacaaaatcatcaatataacaatt 78919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 113280 - 113493
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||||||||||||||| |||||| || ||  ||| ||||||  |||||||||||||||||||||  ||||||| | |||| |  || ||| |||    
T  113280 agaaaaagttgtgctgaaattttataaaactttactatgacctacgtttagtaatttgaccataactcaagttctaaaactcattttggagtcaaaccaa 113379  T
Q  104 atccattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgc 203  Q
       |||||||||  |||||||  || ||||||||| | | |||| ||| | |||||  || |||| ||||| ||||| |||  |||||||||| ||| |     
T  113380 cgtcattagaaatgtaacatccatacctacaacttccatgtttacatcaaaggccaaatccgcaccgatcaataccagtttttatttcaaattcgggggt 113479  T
Q  204 cgagatgaaaaagt 217  Q
     |||||||||||||    
T  113480 agagatgaaaaagt 113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 8e-29; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 350 - 491
Target Start/End: Complemental strand, 10812182 - 10812042
Alignment:
Q  350 ttaagtaaaaatcaccaaaaacaactgattatgaaccaaaagcatgaatatgaacatgttaattcaccaattcatcgaaaatcaatatatacataattac 449  Q
    ||||| ||||||| || ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||    
T  10812182 ttaagcaaaaatc-cctaaaaccacttattatgaatcaaaagcatgaatatgaacatgttaattcaccaattcaacaaaaattagtatacacataattac 10812084  T
Q  450 ccactaattaggagcatgaatttcaccaaacaaaatcatcaa 491  Q
    ||||||| || ||| | | ||||| | |||||||||||||||    
T  10812083 ccactaactatgagtacggatttctcaaaacaaaatcatcaa 10812042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 29298703 - 29298907
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  | || || |  ||| ||||| | | |||   |    
T  29298703 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttttataaatcgttttgacgtcagaacaacggc 29298801  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||| || ||||| |||    
T  29298802 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaa-ttcggtgcagag 29298900  T
Q  208 atgaaaa 214  Q
    |||||||    
T  29298901 atgaaaa 29298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 22122715 - 22122585
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   |    
T  22122715 aaagttgtgctgaaatt-cataaaaattcactgtgatctatgtgcagtaatttgaccataactcaagttctacaaatcgttttgaagtaaaaccaacggc 22122617  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||  || ||||||||||    
T  22122616 attagaaagctaacatccatacctacaacttt 22122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 16401382 - 16401447
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  16401382 aaaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 16401447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 31612827 - 31612891
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  31612827 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 31612891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 13989327 - 13989390
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  13989327 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 13989390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 21474787 - 21474707
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | |||||| ||||    
T  21474787 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccttaactcataaaccaaaattcattt 21474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 31613020 - 31613084
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  31613020 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaa 31613084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 10812706 - 10812642
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||| |||||||| |||| ||||||| ||||||||||||||| |||||    
T  10812706 aaagttgtgctgaaatt-catagaaattcactgtgacctacgtgcagtaatttgaccatagctcaa 10812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 16274954 - 16274818
Alignment:
Q  10 agttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccat 109  Q
    ||||||||| ||||| |||||| ||||||  ||| ||||||| |||||||||||||||||||||  |||| || || ||| ||||| | | |||    ||    
T  16274954 agttgtgctaaaatt-cataaacattcactatgacctacgtgcagtaatttgaccataactcaagttctataaatagttttgacgtcagaccaatgatat 16274856  T
Q  110 tagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||  || ||||||||||||| ||||    
T  16274855 tagaaagctaacatccatacctacaactttcgtgttta 16274818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 22050706 - 22050526
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||| ||| | ||    ||||||||||||||||||  || |||    
T  22050706 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacattagaccattgacattagaaagctaacatccataccta 22050607  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||||||| || ||||||||||    
T  22050606 caactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatttggg-gcagagatgaaaa 22050526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 27161287 - 27161223
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || |||||||||||||||| ||||    
T  27161287 aaagttgtgctgaaatt-cataaaaattcactgtgacctacatgcagtaatttgaccataattcaa 27161223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 29777202 - 29777266
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||  |||||||||||||||||||||    
T  29777202 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgttcagtaatttgaccataactcaa 29777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 542
Target Start/End: Original strand, 13515896 - 13515966
Alignment:
Q  471 ttcaccaaacaaaatcatcaatttatcaattcaacaattaatcataagctaaaacaagaagaaaagtgatta 542  Q
    ||||||||||||||||||||||| |||||||||||| ||||   ||||||| | ||| ||||||||||||||    
T  13515896 ttcaccaaacaaaatcatcaattcatcaattcaacatttaaatgtaagctagatcaa-aagaaaagtgatta 13515966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 13989158 - 13989321
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  13989158 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 13989257  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  13989258 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 13989321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 21858592 - 21858679
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| || |||||||||||||||   |||||| |||||||    
T  21858592 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccgttagaaagctaacataactatctaaaactttc 21858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 147
Target Start/End: Complemental strand, 27161449 - 27161342
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || ||||||||||    
T  27161449 gtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacgacattagaaagctaacatccatacctacaacttt 27161350  T
Q  140 cgttttta 147  Q
    ||| ||||    
T  27161349 cgtgttta 27161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 9044867 - 9044694
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||||| | |||   ||||||||| |||||||   || ||||||||||    
T  9044867 gtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgttagaccaacggcattagaaaactaacatacatacctacaacttt 9044768  T
Q  140 cgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
    ||| |||| | ||| | | | ||||| || ||||| ||||| |||  |||||||||||||| || ||||||||||    
T  9044767 cgtgtttacacctaagactaattctgtaccgatcaataccagtttttatttcaaatttggg-gcagagatgaaaa 9044694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 44035928 - 44035860
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||||||  | ||||| | |||||||||| ||| |||| ||||||||||||||||    
T  44035928 agtaatttgatcataactcaagttataaaaatcatttggacgtcaaaccaaagccattagaaagctaac 44035860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 21841071 - 21841222
Alignment:
Q  45 ctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttt 144  Q
    |||| |||||||||||||| |||||||||  |||| || | |||| || || ||| |||   |||||||||||||||||   || ||||||||||||| |    
T  21841071 ctacatgaagtaatttgactataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacattcatacctacaactttcgtgt 21841170  T
Q  145 ttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  21841171 ttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 21841222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 21923161 - 21922998
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| ||||||| |  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  21923161 attcactgtgacctacgtgcagtaatttgactataactctagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 21923062  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  21923061 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 21922998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 29535344 - 29535507
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   || |||||||||||||||  ||  ||    
T  29535344 attcactgtgacctacgtgtagtaatttgaccataactcaagttctataaattcttttgaagtcaaaccaacgacactagaaagctaacatccatacata 29535443  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||||| ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  29535444 caactttcgtgtttatacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 29535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 542
Target Start/End: Original strand, 35568981 - 35569028
Alignment:
Q  495 atcaattcaacaattaatcataagctaaaacaagaagaaaagtgatta 542  Q
    ||||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  35568981 atcaattcatcaattaattataagctagaacaagatgaaaagtgatta 35569028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 43543269 - 43543374
Alignment:
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| ||||||||||| ||| || |||    
T  43543269 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggg-gcagag 43543367  T
Q  208 atgaaaa 214  Q
    |||||||    
T  43543368 atgaaaa 43543374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 21180849 - 21180724
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    |||||||||||||||||| |||||   || || | || |||| ||| | |||| ||||||| | |||||| ||||  | || ||| |||||||||| |||    
T  21180849 tgctgaaatttcataaaatttcactaagacctccttggagtattttcatcatatctcaaaaaccaaaattcattttcaagtcaaaccaaatccattggaa 21180750  T
Q  115 agctaacatctttatctacaactttc 140  Q
    ||||||||   |||||||||||||||    
T  21180749 agctaacaaaattatctacaactttc 21180724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 29777033 - 29777142
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||  |||   ||||||||||||||||||  || |||    
T  29777033 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaacccaacgacattagaaagctaacatccataccta 29777132  T
Q  133 caactttcgt 142  Q
    ||||||||||    
T  29777133 caactttcgt 29777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 13227156 - 13227196
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  13227156 attcactgtgacctacgtgtagtaatttgaccataactcaa 13227196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 16275126 - 16275086
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  16275126 attcactgtgacctacgtgcagtaatttgaccataactcaa 16275086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 17003861 - 17003996
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  17003861 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 17003959  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  17003960 cgccattagaaagctaacaaaattatctaaaactttc 17003996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 6913 - 7096
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| ||||| | | |||   |    
T  6913 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgacgtcataccaacggc 7011  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttca 192  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| || |||||| |||||||    
T  7012 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatagcaattttcatttca 7096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 6756 - 6907
Alignment:
Q  45 ctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttt 144  Q
    ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||||||||||| |    
T  6756 ctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgt 6855  T
Q  145 ttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  6856 ttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 6907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 37092 - 36946
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  37092 aaagttgtgctgaaatt-cataaaaattcactatgatctacgtgcagtaatttgaccataactcaagttctataaatctttttgacgtcagaccaacggc 36994  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatg 155  Q
    |||||||||||||||||  || ||||||||||||| |||| |||||||    
T  36993 attagaaagctaacatccatacctacaactttcgtgtttacatctatg 36946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 36899 - 36761
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  36899 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatctttttgacgtcagaccaacaac 36801  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||| |||||||  || ||||||||||||| ||||    
T  36800 attagaaagttaacatccatacctacaactttcgtgttta 36761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21154708 - 21154570
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||| |||| || |  ||| ||||| | | |||   |    
T  21154708 aaagttgtgctgaaatt-cataaaaattcactgtgatctacgtgcagtaatttgaccgtaactcaaattctataaatcgttttgacgtcagaccaacggc 21154610  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  21154609 attagaaagctaacatccatacctacaactttcgtgttta 21154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 24529247 - 24529109
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||| ||||||||||||||  |||| || | |||| ||||| | | |||   |    
T  24529247 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatatgaccataactcaagttctataaatcattttgacgtcataccaacggc 24529149  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  24529148 attagaaagctaacatccatacctacaactttcgtgttta 24529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 22105927 - 22106131
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| ||| | | | |||   |    
T  22105927 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgaccataactcaagttctataaatcattttgacatcagaccaacggc 22106025  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || |||||||||| || |||| | ||| | ||| || || ||  |||| ||||| ||| ||||||||||| ||| || |||    
T  22106026 attagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggg-gcagag 22106124  T
Q  208 atgaaaa 214  Q
    |||||||    
T  22106125 atgaaaa 22106131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 23706727 - 23706539
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatc 106  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| ||||| |||||||||||||||  |||| || |  ||| ||| |  || |||  |    
T  23706727 aaaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaacttgaccataactcaagttctataaattgttttgacatagaaccaacac 23706629  T
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || |||||||||||    
T  23706628 cattagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatt 23706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 6726509 - 6726647
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  6726509 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 6726607  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  6726608 attagaaagctaacatccatacctacaactttcgtgttta 6726647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 24918602 - 24918740
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| ||||| | | |||        
T  24918602 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgacgtcagaccaacggt 24918700  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||| |||||||  || ||||||||||||| ||||    
T  24918701 attagaaagataacatccatacctacaactttcgtgttta 24918740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 41523580 - 41523442
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  41523580 aaagttgtgctgaaatt-cataaaaatttactgtgacctacgtgcagtaatttgaccataactcaagttctataaatctttttgacgtcagaccaacgac 41523482  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  41523481 attagaaagctaacatccatacctacaactttcgtgttta 41523442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 24681906 - 24681970
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  24681906 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 24681970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 41523773 - 41523709
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  41523773 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 41523709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18809404 - 18809467
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  18809404 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 18809467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 23131323 - 23131386
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  23131323 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 23131386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 23133790 - 23133853
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  23133790 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgaccataactca 23133853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 23711714 - 23711651
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  23711714 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 23711651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 32039199 - 32039136
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  32039199 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 32039136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 34402223 - 34402160
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  34402223 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 34402160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 22105758 - 22105921
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  22105758 attcactgtgacctacgttcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatccataccta 22105857  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||||||  |||| ||||| ||| |||||||||||    
T  22105858 caactttcgtgtttacacctaagaccaattctgcaccaatcaataccagttttcatttcaaatt 22105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 571859 - 571939
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | |||||| ||||    
T  571859 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccttaactcataaaccaaaattcattt 571939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 24642449 - 24642385
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  24642449 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagttatttgaccataactcaa 24642385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 26505843 - 26505903
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    |||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  26505843 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 26505903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 26508321 - 26508381
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    |||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  26508321 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 26508381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 39682775 - 39682855
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | |||||| ||||    
T  39682775 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccttaactcataaaccaaaattcattt 39682855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 24671487 - 24671602
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| | ||||||||||  |||| ||||||| |||||||||||||||||||||  |||| || || ||| || || |||| ||   |    
T  24671487 aaagttgtgctgaaatt-cttaaaaattcattgtgacctacgtgcagtaatttgaccataactcaagttctataaatatttttgatgtcaaataaatggc 24671585  T
Q  108 attagaaagctaacatc 124  Q
    |||||||||||||||||    
T  24671586 attagaaagctaacatc 24671602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 28577560 - 28577623
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  28577560 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactca 28577623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 24368288 - 24368426
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||| |||||||||||||||||| ||  |||| || |  ||| ||| | | | |||   |    
T  24368288 aaagttgtgttgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataacttaagttctataaatcgttttgacatcagaccaacggc 24368386  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  24368387 attagaaagctaacatccatacctacaactttcgtgttta 24368426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 39682606 - 39682769
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  |||||||||||||||||||||| |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  39682606 attcactgtgacctacgttcagtaatttgaccataactcaaattctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 39682705  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  39682706 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 39682769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 571690 - 571804
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  |||||||||||||||||||||| |||| || |  ||| ||||| ||| |||   ||||||||||||||||| | || |||    
T  571690 attcactgtgacctacgttcagtaatttgaccataactcaaattctataaatccttttgacgtcaaaccaacgacattagaaagctaacatttataccta 571789  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  571790 caactttcgtgttta 571804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 20261513 - 20261675
Alignment:
Q  34 ttcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctac 133  Q
    ||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||    
T  20261513 ttcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctac 20261612  T
Q  134 aactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  20261613 aactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 20261675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 45027605 - 45027544
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataact 70  Q
    ||||||||||||||||| |||||||| |||| |||| ||||||| ||||||||||||||||||    
T  45027605 aaagttgtgctgaaatt-cataaaaaatcactgtgacctacgtgtagtaatttgaccataact 45027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 23709040 - 23708980
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataac 69  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||||||||    
T  23709040 aaagttgtgctgaaatt-cataaaaattcactgtgacctaagtgcagtaatttgaccataac 23708980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 23709233 - 23709169
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| ||||||| |||||||||||||    
T  23709233 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaattagaccataactcaa 23709169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 24671325 - 24671481
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||||||||    
T  24671325 gtgacctacgtgcagtaatttgacaataactcaagttctataaatccttttgaagtcaaaccaacaacattagaaagctaacatccatacctacaacttt 24671424  T
Q  140 cgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||| | ||| | ||| ||||| ||  || | ||||| |||||||||||||||    
T  24671425 cgtttttacacctaagaccaattctgtaccaataaataccagtttgcatttcaaatt 24671481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 27920450 - 27920402
Alignment:
Q  24 ttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  27920450 ttcataaaaattcactgtgacctacgtgcagtaatttgaccataactca 27920402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 16900809 - 16900884
Alignment:
Q  47 acgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    ||||| |||||||||| ||||||||||  ||||||| | |||||||||| ||| ||||  ||||||||||||||||    
T  16900809 acgtgtagtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagtcattagaaagctaaca 16900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 16994200 - 16994275
Alignment:
Q  47 acgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    ||||| |||||||||| ||||||||||  ||||||| | |||||||||| ||| ||||  ||||||||||||||||    
T  16994200 acgtgtagtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagtcattagaaagctaaca 16994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 18809235 - 18809398
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  18809235 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 18809334  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  18809335 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 18809398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 19887384 - 19887297
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   |||||||||||||||    
T  19887384 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctacaactttc 19887297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 23711883 - 23711720
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  23711883 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 23711784  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  23711783 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 23711720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 23931922 - 23932060
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||| ||| |||| ||| ||||||||| |||||||||||| ||  |||| || |  ||| ||||| | | |||        
T  23931922 aaagttgtgctgaaatt-cataaaaatacactgtgacctaagtgaagtaaattgaccataactaaagttctataaatcgttttgacgtcagaccaacgaa 23932020  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  23932021 attagaaagctaacatccatacctacaactttcgtgttta 23932060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 24686707 - 24686620
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| |||||| |||  ||||||| | |||||||||| ||| |||| |||||||||||||||| |  ||||||| |||||||    
T  24686707 agtaatttgatcataacgcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacttaattatctaaaactttc 24686620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 24302325 - 24302371
Alignment:
Q  94 gttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||    
T  24302325 gttaaatcgaagccattagaaagctaacatctttatctaaaactttc 24302371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 31345471 - 31345529
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||||||||||||||||    
T  31345471 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttgaccataactcaa 31345529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 32214800 - 32214694
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  32214800 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaatggcattagaaagctaacatccataccta 32214701  T
Q  133 caacttt 139  Q
    |||||||    
T  32214700 caacttt 32214694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 24368119 - 24368282
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||| || |||||||||  |||| || | |||| || || ||| |||   |||||||||||||||||   || |||    
T  24368119 attcactgtgacctacgtgcagtaatttaactataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacattcataccta 24368218  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  24368219 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 24368282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 27261332 - 27261411
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||||||| ||||||||||  | ||||| | ||||||| || ||| |||| ||||||||||||||||||  |||||||    
T  27261332 agtaatttgatcataactcaagttataaaaattatttggaagtcaaaccaaagccattagaaagctaacataattatcta 27261411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 23706919 - 23706854
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||||||||||| |||||| |||  | ||||  |||||| |||||||||||||||||||||    
T  23706919 aaaagttgtgctgaaatt-cataaatattagctgtgacttacgtgcagtaatttgaccataactcaa 23706854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 12727711 - 12727780
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||  |||  |||||||||||||||||    
T  12727711 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaacccaaggccattagaaagctaaca 12727780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 26508223 - 26508312
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  26508223 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 26508312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 11232370 - 11232235
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  11232370 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 11232272  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  11232271 cgccattagaaagctaacaaaattatctaaaactttc 11232235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 22514217 - 22514082
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  22514217 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 22514119  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  22514118 cgccattagaaagctaacaaaattatctaaaactttc 22514082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 23707086 - 23707046
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  23707086 attcactgtgacctacgtgcagtaatttgaccataactcaa 23707046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 24918433 - 24918473
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  24918433 attcactgtgacctacgtgcagtaatttgaccataactcaa 24918473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 28776819 - 28776684
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  28776819 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 28776721  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  28776720 cgccattagaaagctaacaaaattatctaaaactttc 28776684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 18399 - 18603
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  18399 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaatgac 18497  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || |||||||||| || |||| | ||| | ||| ||||| ||  |||| ||||| ||| ||||||||||| ||| || |||    
T  18498 attagaaagctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaattcggg-gcagag 18596  T
Q  208 atgaaaa 214  Q
    |||||||    
T  18597 atgaaaa 18603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 18214904 - 18214700
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||| ||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  18214904 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatatgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 18214806  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||||||| || |||    
T  18214805 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctggacctatcaataccagatttcatttcaaatttggg-gcagag 18214707  T
Q  208 atgaaaa 214  Q
    |||||||    
T  18214706 atgaaaa 18214700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 19617767 - 19617634
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  || | || | |||| | ||||| | |||   |    
T  19617767 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttcaataaatcattttggcgttagaccaacggc 19617669  T
Q  108 attagaaagctaacatctttatctacaactttcgt 142  Q
    |||||||||||||||||  || |||||||||||||    
T  19617668 attagaaagctaacatccatacctacaactttcgt 19617634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 362835 - 362967
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||| ||| ||||||||||||| |||| ||||||| |||||||||||||||||||||| |||| || |  ||| ||||| | | |||   |    
T  362835 aaagttgtgctgatatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaaattctataaatctttttgacgtcagaccaacgac 362933  T
Q  108 attagaaagctaacatctttatctacaactttcg 141  Q
    |||||||||||||||||  || ||||||||||||    
T  362934 attagaaagctaacatccatacctacaactttcg 362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 14746212 - 14746025
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  14746212 aaagttgtgctgaaatt-cataaaaattcactatgatctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 14746114  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||||||  || ||||||||||| | |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14746113 attagaaagataacatccatacctacaactttcttgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14746025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 3515469 - 3515607
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||| ||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  3515469 aaagttgtgctaaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtgagaccaacggc 3515567  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  3515568 attagaaagctaacatccatacctacaactttcgtgttta 3515607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 14970407 - 14970277
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  14970407 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 14970309  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||  || ||||||||||    
T  14970308 attagaaagctaacatccatacctacaacttt 14970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 15495874 - 15495744
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  15495874 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaattgttttgacgtcagaccaacgac 15495776  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||  || ||||||||||    
T  15495775 attagaaagctaacatccatacctacaacttt 15495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 52313216 - 52313354
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  52313216 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 52313314  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||| ||||||||| ||||    
T  52313315 attagaaagctaacatccatacctataactttcgtgttta 52313354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 52872773 - 52872569
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||        
T  52872773 aaagttgtgctgaaatt-cataaacattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacaga 52872675  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| || || ||  |||| ||||| ||| ||||||||||| ||| || |||    
T  52872674 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattttgtaccaatcaataccagttttcatttcaaattcggg-gcagag 52872576  T
Q  208 atgaaaa 214  Q
    |||||||    
T  52872575 atgaaaa 52872569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 15118053 - 15117990
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  15118053 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 15117990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 19858040 - 19858227
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| | |||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  19858040 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcaataatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 19858138  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || |||||||||| || |||  | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  19858139 attagaaagctaacatccatacctacaacttttgtgtttgcacctaagaccaattctgtaccaatcaataccatttttcatttcaaatt 19858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 14951270 - 14951357
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| ||||||||||||||||||  |||||||||||||||    
T  14951270 agtaatttgatcataactcaagttctaaaaatcatttggaagtcaaaccaaagccattagaaagctaacataattatctacaactttc 14951357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 14746019 - 14745955
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| |||||||||||||||||||||    
T  14746019 aaagttgtgctgaaatt-cataaaaatttactgtgacctacgtgcagtaatttgaccataactcaa 14745955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 362642 - 362829
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||| ||||  ||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || | | |||   |    
T  362642 aaagttgtgctgaaatt-cataaaaaatcactatgacctacgtgcagtaatttgaccataactcaagttctataaatctttttgatgtcagaccaacggc 362740  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || |||||||||| || |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  362741 attagaaagctaacatccatacctacaactttagtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 362829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 7640887 - 7640824
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||| |||||||||||    
T  7640887 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttaaccataactca 7640824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 14185596 - 14185730
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatc 106  Q
    |||||||||||||||||| | |||| |||||| |||| ||||||  | |||||||||||||||||||  |||| || |  ||| ||||| ||| |||       
T  14185596 aaaagttgtgctgaaattcc-taaagattcactgtgacctacgttcaataatttgaccataactcaagttctataaatccttttgacgtcaaaccaacgg 14185694  T
Q  107 cattagaaagctaacatctttatctacaactttcgt 142  Q
    ||||||||||||||||||  || |||||||||||||    
T  14185695 cattagaaagctaacatccatacctacaactttcgt 14185730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 44772781 - 44772723
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataact 70  Q
    |||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||    
T  44772781 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataact 44772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 52313027 - 52313153
Alignment:
Q  12 ttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatta 111  Q
    ||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||| ||||  |||| || |  ||| ||||| | | ||||  |||||    
T  52313027 ttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataaatcaagttctataaatcgttttgacgtcataccaaaggcatta 52313125  T
Q  112 gaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||||  || ||||||||||    
T  52313126 gaaatctaacatccatacctacaacttt 52313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 15534475 - 15534637
Alignment:
Q  34 ttcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctac 133  Q
    ||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || ||||    
T  15534475 ttcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctac 15534574  T
Q  134 aactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  15534575 aactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 15534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 22725426 - 22725361
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||||||||||| |||||| |||||  |||| ||||||| |||||||||||||||||||||    
T  22725426 aaaagttgtgctgaaatt-cataaagattcagtgtgacctacgtgcagtaatttgaccataactcaa 22725361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 36038164 - 36038326
Alignment:
Q  34 ttcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctac 133  Q
    ||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||    |||||||||||||||||  || ||||    
T  36038164 ttcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggtattagaaagctaacatccatacctac 36038263  T
Q  134 aactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||| |||| | ||| ||||| ||||| ||  |||| ||||| ||| |||||||||||    
T  36038264 aactttcgtgtttacacctaaggccaattctgtaccaatcaataccagttttcatttcaaatt 36038326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 1837220 - 1837140
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  1837220 aaagttgtgctgaaatt-cataaaaattcacggtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 1837140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 55377293 - 55377208
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| ||||||||||  ||||||| | ||||||| || ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  55377293 taatttgatcataactcaagttctaaaaatcatttggaagtcaaaccaaagccattagaaagctaacataattatctaaaactttc 55377208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 25120144 - 25120076
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaac 121  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||    
T  25120144 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaac 25120076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 3515300 - 3515463
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||||||| |||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  3515300 attcactgtgacctacgtgcagtaatttgaccatagctcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatccataccta 3515399  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||| || |||| | ||| | ||| || || || ||||| ||||| ||| |||||||||||    
T  3515400 caacttttgtgtttacacctaagaccaattttgtaccgatcaataccagttttcatttcaaatt 3515463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 8374040 - 8374127
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| |||||||| ||||||||||| |||||   |||||||||||||||    
T  8374040 agtaatttaatcatatctcaagttctaaaaatcatttggacgtaaaatcaaagccattagaaagttaacaaaattatctacaactttc 8374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 10643746 - 10643833
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | ||||||| || ||| |||| ||||||||||||||||||  |||||||||||||||    
T  10643746 agtaatttaatcatatctcaagttctaaaaatcatttggatgtcaaaccaaaaccattagaaagctaacataattatctacaactttc 10643833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 14970576 - 14970413
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||| ||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||  || |||    
T  14970576 attcactgtgacctatgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatccataccta 14970477  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||  ||  |||| ||||| ||| |||||||||||    
T  14970476 caactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaatt 14970413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 15118222 - 15118059
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  15118222 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 15118123  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  15118122 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 15118059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 18247739 - 18247826
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   |||||||||||||||    
T  18247739 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctacaactttc 18247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22355169 - 22355082
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   |||||||||||||||    
T  22355169 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctacaactttc 22355082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 43281795 - 43281708
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| || | ||||||||||||||||||||| | |||||| ||||    
T  43281795 agtaatttgatcataactcaagttctaaaaatcatttggaagtaaaaccatagccattagaaagctaacatcttaacctacaattttc 43281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 17146389 - 17146303
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   ||||||||||||||    
T  17146389 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctacaacttt 17146303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 20595955 - 20595821
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||| ||||| ||||||  || |||| ||||||| ||| | ||||||||||||||||||| | ||||  | || ||| |||| |||||||||    
T  20595955 tgctgaattttcgtaaaatttcaccaagacctacttgaagtattttcatcataactcaaaatctaaaaattattttcatgtcaaaccaaagccattagaa 20595856  T
Q  115 agctaacatctttatctacaactttcgtttttata 149  Q
    |||||| |  | |||||| ||||||| | ||||||    
T  20595855 agctaatacatgtatctaaaactttcatgtttata 20595821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 5683465 - 5683396
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||| |||||||||||    
T  5683465 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaaaccattggaaagctaaca 5683396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 15287966 - 15287881
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| |||| |||||  ||||||| | |||||||||| ||| |||| ||||||||||||||| |   |||||||||||||||    
T  15287966 taatttgatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaataaaattatctacaactttc 15287881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 15295076 - 15294991
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| |||| |||||  ||||||| | |||||||||| ||| |||| ||||||||||||||| |   |||||||||||||||    
T  15295076 taatttgatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaataaaattatctacaactttc 15294991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 18168293 - 18168380
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | ||||||||||  ||||||| | |||||||| | |||||||  |||||||||||||||||   ||||||| |||||||    
T  18168293 agtaatttaatcataactcaagttctaaaaatcatttggacctcaaatcaacgccattagaaagctaacaaaattatctaaaactttc 18168380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 18239293 - 18239250
Alignment:
Q  29 aaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||    
T  18239293 aaaaattcactgtgacctacgtgaagtaatttgacaataactca 18239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 19020009 - 19020096
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   ||||||| |||||||    
T  19020009 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaaaccattagaaagctaacaaaattatctaaaactttc 19020096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 52872942 - 52872779
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||| ||||  || |||    
T  52872942 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctagcatccataccta 52872843  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  52872842 caactttcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 52872779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 19857871 - 19857985
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||| ||||  |||| || | |||| || || ||| |||   |||||||||||||||||   || |||    
T  19857871 attcactgtgacctacgtgcagtaatttgaccataaatcaagttctataaattattttgaagtcaaaccaacggcattagaaagctaacatacataccta 19857970  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  19857971 caactttcgtgttta 19857985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 5064940 - 5064883
Alignment:
Q  243 cacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaacaat 300  Q
    ||||| |||||||||||| ||||||||||| |||||||||   |||| ||||||||||    
T  5064940 cacatatatcatcttcaaattcatgaattcacatcaacaacatatactcaacaacaat 5064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 7640982 - 7640893
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  7640982 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 7640893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 14746381 - 14746341
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  14746381 attcactgtgacctacgtgcagtaatttgaccataactcaa 14746341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 18215038 - 18214998
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  18215038 attcactgtgacctacgtgcagtaatttgaccataactcaa 18214998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 19617936 - 19617896
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  19617936 attcactgtgacctacgtgcagtaatttgaccataactcaa 19617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 5e-21; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 36528427 - 36528562
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatt 110  Q
    |||||||||||||| |||||| ||||||  ||| ||||||| |||||||||||||||||||||  |||| |||| |||| ||||| ||| |||   ||||    
T  36528427 gttgtgctgaaatt-cataaatattcactatgacctacgtgcagtaatttgaccataactcaagttctataattcatttagacgtcaaaccaatggcatt 36528525  T
Q  111 agaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||||||||  || ||||||||||||| ||||    
T  36528526 agaaagctaacatccatacctacaactttcgtgttta 36528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 3264451 - 3264323
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatt 110  Q
    |||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||||||||||  |||| |||| |||| ||||| |||||||   | ||    
T  3264451 gttgtgctgaaatt-cataaatattcactgtgacctacgtgtagtaatttgaccataactcaagttctataattcatttagacgtcaaatcaacggcctt 3264353  T
Q  111 agaaagctaacatctttatctacaactttc 140  Q
    ||||| ||||||||  || |||||||||||    
T  3264352 agaaatctaacatccatacctacaactttc 3264323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 38961538 - 38961400
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| || ||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  38961538 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagcaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 38961440  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  38961439 attagaaagctaacatccatacctacaactttcgtgttta 38961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 55319182 - 55319007
Alignment:
Q  24 ttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacat 123  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||| ||||  |||| || |  ||| ||||| | | |||   |||||||||||||||||    
T  55319182 ttcataaaaattcactgtgacttacgtgcagtaatttgaccataattcaagttctataaatcgttttgacgtcagaccaacggcattagaaagctaacat 55319083  T
Q  124 ctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgg 199  Q
    |  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||||||| ||||||||||||||    
T  55319082 ccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaatttgg 55319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 55319004 - 55318800
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| | || ||||||| |||||||||||||||||||||  |||| || |  ||| || || | | |||   |    
T  55319004 aaagttgtgctgaaatt-cataaaaattcactgcgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgatgtcataccaacggc 55318906  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||| ||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||||||| || |||    
T  55318905 attagaaagctaccatccatacctacaactttcgtgtttacacctaagaccagttctggacctatcaataccagatttcatttcaaatttggg-gcagag 55318807  T
Q  208 atgaaaa 214  Q
    |||||||    
T  55318806 atgaaaa 55318800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 15465429 - 15465610
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||    
T  15465429 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaatggcattagaa 15465528  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||   || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||||||| |||||||||||    
T  15465529 agctaacattcatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaatt 15465610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 14567586 - 14567447
Alignment:
Q  7 aaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatc 106  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || |||| | |||       
T  14567586 aaaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgactataactcaagttctataaatccttttgatgttagaccaacga 14567488  T
Q  107 cattagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||   || ||||||||||||| ||||    
T  14567487 cattagaaagctaacattcatacctacaactttcgtgttta 14567447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 17463639 - 17463702
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  17463639 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 17463702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 34159787 - 34159850
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  34159787 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 34159850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 55476952 - 55477015
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  55476952 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 55477015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8499982 - 8500112
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||| ||| |||| ||||||| ||||| |||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  8499982 aaagttgtgctgaaatt-cataaaaatacactgtgacctacgtgcagtaacttgaccataactcaagttctataaatcgttttgacgtcagaccaacggc 8500080  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||| || ||||||||||    
T  8500081 attagaaagctaacatctatacctacaacttt 8500112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 13937673 - 13937535
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||| || |  ||| ||||| | | |||   |    
T  13937673 aaagttgtgctaaaatt-cataaaaattcaccgtggcctacgtgcagtaatttgaccataacacaagttctataaatcgttttgacgtcagaccaacgac 13937575  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  13937574 attagaaagctaacatccatacctacaactttcgtgttta 13937535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 30152450 - 30152537
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||| ||||||| | |||||||||| ||| |||| |||||||||||||||| |  ||||||| |||||||    
T  30152450 agtaatttgatcataactcaaattctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacttaattatctaaaactttc 30152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 53301204 - 53301066
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  53301204 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 53301106  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||||||||||   || ||||||||||||| ||||    
T  53301105 attagaaagctaacatacatacctacaactttcgtgttta 53301066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 27165714 - 27165918
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| ||||| | | |||   |    
T  27165714 aaagttgtgttgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgactataactcaagttctataaatcgttttgacgtcagaccaacggc 27165812  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    ||||||||||||||||   || ||||||||||||| |||| | ||| | ||| ||||| || ||||| ||| | |||  |||||||||| ||| || |||    
T  27165813 attagaaagctaacatacatacctacaactttcgtgtttacacctaagaccaattctgtaccgatcaatactagtttttatttcaaattcggg-gcagag 27165911  T
Q  208 atgaaaa 214  Q
    |||||||    
T  27165912 atgaaaa 27165918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 10557370 - 10557434
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||| |||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  10557370 aaagttgttctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 10557434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 15007964 - 15008028
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  15007964 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaa 15008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 16282458 - 16282394
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  16282458 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaa 16282394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 20629892 - 20629828
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  20629892 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatttgaccataactcaa 20629828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 41124401 - 41124465
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||||||||    
T  41124401 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgatcataactcaa 41124465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 6468835 - 6468772
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  6468835 aaagttgtgctgaaatt-cataaaaattcactgtgacatacgtgcagtaatttgaccataactca 6468772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15412892 - 15412955
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  15412892 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactca 15412955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 51158753 - 51158674
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||||  |||||||    
T  51158753 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacataattatcta 51158674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 541
Target Start/End: Original strand, 15080413 - 15080483
Alignment:
Q  471 ttcaccaaacaaaatcatcaatttatcaattcaacaattaatcataagctaaaacaagaagaaaagtgatt 541  Q
    ||||||||||||||||| ||||| |||||||||||| |||| | ||||||| | ||| |||||||||||||    
T  15080413 ttcaccaaacaaaatcagcaattcatcaattcaacatttaaacgtaagctagatcaaaaagaaaagtgatt 15080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 17393176 - 17393238
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataact 70  Q
    |||||||||||||||||||||||||||||||  ||| ||| ||| ||||||||||| ||||||    
T  17393176 aaagttgtgctgaaatttcataaaaattcactatgacctatgtgtagtaatttgactataact 17393238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 24513969 - 24514083
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||||||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||||||||||||  || |||    
T  24513969 attcactgtgatctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgacattagaaagctaacatccataccta 24514068  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  24514069 caactttcgtgttta 24514083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 12119523 - 12119343
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   || |||||||||||||||  || |||    
T  12119523 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcactagaaagctaacatccataccta 12119424  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
    |||||||||| |||| | ||| | ||| ||||| |||||||| ||||| |||  |||||||||| ||| || ||||||||||    
T  12119423 caactttcgtgtttacacctaagaccaattctgtactgatcaataccagtttttatttcaaattcggg-gcagagatgaaaa 12119343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 13151491 - 13151411
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  13151491 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 13151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 13153956 - 13153876
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  13153956 aaagttgtgctgaaatt-cataaaaattcactgtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 13153876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 17444464 - 17444400
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| ||||||||||||||| |||||    
T  17444464 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcagtaatttgaccatagctcaa 17444400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 26055152 - 26055027
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||| ||||||||||||  |||| || |  ||| ||||| | | ||||  ||||||||    
T  26055152 tgctgaattttcataagatttcactgtgacctacgtgcagtaattttaccataactcaagttctataaatcgttttgacgtcagaccaaaggcattagaa 26055053  T
Q  115 agctaacatctttatctacaactttc 140  Q
    ||||||||||  || |||||||||||    
T  26055052 agctaacatccatacctacaactttc 26055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 45606607 - 45606527
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||| |||||||||||| ||||||| || | |||||| ||||    
T  45606607 aaagttgtgctgaaatt-cataaaaattcacggtgacctatgtgcagtaatttgaccttaactcataaaccaaaattcattt 45606527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 46822723 - 46822787
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| ||||||||||| |||||||||    
T  46822723 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgacgataactcaa 46822787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 14528734 - 14528647
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | ||||||| ||  ||||||| | ||||||| || ||| |||||||||||||||||||||||  ||||||| |||||||    
T  14528734 agtaatttaatcataactaaagttctaaaaatcatttggaagtcaaaccaaatccattagaaagctaacataattatctaaaactttc 14528647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 15977825 - 15977988
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  15977825 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaattcttttgaagtcaaaccaacggcattagaaagctaacatttataccta 15977924  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  15977925 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 15977988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 17463470 - 17463633
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  17463470 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 17463569  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  17463570 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 17463633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 28557370 - 28557457
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||  | |||||||| | |||||||| ||||| ||||||||||||  ||||||| |||||||    
T  28557370 agtaatttgatcataactcaagttctaaatatcatttggacttcaaatcaaagccatttgaaagctaacataattatctaaaactttc 28557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 34159618 - 34159781
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  34159618 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 34159717  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  34159718 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 34159781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 45606756 - 45606613
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgtttttatatct 152  Q
    |||||||||||||||||||||| |||| || |  ||| || || ||| |||   ||||||||||||||||| | || ||||||||||||| |||| | ||    
T  45606756 agtaatttgaccataactcaaattctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttatacctacaactttcgtgtttacacct 45606657  T
Q  153 atggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    | | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  45606656 aagaccaattctgtaccaatcaataccagttttcatttcaaatt 45606613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 10379620 - 10379734
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||||||||||||  || |||    
T  10379620 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaattgttttgacgtcagaccaacgacattagaaagctaacatccataccta 10379719  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  10379720 caactttcgtgttta 10379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 46822554 - 46822668
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||    
T  46822554 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccataccta 46822653  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  46822654 caactttcgtgttta 46822668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 16934920 - 16934851
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||  |||||||||||||||||    
T  16934920 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaggccattagaaagctaaca 16934851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 10710407 - 10710348
Alignment:
Q  237 aaacttcacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaa 296  Q
    |||| ||||| |||||||| |||| |||||||||||||||||||||   |||||||||||    
T  10710407 aaacctcacaattatcatcatcaaattcatgaattctcatcaacaaaatatacccaacaa 10710348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 20630061 - 20629898
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||    
T  20630061 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccataccta 20629962  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||| || |||| | ||| | ||| ||||| ||  |||| ||| | ||| |||||||||||    
T  20629961 caacttttgtgtttacacctaagaccaattctgtaccaatcaatacaagttttcatttcaaatt 20629898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 25058298 - 25058385
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||   ||||||| |||||||    
T  25058298 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaacaaaattatctaaaactttc 25058385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 49231768 - 49231855
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||   ||||||| |||||||    
T  49231768 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaacaaaattatctaaaactttc 49231855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 54039234 - 54039167
Alignment:
Q  55 taatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||| |||| |||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||    
T  54039234 taatttgatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaaca 54039167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 16358364 - 16358235
Alignment:
Q  12 ttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatta 111  Q
    ||||||||||||| ||||||||||||  |||| ||| | | |||||||||||||||||||||  |||| || |   || ||||| | | |||   |||||    
T  16358364 ttgtgctgaaatt-cataaaaattcaatgtgacctatgcgcagtaatttgaccataactcaagttctataaatccgtttgacgtcagaccaacggcatta 16358266  T
Q  112 gaaagctaacatctttatctacaactttcgt 142  Q
    |||||||||||||  || |||||||||||||    
T  16358265 gaaagctaacatccatacctacaactttcgt 16358235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 10247424 - 10247364
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataac 69  Q
    ||||||||||||||||| |||||||||||||   || || |||| |||||||||||||||||    
T  10247424 aaagttgtgctgaaatt-cataaaaattcactaagacctccgtgcagtaatttgaccataac 10247364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 10247519 - 10247430
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  10247519 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 10247430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 16454076 - 16453987
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  16454076 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 16453987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 1468771 - 1468636
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  1468771 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 1468673  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  1468672 cgccattagaaagctaacaaaattatctaaaactttc 1468636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 8023799 - 8023875
Alignment:
Q  64 cataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||||||||| || | ||||  | || ||| | || |||||||||||||||||| |||||||| |||||||    
T  8023799 cataactcaaaatctagaaatcatttttaagtcaaacccaagccattagaaagctaacatatttatctaaaactttc 8023875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 8631319 - 8631395
Alignment:
Q  64 cataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||||| |||||| | ||||  | || ||| |||| ||||| ||||||||||||| ||||||| |||||||    
T  8631319 cataactcaaaaactaaaaatcattttcaagtcaaaccaaagccattggaaagctaacatcattatctaaaactttc 8631395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 6636 - 6431
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| ||||| | | |||   |    
T  6636 aaagttgtgctgaaatt-cattaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgacgtcagaccaacggc 6538  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||| ||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||| ||| || |||    
T  6537 attagaaaactaacatccatacctacaactttcgtgtttacagctaagaccaattctggacctatcaataccacatttcatttcaaattcggg-gcggag 6439  T
Q  208 atgaaaaa 215  Q
    ||||||||    
T  6438 atgaaaaa 6431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 6805 - 6642
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| |||||   | |||   |||| |||| ||||||||  || |||    
T  6805 attcactgtgacctacgtgtagtaatttgaccataactcaagttctataaatcgttttgacgtcggaccaacggcattggaaatctaacatccataccta 6706  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||||||| |||||||||||    
T  6705 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccaattttcatttcaaatt 6642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8201 - 8331
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| ||| |||        
T  8201 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgtagtaatttgaccataactcaagttctataaatcgttttgacgtcaaaccaagggg 8299  T
Q  108 attagaaagctaacatctttatctacaacttt 139  Q
    |||||||||||||||||  |||||||||||||    
T  8300 attagaaagctaacatccatatctacaacttt 8331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 8044 - 8195
Alignment:
Q  45 ctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttt 144  Q
    ||||||| |||||||||||||||| ||||| |||| || |  ||| || || ||| |||    |||||||||||||||||  || ||||||||||||| |    
T  8044 ctacgtgcagtaatttgaccataattcaaattctataaatccttttgaagtcaaaccaacggaattagaaagctaacatccatacctacaactttcgtgt 8143  T
Q  145 ttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||| | ||| | ||| ||||| ||| |||| ||||| ||| |||||||||||    
T  8144 ttacacctaagaccaattctgtactaatcaataccagttttcatttcaaatt 8195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 8394 - 8458
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||| | ||||||||| ||| |||| ||||||| |||||||| ||||||||||||    
T  8394 aaagttgtgctgaaaat-cataaaaatgcactgtgacctacgtgcagtaatttcaccataactcaa 8458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 27472117 - 27471979
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  27472117 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcagaccaacgac 27472019  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  27472018 attagaaagctaacatccatacctacaactttcgtgttta 27471979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 32122190 - 32122394
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||| | | | |||   |    
T  32122190 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacatcagaccaacggc 32122288  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||  ||  |||| ||||| ||| ||||||||||| ||| || |||    
T  32122289 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctataccaatcaataccagttttcatttcaaattcggg-gcagag 32122387  T
Q  208 atgaaaa 214  Q
    |||||||    
T  32122388 atgaaaa 32122394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 15202879 - 15202692
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   |    
T  15202879 aaagttgtgctgaaatt-cataaatattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaattcttttgaagtcaaaccaatagc 15202781  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| || || ||| |||||||||||    
T  15202780 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaatt 15202692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 16413016 - 16412829
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||  |||||||||||||||||||||  |||| || |  ||| ||| | | | |||        
T  16413016 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtatagtaatttgaccataactcaagttctataaatctttttgacatcagaccaacgga 16412918  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||||||| |||||||||||    
T  16412917 attagaaagctaacatccatacctacaactttcgtgtttacacctaagaccagttctgtaccaatcaataccaattttcatttcaaatt 16412829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 15071022 - 15071160
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||  |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  15071022 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgttcagtaatttgaccataactcaagttctataaatctttttgacgtcagaccaacggc 15071120  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  15071121 attagaaagctaacatccatacctacaactttcgtgttta 15071160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 19896783 - 19896921
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || |||||||||||||||||||||  |||| || |  ||| || || ||| |||   |    
T  19896783 aaagttgtgctgaaatt-cataaaaattcactgtgacctacttgcagtaatttgaccataactcaagttctataaatcgttttgaagtcaaaccaacggc 19896881  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  19896882 attagaaagctaacatccatacctacaactttcgtgttta 19896921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 1484863 - 1484926
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  1484863 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 1484926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 5852993 - 5852930
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  5852993 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 5852930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 14409145 - 14409082
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  14409145 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 14409082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 20045896 - 20045833
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  20045896 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 20045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 15320098 - 15320011
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  15320098 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacatagttatctaaaactttc 15320011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 15500467 - 15500380
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  15500467 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacatagttatctaaaactttc 15500380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 14397628 - 14397447
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||    
T  14397628 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttgaccataactcaagttctacaaatcattttgaagtcaaaccaacgacattagaa 14397529  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||   || ||||| ||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14397528 agctaacattcatacctacagctttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14397447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 14824236 - 14824316
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaattt 89  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| | |||||||||||||||||| || | |||| ||||||    
T  14824236 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcaataatttgaccataactcataaaccaaaaataattt 14824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 19896976 - 19897040
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  19896976 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaa 19897040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 20403741 - 20403805
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||||||||||    
T  20403741 aaagttgtgctgaaatt-cataaacattcactgtgacctacgtgcagtaatttgaccataactcaa 20403805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 38549705 - 38549641
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  38549705 aaagttgtgatgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 38549641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 4483741 - 4483804
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| |||| || ||||||||||||||||||||    
T  4483741 aaagttgtgctgaaatt-cataaaaattcactgtgacctacatgcagtaatttgaccataactca 4483804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 38549512 - 38549326
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||||||||||||||  |||| || |  ||| ||||| | | |||   |    
T  38549512 aaagttgtgctgaaatt-cataaaaattcactgtgc-ctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacgtcataccaacgac 38549415  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||||||||||  ||  |||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || |||||||||||    
T  38549414 attagaaagctaacatccatacatacaactttcgtgtttacacctaagaccaattctgtacctatcaataccagatttcatttcaaatt 38549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 3844609 - 3844554
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgac 63  Q
    |||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||    
T  3844609 aaagttgtgctgaaatttcataaaaattcactatgacctacgtgtagtaatttgac 3844554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 16401417 - 16401294
Alignment:
Q  24 ttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacat 123  Q
    |||||||| |||||| |||| |||||||  ||||||||||||||||||||  |||| || |  ||| ||||| ||| |||   |||||||||||||||||    
T  16401417 ttcataaacattcactgtgacctacgtgctgtaatttgaccataactcaagttctataaatctttttgacgtcaaaccaacggcattagaaagctaacat 16401318  T
Q  124 ctttatctacaactttcgttttta 147  Q
    |  || ||||||||||||| ||||    
T  16401317 ccatacctacaactttcgtgttta 16401294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 16413185 - 16413022
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||| || | |||| || || ||| |||   |||||| |||||||||||  || |||    
T  16413185 attcactgtgatctacgtgaagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagcaagctaacatccataccta 16413086  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||| |||| |||| | ||| | ||| || || ||  |||| ||||| ||| |||||||||||    
T  16413085 caactgtcgtgtttacacctaagaccaattatgtaccaatcaataccagttttcatttcaaatt 16413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 15202683 - 15202622
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||||||| ||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  15202683 gttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgaccataactcaa 15202622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 19936608 - 19936544
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||| |||||||||| ||||||||||    
T  19936608 aaagttgtgctgaaatt-cataaaaattcattgtgacctacgtgcagtaatttgagcataactcaa 19936544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 24624245 - 24624321
Alignment:
Q  64 cataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    ||||||||||||||||||| ||||||  | || ||| |||||||||||||||  |||||||||||| || |||||||    
T  24624245 cataactcaaaatctaaaaataatttttaagtcaaaccaaatccattagaaatataacatctttatataaaactttc 24624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 1484694 - 1484857
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  1484694 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 1484793  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  1484794 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 1484857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 14409314 - 14409151
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  14409314 attcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 14409215  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  14409214 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 14409151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16401240 - 16401186
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgac 63  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||    
T  16401240 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgac 16401186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22089482 - 22089395
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||| ||  | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  22089482 agtaatttgatcataactcaagttcttaatatcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 22089395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 24049072 - 24049276
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| |||||||||| |   ||| ||||||| |||||||||||||||||||||  | || || |  ||| ||||| | | |||   |    
T  24049072 aaagttgtgctgaaatt-cataaaaatttattttgacctacgtgcagtaatttgaccataactcaagttttataaatcgttttgacgtcagaccaacgac 24049170  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||||||||||||  || ||| ||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || ||||||||||| ||| || |||    
T  24049171 attagaaagctaacatccatacctataactttcgtgtttacacctaagaccaattctggacctatcaataccatatttcatttcaaattcggg-gcagag 24049269  T
Q  208 atgaaaa 214  Q
    |||||||    
T  24049270 atgaaaa 24049276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 45290503 - 45290397
Alignment:
Q  41 tgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    ||||||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||||||||||    
T  45290503 tgatctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttc 45290404  T
Q  141 gttttta 147  Q
    || ||||    
T  45290403 gtgttta 45290397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 29759429 - 29759498
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| |||||||||||||||||    
T  29759429 agtaatttgatcataactcaagttctaaaaatcatttggaagtcaaaccaaagccattagaaagctaaca 29759498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 16401625 - 16401438
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||  |||   ||||||  ||||||||||||||||||||  |||| || | |||| || || ||| |||   |    
T  16401625 aaagttgtgctgaaatt-cataaaaattcattgtggcatacgtgctgtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggc 16401527  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
     || |||||||||||||  || ||||||||||||| |||| | ||| | ||| ||  | ||  |||| ||||| |||||||||||||||    
T  16401526 gttggaaagctaacatccatacctacaactttcgtgtttacacctaagaccaattacgtaccaatcaataccagtttgcatttcaaatt 16401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 18677934 - 18677818
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   || |||||||||||||||  || |||    
T  18677934 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaattcttttgaagtcaaaccaacggcactagaaagctaacatccataccta 18677835  T
Q  133 caactttcgtttttata 149  Q
    |||||||||| ||||||    
T  18677834 caactttcgtgtttata 18677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 22146977 - 22147073
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgtttttata 149  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| |||  ||||||||||||   ||||||| ||||||| | ||||||    
T  22146977 agtaatttgatcataactcaagttctaaaaattatttggacgtcaaaccaaagccaaaagaaagctaacacaattatctaaaactttcatgtttata 22147073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 5853162 - 5852999
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| ||||||||||| ||||||| |  |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  5853162 attcactgtgacctacgtgcagtaatttgactataactctagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 5853063  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  5853062 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 5852999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 17150725 - 17150638
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | ||||||||||  ||||||| | ||||||| ||  || |||| ||||||||||||||||||  |||||| ||||||||    
T  17150725 agtaatttaatcataactcaagttctaaaaatcatttggaagtccaaccaaagccattagaaagctaacataattatctgcaactttc 17150638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22007195 - 22007108
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||   ||||||| |||||||    
T  22007195 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaacaaaattatctataactttc 22007108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 27472286 - 27472172
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||| ||||||||  || |||    
T  27472286 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatccttttgaagtcaaaccaacgacattagaaatctaacatccataccta 27472187  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  27472186 caactttcgtgttta 27472172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 32122021 - 32122135
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || |||  ||   ||||||||||||||||||  || |||    
T  32122021 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaactaacggcattagaaagctaacatccataccta 32122120  T
Q  133 caactttcgttttta 147  Q
    |||| ||||| ||||    
T  32122121 caacattcgtgttta 32122135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 4542169 - 4542080
Alignment:
Q  107 cattagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||||||||| | || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  4542169 cattagaaagctaacatttatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 4542080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 9416117 - 9416189
Alignment:
Q  227 caacttgttaaaacttcacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaacaat 300  Q
    |||||| || |||||||| |  |||||| ||||| |||||||||||||||||||||  ||||||||| ||||||    
T  9416117 caacttattcaaacttcataaatatcat-ttcaaattcatgaattctcatcaacaacacatacccaagaacaat 9416189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 13663198 - 13663129
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||    
T  13663198 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaaca 13663129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 272321 - 272186
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  272321 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 272223  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  272222 cgccattagaaagctaacaaaattatctaaaactttc 272186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 643528 - 643663
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  643528 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 643626  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  643627 cgccattagaaagctaacaaaattatctaaaactttc 643663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 829334 - 829469
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  829334 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 829432  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  829433 cgccattagaaagctaacaaaattatctaaaactttc 829469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 1326801 - 1326761
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  1326801 attcactgtgacctacgtgcagtaatttgaccataactcaa 1326761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 25658022 - 25657982
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  25658022 attcactgtgacctacgtgcagtaatttgaccataactcaa 25657982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 826 - 959
Alignment:
Q  5 gaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaa 104  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||| |||||| ||||||||||||||  |||| || |  ||| ||||| | | |||     
T  826 gaaaaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatatgaccataactcaagttctataaatcgttttgacgtcagaccaac 924  T
Q  105 tccattagaaagctaacatctttatctacaacttt 139  Q
      ||||||||||||||||||  |||||||||||||    
T  925 ggcattagaaagctaacatccatatctacaacttt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 669 - 733
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||| |||||||| |||| |||| || |||||||||||||||||||||    
T  669 aaagttgtgctgaaatt-catacaaattcactgtgacctacatgcagtaatttgaccataactcaa 733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 507 - 606
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||| || ||||||||||    
T  507 gtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatctatacctacaacttt 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 11040 - 10834
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||  ||||||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| ||||| | | |||   |    
T  11040 aaagttgtgctgaaatt-caggaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgacgtcagaccaacggc 10942  T
Q  108 attagaaagctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgag 207  Q
    |||||||| ||||||||  || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| |||||  || |||||||||||  || || |||    
T  10941 attagaaaactaacatccatacctacaactttcgtgtttacagctaagaccaattctggacctatcaataccacatttcatttcaaattccggggcggag 10842  T
Q  208 atgaaaaa 215  Q
    ||||||||    
T  10841 atgaaaaa 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 15374 - 15438
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||| |||||||||||||||||||||    
T  15374 aaagttgtgctgaaatt-cataaacattcactgtgacctacgtgcagtaatttgaccataactcaa 15438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 11209 - 11169
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  11209 attcactgtgacctacgtgtagtaatttgaccataactcaa 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 4e-18; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 40861 - 40927
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaa 75  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  40861 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaaaa 40927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 4864 - 4813
Alignment:
Q  484 atcatcaatttatcaattcaacaattaatcataagctaaaacaagaagaaaa 535  Q
    ||||| |||| |||||||||||||||||||| |||||| |||||||||||||    
T  4864 atcatgaattcatcaattcaacaattaatcacaagctagaacaagaagaaaa 4813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 37831 - 37946
Alignment:
Q  23 tttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaaca 122  Q
    ||||| ||||||||||  ||| ||| ||| |||||||||| ||||||||||  |||||||| | |||||| || ||| |||| ||||| |||||||||||    
T  37831 tttcacaaaaattcaca-tgacctatgtgtagtaatttgatcataactcaagttctaaaatca-tttggaagtcaaaccaaagccatttgaaagctaaca 37928  T
Q  123 tctttatctacaactttc 140  Q
    |  ||||||| |||||||    
T  37929 taattatctaaaactttc 37946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 40704 - 40855
Alignment:
Q  45 ctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttt 144  Q
    ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||| | |||||||||||||||| |    
T  40704 ctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttatatctacaactttcgtgt 40803  T
Q  145 ttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||| | ||| | ||| ||||| ||  |||| ||||| |||  ||||||||||    
T  40804 ttacacctaagaccaattctgtaccaatcaataccagttttaatttcaaatt 40855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 23074 - 22941
Alignment:
Q  5 gaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaa 104  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||| |||||| |||||||||||||   |||| || |  ||| ||||| | | |||     
T  23074 gaaaaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatatgaccataactcatgttctataaatcgttttgacgtcagaccaac 22976  T
Q  105 tccattagaaagctaacatctttatctacaacttt 139  Q
      ||||||||||||||||||  |||||||||||||    
T  22975 ggcattagaaagctaacatccatatctacaacttt 22941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 23231 - 23167
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||| |||||||| |||| |||| || |||||||||||||||||||||    
T  23231 aaagttgtgctgaaatt-catacaaattcactgtgacctacatgcagtaatttgaccataactcaa 23167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 23393 - 23294
Alignment:
Q  40 gtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||| || ||||||||||    
T  23393 gtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatctatacctacaacttt 23294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 5156 - 5220
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  5156 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 5220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 43201 - 43265
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  43201 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaa 43265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 1716 - 1847
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||  |||| || |  ||| || || ||| |||   |    
T  1716 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgactataactcaagttctataaatccttttgaagtcaaaccaacgac 1814  T
Q  108 attagaaagctaacatctttatctacaactttc 140  Q
    |||||||||||||||||  || |||||||||||    
T  1815 attagaaagctaacatccatacctacaactttc 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 13854 - 13985
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||  ||||||||||||||||||||||| | |||| | ||||  | || ||| | | |||    
T  13854 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgttcagtaatttgaccataactcaaaaaccaaaactcattttcaagtcaaaccgattcc 13952  T
Q  108 attagaaagctaacatctttatctacaactttc 140  Q
    | | |||||||||||   |||||||||||||||    
T  13953 actggaaagctaacacaattatctacaactttc 13985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 38283 - 38346
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  38283 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 38346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 38114 - 38277
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||  |||||||||||||||||||||| |||| || |  ||| || || ||| |||   ||||||||||||||||| | || |||    
T  38114 attcactgtgacctacgttcagtaatttgaccataactcaaattctataaatccttttgaagtcaaaccaacggcattagaaagctaacatttataccta 38213  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  38214 caactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 38277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 94872 - 94935
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactca 72  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  94872 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactca 94935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 17140 - 17076
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| | |||||||| ||||||||||    
T  17140 aaagttgtgctgaaatt-cataaaaattcactatgacctacgtgcattaatttgatcataactcaa 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 17309 - 17195
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||    || |||    
T  17309 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacaaaaataccta 17210  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  17209 caactttcgtgttta 17195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 501529 - 501664
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatt 110  Q
    |||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| ||| | | | |||   ||||    
T  501529 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatcgttttgacatcagaccaacggcatt 501627  T
Q  111 agaaagctaacatctttatctacaactttcgttttta 147  Q
    ||||||||||||||  || ||||||||||||| ||||    
T  501628 agaaagctaacatccatacctacaactttcgtgttta 501664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 501358 - 501471
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||| ||||||||||  |||| || | |||| || || ||| |||   ||||||||||||||||||| |  |||    
T  501358 attcactgtgacctacgtgcagtaatttgatcataactcaagttctataaatcattttgaagtcaaaccaacggcattagaaagctaacatctat-ccta 501456  T
Q  133 caactttcgttttta 147  Q
    |||||||||| ||||    
T  501457 caactttcgtgttta 501471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 30470 - 30557
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  30470 agtaatttgatcataactcaagttctaaaaatcatttggacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 30557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 4003 - 3939
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||| ||||||||||    
T  4003 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgatcataactcaa 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 3602 - 3553
Alignment:
Q  24 ttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||| |||| ||||||| |||| ||||||||||||||||    
T  3602 ttcataaaaattcacagtgacctacgtgcagtattttgaccataactcaa 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 3810 - 3746
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||| || |||| ||||||  |||||||||| ||||||||||    
T  3810 aaagttgtgctgaaatt-cataaaaattaactgtgacctacgttcagtaatttgagcataactcaa 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 7583 - 7519
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||||| |||||||||||||||||||||    
T  7583 aaagttgtgctgaaatt-cataaaatttcactgtgacctacgtgtagtaatttgaccataactcaa 7519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 7388 - 7327
Alignment:
Q  11 gttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||||||||||| ||||||||||||| |||| ||||||| | |||||||||||||||||||    
T  7388 gttgtgctgaaatt-cataaaaattcactgtgacctacgtgcaataatttgaccataactcaa 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 7198 - 7134
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||| |||| |||| ||| ||| |||||||||||||||||||||    
T  7198 aaagttgtgctgaaatt-cataaaaagtcactgtgacctatgtgcagtaatttgaccataactcaa 7134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 302 - 213
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggac 93  Q
    ||||||| ||| |||||| ||| |||||||||||  |||| ||||||| |||| ||||||||||| ||||||||||||| | ||||||||    
T  302 agaaaaaattgggctgaatttttataaaaattcattgtgacctacgtgtagtagtttgaccataaatcaaaatctaaaaatcatttggac 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 10253 - 10317
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||||    
T  10253 aaagttgtgctgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgacaataactcaa 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 10446 - 10584
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatcc 107  Q
    ||||||||||||||||| || |||||||||  |||| |||| || ||||||||||||||||| |||  |||| || |  ||| ||||| | | |||        
T  10446 aaagttgtgctgaaatt-cacaaaaattcattgtgacctacatgcagtaatttgaccataacgcaagttctataaatctttttgacgtcagaccaacggt 10544  T
Q  108 attagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||||||||||  || ||||||||||||| ||||    
T  10545 attagaaagctaacatccatacctacaactttcgtgttta 10584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 1375 - 1462
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| ||| |||| |||||||||||||||||   ||||||| |||||||    
T  1375 agtaatttgatcataactcaagttctaaaactcatttggacgtcaaaccaaagccattagaaagctaacaaaattatctaaaactttc 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 725 - 812
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||||| | | |||| |||||||||||||||| |  |||||||||||||||    
T  725 agtaatttgatcataactcaagttctaaaaatcatttggacgtcagaccaaagccattagaaagctaacgtaattatctacaactttc 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 110174 - 110087
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || |||||||| |||||||||||||||| |  ||||||| |||||||    
T  110174 agtaatttgatcataactcaagttctaaaaatcatttggatgtcaaatcaaagccattagaaagctaacgtaattatctaaaactttc 110087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 118675 - 118588
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || |||||||| |||||||||||||||| |  ||||||| |||||||    
T  118675 agtaatttgatcataactcaagttctaaaaatcatttggatgtcaaatcaaagccattagaaagctaacgtaattatctaaaactttc 118588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 894 - 996
Alignment:
Q  45 ctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttt 144  Q
    ||||||| |||||||||||||||||||||  |||| || |||||| || || ||| |||   ||||||||||||||||||  || ||||||||||||| |    
T  894 ctacgtgcagtaatttgaccataactcaagttctataaataattttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgt 993  T
Q  145 tta 147  Q
    |||    
T  994 tta 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 1051 - 1115
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||||||||||||||| |||||||||||||  ||| || |||| |||||||||||||||||||||    
T  1051 aaagttgtgctgaaatt-cataaaaattcactatgacctgcgtgtagtaatttgaccataactcaa 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 30481 - 30542
Alignment:
Q  8 aaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataact 70  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||    
T  30481 aaagttgtgttgaaatt-cataaaaattcactgtgacctacgtgcagtaatttgaccataact 30542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 30312 - 30352
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  30312 attcactgtgacctacgtgcagtaatttgaccataactcaa 30352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 17928 - 18109
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||| ||| |||||||||||||||||||||  |||| || | |||| ||||| | | |||    |||||||    
T  17928 tgctgaattttcataagatttcactgtgacctatgtgcagtaatttgaccataactcaagttctataaatcattttgacgtcagaccaatggtattagaa 18027  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||||  || |||||||||| || |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  18028 agctaacatccatacctacaacttttgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 18109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 31478 - 31659
Alignment:
Q  15 tgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaa 114  Q
    ||||||| |||||||| | ||||| |||| ||||||| |||||||| ||||||||||||  |||| || |  ||| ||||| | | |||   ||||||||    
T  31478 tgctgaattttcataagatttcactgtgacctacgtgcagtaatttaaccataactcaagttctataaatcgttttgacgtcagaccaatggcattagaa 31577  T
Q  115 agctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    |||||||||   || ||||||||||||| |||| | ||| | ||| ||||| ||  |||| ||||| ||| |||||||||||    
T  31578 agctaacattaatacctacaactttcgtgtttacacctaagaccaattctgtaccaatcaataccagttttcatttcaaatt 31659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33448 - 33504
Alignment:
Q  17 ctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    ||||| |||||||| | |||||||||| ||||||| |||||||||||||||||||||    
T  33448 ctgaattttcataagatttcaccgtgacctacgtgcagtaatttgaccataactcaa 33504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 868 - 955
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| |||||||||   ||||||| | ||||| |||| ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  868 agtaatttgatcataactcaggttctaaaaatcatttgcacgtcaaaccaaagccattagaaagctaacataattatctaaaactttc 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0613 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 2591 - 2528
Alignment:
Q  237 aaacttcacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaacaat 300  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||   ||| |||||||||||    
T  2591 aaacttcacatttatcatcttcaaattcataaattcccatcaacaagatatatccaacaacaat 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 1959 - 2046
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| |||||||||||| ||| |||| |||  ||| |||||||||  || ||||||||||||    
T  1959 agtaatttgatcataactcaagttctaaaaataatttggacgtcaaaccaaagccaaaagatagctaacataattgtctacaactttc 2046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 6305 - 6218
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||| || || ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  6305 agtaatttgatcataactcaagttctaaaaatcatttagaagtcaaaccaaagccattagaaagctaacataattatctataactttc 6218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 33174 - 33111
Alignment:
Q  237 aaacttcacatttatcatcttcaagttcatgaattctcatcaacaatccatacccaacaacaat 300  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||  |||||| |||||||||    
T  33174 aaacttcacaattatcatcttcaaaatcataaattctcatcaacaacacatacctaacaacaat 33111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 20009 - 19922
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||| ||||| ||||||||||||  ||||||| |||||||    
T  20009 agtaatttgatcataactcaagttctaaaaatcatttggacttcaaaccaaagccattggaaagctaacataattatctaaaactttc 19922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 12590 - 12508
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaa 135  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||  |||| ||||||||||||||||||||| | ||||||    
T  12590 agtaatttgatcataactcaagttctaaaaatcatttggaagtcaacccaaagccattagaaagctaacatcttaacctacaa 12508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 45448 - 45518
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacat 123  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| ||||||||||||||||||    
T  45448 agtaatttgatcataactcaagttctaaaaattatttggaagtaaaaccaaagccattagaaagctaacat 45518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 39965 - 40052
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| ||||||||||||| ||||  |||| || |||||||    
T  39965 agtaatttgatcataactcaagttctaaaaatcatttggaagtaaaaccaaagccattagaaagctgacataattatataaaactttc 40052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 79003 - 79090
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | ||||||| || ||| |||| | ||||||||||||||||  || |||| |||||||    
T  79003 agtaatttgatcataactcaagttctaaaaatcatttggatgtcaaaccaaagcaattagaaagctaacataattgtctaaaactttc 79090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 8290 - 8418
Alignment:
Q  12 ttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccatta 111  Q
    |||| |||||| | ||||||||||||| |||| | ||||| |||||||| ||||||||||||  |||| || |  ||| || || ||| |||   |||||    
T  8290 ttgtactgaaagtccataaaaattcactgtgaccaacgtgcagtaattttaccataactcaagttctataaatccttttgaagtcaaaccaatagcatta 8389  T
Q  112 gaaagctaacatctttatctacaactttc 140  Q
    |||||||||||||  || |||||||||||    
T  8390 gaaagctaacatccatacctacaactttc 8418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 7039 - 6952
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | |||||||| | ||| |||  |||||||||||||||||   ||||||| |||||||    
T  7039 agtaatttgatcataactcaagttctaaaaatcatttggacctcaaaccaacgccattagaaagctaacaaaattatctaaaactttc 6952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 8566 - 8653
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  ||||||| | || | || || ||| |||| ||||||||||||||||||  ||||||| |||||||    
T  8566 agtaatttgatcataactcaagttctaaaaatcatctagaagtcaaaccaaagccattagaaagctaacataattatctaaaactttc 8653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 18205 - 18292
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  | ||||| | |||||||| | ||| |||| |||||||||||||||||   ||||||| |||||||    
T  18205 agtaatttgatcataactcaagttataaaaatcatttggacctcaaaccaaagccattagaaagctaacaaaattatctaaaactttc 18292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 28469 - 28556
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||||| ||||||||||  | ||||| | |||||||||| ||| |||| |||||||||| |||| |   |||||||||||||||    
T  28469 agtaatttgatcataactcaagttataaaaatcatttggacgtcaaaccaaagccattagaaaactaaaaaaattatctacaactttc 28556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 8192 - 8105
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttc 140  Q
    |||||||| | |||| |||||  ||||||| | |||||||||| ||| |||| |||||||| |||||||||  || ||||||||||||    
T  8192 agtaatttaatcatatctcaagttctaaaaatcatttggacgtcaaaccaaagccattagatagctaacataattgtctacaactttc 8105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 39609 - 39788
Alignment:
Q  17 ctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaag 116  Q
    ||||| |||| ||| | ||||| |||| ||||||| | |||||||||||||||||||  |||| || |  ||| ||||||| | |||   ||||||||||    
T  39609 ctgaattttcttaagatttcactgtgacctacgtgtaataatttgaccataactcaagttctataaatcgttttgacgttagaccaatggcattagaaag 39708  T
Q  117 ctaacatctttatctacaactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatt 196  Q
    ||||||||  || |||||||||| || |||| | ||| | ||| ||||| ||  |||| || || ||| |||||||||||    
T  39709 ctaacatccataactacaacttttgtgtttacacctaagaccaattctgtaccaatcaatatcagttttcatttcaaatt 39788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 1365 - 1279
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaacttt 139  Q
    |||||||||| ||||||||||  ||||||| | |||||||  | ||| |||| |||||||||||||||||   ||||||| ||||||    
T  1365 agtaatttgatcataactcaagttctaaaaatcatttggaaatcaaaccaaaaccattagaaagctaacacaattatctaaaacttt 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 38505 - 38411
Alignment:
Q  53 agtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatctacaactttcgttttta 147  Q
    |||||||||| ||||||||||| |||| || | |||| || || ||| |||   ||||||||||||||||||  || ||||||||||||| ||||    
T  38505 agtaatttgaacataactcaaattctataaatcattttgaagtcaaaccaacgacattagaaagctaacatccatacctacaactttcgtgttta 38411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 393 - 213
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaaatccattagaaagctaacatctttatcta 132  Q
    |||||| |||| ||||||| |||||||||||||||||||||  |||| || |  ||| || || ||| |||   ||||||||||||||||||  || |||    
T  393 attcactgtgacctacgtgcagtaatttgaccataactcaagttctataaatctttttgaagtcaaaccaacggcattagaaagctaacatccataccta 294  T
Q  133 caactttcgtttttatatctatggccacttctgcactgatcagtaccaatttgcatttcaaatttgggtgccgagatgaaaa 214  Q
     ||||||| | |||| | ||| | ||| || || ||  |||| ||||| ||| ||||||||||| ||| || ||||||||||    
T  293 taactttcttgtttacacctaagaccatttatgtaccaatcaataccagttttcatttcaaattcggg-gcagagatgaaaa 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 28134 - 28174
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||||||||||||||| |||||||||    
T  28134 attcactgtgacctacgtgaagtaatttgactataactcaa 28174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 38327 - 38462
Alignment:
Q  4 agaaaaagttgtgctgaaatttcataaaaattcaccgtgatctacgtgaagtaatttgaccataactcaaaatctaaaattaatttggacgttaaatcaa 103  Q
    |||||||||| |||| |  ||||| ||||||||||  ||| | | ||| |||||||||| |||||||| |  ||||||| | |||||||| | ||| |||    
T  38327 agaaaaagttatgctaagttttcacaaaaattcaca-tgacccatgtgtagtaatttgatcataactcgagttctaaaaatcatttggacctgaaaccaa 38425  T
Q  104 atccattagaaagctaacatctttatctacaactttc 140  Q
      |||||||||||||||||   ||||||| |||||||    
T  38426 cgccattagaaagctaacaaaattatctaaaactttc 38462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 68254 - 68294
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  68254 attcactgtgacctacgtgtagtaatttgaccataactcaa 68294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 57774 - 57814
Alignment:
Q  33 attcaccgtgatctacgtgaagtaatttgaccataactcaa 73  Q
    |||||| |||| ||||||| |||||||||||||||||||||    
T  57774 attcactgtgacctacgtgcagtaatttgaccataactcaa 57814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University