View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21628_high_8 (Length: 393)

Name: NF21628_high_8
Description: NF21628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21628_high_8
NF21628_high_8
[»] chr3 (57 HSPs)
chr3 (7-259)||(52828111-52828363)
chr3 (264-393)||(3944899-3945028)
chr3 (264-393)||(23584836-23584965)
chr3 (264-393)||(23599659-23599788)
chr3 (264-393)||(44868011-44868140)
chr3 (265-393)||(50687661-50687789)
chr3 (259-393)||(37373964-37374098)
chr3 (264-393)||(25025178-25025307)
chr3 (268-393)||(29342349-29342474)
chr3 (268-393)||(48218599-48218724)
chr3 (257-393)||(32672163-32672299)
chr3 (268-391)||(55281843-55281966)
chr3 (268-393)||(25025717-25025842)
chr3 (268-393)||(44868571-44868696)
chr3 (268-391)||(8427698-8427821)
chr3 (258-393)||(31014877-31015012)
chr3 (264-391)||(37374824-37374946)
chr3 (264-393)||(42356237-42356369)
chr3 (280-393)||(47737626-47737739)
chr3 (265-393)||(50675078-50675206)
chr3 (264-393)||(19555274-19555403)
chr3 (268-393)||(41875569-41875694)
chr3 (264-393)||(48219188-48219317)
chr3 (268-391)||(31014345-31014468)
chr3 (268-393)||(19555876-19556004)
chr3 (271-393)||(37375421-37375543)
chr3 (268-393)||(23584245-23584370)
chr3 (268-393)||(23599068-23599193)
chr3 (268-393)||(37374559-37374684)
chr3 (298-393)||(49752311-49752406)
chr3 (290-393)||(49752863-49752966)
chr3 (268-393)||(24220587-24220712)
chr3 (299-393)||(29342946-29343040)
chr3 (268-393)||(50674637-50674757)
chr3 (299-393)||(38575595-38575689)
chr3 (259-377)||(55282390-55282507)
chr3 (305-393)||(32672736-32672824)
chr3 (273-393)||(47737077-47737196)
chr3 (299-393)||(38575060-38575154)
chr3 (299-387)||(43658854-43658942)
chr3 (306-393)||(40887894-40887981)
chr3 (313-393)||(8427269-8427349)
chr3 (302-393)||(24221125-24221216)
chr3 (290-391)||(43103929-43104030)
chr3 (312-393)||(42356762-42356843)
chr3 (268-332)||(41459138-41459201)
chr3 (328-391)||(3945464-3945527)
chr3 (268-337)||(43658263-43658331)
chr3 (360-393)||(50687185-50687218)
chr3 (357-393)||(43658332-43658368)
chr3 (294-332)||(50687136-50687174)
chr3 (268-309)||(38279417-38279458)
chr3 (360-393)||(40887386-40887419)
chr3 (265-294)||(41459204-41459233)
chr3 (259-304)||(49164694-49164739)
chr3 (255-288)||(49752983-49753016)
chr3 (265-302)||(53269392-53269429)
[»] chr7 (32 HSPs)
chr7 (259-393)||(36682834-36682968)
chr7 (264-391)||(4895037-4895164)
chr7 (268-393)||(36683417-36683542)
chr7 (257-393)||(47813968-47814104)
chr7 (259-393)||(27855565-27855698)
chr7 (259-393)||(46732566-46732700)
chr7 (268-393)||(19816272-19816397)
chr7 (268-393)||(34853399-34853524)
chr7 (268-393)||(47814588-47814713)
chr7 (268-391)||(24043998-24044121)
chr7 (264-391)||(42455925-42456052)
chr7 (265-393)||(34853949-34854077)
chr7 (276-393)||(4894515-4894632)
chr7 (264-393)||(19816845-19816974)
chr7 (268-393)||(22275433-22275557)
chr7 (268-393)||(24323935-24324059)
chr7 (268-393)||(42456469-42456594)
chr7 (266-393)||(22276029-22276156)
chr7 (271-393)||(46814416-46814538)
chr7 (264-393)||(46815015-46815143)
chr7 (268-393)||(30711796-30711921)
chr7 (265-393)||(33805974-33806102)
chr7 (299-391)||(32499288-32499380)
chr7 (290-393)||(32499826-32499928)
chr7 (302-393)||(18520899-18520990)
chr7 (268-392)||(36620694-36620812)
chr7 (258-393)||(36620116-36620251)
chr7 (308-393)||(46012893-46012978)
chr7 (268-393)||(27856096-27856208)
chr7 (268-309)||(84385-84426)
chr7 (264-311)||(33806602-33806649)
chr7 (259-309)||(85086-85136)
[»] chr8 (37 HSPs)
chr8 (255-391)||(11999035-11999171)
chr8 (264-391)||(33114143-33114270)
chr8 (264-393)||(7818478-7818607)
chr8 (268-393)||(11998464-11998589)
chr8 (264-393)||(16889199-16889328)
chr8 (265-393)||(40309453-40309581)
chr8 (257-393)||(39852151-39852287)
chr8 (268-391)||(16889783-16889905)
chr8 (270-393)||(33113585-33113708)
chr8 (278-393)||(38778172-38778287)
chr8 (268-393)||(30115949-30116074)
chr8 (268-393)||(43481234-43481359)
chr8 (268-393)||(43591015-43591140)
chr8 (268-393)||(44061993-44062118)
chr8 (264-393)||(44062549-44062678)
chr8 (265-393)||(43591569-43591697)
chr8 (265-393)||(35237264-35237392)
chr8 (279-393)||(30115386-30115500)
chr8 (259-393)||(43480615-43480749)
chr8 (264-393)||(16879892-16880021)
chr8 (265-393)||(10806390-10806518)
chr8 (268-393)||(7819050-7819175)
chr8 (268-389)||(38778752-38778873)
chr8 (268-393)||(39852756-39852881)
chr8 (298-393)||(10805986-10806081)
chr8 (299-393)||(4374254-4374348)
chr8 (264-393)||(4374945-4375074)
chr8 (268-377)||(16880487-16880596)
chr8 (268-393)||(36848154-36848275)
chr8 (290-393)||(2209036-2209139)
chr8 (268-393)||(4373694-4373819)
chr8 (268-393)||(40907607-40907728)
chr8 (268-393)||(35237828-35237941)
chr8 (264-309)||(41761803-41761848)
chr8 (258-309)||(41762515-41762566)
chr8 (259-297)||(37532575-37532613)
chr8 (259-309)||(43433810-43433860)
[»] chr6 (16 HSPs)
chr6 (258-393)||(33668219-33668354)
chr6 (268-393)||(6032166-6032291)
chr6 (257-393)||(30611298-30611434)
chr6 (264-393)||(5523799-5523928)
chr6 (264-393)||(12809655-12809784)
chr6 (268-393)||(5523208-5523333)
chr6 (268-393)||(12809077-12809202)
chr6 (272-393)||(30610723-30610844)
chr6 (265-393)||(13936593-13936721)
chr6 (256-393)||(6032706-6032843)
chr6 (268-393)||(13944298-13944423)
chr6 (264-393)||(31723837-31723966)
chr6 (268-393)||(33668784-33668908)
chr6 (258-393)||(33648116-33648251)
chr6 (301-391)||(31724403-31724494)
chr6 (365-393)||(4822756-4822784)
[»] chr4 (52 HSPs)
chr4 (268-393)||(20075533-20075658)
chr4 (257-393)||(25370345-25370481)
chr4 (257-393)||(32291012-32291148)
chr4 (257-393)||(48091048-48091184)
chr4 (259-391)||(55815824-55815956)
chr4 (257-391)||(388750-388884)
chr4 (264-393)||(2713796-2713925)
chr4 (264-393)||(12639969-12640098)
chr4 (264-393)||(31876792-31876921)
chr4 (268-391)||(25369791-25369914)
chr4 (255-393)||(20422684-20422822)
chr4 (268-393)||(28223571-28223696)
chr4 (268-393)||(36945176-36945301)
chr4 (268-393)||(48782027-48782152)
chr4 (268-393)||(52597498-52597623)
chr4 (268-393)||(55816403-55816528)
chr4 (265-393)||(37567427-37567555)
chr4 (268-391)||(199007-199130)
chr4 (259-393)||(52597664-52597798)
chr4 (268-393)||(389358-389483)
chr4 (264-393)||(26424357-26424486)
chr4 (264-393)||(32901855-32901984)
chr4 (268-393)||(32902418-32902543)
chr4 (264-393)||(33569724-33569853)
chr4 (268-393)||(40345083-40345208)
chr4 (259-391)||(36944609-36944741)
chr4 (264-393)||(29809040-29809169)
chr4 (268-393)||(36111170-36111294)
chr4 (268-393)||(40848083-40848208)
chr4 (268-393)||(20422139-20422261)
chr4 (268-393)||(12640539-12640664)
chr4 (268-393)||(35427254-35427378)
chr4 (277-393)||(31842676-31842791)
chr4 (278-393)||(31877385-31877500)
chr4 (264-354)||(199218-199308)
chr4 (303-393)||(20076139-20076229)
chr4 (266-393)||(40344509-40344636)
chr4 (259-354)||(40847676-40847771)
chr4 (268-393)||(26423767-26423881)
chr4 (304-391)||(48781526-48781613)
chr4 (268-393)||(3708787-3708906)
chr4 (264-393)||(6862651-6862780)
chr4 (311-387)||(37566954-37567030)
chr4 (268-345)||(48090474-48090551)
chr4 (264-337)||(47321763-47321836)
chr4 (346-391)||(35427837-35427882)
chr4 (276-345)||(47328397-47328466)
chr4 (257-302)||(18501736-18501781)
chr4 (259-308)||(35428238-35428287)
chr4 (298-328)||(35428208-35428238)
chr4 (268-309)||(3221424-3221465)
chr4 (268-309)||(52869455-52869496)
[»] chr2 (40 HSPs)
chr2 (264-393)||(7583746-7583875)
chr2 (264-393)||(9224270-9224399)
chr2 (268-393)||(39477278-39477403)
chr2 (265-393)||(16571123-16571251)
chr2 (258-393)||(4386913-4387048)
chr2 (257-391)||(28223785-28223919)
chr2 (268-393)||(10883295-10883420)
chr2 (268-393)||(11256124-11256249)
chr2 (264-393)||(20244124-20244253)
chr2 (258-393)||(11256693-11256828)
chr2 (268-393)||(3595254-3595379)
chr2 (268-393)||(28224341-28224466)
chr2 (264-391)||(8113255-8113382)
chr2 (268-393)||(6849296-6849421)
chr2 (268-393)||(16887591-16887716)
chr2 (259-393)||(7716670-7716804)
chr2 (259-391)||(6849497-6849629)
chr2 (268-391)||(7583140-7583263)
chr2 (279-393)||(39476534-39476648)
chr2 (265-393)||(3595848-3595976)
chr2 (255-393)||(30161928-30162066)
chr2 (268-393)||(7717238-7717362)
chr2 (264-393)||(8963508-8963637)
chr2 (268-393)||(16571679-16571804)
chr2 (264-393)||(33847877-33848006)
chr2 (290-393)||(20243583-20243686)
chr2 (268-393)||(8112688-8112810)
chr2 (265-391)||(16903045-16903170)
chr2 (294-393)||(467139-467238)
chr2 (271-393)||(17918032-17918154)
chr2 (311-393)||(17918638-17918720)
chr2 (269-393)||(40166802-40166920)
chr2 (265-366)||(40165878-40165979)
chr2 (275-393)||(467294-467412)
chr2 (268-327)||(4386363-4386422)
chr2 (265-311)||(12206793-12206839)
chr2 (358-393)||(12207349-12207384)
chr2 (258-308)||(18949907-18949957)
chr2 (265-311)||(33848496-33848542)
chr2 (265-306)||(43743842-43743883)
[»] scaffold0007 (1 HSPs)
scaffold0007 (257-393)||(11263-11398)
[»] chr5 (24 HSPs)
chr5 (264-393)||(3957504-3957633)
chr5 (265-393)||(28075922-28076050)
chr5 (264-393)||(4929459-4929588)
chr5 (268-393)||(26687508-26687633)
chr5 (268-393)||(26957239-26957364)
chr5 (264-391)||(33430047-33430173)
chr5 (268-393)||(3739616-3739741)
chr5 (268-393)||(4928879-4929004)
chr5 (264-391)||(8813638-8813765)
chr5 (265-383)||(5324366-5324484)
chr5 (299-393)||(42408518-42408612)
chr5 (268-393)||(3958087-3958212)
chr5 (299-393)||(3739039-3739133)
chr5 (279-393)||(42408011-42408125)
chr5 (264-393)||(13738065-13738192)
chr5 (268-393)||(21770002-21770131)
chr5 (259-393)||(26688009-26688136)
chr5 (259-393)||(26957740-26957867)
chr5 (339-393)||(8813134-8813188)
chr5 (268-324)||(5324312-5324368)
chr5 (268-318)||(8813085-8813135)
chr5 (264-309)||(39149468-39149513)
chr5 (269-309)||(25075034-25075074)
chr5 (269-309)||(25133003-25133043)
[»] chr1 (33 HSPs)
chr1 (264-393)||(27816957-27817086)
chr1 (265-393)||(27797689-27797817)
chr1 (259-393)||(1403039-1403173)
chr1 (268-393)||(43368788-43368913)
chr1 (265-393)||(42838942-42839070)
chr1 (274-393)||(42839501-42839620)
chr1 (268-391)||(49533751-49533874)
chr1 (271-393)||(42840266-42840388)
chr1 (259-393)||(49534349-49534483)
chr1 (268-393)||(27797125-27797250)
chr1 (264-393)||(6288157-6288286)
chr1 (268-393)||(7219601-7219725)
chr1 (264-393)||(8560160-8560289)
chr1 (265-393)||(48369487-48369615)
chr1 (268-393)||(52859739-52859866)
chr1 (268-393)||(1403641-1403765)
chr1 (268-393)||(8560696-8560820)
chr1 (273-393)||(43368203-43368323)
chr1 (273-393)||(51248436-51248556)
chr1 (299-393)||(48843915-48844009)
chr1 (268-393)||(42839709-42839833)
chr1 (268-393)||(48843588-48843713)
chr1 (300-391)||(7219048-7219139)
chr1 (299-393)||(51247867-51247961)
chr1 (305-393)||(41563745-41563833)
chr1 (264-393)||(7782644-7782773)
chr1 (268-387)||(41563187-41563306)
chr1 (299-393)||(27934248-27934341)
chr1 (312-393)||(6287672-6287753)
chr1 (304-391)||(37725423-37725510)
chr1 (300-393)||(52859189-52859282)
chr1 (259-309)||(29148939-29148989)
chr1 (303-344)||(37725672-37725713)
[»] scaffold0229 (1 HSPs)
scaffold0229 (259-393)||(15186-15320)
[»] scaffold1095 (1 HSPs)
scaffold1095 (268-393)||(1493-1618)
[»] scaffold0368 (1 HSPs)
scaffold0368 (265-393)||(11738-11865)
[»] scaffold0039 (1 HSPs)
scaffold0039 (264-309)||(90619-90664)


Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-140; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 52828363 - 52828111
Alignment:
Q  7 gtaggcttaaagaccaagcaattgtaattcatacaatacgacacagggtaggtagtaggacgtataaggtgatgcggggtactattcatctataccaacc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52828363 gtaggcttaaagaccaagcaattgtaattcatacaatacgacacagggtaggtagtaggacgtataaggtgatgcggggtactattcatctataccaacc 52828264  T
Q  107 agtgcattgatgatgcttgatgtatatgcctataacggtccatcaatgggccgtggcaagattatgcatgcataaaagtttcttaatcagtgttccatat 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52828263 agtgcattgatgatgcttgatgtatatgcctataacggtccatcaatgggccgtggcaagattatgcatgcataaaagtttcttaatcagtgttccatat 52828164  T
Q  207 gtattagaaactacttttcagtaggtgagatttactcaaaagcacaacaatta 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52828163 gtattagaaactacttttcagtaggtgagatttactcaaaagcacaacaatta 52828111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 3944899 - 3945028
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  3944899 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 3944998  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  3944999 ctagatttttcttcacactatcttccaaca 3945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 23584965 - 23584836
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  23584965 gcatttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 23584866  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||||||    
T  23584865 ctagatttttcttcacactaccttccaaca 23584836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 23599788 - 23599659
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  23599788 gcatttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 23599689  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||||||    
T  23599688 ctagatttttcttcacactaccttccaaca 23599659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 44868011 - 44868140
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||    
T  44868011 gcatttcacataggaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaaca 44868110  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  44868111 ctagatttttcttcacactatcttccaaca 44868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 50687789 - 50687661
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  50687789 catttcacatgggaaaggttaattctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 50687690  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  50687689 tagatttttcttcacactatcttccaaca 50687661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 37373964 - 37374098
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||| | |||    
T  37373964 aggtggcattttacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgttttct 37374063  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||    
T  37374064 caacactagatttttcttcacactatcttccaaca 37374098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 25025178 - 25025307
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  25025178 gcatttcacatgggaaaggttaatcctttcccatcatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 25025277  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    |||||||||| |||||||||||||||||||    
T  25025278 ctagattttttttcacactatcttccaaca 25025307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 29342349 - 29342474
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||| |||||||    
T  29342349 ttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctccctccacactag 29342448  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  29342449 atttttcttcacactatcttccaaca 29342474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 48218599 - 48218724
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||    
T  48218599 ttcacatgagaaaggttaatcttttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctctcaacactag 48218698  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  48218699 atttttcttcacactatcttccaaca 48218724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 32672163 - 32672299
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| |||||| |||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||| |    
T  32672163 ttaggtggcattttacatgggaaaggttaatcctttcccaacatgggaaagttggatttaatgattagattaagtgaagaacatattcttaatatgctct 32672262  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||||    
T  32672263 ctcaacactagatttttcttcacactatcttccaaca 32672299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 55281843 - 55281966
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  55281843 ttcacatgggaaaggttaatcctttcccaccatgggaaaattggatttaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 55281942  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  55281943 atttttcttcacactatcttccaa 55281966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 25025842 - 25025717
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| | |||| |||||||||||||| | ||||||||||||    
T  25025842 ttcacatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagagaagaacatattcttaacatgttctctcaacactag 25025743  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  25025742 atttttcttcacactatcttccaaca 25025717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 44868696 - 44868571
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  44868696 ttcacatgggaaaggttaatcctttcccaccatgggaaaatttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 44868597  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||| ||||||||||||||||    
T  44868596 atttttcttaacactatcttccaaca 44868571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 8427821 - 8427698
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||| |||||||||| |||||||| ||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  8427821 ttcacatggggaaggttaatcctttcccaccatgggaaagttagatttaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 8427722  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  8427721 atttttcttcacactatcttccaa 8427698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 31015012 - 31014877
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| |||||||| |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||    
T  31015012 taggtggcatttcatatgggaaaggttaatcttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctc 31014913  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31014912 tcaacactaaatttttcttcacactatcttccaaca 31014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 37374824 - 37374946
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||||||     |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  37374824 gcatttcacatgggaaaggttaatcctttccc-----gggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 37374918  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||||||    
T  37374919 ctagatttttcttcacactatcttccaa 37374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 42356237 - 42356369
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccacta---tgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctca 360  Q
    |||||||||||||||||||| |||| |||||||| |   ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  42356237 gcatttcacatgggaaaggtcaatcctttcccaccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctca 42356336  T
Q  361 acactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||| ||||    
T  42356337 acactagatttttcttcacactatcttctaaca 42356369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 280 - 393
Target Start/End: Complemental strand, 47737739 - 47737626
Alignment:
Q  280 aggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcac 379  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  47737739 aggttaatcatttcccaccatgggaatgttggattcaatgattagattaagtgaagaacatattcttatcatgctctctcaacactagatttttcttcac 47737640  T
Q  380 actatcttccaaca 393  Q
    ||||||||||||||    
T  47737639 actatcttccaaca 47737626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 50675206 - 50675078
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| |||  ||| |||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||  |||||||||    
T  50675206 catttcacatgggaaaggttaatcctttttcacaatgggaaagttgaattcaatgattagattaagtgaagaacatattattaacatgcactctcaacac 50675107  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  50675106 tagatttttcttcacactatcttccaaca 50675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 19555274 - 19555403
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||  ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||| |||||||||||||| | ||||||||    
T  19555274 gcatttcacatgaaaaaggttaatcttttcccatcatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctctcaaca 19555373  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||||||    
T  19555374 ctagatttttcttcacactatattccaaca 19555403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 41875694 - 41875569
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||| |||||||| |||||||||||   || ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  41875694 ttcagatgggaaaagttaatcattttttaccatgggaaagttgggttcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 41875595  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  41875594 atttttcttcacactatcttccaaca 41875569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 48219317 - 48219188
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||| |||||||||||||||||  |||| ||| |||||||| |||||||||||||||||||||||||  ||| |||||||||||||||| ||||||||    
T  48219317 gcattttacatgggaaaggttaattctttctcaccatgggaaaattggattcaatgattagattaagtgatgaatatattcttaacatgctctctcaaca 48219218  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||| ||||||||||||||||||||||||    
T  48219217 ctagacttttcttcacactatcttccaaca 48219188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 31014345 - 31014468
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| ||||| |||||| ||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||     
T  31014345 ttcacatgagaaagattaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactaa 31014444  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  31014445 atttttcttcacactatcttccaa 31014468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 19556004 - 19555876
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttg---gattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||| |||||||||||| |||||||  |||||||||| |   |||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  19556004 ttcacatgagaaaggttaatcctttcccatcatgggaaagtagtaggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 19555905  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  19555904 tagatttttcttcacactatcttccaaca 19555876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 37375543 - 37375421
Alignment:
Q  271 acatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatt 370  Q
    |||||||||||||||||| |||||||| ||  ||||||||||||| |||||||||||||||| |||| || ||||||||||| | |||||||||||||||    
T  37375543 acatgggaaaggttaatcctttcccaccataagaaagttggattcgatgattagattaagtgaagaacatcttcttaacatgttctctcaacactagatt 37375444  T
Q  371 tttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||    
T  37375443 tttcttcacactatcttccaaca 37375421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 23584245 - 23584370
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||| | |||||||| |||    
T  23584245 ttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctcaacagtag 23584344  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  23584345 atttttcttcacactatcttctaaca 23584370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 23599068 - 23599193
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||| | |||||||| |||    
T  23599068 ttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattcttaacatgttctctcaacagtag 23599167  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  23599168 atttttcttcacactatcttctaaca 23599193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 37374684 - 37374559
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||| ||||| | |||||||  || ||||||||||||||||||||||||||||||| |||| ||||| |||||||| | ||||||||||||    
T  37374684 ttcacatgggaaatgttaaccttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactag 37374585  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  37374584 atttttcttcacactatcttccaaca 37374559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 49752311 - 49752406
Alignment:
Q  298 tatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49752311 tatgggaaagtaggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 49752406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 49752966 - 49752863
Alignment:
Q  290 tttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttcc 389  Q
    ||||| || |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  49752966 tttcctaccatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctctcaacactagatttttcttcacactatcttcc 49752867  T
Q  390 aaca 393  Q
    ||||    
T  49752866 aaca 49752863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 24220587 - 24220712
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||  ||||| || |||| ||| |||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||||    
T  24220587 ttcacatgggaaaggttaattctttcctaccatggaaaaattggattcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacactag 24220686  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||| ||||    
T  24220687 atttttcttcacactattttcgaaca 24220712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 29343040 - 29342946
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  29343040 atggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttctgcacactatcttccaaca 29342946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 50674637 - 50674757
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||     ||||||||||||| |||| ||||| ||| |||||| ||||||||||||    
T  50674637 ttcacatgagaaaggttaatcttttcccaccatgggaaagttggatt-----attagattaagtgtagaacatatttttagcatgctctctcaacactag 50674731  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  50674732 atttttcttcacactatcttccaaca 50674757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 38575689 - 38575595
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||| |||||||||||||||||||| |||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  38575689 atggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaaca 38575595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 55282507 - 55282390
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||||||||||||| | |||||| |||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||  ||    
T  55282507 aggtggcatttcacatgggaa-gtttaatcctttcccaccatgggaaagttggatttaatgattagattaagtgaagaacatattcttaacatgctccct 55282409  T
Q  359 caacactagatttttcttc 377  Q
    | |||||||||||||||||    
T  55282408 cgacactagatttttcttc 55282390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 32672824 - 32672736
Alignment:
Q  305 aagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||| ||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32672824 aagttggatttaatgattagattaagcgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 32672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 273 - 393
Target Start/End: Original strand, 47737077 - 47737196
Alignment:
Q  273 atgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttt 372  Q
    ||||||||||||| || ||||||||  |||| ||||||||||||| |||||||||||||| |||| |||||||||||||| | |||||| ||||||||||    
T  47737077 atgggaaaggttattcctttcccacc-tgggtaagttggattcaacgattagattaagtggagaacatattcttaacatgttctctcaatactagatttt 47737175  T
Q  373 tcttcacactatcttccaaca 393  Q
    ||||| |||||||||||||||    
T  47737176 tcttcgcactatcttccaaca 47737196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 38575060 - 38575154
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||||||| | ||||||||||||||||||||||| |||||||| |||||    
T  38575060 atgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaacactagatttttcttcaaactatctttcaaca 38575154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 43658942 - 43658854
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatctt 387  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| | |||||| |||||||||||||||||||||||    
T  43658942 atgggaaagttggattcaatgattagattaagtgaagaacatattcttaacaggctctttcaacattagatttttcttcacactatctt 43658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 306 - 393
Target Start/End: Complemental strand, 40887981 - 40887894
Alignment:
Q  306 agttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  40887981 agttgtattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatattctaaca 40887894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 8427269 - 8427349
Alignment:
Q  313 ttcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| || |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  8427269 ttcaatgattagattaaatgaagaacatattcttatcatgctctctcaacactagatttttcttcacactatcttccaaca 8427349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 24221216 - 24221125
Alignment:
Q  302 ggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||| |||||||| |||||||| |||| | |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  24221216 ggaaagttggatttaatgattatattaagtgaagaacacattcttaacatgctctctcaacactagatttttcttcaaactatcttctaaca 24221125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 43103929 - 43104030
Alignment:
Q  290 tttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttcc 389  Q
    |||||||| || |||||||||||||||| |||| ||||||||| | || |||||||||||||||| | |||| |||| ||||||||||||||||||| ||    
T  43103929 tttcccaccataggaaagttggattcaacgattggattaagtgaataacatattcttaacatgctctttcaatactatatttttcttcacactatctccc 43104028  T
Q  390 aa 391  Q
    ||    
T  43104029 aa 43104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 42356843 - 42356762
Alignment:
Q  312 attcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||| || | || |||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  42356843 attcaatgattagattaaatgaataatatattcctagcattctctctcaacactagatttttcttcacactatcttccaaca 42356762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 41459138 - 41459201
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtg 332  Q
    ||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||    
T  41459138 ttcacatgggaaaggttaatcctttcccaccatgagaaagtt-gattcaatgattagattaagtg 41459201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 3945527 - 3945464
Alignment:
Q  328 aagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    ||||| |||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  3945527 aagtgaagaacatatttttaacatgttctctcaacactagatttttcttcacactatcttccaa 3945464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 43658263 - 43658331
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaa 337  Q
    ||||||||| || |||||||| ||||  |||||||||||||| |||||||||||||||||||||| ||||    
T  43658263 ttcacatggaaacggttaatcctttcttactatgggaaagtt-gattcaatgattagattaagtgaagaa 43658331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 50687185 - 50687218
Alignment:
Q  360 aacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||||||    
T  50687185 aacactagatttttcttcacactatcttccaaca 50687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 43658332 - 43658368
Alignment:
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||| ||||    
T  43658332 ctcaacactagatttttcttcacactatcttctaaca 43658368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 50687136 - 50687174
Alignment:
Q  294 ccactatgggaaagttggattcaatgattagattaagtg 332  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  50687136 ccactatgagaaagttggattcaataattagattaagtg 50687174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 38279417 - 38279458
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  38279417 ttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 38279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 40887386 - 40887419
Alignment:
Q  360 aacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||| |||||    
T  40887386 aacactagatttttcttcacactatctttcaaca 40887419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Complemental strand, 41459233 - 41459204
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcc 294  Q
    ||||||||||||||||||||||||||||||    
T  41459233 catttcacatgggaaaggttaatcatttcc 41459204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 49164739 - 49164694
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatggga 304  Q
    |||| ||||||||||||||||||||||||| |||  ||||||||||    
T  49164739 aggtggcatttcacatgggaaaggttaatcctttttcactatggga 49164694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 49753016 - 49752983
Alignment:
Q  255 aattaggttgcatttcacatgggaaaggttaatc 288  Q
    |||||||| |||||||||||||||||||||||||    
T  49753016 aattaggtggcatttcacatgggaaaggttaatc 49752983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 53269429 - 53269392
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgg 302  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  53269429 catttcacatgggaaaggttaatcctttcccaccatgg 53269392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 36682834 - 36682968
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||    
T  36682834 aggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctct 36682933  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||    
T  36682934 caacactagatttttcttcacactatcttccaaca 36682968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 4895164 - 4895037
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||    
T  4895164 gcatttcacatgggaaaggttaatcattttccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaaca 4895065  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||||||    
T  4895064 ctagatttttcttcacactatcttccaa 4895037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 36683542 - 36683417
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  36683542 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctcaacactag 36683443  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  36683442 atttttcttcacactatcttccaaca 36683417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 47813968 - 47814104
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| ||||||||  ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  47813968 ttaggtggcatttcatgtgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 47814067  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||||    
T  47814068 ctcaacactagatttttcttcacactatcttccaaca 47814104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 27855565 - 27855698
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||| ||||||||| |||||| |||    
T  27855565 aggtggcatttcacatgggaaaggttaatcatttcccaccatgagaaagttg-attcaatgattagattaagtgaagaacatattcttatcatgctctct 27855663  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||    
T  27855664 caacactagatttttcttcacactatcttccaaca 27855698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 46732566 - 46732700
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||| || |||    
T  46732566 aggtggcatttcacatgggaaaggttaattctttcccactatggaaaagttggattcaatgattagattaagtgaataacatattcttaacattctctct 46732665  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||    
T  46732666 caacactagatttttcttcacactatcttccaaca 46732700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 19816272 - 19816397
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||    
T  19816272 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgtaaaacatattcttaacatgctctctcaacactag 19816371  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||    
T  19816372 atttttcttcacactatctttcaaca 19816397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 34853399 - 34853524
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  34853399 ttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactag 34853498  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  34853499 atttttcttcacactatcttccaaca 34853524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 47814713 - 47814588
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  47814713 ttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 47814614  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||    
T  47814613 atttttcttcacactattttccaaca 47814588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 24044121 - 24043998
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  24044121 ttcacatgggaaaggttaatcctttcccaccatgggaaagttttattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 24044022  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  24044021 atttttcttcacactatcttccaa 24043998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 42455925 - 42456052
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| | |||||| |||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||    
T  42455925 gcatttcacatgggaaaggttaatcctttcccaccacgggaaaattggattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaaca 42456024  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||||||    
T  42456025 ctagatttttcttcacactatcttccaa 42456052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 34854077 - 34853949
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| |||||||| || |||||||| || ||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  34854077 catttcacatgggaaaggttaatcctttcccaccataggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 34853978  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| ||||||||||||    
T  34853977 tagatttttcttcacaatatcttccaaca 34853949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 276 - 393
Target Start/End: Original strand, 4894515 - 4894632
Alignment:
Q  276 ggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttct 375  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||    
T  4894515 ggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttct 4894614  T
Q  376 tcacactatcttccaaca 393  Q
    ||||||||||||||||||    
T  4894615 tcacactatcttccaaca 4894632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 19816974 - 19816845
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||| |||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  19816974 gcatttcatatgggaaaggttaatccttttccaccatgggaaagttggattaaatgattagattaagtgaagaacatatttttaacatgctctctcaaca 19816875  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||||||    
T  19816874 ctagatttttcttcacactatattccaaca 19816845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 22275433 - 22275557
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  22275433 ttcacatggaaaaggttaatcatttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 22275531  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  22275532 atttttcttcacactatcttctaaca 22275557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 24324059 - 24323935
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| | ||| ||||||||    
T  24324059 ttcacatgggaaaggttaatcatttcccactatgggaaa-ttggattcaataattagattaagtgaagaacatattcttaacatgttctctgaacactag 24323961  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||| |||||||||||||||    
T  24323960 atttttcttctcactatcttccaaca 24323935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 42456594 - 42456469
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| ||||| |||||||| | ||||||||| ||    
T  42456594 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattacattaagtgaagaacatatttttaacatgttctctcaacacaag 42456495  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  42456494 atttttcttcacactatcttccaaca 42456469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 22276156 - 22276029
Alignment:
Q  266 atttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacact 365  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||| ||||| |||||||||| | ||||||||    
T  22276156 attttacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatatttttaacatgctctttcaacact 22276057  T
Q  366 agatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||| |||||    
T  22276056 agatttttcttcacactatctttcaaca 22276029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 46814416 - 46814538
Alignment:
Q  271 acatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatt 370  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||| |||| |||||||||||||||| | |||||| ||||||    
T  46814416 acatgggaaaggttaatcctttcccaccatgggaaagttgaattcaacgattagattaagtgaagaacatattcttaacatgctctttcaacattagatt 46814515  T
Q  371 tttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||    
T  46814516 tttcttcacactatcttccaaca 46814538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 46815143 - 46815015
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||    
T  46815143 gcatttcacatggaaaag-ttaattatttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctctcaaca 46815045  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
     |||||||||||| ||||||||||||||||    
T  46815044 ttagatttttcttaacactatcttccaaca 46815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 30711796 - 30711921
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||| ||||||||||  |||||||| |||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||| |||    
T  30711796 ttcacatggaaaaggttaattttttcccaccatggaaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacattag 30711895  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  30711896 atttttcttcacactatcttctaaca 30711921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 33805974 - 33806102
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||   |||||||| |||| |||| |||||||||||||||||||| |||||||| |||| |||||||||||||||| | |||||||    
T  33805974 catttcacatgggaaagaccaatcattttccaccatggaaaagttggattcaatgattaaattaagtgaagaacatattcttaacatgctctttcaacac 33806073  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||| |||||||||||||||    
T  33806074 tagatttttcttcgcactatcttccaaca 33806102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 32499288 - 32499380
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  32499288 atgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcatcacactatcttccaa 32499380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 32499928 - 32499826
Alignment:
Q  290 tttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttcc 389  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  32499928 tttcccacaacgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagattttt-ttcacactatcttcc 32499830  T
Q  390 aaca 393  Q
    ||||    
T  32499829 aaca 32499826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 18520899 - 18520990
Alignment:
Q  302 ggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| | | |||||||||||||||||||||||||||||| |||||    
T  18520899 ggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactagatttttcttcacactatctttcaaca 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 36620812 - 36620694
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||| ||||||||||||||| |||   |||   ||||||||||||||||||||||||||| |||| ||||| ||||||||||  |||||||||||    
T  36620812 ttcacatggaaaaggttaatcattttcca---tgg---agttggattcaatgattagattaagtgaagaacatattattaacatgctcactcaacactag 36620719  T
Q  368 atttttcttcacactatcttccaac 392  Q
    ||||||||| |||||||||||||||    
T  36620718 atttttctttacactatcttccaac 36620694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 36620116 - 36620251
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| |||||||| |||||||||||||||| ||| | |  ||| |||||||| |||||||||||| |||||||| | || ||||| |||||||||| |     
T  36620116 taggtggcatttcatatgggaaaggttaatctttttctatcatgagaaagttgaattcaatgattaaattaagtgaaaaacatattattaacatgctctt 36620215  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| |||||| ||||||||||||    
T  36620216 tcaacactagattttttttcacaatatcttccaaca 36620251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 46012978 - 46012893
Alignment:
Q  308 ttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactaga-tttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  46012978 ttggattcaatgattagattaagtgaagaacatatt-ttaacatgctctctcaacactagattttttcttcacactatctttcaaca 46012893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 27856208 - 27856096
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||             ||||| |||| |||||||||||||| | ||||||||||||    
T  27856208 ttcacatgggaaaggttaatcatttcccaccatggaaaagttggatt-------------aagtgaagaacatattcttaacatgttctctcaacactag 27856122  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| || ||||||    
T  27856121 atttttcttcacactaactaccaaca 27856096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 84385 - 84426
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  84385 ttcacatgggaaaggtgaatcctttcccactatgggaaagtt 84426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 33806649 - 33806602
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttgg 311  Q
    |||||||||||||||||||| |||| |||||||| || ||||||||||    
T  33806649 gcatttcacatgggaaaggtcaatcctttcccaccattggaaagttgg 33806602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 85136 - 85086
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||| |||||||||||||||||||| |||| |||||||| |||| ||||||    
T  85136 aggtggcatttcacatgggaaaggtgaatcctttcccaccatggaaaagtt 85086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 255 - 391
Target Start/End: Complemental strand, 11999171 - 11999035
Alignment:
Q  255 aattaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgct 354  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  11999171 aattgggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagatgaagtgaagaacatattcttaacatgct 11999072  T
Q  355 atctcaacactagatttttcttcacactatcttccaa 391  Q
     ||||||||||||||||||||||||||||||||||||    
T  11999071 ctctcaacactagatttttcttcacactatcttccaa 11999035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 33114270 - 33114143
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  33114270 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 33114171  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||||||    
T  33114170 ctagatttttcttcacactatcttccaa 33114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 7818478 - 7818607
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||    
T  7818478 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctctcaaca 7818577  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  7818578 ctagatttttcttcacactatcttccaaca 7818607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 11998464 - 11998589
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  11998464 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 11998563  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  11998564 atttttcttcacactatcttccaaca 11998589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 16889199 - 16889328
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| | ||||||    
T  16889199 gcatttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctttcaaca 16889298  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  16889299 ctagatttttcttcacactatcttccaaca 16889328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 40309581 - 40309453
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||| | |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  40309581 catttcacatagaaaaggttaatcatttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 40309482  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  40309481 tagatttttcttcacactatcttccaaca 40309453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 39852151 - 39852287
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||      
T  39852151 ttaggtggcatttcaaatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctcc 39852250  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39852251 ctcaacactagattttttttcacactatcttccaaca 39852287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 16889905 - 16889783
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  16889905 ttcacatgggaa-ggttaatcatttcccaccatgggaaagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactag 16889807  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  16889806 atttttcttcacactatcttccaa 16889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 33113585 - 33113708
Alignment:
Q  270 cacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagat 369  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||||    
T  33113585 cacatgggaaagattaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctcttaacactagat 33113684  T
Q  370 ttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||    
T  33113685 ttttcttcacactatcttccaaca 33113708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 278 - 393
Target Start/End: Original strand, 38778172 - 38778287
Alignment:
Q  278 aaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttc 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||||||    
T  38778172 aaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttc 38778271  T
Q  378 acactatcttccaaca 393  Q
    ||||||||||||||||    
T  38778272 acactatcttccaaca 38778287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 30116074 - 30115949
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||| | ||||||||||||    
T  30116074 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaatatattcttaacatgttctctcaacactag 30115975  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  30115974 atttttcttcacactatcttccaaca 30115949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 43481359 - 43481234
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  43481359 ttcacatgaaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctctcaacactag 43481260  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  43481259 atttttcttcacactatcttccaaca 43481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 43591015 - 43591140
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||| || |||| |||||||||||||| | ||||||||||||    
T  43591015 ttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctcaacactag 43591114  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  43591115 atttttcttcacactatcttccaaca 43591140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 44061993 - 44062118
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||||||||||  ||||| || |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  44061993 ttcacatgagaaaggttaatactttccaaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 44062092  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  44062093 atttttcttcacactatcttccaaca 44062118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 44062678 - 44062549
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||| || ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  44062678 gcatttcatataggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtggagaatatattattaacatgctctctcaaca 44062579  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  44062578 ctagatttttcttcacactatcttccaaca 44062549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 43591697 - 43591569
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||| |||| |||||||||||||||| ||| |||||    
T  43591697 catttcacatgggaaaggttaattatttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctcttaacac 43591598  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| ||||||||||||    
T  43591597 tagatttttcttcacaatatcttccaaca 43591569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 35237264 - 35237392
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| | |||| ||    
T  35237264 catttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaataacatattcttaacatgctctttcaatac 35237363  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    || |||||||||||||||||||| |||||    
T  35237364 taaatttttcttcacactatctttcaaca 35237392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 30115386 - 30115500
Alignment:
Q  279 aaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttca 378  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||    
T  30115386 aaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttca 30115485  T
Q  379 cactatcttccaaca 393  Q
    |||||||||||||||    
T  30115486 cactatcttccaaca 30115500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 43480615 - 43480749
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| |||  ||| |||||||||||||||| ||||||||||||||||| |||| |||||||||||||| | |||    
T  43480615 aggtggcatttcacatgggaaaggttaatctttttacaccatgggaaagttggattaaatgattagattaagtgaagaacatattcttaacatgttctct 43480714  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||| ||| ||||    
T  43480715 caacactagatttttcttcacactatattcgaaca 43480749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 16879892 - 16880021
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||| ||||||||||||| |  ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| |    
T  16879892 gcatttcacatgggaaaagttaatcatttcctatcatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaata 16879991  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
     | |||||||||||||||||||||||||||    
T  16879992 tttgatttttcttcacactatcttccaaca 16880021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 10806518 - 10806390
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||| |||||||  |||| |||||||||||||||| ||| || ||    
T  10806518 catttcacatgggaaaggttaatcttttcctaccatgggaaagtttgattcaatgattaaattaagtaaagaacatattcttaacatgctctcttaaaac 10806419  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  10806418 tagatttttcttcacactatcttccaaca 10806390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 7819175 - 7819050
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  7819175 ttcacatgggaaagattaatcttttcccaccatgcgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 7819076  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| || ||||||    
T  7819075 atttttcttcacactaactaccaaca 7819050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 38778873 - 38778752
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| ||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||| |||| ||||| ||||||| || ||||||||||||    
T  38778873 ttcacatgagaaaggttaatcatttctcaccatgagaaagttgtattcaatgattagattaagtgaagaatatatttttaacatactctctcaacactag 38778774  T
Q  368 atttttcttcacactatcttcc 389  Q
    ||||||||||||||||||||||    
T  38778773 atttttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 39852881 - 39852756
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||||||||||| |||||||| ||   |||||| |||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  39852881 ttcacatgagaaaggttaatcctttcccaccataaaaaagttagattcaattattagattaagtgaagaatatattcttaacatgctctctcaacactag 39852782  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  39852781 atttttcttcacactatcttccaaca 39852756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 393
Target Start/End: Original strand, 10805986 - 10806081
Alignment:
Q  298 tatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10805986 tatgggaaagttggattcaatgattagattaaatgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 10806081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 4374348 - 4374254
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  4374348 atgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaaca 4374254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 4375074 - 4374945
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||| ||||||||| | |||||||| |||| ||| |||||||||||||||||||| ||||||||| |||| ||||| |||||||||| | ||||||    
T  4375074 gcatttcatatgggaaagatgaatcattttccaccatgagaaagttggattcaatgattggattaagtgaagaacatatttttaacatgctctttcaaca 4374975  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||| ||||||||||||||||    
T  4374974 ctagatttttctttacactatcttccaaca 4374945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 377
Target Start/End: Complemental strand, 16880596 - 16880487
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  16880596 ttcacatgggaaagattaatcctttcccaccatgtgaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 16880497  T
Q  368 atttttcttc 377  Q
    ||||||||||    
T  16880496 atttttcttc 16880487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 36848275 - 36848154
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||    ||||||||||||    
T  36848275 ttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacat----tctcaacactag 36848180  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||    
T  36848179 atttttcttcacactattttccaaca 36848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 393
Target Start/End: Original strand, 2209036 - 2209139
Alignment:
Q  290 tttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttcc 389  Q
    |||||||| ||| ||||||| |||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2209036 tttcccaccatgagaaagttcgattcaatgattagattaagtgaataacatattcttaacatgctctctcaacactagatttttcttcacactatcttcc 2209135  T
Q  390 aaca 393  Q
    ||||    
T  2209136 aaca 2209139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 4373694 - 4373819
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||| |||||||||||||||  || ||||||||| |||||||||||| |||||||| |||| |||||||||||||| | || |||||||||    
T  4373694 ttcacatgggaaatgttaatcatttcccatcataggaaagttgaattcaatgattatattaagtgaagaacatattcttaacatgttctcgcaacactag 4373793  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| || ||||||    
T  4373794 atttttcttcacactaactaccaaca 4373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 40907607 - 40907728
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||||||||| |||| |||||||||||||| | |   |||||||     
T  40907607 ttcacatgggaaaggttaatcctttcccaccacgggaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttct---aacactaa 40907702  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||| |||||||||||| ||||    
T  40907703 atttttctccacactatcttctaaca 40907728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 35237941 - 35237828
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| || | |||||| |||||||| ||||||||||||| |||| ||||||           ||| ||||||||    
T  35237941 ttcacatgggaaaggttaatcctttcccaccatagaaaagtt-gattcaataattagattaagtgaagaacatattc-----------tcttaacactag 35237854  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  35237853 atttttcttcacactatcttctaaca 35237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 41761803 - 41761848
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||    
T  41761803 gcatttcacatgggaaaggttaatcctttcccaccatgggacagtt 41761848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 41762566 - 41762515
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    ||||| |||||||||||||||||| |||||| |||||||| |||||| ||||    
T  41762566 taggtggcatttcacatgggaaagtttaatcttttcccaccatgggacagtt 41762515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 37532575 - 37532613
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccac 297  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  37532575 aggtggcatttcacatgggaaaggttaatcctttcccac 37532613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 43433810 - 43433860
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||||||||||    
T  43433810 aggtggcatttaacatgggaaaggggaatcatttcccaccatgggaaagtt 43433860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 33668219 - 33668354
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||||| ||||| ||    
T  33668219 taggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaatatgctctc 33668318  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  33668319 tcaacactagatttttcttcacactatcttccaaca 33668354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 6032166 - 6032291
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||| |||||    
T  6032166 ttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaagactag 6032265  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  6032266 atttttcttcacactatcttccaaca 6032291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 30611434 - 30611298
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| |||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |    
T  30611434 ttaggtggcatttcacatgagaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaactgaagaacatattcttaacatgctct 30611335  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||||    
T  30611334 ctcaacactagatttttcttcacactatcttccaaca 30611298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 5523928 - 5523799
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||| |    
T  5523928 gcatttcacatgggaaaggttaatcttttcccaccattggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaga 5523829  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  5523828 ctagatttttcttcacactatcttccaaca 5523799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 12809784 - 12809655
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  12809784 gcatttcacatgggaaaggttaatcctttcccatggtgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaaca 12809685  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  12809684 ctagatttttcttcacactatcttccaaca 12809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 5523208 - 5523333
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  5523208 ttcacatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 5523307  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  5523308 atttttcttcacactatcttccaaca 5523333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 12809077 - 12809202
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||| | | ||||||||||||    
T  12809077 ttcacatgggaaaggttaatcctttcccactataggaaagttggatgcaatgattagattaagtgaagaacatattcttaacaagttctctcaacactag 12809176  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  12809177 atttttcttcacactatcttccaaca 12809202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 272 - 393
Target Start/End: Original strand, 30610723 - 30610844
Alignment:
Q  272 catgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagattt 371  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  30610723 catgggaaaggttaatcattttccaccatgggaaaattggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagattt 30610822  T
Q  372 ttcttcacactatcttccaaca 393  Q
    ||||| ||||||||||||||||    
T  30610823 ttcttgacactatcttccaaca 30610844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 13936721 - 13936593
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||  |||| |||||||||||||||| |||||||||    
T  13936721 catttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtaaagaacatattcttaacatgctctctcaacac 13936622  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| ||||||||||||    
T  13936621 tagatttttcttcacaatatcttccaaca 13936593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 393
Target Start/End: Complemental strand, 6032843 - 6032706
Alignment:
Q  256 attaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgcta 355  Q
    ||||||| |||||||| |||| ||||||||||  |||| ||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||||     
T  6032843 attaggtggcatttcatatggaaaaggttaattttttctcaccatgagaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctc 6032744  T
Q  356 tctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6032743 tctcaacactagatttttcttcacactatcttccaaca 6032706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 13944298 - 13944423
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||| || |||| |||||||||||||| | ||||||||||||    
T  13944298 ttcatatgggaaagattaatcatttcccatcatgggaaagttgaattcaatgattagattaaatgaagaacatattcttaacatgatctctcaacactag 13944397  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  13944398 atttttcttcacactatcttccaaca 13944423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 31723837 - 31723966
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||| | |||||||||||||||| ||||| || |||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||| ||||| ||    
T  31723837 gcattttatatgggaaaggttaatcctttcctaccatgggaaatttggatttaatgattagattaagtgaagaacatattcttaacatgctctctcagca 31723936  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||| ||||||||||||||||||||||||    
T  31723937 ctagaattttcttcacactatcttccaaca 31723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 33668908 - 33668784
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||| ||||| |||||||||||||||| || | ||||||||||||||||||||||||||||| |||| ||||| |||||||| | ||||||||||||    
T  33668908 ttcacattggaaatgttaatcatttcccaccatagaaaagttggattcaatgattagattaagtgaagaatatatttttaacatg-tttctcaacactag 33668810  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  33668809 atttttcttcacactatcttccaaca 33668784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 33648251 - 33648116
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| |||||||||||||||||||| |||  |||| ||| || ||||| |||||||||||||||  |||||||| |||| ||||||||||| || | |     
T  33648251 taggtagcatttcacatgggaaaggtcaattctttcacaccataggaaaattggattcaatgattgaattaagtgaagaatatattcttaacgtgttctt 33648152  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  33648151 tcaacactagatttttcttcacactatcttccaaca 33648116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 391
Target Start/End: Complemental strand, 31724494 - 31724403
Alignment:
Q  301 gggaaagttggattcaatgatta-gattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||  ||||||||| |||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  31724494 gggaaagttggattcaatgattttgattaagtgaagaatatattcttaacatgctctttcaacacaagatttttcttcacactatcttccaa 31724403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 4822756 - 4822784
Alignment:
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  4822756 tagatttttcttcacactatcttccaaca 4822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 6e-53; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 20075533 - 20075658
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  20075533 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 20075632  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  20075633 atttttcttcacactatcttccaaca 20075658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 25370481 - 25370345
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  25370481 ttaggtggcattttacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 25370382  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25370381 ctcaaaactagatttttcttcacactatcttccaaca 25370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 32291012 - 32291148
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  32291012 ttaggtggcatttcacatgggaaaggttaatcatttccaatcatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 32291111  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32291112 ctcaacactagatttttcttcacactatctttcaaca 32291148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 48091184 - 48091048
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  48091184 ttaggtggcatttcatatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 48091085  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48091084 ctcaacactagatttttcttcacactatcatccaaca 48091048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 55815824 - 55815956
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| |||    
T  55815824 aggtggcatttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttatcatgctctct 55815923  T
Q  359 caacactagatttttcttcacactatcttccaa 391  Q
     ||||||||||||||||||||||||||||||||    
T  55815924 taacactagatttttcttcacactatcttccaa 55815956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 257 - 391
Target Start/End: Original strand, 388750 - 388884
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || ||||| |||||||||| |    
T  388750 ttaggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctct 388849  T
Q  357 ctcaacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||||||||||||||||||||    
T  388850 ctcaacactagatttttcttcacactatcttccaa 388884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 2713925 - 2713796
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  2713925 gcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 2713826  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
     |||||||||||||||||||||||||||||    
T  2713825 ttagatttttcttcacactatcttccaaca 2713796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 12639969 - 12640098
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  12639969 gcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 12640068  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||| ||||||||||    
T  12640069 ctagatttttcttcacactgtcttccaaca 12640098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 31876792 - 31876921
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  31876792 gcatttcacatgggaaaggttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 31876891  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  31876892 ctagatttttcttcacactatcttccaaca 31876921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 25369791 - 25369914
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  25369791 ttcacatgggaaaggttaatccttttccactatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 25369890  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||| ||||||||||    
T  25369891 atttttcttcacaatatcttccaa 25369914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 255 - 393
Target Start/End: Complemental strand, 20422822 - 20422684
Alignment:
Q  255 aattaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgct 354  Q
    |||||||| |||||||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20422822 aattaggtggcatttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgct 20422723  T
Q  355 atctcaacactagatttttcttcacactatcttccaaca 393  Q
     ||||||||||||||||||||||||||||| ||||||||    
T  20422722 ctctcaacactagatttttcttcacactatattccaaca 20422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 28223571 - 28223696
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  28223571 ttcacatgggaaaggttaatcttttccctctatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacacgctctctcaacactag 28223670  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  28223671 atttttcttcacactatcttccaaca 28223696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 36945301 - 36945176
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  36945301 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 36945202  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  36945201 atttttcttcacactatcttccaaca 36945176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 48782152 - 48782027
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||| | ||||||||||||    
T  48782152 ttcacatgggaaaggttaatcatttcgcaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactag 48782053  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  48782052 atttttcttcacactatcttccaaca 48782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 52597498 - 52597623
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  52597498 ttcacatgggaaaggttaatcttttcccaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 52597597  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  52597598 atttttcttcacactatcttccaaca 52597623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 55816528 - 55816403
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||    
T  55816528 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactag 55816429  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  55816428 atttttcttcacactatcttccaaca 55816403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 37567555 - 37567427
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||||||||    
T  37567555 catttcacatgggaaaggttaatacttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaacac 37567456  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  37567455 tagatttttcttcacactatcttccaaca 37567427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 199007 - 199130
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  199007 ttcacatgggaaaggttaatcctttcccaccatgggaaagttaaattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 199106  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  199107 atttttcttcacactatcttccaa 199130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 52597798 - 52597664
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| |||  ||| || ||||||||||||||||||||||||||||||| |||| ||||||||| |||||| |||    
T  52597798 aggtggcatttcacatgggaaaggttaatcctttttcaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaccatgctctct 52597699  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||    
T  52597698 caacactagatttttcttcacactatcttccaaca 52597664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 389483 - 389358
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  389483 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcagtgattagattaagtgaagaacatattcttaacatgttctctcaacactag 389384  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  389383 atttttcttcacactatcttccaaca 389358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 26424486 - 26424357
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||||||||||| |  ||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  26424486 gcatttcacatgggaaaggttagttcttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaaca 26424387  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  26424386 ctagatttttcttcacactatcttccaaca 26424357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 32901855 - 32901984
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||| | | ||| ||| |||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||    
T  32901855 gcatttcacatgggaaaagattatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctttctcaaca 32901954  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  32901955 ctagatttttcttcacactatcttccaaca 32901984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 32902543 - 32902418
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||||||||||  |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||    
T  32902543 ttcacatgagaaaggttaatattttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctttcaacactag 32902444  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  32902443 atttttcttcacactatcttccaaca 32902418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 33569724 - 33569853
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||| |||| ||||||| |||||||| | ||||||    
T  33569724 gcatttcacatgggaaaggtcaatcctttcccaccatggaaaagttggattcaataattagattaagtgaagaacatattctcaacatgctctttcaaca 33569823  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  33569824 ctagatttttcttcacactatcttccaaca 33569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 40345208 - 40345083
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||| ||||| |||| ||| | ||||||||||||    
T  40345208 ttcacatgggaaaggttaatcttttcccacaatgggaaagttagattcaatgattagattaagtgaagaacatatttttaatatggtctctcaacactag 40345109  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  40345108 atttttcttcacactatcttccaaca 40345083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 36944609 - 36944741
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||||||| | |||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| | |    
T  36944609 aggtggcatttcacacgtgaaaggttaatctttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctcttt 36944708  T
Q  359 caacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||||||||||||||||||    
T  36944709 caacactagatttttcttcacactatcttccaa 36944741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 29809169 - 29809040
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||| |||||||||||||||||||||  |  |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  29809169 gcatttcatatgggaaaggttaatcatttcttatcatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctttcaaca 29809070  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||||||    
T  29809069 ctagatttttcttcacactattttccaaca 29809040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 36111294 - 36111170
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||  | ||| ||||||||    
T  36111294 ttcacatgggaaaggttaatcctttcccaccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatattctctaaacactag 36111196  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  36111195 atttttcttcacactatcttccaaca 36111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 40848208 - 40848083
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| | ||||||||||      
T  40848208 ttcacatggaaaaggttaatcatttctcactatgggaaagtttgattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactga 40848109  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||    
T  40848108 atttttcttcacactatctttcaaca 40848083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 20422139 - 20422261
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||   ||| |||||||||||||||| ||||||||||||    
T  20422139 ttcacatgggaaaggttaatcctttcccaccatgggaaaggtagattcaatgattagattaagt---gaacatattcttaacatgctctctcaacactag 20422235  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||| |||||||||||||||    
T  20422236 atttttcttcgcactatcttccaaca 20422261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 12640664 - 12640539
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| | |||| ||||| |||||||| | |||||||||||     
T  12640664 ttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagcgaagaacatatttttaacatgttctctcaacactaa 12640565  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||    
T  12640564 atttttcttcacactattttccaaca 12640539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 35427254 - 35427378
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| || | |||||||| ||||||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||    
T  35427254 ttcacatgggaaaggttaatccttttccgccatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctctaaacactag 35427352  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  35427353 atttttcttcacactatcttcgaaca 35427378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 277 - 393
Target Start/End: Complemental strand, 31842791 - 31842676
Alignment:
Q  277 gaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttctt 376  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||||||||| |||| ||||| |||||||| | |||||||||| ||||||||||    
T  31842791 gaaaggttaatcatttccaaccatgggaaagt-ggattcaatgattagattaagtgaagaacatattattaacatgttctctcaacactggatttttctt 31842693  T
Q  377 cacactatcttccaaca 393  Q
    |||||||||||||||||    
T  31842692 cacactatcttccaaca 31842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 278 - 393
Target Start/End: Complemental strand, 31877500 - 31877385
Alignment:
Q  278 aaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttc 377  Q
    |||| |||||| |||  |||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||    
T  31877500 aaagtttaatcctttttcactatgggaaagttggatttaatgattagattaagtgaagaacatatttttaacatgttatctcaacactagatttttcttc 31877401  T
Q  378 acactatcttccaaca 393  Q
    ||||||| ||||||||    
T  31877400 acactattttccaaca 31877385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 199308 - 199218
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgct 354  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  199308 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgct 199218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 303 - 393
Target Start/End: Complemental strand, 20076229 - 20076139
Alignment:
Q  303 gaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20076229 gaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaactctagatttttcttcacactatcttccaaca 20076139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 393
Target Start/End: Original strand, 40344509 - 40344636
Alignment:
Q  266 atttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacact 365  Q
    |||||| ||||||||| |||||| |||| ||  ||| |||||||||||| ||| ||||||||||||| |||| |||||||||||||| | ||| ||||||    
T  40344509 atttcatatgggaaagtttaatcctttctcatcatgagaaagttggattaaattattagattaagtgaagaacatattcttaacatgttctcttaacact 40344608  T
Q  366 agatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||    
T  40344609 agatttttcttcacactatcttccaaca 40344636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 354
Target Start/End: Original strand, 40847676 - 40847771
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgct 354  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40847676 aggtggcatttcacatggaaaaggttaatcctttcccaccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgct 40847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 26423767 - 26423881
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||||| |||| ||||||           ||||||||||||    
T  26423767 ttcacatgggaaaggttaatcctttcccaccatgaaaaagttggattcaatgattagattaagtgaagaacatattc-----------tctcaacactag 26423855  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  26423856 atttttcttcacactatcttccaaca 26423881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 48781526 - 48781613
Alignment:
Q  304 aaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  48781526 aaagttggattcaatgattagattaagtgatgaatatattcttaacatgctttttcaacactaaatttttcttcacactatcttccaa 48781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 3708787 - 3708906
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||||||||||      ||| |||||||||||||||||||||||||||||||||  |||| ||| ||||| |||| | ||||| ||||||    
T  3708787 ttcacatgggaaaggttaatc------caccatgggaaagttggattcaatgattagattaagtaaagaacatactcttatcatgttctctcagcactag 3708880  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||    
T  3708881 atttttcttcacactatctttcaaca 3708906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 6862651 - 6862780
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||| |||||||| |||| ||| | || || |||||||||||||||| |||||||||||||| |||| |||||||||||||||  | ||||||    
T  6862651 gcatttcacataggaaaggtcaatctttttctaccataggaaagttggattcaaagattagattaagtgaagaacatattcttaacatgcactttcaaca 6862750  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||| ||||||||| || ||||||| |||||    
T  6862751 ctaaatttttctttacgctatctttcaaca 6862780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 37566954 - 37567030
Alignment:
Q  311 gattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatctt 387  Q
    ||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37566954 gattcaatgattaaattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatctt 37567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 48090474 - 48090551
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattct 345  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  48090474 ttcacatgggaaaggttaatccattcccaccatgggaaagttggattcaatgattagattaagtgtagaacatattct 48090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 47321763 - 47321836
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaa 337  Q
    |||||||| |||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||||| ||||    
T  47321763 gcatttcatatgggaaaggttaatcctttatcactatggaaaagttggatttaatgattagattaagtgaagaa 47321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 35427882 - 35427837
Alignment:
Q  346 taacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  35427882 taacatgctctctcaacactagatttttcttcacactatcttccaa 35427837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 47328466 - 47328397
Alignment:
Q  276 ggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattct 345  Q
    ||||||||| ||| ||||| ||||||| |||||| |||||||| ||||||||||||| |||| |||||||    
T  47328466 ggaaaggttcatcttttcctactatggaaaagttagattcaataattagattaagtgaagaacatattct 47328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 18501736 - 18501781
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgg 302  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  18501736 ttaggtggcatttcacatgggaaaggttaatcctttcccaccatgg 18501781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 35428287 - 35428238
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagt 308  Q
    |||| |||||||| |||||||||||||||| |||||||| ||||||||||    
T  35428287 aggtggcatttcagatgggaaaggttaatcctttcccaccatgggaaagt 35428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 328
Target Start/End: Complemental strand, 35428238 - 35428208
Alignment:
Q  298 tatgggaaagttggattcaatgattagatta 328  Q
    |||||||||||||||||||||||||||||||    
T  35428238 tatgggaaagttggattcaatgattagatta 35428208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 3221465 - 3221424
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  3221465 ttcacatgggaaaggtgaatcctttcccacgatgggaaagtt 3221424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 52869455 - 52869496
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  52869455 ttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 52869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 7583875 - 7583746
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||    
T  7583875 gcatttcacatgggaaaggttaatcttttcccactatgggaaagttggattcaatgattagcttaagtgaagaacatattcttaacatgctctctcaaca 7583776  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||| ||||    
T  7583775 ctagatttttcttcacactatcttctaaca 7583746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 9224270 - 9224399
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  9224270 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 9224369  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||||||    
T  9224370 ctagatttttcttcacattatcttccaaca 9224399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 39477403 - 39477278
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  39477403 ttcatatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 39477304  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  39477303 atttttcttcacactatcttccaaca 39477278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 16571123 - 16571251
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||    
T  16571123 catttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctcaacac 16571222  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  16571223 tagatttttcttcacactatcttccaaca 16571251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 4387048 - 4386913
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||    
T  4387048 taggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctc 4386949  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    | ||||||||||||||||||||||||||||||||||    
T  4386948 ttaacactagatttttcttcacactatcttccaaca 4386913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 257 - 391
Target Start/End: Original strand, 28223785 - 28223919
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  28223785 ttaggtggcatttcacatgggaaaggttaatcctttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 28223884  T
Q  357 ctcaacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||| ||||||||||||||||    
T  28223885 ctcaacactagatttttcgtcacactatcttccaa 28223919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 10883295 - 10883420
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||    
T  10883295 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctcaacactag 10883394  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  10883395 atttttcttcacactatcttccaaca 10883420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 11256124 - 11256249
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  11256124 ttcacatgggaaaggttaatcatttctcaccatggtaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 11256223  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  11256224 atttttcttcacactatcttccaaca 11256249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 20244253 - 20244124
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  20244253 gcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 20244154  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||| ||||||||||||||||||||||||||    
T  20244153 ctaaatttttcttcacactatcttccaaca 20244124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 11256828 - 11256693
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatc 357  Q
    ||||| |||||| |||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| ||    
T  11256828 taggtggcattttacatggaaaaggttaatcattttccaccatgagaaagttggattcaatgattagattaagtgaagaatatattcttaacatgctctc 11256729  T
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  11256728 tcaacactagatttttcttcacactatcttccaaca 11256693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 3595254 - 3595379
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  3595254 ttcacatgggaaaggttaattctttcccaccatgggaaagttggattcaatgattagataaagtgaagaacatattcttaacatgctctctcaacactag 3595353  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  3595354 atttttcttcacactatcttccaaca 3595379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 28224466 - 28224341
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||     
T  28224466 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactaa 28224367  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  28224366 atttttcttcacactatcttccaaca 28224341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 8113382 - 8113255
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||| ||| |||| |||||||||||||||| ||||||||    
T  8113382 gcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcgatgattagattatgtgaagaacatattcttaacatgctctctcaaca 8113283  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||||||    
T  8113282 ctagatttttcttcacactatcttccaa 8113255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 6849296 - 6849421
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||| | ||||||||||||    
T  6849296 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgttctctcaacactag 6849395  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||| |||||    
T  6849396 atttttcttcacactatctttcaaca 6849421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 16887591 - 16887716
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||    
T  16887591 ttcacatgggaaaggttaatcctttcccaccatgggatagttggattcaatgattagattaagtgaagaacatattcttaacatgttctctgaacactag 16887690  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  16887691 atttttcttcacactatcttccaaca 16887716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 7716670 - 7716804
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |    
T  7716670 aggtggcatttcacatgggaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctcttt 7716769  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||| | |||| |||||    
T  7716770 caacactagatttttcttcacagtttctttcaaca 7716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 259 - 391
Target Start/End: Complemental strand, 6849629 - 6849497
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| |||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| |||    
T  6849629 aggtggcattttacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatttttaacatgctctct 6849530  T
Q  359 caacactagatttttcttcacactatcttccaa 391  Q
     ||||||||||||||||||||||||| ||||||    
T  6849529 taacactagatttttcttcacactattttccaa 6849497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 7583140 - 7583263
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||| ||||||||||||| |||||||| ||| |||| ||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||    
T  7583140 ttcacatcggaaaggttaatcctttcccaccatgagaaaattggattcaatgattagattaggtgaagaacatattcttaacatgctctctcaacactag 7583239  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  7583240 atttttcttcacactatcttccaa 7583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 39476534 - 39476648
Alignment:
Q  279 aaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttca 378  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||    
T  39476534 aaggttaatcctttcccactatgggaaagtttaattcaatgattagattaagtgaagaatatattcttaacatgatctctcaacactagatttttcttca 39476633  T
Q  379 cactatcttccaaca 393  Q
    |||||||||||||||    
T  39476634 cactatcttccaaca 39476648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 3595976 - 3595848
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||| ||||||| |||  ||  |||| ||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||    
T  3595976 catttcacatgggaaatgttaatcctttttcatcatggaaaagttggattcaatgattagattaagtgaaaaacatattcttaacatgctctctcaacac 3595877  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  3595876 tagatttttcttcacactatcttccaaca 3595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 255 - 393
Target Start/End: Original strand, 30161928 - 30162066
Alignment:
Q  255 aattaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgct 354  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||  |||| ||||||||||||||||||||||||||||| |||| ||||||||||||| ||    
T  30161928 aattaggtggcatttcacgtgggaaaagttaatcctttcccatcatggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatact 30162027  T
Q  355 atctcaacactagatttttcttcacactatcttccaaca 393  Q
     | |||||| |||||||||||||||| ||||||||||||    
T  30162028 ctttcaacattagatttttcttcacattatcttccaaca 30162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 7717362 - 7717238
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||| ||| |||||||||||| |||||||||||| |||||||| |||| |||||||||||||| | ||||||||||||    
T  7717362 ttcacatgggaaaggttaatcctttctcaccatgggaaagttg-attcaatgattatattaagtgaagaacatattcttaacatgttctctcaacactag 7717264  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  7717263 atttttcttcacactatcttctaaca 7717238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 8963508 - 8963637
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| | |  |||||||||||||||||||||||||||||||||| | || ||||| |||||||||| ||||||||    
T  8963508 gcatttcacatgggaaaggttaatccttttctatcatgggaaagttggattcaatgattagattaagtgaaaaacatatttttaacatgctctctcaaca 8963607  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||| ||| ||||||||||||    
T  8963608 ctagatttttctttacattatcttccaaca 8963637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 16571804 - 16571679
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||| |||    
T  16571804 ttcacatgggaaaggttaatcctttcccatcatgggaaaattggattcaatgattagatcaagtgaagaacatattcttaacatgctctctcaacattag 16571705  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||| |||||| |||||||||    
T  16571704 atttttcttaacactaccttccaaca 16571679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 33847877 - 33848006
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||||||||  |||| ||| |||| ||||||||| |||||||||  ||||||||||||| |||| |||||||||||||||| ||||||||    
T  33847877 gcatttcacatgggaaaggccaatccttttccaccatgggaaagatggattcaacaattagattaagtgaagaacatattcttaacatgctctctcaaca 33847976  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||| ||||||||||||||||||||||||||    
T  33847977 ctatatttttcttcacactatcttccaaca 33848006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 290 - 393
Target Start/End: Original strand, 20243583 - 20243686
Alignment:
Q  290 tttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttcc 389  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  20243583 tttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattcttaacatgttctctcaacattagatttttcttcacactatcttcc 20243682  T
Q  390 aaca 393  Q
    ||||    
T  20243683 aaca 20243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 8112688 - 8112810
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||| |||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||   ||| ||||| |||||||| | ||||||||||||    
T  8112688 ttcacatgagaaatgttaatcctttctcaccatgggaaagttggattcaatgattagattaagt---gaacatatttttaacatgttctctcaacactag 8112784  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  8112785 atttttcttcacactatcttccaaca 8112810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 16903170 - 16903045
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    ||||| |||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||| | || ||||| |||||||||| | |||||||    
T  16903170 cattttacatgggaaaggttaatccttttccaccatgagaaagttggattcaatgattagattaagtgaataacatatttttaacatgctctttcaacac 16903071  T
Q  365 tagatttttcttcacactatcttccaa 391  Q
    |||| ||||||||||||||||||||||    
T  16903070 taga-ttttcttcacactatcttccaa 16903045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 393
Target Start/End: Original strand, 467139 - 467238
Alignment:
Q  294 ccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  467139 ccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattcttaacatggtctctcaacactagatttttcttcacactatcatccaaca 467238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 17918032 - 17918154
Alignment:
Q  271 acatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatt 370  Q
    ||||| |||||||||||| |||  |  ||||| |||||| |||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||    
T  17918032 acatgagaaaggttaatcctttttctttatggaaaagttagattcaatgattagattaagtgaagaatatattcttaacatgttctctcaacactagatt 17918131  T
Q  371 tttcttcacactatcttccaaca 393  Q
    ||| ||||||||||||| |||||    
T  17918132 tttattcacactatctttcaaca 17918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 393
Target Start/End: Complemental strand, 17918720 - 17918638
Alignment:
Q  311 gattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17918720 gattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 17918638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 393
Target Start/End: Complemental strand, 40166920 - 40166802
Alignment:
Q  269 tcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactaga 368  Q
    |||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||  |||| ||||| ||||||||      ||||||||||    
T  40166920 tcacataggaaaggttaatcctttcccaccatgggaaaattggattcaatgattagattaagtcaagaacatatttttaacatg------caacactaga 40166827  T
Q  369 tttttcttcacactatcttccaaca 393  Q
    ||||| |||||||||||||||||||    
T  40166826 ttttttttcacactatcttccaaca 40166802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 366
Target Start/End: Original strand, 40165878 - 40165979
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||   |||||||| |||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||||    
T  40165878 catttcacatgggaaagaccaatcattttccaccatgggaaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacac 40165977  T
Q  365 ta 366  Q
    ||    
T  40165978 ta 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 393
Target Start/End: Complemental strand, 467412 - 467294
Alignment:
Q  275 gggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttc 374  Q
    |||||||||||||||||| ||||  ||  ||||||| ||||||| |||| |||||||| |||| |||||||||||||| | |||||| | ||||||||||    
T  467412 gggaaaggttaatcattttccaccgtgaaaaagttgaattcaataattaaattaagtgaagaacatattcttaacatgttctctcaatattagatttttc 467313  T
Q  375 ttcacactatcttccaaca 393  Q
    |||| |||||||| |||||    
T  467312 ttcaaactatctttcaaca 467294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 4386363 - 4386422
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagatt 327  Q
    ||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||    
T  4386363 ttcacatgggaaaggttaatactttcccaccataggaaagttggattcaatgattagatt 4386422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 12206793 - 12206839
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttgg 311  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||    
T  12206793 catttcacatgggaaaggttaatcctttcccaccatgagaaagttgg 12206839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 12207384 - 12207349
Alignment:
Q  358 tcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12207384 tcaacactagatttttcttcacattatcttccaaca 12207349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 18949907 - 18949957
Alignment:
Q  258 taggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagt 308  Q
    ||||| ||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  18949907 taggtggcatttcacatgggaaaagttaatcttttctcaccatgggaaagt 18949957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 33848542 - 33848496
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttgg 311  Q
    ||||||||||||||||||| |||| |||||||  |||||||||||||    
T  33848542 catttcacatgggaaaggtcaatcttttcccatcatgggaaagttgg 33848496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 43743883 - 43743842
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaa 306  Q
    ||||||||||||||||||| |||| |||||||| ||||||||    
T  43743883 catttcacatgggaaaggtgaatcctttcccaccatgggaaa 43743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 11263 - 11398
Alignment:
Q  257 ttaggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctat 356  Q
    |||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  11263 ttaggtggcatttcacatgggaaaggttaatcttttcc-accatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctct 11361  T
Q  357 ctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||||||    
T  11362 ctcaacactagatttttcttcacactatcttccaaca 11398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 3957504 - 3957633
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| ||| | ||||||||    
T  3957504 gcatttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaatatgttctctcaaca 3957603  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  3957604 ctagatttttcttcacactatcttccaaca 3957633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 28076050 - 28075922
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||    
T  28076050 catttcacatggaaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtgaaaaatatattcttaacatgctctctcaacac 28075951  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  28075950 tagatttttcttcacactatcttccaaca 28075922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 4929588 - 4929459
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||    
T  4929588 gcatttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaatatatttttaacatgctctctcaaca 4929489  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||| |||||||||| ||||    
T  4929488 ctagatttttcttcgcactatcttcaaaca 4929459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 26687508 - 26687633
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||    
T  26687508 ttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattag 26687607  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  26687608 atttttcttcacactatcttccaaca 26687633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 26957239 - 26957364
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||| | || ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||    
T  26957239 ttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattag 26957338  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  26957339 atttttcttcacactatcttccaaca 26957364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 264 - 391
Target Start/End: Original strand, 33430047 - 33430173
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||| ||||||||||| ||||| || |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  33430047 gcatttcacatggaaaaggttaatcctttcctaccatgg-aaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaaca 33430145  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    |||||||||||||| |||||||||||||    
T  33430146 ctagatttttcttcgcactatcttccaa 33430173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 3739741 - 3739616
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||| |||||  |||||| ||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  3739741 ttcacataggaaaacttaatcctttcctactatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 3739642  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||    
T  3739641 atttttcttcacactattttccaaca 3739616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 4928879 - 4929004
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||| ||||||| |||||||| || | ||||||||||| ||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  4928879 ttcacatgggaaaagttaatcctttcccaccatagaaaagttggatttaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 4928978  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  4928979 atttttcttcacactatcttccaaca 4929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 8813765 - 8813638
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||| |||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||| |||    
T  8813765 gcatttcatatgggaaaggttaatccttttccatcatgggaaagttggattcaatgattagattaagtaaagaacatattcttaacatgctctctctaca 8813666  T
Q  364 ctagatttttcttcacactatcttccaa 391  Q
    |||||||| |||||||||||||||||||    
T  8813665 ctagatttgtcttcacactatcttccaa 8813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 265 - 383
Target Start/End: Complemental strand, 5324484 - 5324366
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||  ||||  || ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  5324484 catttcacatgggaaaggttaattctttcataccatgagaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 5324385  T
Q  365 tagatttttcttcacacta 383  Q
    || ||||||||||||||||    
T  5324384 taaatttttcttcacacta 5324366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 42408612 - 42408518
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42408612 atggaaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 42408518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 3958212 - 3958087
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||  |  |||||||| |||||||| ||||||||||||| |||| ||||| ||||||| || |||||||||||     
T  3958212 ttcacatgggaaaggttaatcctttcccatcaatggaaagtttgattcaataattagattaagtgaagaacatatttttaacatactctctcaacactaa 3958113  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  3958112 atttttcttcacactatcttccaaca 3958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 3739039 - 3739133
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||| | || ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  3739039 atgggaaagttggattcaatgattagattaagtgaaaaatatattcttaacatactctctcaacactagatttttcttcacaatatcttccaaca 3739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 42408011 - 42408125
Alignment:
Q  279 aaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttca 378  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| || |||| |||||||||||||| | |||||| | ||||||||||||||    
T  42408011 aaggttaatcttttcccactatgggaaaattggattcaatgattagattaaatgaagaacatattcttaacatgttctctcaatattagatttttcttca 42408110  T
Q  379 cactatcttccaaca 393  Q
     |||||||| |||||    
T  42408111 aactatctttcaaca 42408125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 13738065 - 13738192
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||||| ||   ||||||| | ||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||| | | ||||||    
T  13738065 gcatttcacatgggaa-ggcccatcattttctactatgggaaagttggattcaatgattggattaagtgaagaacatattctttacatg-tctttcaaca 13738162  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  13738163 ctagatttttcttcacactatcttccaaca 13738192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 21770002 - 21770131
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttg----gattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||| |||||||||||||||| ||| |||| ||||||||||||    |||||||||||||||||||||| |||| |||||||||||||| | ||||||||    
T  21770002 ttcatatgggaaaggttaatccttttccaccatgggaaagttggttggattcaatgattagattaagtgaagaacatattcttaacatgttctctcaaca 21770101  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
     || ||||||||||||||||| ||||||||    
T  21770102 ttaaatttttcttcacactatattccaaca 21770131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 26688136 - 26688009
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| |||||||| |         | ||||||||||||| |||||||| |||| |||||||||||||||| |||    
T  26688136 aggtggcatttcacatgggaaaggttaatcctttcccaccac--------tagattcaatgattatattaagtgaagaacatattcttaacatgctctct 26688045  T
Q  359 caacactagat-ttttcttcacactatcttccaaca 393  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26688044 caacactagattttttcttcacactatcttccaaca 26688009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 26957867 - 26957740
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| |||||||| |         | ||||||||||||| |||||||| |||| |||||||||||||||| |||    
T  26957867 aggtggcatttcacatgggaaaggttaatcctttcccaccac--------tagattcaatgattatattaagtgaagaacatattcttaacatgctctct 26957776  T
Q  359 caacactagat-ttttcttcacactatcttccaaca 393  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26957775 caacactagattttttcttcacactatcttccaaca 26957740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 8813134 - 8813188
Alignment:
Q  339 atattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  8813134 atattcttaacatgttctctcaacactatatttttcttcacactatcttccaaca 8813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 5324312 - 5324368
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattag 324  Q
    |||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||    
T  5324312 ttcacatgggaaagcttaatcctttcctatcatgggaaagttggattcaatgattag 5324368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 8813085 - 8813135
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaat 318  Q
    |||| |||||||||||||||| | |||||| ||||||||||||||||||||    
T  8813085 ttcatatgggaaaggttaatcctctcccaccatgggaaagttggattcaat 8813135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 39149513 - 39149468
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||    
T  39149513 gcatttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 39149468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 25075074 - 25075034
Alignment:
Q  269 tcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  25075074 tcacatgggaaaggttaatcctttcccaccatgggaaagtt 25075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 25133043 - 25133003
Alignment:
Q  269 tcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  25133043 tcacatgggaaaggttaatcctttcccaccatgggaaagtt 25133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 27817086 - 27816957
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||    
T  27817086 gcatttcacatgggtaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattcctaacatgctctctcaaca 27816987  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||||||    
T  27816986 ctagatttttcttcacactatcttccaaca 27816957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 27797817 - 27797689
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  27797817 catttcacatgggaaaggttaatccttttccactatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 27797718  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| ||||||||||||    
T  27797717 tagatttttcttcacaatatcttccaaca 27797689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 259 - 393
Target Start/End: Original strand, 1403039 - 1403173
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |    
T  1403039 aggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctcttt 1403138  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    ||| ||||||||||||||||||||||||| |||||    
T  1403139 caatactagatttttcttcacactatctttcaaca 1403173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 43368913 - 43368788
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  43368913 ttcacatgggaaaggttaattctttcccaccatgggaaagttgtattcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 43368814  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  43368813 atttttcttcacactatcttccaaca 43368788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 42838942 - 42839070
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  42838942 catttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattcttaacatgctctctcaacac 42839041  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| ||||||||||||    
T  42839042 tagatttttcttcacaatatcttccaaca 42839070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 274 - 393
Target Start/End: Complemental strand, 42839620 - 42839501
Alignment:
Q  274 tgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagattttt 373  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||    
T  42839620 tgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactagattttt 42839521  T
Q  374 cttcacactatcttccaaca 393  Q
    ||||||||||||||||||||    
T  42839520 cttcacactatcttccaaca 42839501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 49533751 - 49533874
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||| || |||||||||| |||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  49533751 ttcacatagggaaggttaatcctttcccaccacgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacactag 49533850  T
Q  368 atttttcttcacactatcttccaa 391  Q
    ||||||||||||||||||||||||    
T  49533851 atttttcttcacactatcttccaa 49533874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 42840388 - 42840266
Alignment:
Q  271 acatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatt 370  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||||  | |||||||||||||||    
T  42840388 acatgggaaaggttaatcattttccactatgggaaagttgaattcaatgattagattaagtgaagaacatatttttaacataatctctcaacactagatt 42840289  T
Q  371 tttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||    
T  42840288 tttcttcacactatcttccaaca 42840266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 49534483 - 49534349
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||  | || ||||||||| |||||| |||    
T  49534483 aggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagttaaaaacatattcttatcatgctctct 49534384  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||| |||||||||||||||||||||||||    
T  49534383 caacactaggtttttcttcacactatcttccaaca 49534349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 27797125 - 27797250
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||| ||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  27797125 ttcacatggaaaaggttaatcctttcccaccatgggaaggttgaattcaatgattagattaagtgaagaacatattcttaacatgatctctcaacactag 27797224  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  27797225 atttttcttcacactatcttccaaca 27797250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 6288286 - 6288157
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| |||| ||| ||||  |||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||    
T  6288286 gcatttcacatgggaaaggttaatcctttctcaccatggagaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctttcaaca 6288187  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||| |||||||||| |||||||||||||||    
T  6288186 ctaaatttttcttcccactatcttccaaca 6288157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 7219725 - 7219601
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||    
T  7219725 ttcacatgggaaaggttaatcctttcccatcatgggaaa-ttggattcaatgattagattaagtgaagaacatattcttaacatgttctctaaacactag 7219627  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||||||||    
T  7219626 atttttcttcacactatcttccaaca 7219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 8560160 - 8560289
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    ||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||| |||||||||||||| |||| |||||||||||||||| | ||||||    
T  8560160 gcatttcacatgggaaaggttaatccttttccaccatgggaatgttggattcaaagattagattaagtgaagaacatattcttaacatgctctttcaaca 8560259  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||| |||||||| |||||    
T  8560260 ctagatttttcttcatactatctttcaaca 8560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 48369487 - 48369615
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    ||||||||||||||||    |||||||| ||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||||    
T  48369487 catttcacatgggaaaaaccaatcattttccactataggaaagttggattcaatgattggattaagtgaagaacatattcttaacatgctctttcaacac 48369586  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||    
T  48369587 tagatttttcttcacactatcttccaaca 48369615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 52859866 - 52859739
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||    
T  52859866 ttcacatgggaaaggttaatcctttccaaccatgggaaagttgaattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacaccag 52859767  T
Q  368 atttttcttc--acactatcttccaaca 393  Q
    ||||||||||  ||||||||||||||||    
T  52859766 atttttcttcacacactatcttccaaca 52859739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 1403765 - 1403641
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  1403765 ttcacataggaaaggttaatcctttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactag 1403667  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||| ||||    
T  1403666 atttttcttcacactattttctaaca 1403641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 393
Target Start/End: Complemental strand, 8560820 - 8560696
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||    
T  8560820 ttcacatgggaaaggttaatcctttcccaccatggaaaagttg-attcaatgattagattaagtgaagaacatattcttaacatgttctttcaacactag 8560722  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| ||||    
T  8560721 atttttcttcacactatcttctaaca 8560696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 273 - 393
Target Start/End: Original strand, 43368203 - 43368323
Alignment:
Q  273 atgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttt 372  Q
    |||||||||||||||| |||||||| ||||||| ||| ||||||||||||| |||||||| |||| |||||||||||||| | ||| |||||||||||||    
T  43368203 atgggaaaggttaatcctttcccaccatgggaatgttagattcaatgattaaattaagtgaagaacatattcttaacatgttctcttaacactagatttt 43368302  T
Q  373 tcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||    
T  43368303 tcttcacactatcttccaaca 43368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 273 - 393
Target Start/End: Complemental strand, 51248556 - 51248436
Alignment:
Q  273 atgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttt 372  Q
    |||||||||||||||  |||||||| |||| |||||| |||||||| ||||||||||||| |||| ||||||||||||| || |||||||||||||||||    
T  51248556 atgggaaaggttaattttttcccaccatggaaaagtttgattcaataattagattaagtgaagaacatattcttaacatactctctcaacactagatttt 51248457  T
Q  373 tcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||    
T  51248456 tcttcacactatcttccaaca 51248436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 48844009 - 48843915
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  48844009 atgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctctctcaacattagatttttcttcacactatcttccaaca 48843915  T

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Target: chr1; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 42839709 - 42839833
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||||||| ||||||||||| || |||||||| |||||||||| |||| |||||||||||||||| |||||||||||     
T  42839709 ttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacactaa 42839808  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||| |||||| ||||||||||||    
T  42839809 attttt-ttcacaatatcttccaaca 42839833  T

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Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 48843588 - 48843713
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    ||||||||||||||||||||| |||| ||| || |||||||||||||||||||||| |||||||| | || |||||||||||||| | ||||||||||||    
T  48843588 ttcacatgggaaaggttaatcttttcacaccataggaaagttggattcaatgattatattaagtgaataacatattcttaacatgttctctcaacactag 48843687  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    |||||||||||||||| || ||||||    
T  48843688 atttttcttcacactaactaccaaca 48843713  T

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Target: chr1; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 7219048 - 7219139
Alignment:
Q  300 tgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7219048 tgggaaagttggattcaatgattagattaaatgaagaatatattcttaacatgctttctcaacactagatttttcttcacactatcttccaa 7219139  T

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Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 51247867 - 51247961
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51247867 atggaaaaattggattcaatgattagattaagtgaagaatatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 51247961  T

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Target: chr1; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 41563833 - 41563745
Alignment:
Q  305 aagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41563833 aagttggattcaattattagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacactatcttccaaca 41563745  T

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Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 7782773 - 7782644
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaaca 363  Q
    |||||||||||||||||||  |||| ||||| || |||||||||||||||||||||||| ||| ||||| |||| ||||||||| |||||| | ||||||    
T  7782773 gcatttcacatgggaaaggccaatcctttcctaccatgggaaagttggattcaatgattggatcaagtgaagaacatattcttatcatgctctttcaaca 7782674  T
Q  364 ctagatttttcttcacactatcttccaaca 393  Q
     |||||||||||||||||||| | ||||||    
T  7782673 ttagatttttcttcacactatataccaaca 7782644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 41563187 - 41563306
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||| |||||||| ||||||  ||| | || |||||||||||||||||||| |||||||||| || ||||  ||||||||||||||| ||||||||||||    
T  41563187 ttcatatgggaaatgttaattcttttctaccatgggaaagttggattcaattattagattaaatgaagaacgtattcttaacatgctctctcaacactag 41563286  T
Q  368 atttttcttcacactatctt 387  Q
    ||||||||||||||||||||    
T  41563287 atttttcttcacactatctt 41563306  T

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Target: chr1; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 393
Target Start/End: Complemental strand, 27934341 - 27934248
Alignment:
Q  299 atgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||| |||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  27934341 atgggaaagttggat-caatgattagattaagagaagaacatattcttaacatgctctctcaacactagatttttcttcgcactatcttccaaca 27934248  T

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Target: chr1; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 6287672 - 6287753
Alignment:
Q  312 attcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  6287672 attcaatgattagattaagtgaagaacatattcttaacatgttctctcaacactagatttttcttcacactatcttccaaca 6287753  T

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Target: chr1; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 37725423 - 37725510
Alignment:
Q  304 aaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaa 391  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  37725423 aaagttggattcaatcattagattaagtgaagaacatattcttaacatactctctcaacactagatttttcttcacactattttccaa 37725510  T

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Target: chr1; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 52859189 - 52859282
Alignment:
Q  300 tgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactagatttttcttcacactatcttccaaca 393  Q
    |||||||||| ||||||||||||||||||| || | || |||||||||||||||| ||||| || |||||||||||| ||||||||||||||||    
T  52859189 tgggaaagttagattcaatgattagattaaatgaataacatattcttaacatgctctctcatcattagatttttctttacactatcttccaaca 52859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 29148939 - 29148989
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||| |||||| ||| |||||||||||||| |||||||| |||||||||||    
T  29148939 aggtggcatttaacacgggaaaggttaatcctttcccaccatgggaaagtt 29148989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 37725713 - 37725672
Alignment:
Q  303 gaaagttggattcaatgattagattaagtgcagaagatattc 344  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  37725713 gaaaattggattcaatgattagattaagtgaagaatatattc 37725672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 15320 - 15186
Alignment:
Q  259 aggttgcatttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatct 358  Q
    |||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |    
T  15320 aggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattcttaacatgctcttt 15221  T
Q  359 caacactagatttttcttcacactatcttccaaca 393  Q
    ||| ||||||||||||||||||||||||| |||||    
T  15220 caatactagatttttcttcacactatctttcaaca 15186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 1493 - 1618
Alignment:
Q  268 ttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacactag 367  Q
    |||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| | || ||||||||| |||||| ||||||||||||    
T  1493 ttcacatgggaaagcttaatcatttcgcaccatggaaaagttggattcaatgattagattaagtgaataacatattcttagcatgctctctcaacactag 1592  T
Q  368 atttttcttcacactatcttccaaca 393  Q
    ||||||||||||||||| ||||||||    
T  1593 atttttcttcacactattttccaaca 1618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 11865 - 11738
Alignment:
Q  265 catttcacatgggaaaggttaatcatttcccactatgggaaagttggattcaatgattagattaagtgcagaagatattcttaacatgctatctcaacac 364  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||| || |||||||| |||||||||| |||| |||||||||||||||| |||||||||    
T  11865 catttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattcttaacatgctctctcaacac 11766  T
Q  365 tagatttttcttcacactatcttccaaca 393  Q
    || |||||| |||||| ||||||||||||    
T  11765 taaattttt-ttcacaatatcttccaaca 11738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 90619 - 90664
Alignment:
Q  264 gcatttcacatgggaaaggttaatcatttcccactatgggaaagtt 309  Q
    |||||||||||||||||||| |||||||| |||| || ||||||||    
T  90619 gcatttcacatgggaaaggtgaatcattttccaccataggaaagtt 90664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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