View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21628_low_11 (Length: 350)

Name: NF21628_low_11
Description: NF21628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21628_low_11
NF21628_low_11
[»] chr8 (35 HSPs)
chr8 (61-335)||(22943051-22943324)
chr8 (15-90)||(4948675-4948748)
chr8 (15-90)||(31514896-31514967)
chr8 (15-57)||(20873092-20873134)
chr8 (15-57)||(24613543-24613585)
chr8 (15-90)||(25566864-25566943)
chr8 (15-57)||(40332214-40332256)
chr8 (19-59)||(30271247-30271287)
chr8 (14-53)||(30077385-30077424)
chr8 (15-57)||(18407742-18407784)
chr8 (15-57)||(31557019-31557061)
chr8 (15-57)||(36450748-36450790)
chr8 (15-60)||(8342995-8343040)
chr8 (15-60)||(8343339-8343384)
chr8 (18-90)||(11833888-11833963)
chr8 (20-61)||(22204669-22204710)
chr8 (18-51)||(24669459-24669492)
chr8 (15-51)||(2572056-2572092)
chr8 (18-54)||(22596020-22596056)
chr8 (15-57)||(3025574-3025616)
chr8 (15-53)||(4786336-4786374)
chr8 (16-57)||(5813616-5813657)
chr8 (15-56)||(13844591-13844632)
chr8 (20-53)||(15023255-15023288)
chr8 (18-55)||(18170478-18170515)
chr8 (18-55)||(18634046-18634083)
chr8 (61-90)||(31109464-31109493)
chr8 (15-56)||(34897108-34897149)
chr8 (58-90)||(3025632-3025664)
chr8 (15-51)||(8847279-8847315)
chr8 (15-51)||(11927086-11927122)
chr8 (15-51)||(15816129-15816165)
chr8 (15-51)||(22651999-22652035)
chr8 (15-51)||(26902175-26902211)
chr8 (17-57)||(33405378-33405418)
[»] chr1 (57 HSPs)
chr1 (20-90)||(35702548-35702619)
chr1 (15-90)||(22881573-22881652)
chr1 (19-90)||(24334670-24334737)
chr1 (15-90)||(13436481-13436556)
chr1 (15-57)||(51410048-51410090)
chr1 (15-56)||(18337352-18337393)
chr1 (18-58)||(19058849-19058889)
chr1 (15-57)||(1815280-1815322)
chr1 (15-57)||(22515881-22515923)
chr1 (15-57)||(38078655-38078697)
chr1 (15-57)||(40258927-40258969)
chr1 (18-59)||(41877462-41877503)
chr1 (15-51)||(24577186-24577222)
chr1 (15-90)||(35919232-35919312)
chr1 (15-55)||(42359445-42359485)
chr1 (15-51)||(47989520-47989556)
chr1 (15-58)||(21620978-21621021)
chr1 (17-90)||(2218264-2218341)
chr1 (15-57)||(31672889-31672931)
chr1 (15-57)||(46348377-46348419)
chr1 (15-61)||(52903272-52903318)
chr1 (18-51)||(6612171-6612204)
chr1 (15-56)||(30749863-30749904)
chr1 (15-56)||(30771314-30771355)
chr1 (15-51)||(113322-113358)
chr1 (15-51)||(1486709-1486745)
chr1 (15-51)||(1704992-1705028)
chr1 (15-90)||(2288131-2288203)
chr1 (15-51)||(5944306-5944342)
chr1 (15-51)||(6332693-6332729)
chr1 (15-51)||(31694710-31694746)
chr1 (15-58)||(1864873-1864916)
chr1 (18-49)||(21378604-21378635)
chr1 (15-50)||(28273089-28273124)
chr1 (15-46)||(31015066-31015097)
chr1 (22-57)||(37598861-37598896)
chr1 (15-90)||(17705552-17705622)
chr1 (18-56)||(18190103-18190141)
chr1 (15-57)||(36878484-36878526)
chr1 (18-51)||(5376500-5376533)
chr1 (61-90)||(16297227-16297256)
chr1 (61-90)||(21365998-21366027)
chr1 (61-90)||(22515833-22515862)
chr1 (61-90)||(22947814-22947843)
chr1 (18-51)||(30173762-30173795)
chr1 (61-90)||(37598915-37598944)
chr1 (15-56)||(40181894-40181935)
chr1 (61-90)||(42359395-42359424)
chr1 (18-90)||(46940754-46940826)
chr1 (61-90)||(47989592-47989621)
chr1 (18-90)||(3490353-3490423)
chr1 (15-51)||(15449232-15449268)
chr1 (15-47)||(18471323-18471355)
chr1 (15-51)||(25272505-25272541)
chr1 (15-51)||(28663631-28663667)
chr1 (15-51)||(34371736-34371772)
chr1 (15-51)||(44482253-44482289)
[»] chr5 (43 HSPs)
chr5 (15-84)||(15884011-15884084)
chr5 (15-90)||(6247645-6247723)
chr5 (15-56)||(21191051-21191092)
chr5 (18-90)||(24906258-24906334)
chr5 (15-57)||(21576739-21576781)
chr5 (16-90)||(10298593-10298663)
chr5 (15-56)||(33178048-33178089)
chr5 (18-90)||(6326259-6326330)
chr5 (16-50)||(21351906-21351940)
chr5 (15-57)||(28588668-28588710)
chr5 (15-57)||(43564904-43564946)
chr5 (15-83)||(13287366-13287435)
chr5 (18-51)||(21542056-21542089)
chr5 (15-56)||(42893383-42893424)
chr5 (15-47)||(7218271-7218303)
chr5 (18-54)||(8420053-8420089)
chr5 (15-51)||(39698564-39698600)
chr5 (43-90)||(41995531-41995577)
chr5 (18-56)||(2548413-2548451)
chr5 (15-57)||(14422925-14422967)
chr5 (15-57)||(30502382-30502424)
chr5 (15-57)||(30542725-30542767)
chr5 (15-89)||(32426832-32426905)
chr5 (61-90)||(4105343-4105372)
chr5 (61-90)||(14873606-14873635)
chr5 (15-52)||(15382502-15382539)
chr5 (61-90)||(17123131-17123160)
chr5 (61-90)||(21191002-21191031)
chr5 (18-51)||(21522776-21522809)
chr5 (18-51)||(21533342-21533375)
chr5 (61-90)||(21576691-21576720)
chr5 (61-90)||(22423770-22423799)
chr5 (61-90)||(35017127-35017156)
chr5 (61-90)||(39268544-39268573)
chr5 (61-90)||(39698636-39698665)
chr5 (18-51)||(41633761-41633794)
chr5 (61-90)||(43001889-43001918)
chr5 (15-43)||(4105282-4105310)
chr5 (15-51)||(7677728-7677764)
chr5 (15-51)||(12199953-12199989)
chr5 (15-51)||(19579724-19579760)
chr5 (15-51)||(31084346-31084382)
chr5 (15-51)||(37328844-37328880)
[»] chr4 (43 HSPs)
chr4 (15-81)||(6879435-6879501)
chr4 (15-90)||(42640552-42640637)
chr4 (15-57)||(12797332-12797374)
chr4 (29-91)||(30094066-30094127)
chr4 (19-57)||(16073421-16073459)
chr4 (15-57)||(23292980-23293022)
chr4 (15-57)||(28964242-28964284)
chr4 (15-57)||(29205467-29205509)
chr4 (18-90)||(30298973-30299042)
chr4 (18-90)||(30327841-30327910)
chr4 (15-57)||(49431049-49431091)
chr4 (15-57)||(54580017-54580059)
chr4 (18-55)||(21945529-21945566)
chr4 (17-60)||(482229-482272)
chr4 (15-90)||(22440563-22440636)
chr4 (15-57)||(4157172-4157214)
chr4 (15-57)||(4157459-4157501)
chr4 (15-57)||(8423712-8423754)
chr4 (15-51)||(11596352-11596388)
chr4 (15-50)||(715608-715643)
chr4 (15-50)||(752934-752969)
chr4 (18-57)||(2361969-2362008)
chr4 (15-50)||(28000743-28000778)
chr4 (15-49)||(6485613-6485647)
chr4 (15-57)||(12895268-12895310)
chr4 (27-57)||(34306798-34306828)
chr4 (15-57)||(35157979-35158021)
chr4 (15-57)||(40179630-40179672)
chr4 (61-90)||(715551-715580)
chr4 (61-90)||(752877-752906)
chr4 (61-90)||(3064874-3064903)
chr4 (61-90)||(4383450-4383479)
chr4 (61-90)||(5775310-5775339)
chr4 (61-90)||(23292932-23292961)
chr4 (61-90)||(28084608-28084637)
chr4 (19-51)||(3947766-3947798)
chr4 (15-51)||(4383390-4383426)
chr4 (15-51)||(12895116-12895152)
chr4 (19-90)||(17425353-17425421)
chr4 (15-51)||(19482691-19482727)
chr4 (15-51)||(28084545-28084581)
chr4 (15-51)||(30982878-30982914)
chr4 (15-43)||(40481659-40481687)
[»] chr7 (41 HSPs)
chr7 (18-90)||(28155596-28155667)
chr7 (15-90)||(19213826-19213906)
chr7 (18-57)||(21880178-21880217)
chr7 (15-57)||(25481925-25481967)
chr7 (15-51)||(18039022-18039058)
chr7 (15-51)||(21560526-21560562)
chr7 (15-51)||(24339665-24339701)
chr7 (15-90)||(35861987-35862064)
chr7 (40-90)||(11272536-11272586)
chr7 (15-57)||(15680832-15680874)
chr7 (15-86)||(3991347-3991422)
chr7 (18-51)||(27945067-27945100)
chr7 (16-57)||(33994236-33994277)
chr7 (15-51)||(2334273-2334309)
chr7 (15-51)||(5409836-5409872)
chr7 (15-51)||(9408334-9408370)
chr7 (15-51)||(9778523-9778559)
chr7 (15-47)||(26033465-26033497)
chr7 (15-51)||(32094020-32094056)
chr7 (21-56)||(7197292-7197327)
chr7 (15-50)||(7438729-7438764)
chr7 (18-57)||(8234172-8234211)
chr7 (15-58)||(11061069-11061112)
chr7 (20-51)||(11272586-11272617)
chr7 (15-89)||(18215144-18215222)
chr7 (18-57)||(25956471-25956510)
chr7 (15-57)||(18213027-18213069)
chr7 (15-57)||(21864831-21864873)
chr7 (15-57)||(26733327-26733369)
chr7 (15-57)||(39138467-39138509)
chr7 (23-90)||(40287308-40287385)
chr7 (16-57)||(1401049-1401090)
chr7 (61-90)||(5409777-5409806)
chr7 (18-51)||(13770717-13770750)
chr7 (15-56)||(20549814-20549855)
chr7 (22-51)||(25822685-25822714)
chr7 (61-90)||(29763135-29763164)
chr7 (18-90)||(30813838-30813910)
chr7 (15-51)||(19992024-19992060)
chr7 (15-51)||(22602710-22602746)
chr7 (15-51)||(43027469-43027505)
[»] chr3 (48 HSPs)
chr3 (15-58)||(25775532-25775575)
chr3 (15-61)||(8587011-8587057)
chr3 (15-61)||(8593160-8593206)
chr3 (15-57)||(10954975-10955017)
chr3 (15-57)||(55401098-55401140)
chr3 (15-60)||(8383280-8383325)
chr3 (15-56)||(51206348-51206389)
chr3 (18-58)||(16000009-16000049)
chr3 (15-51)||(28918024-28918060)
chr3 (18-57)||(20503491-20503530)
chr3 (15-58)||(35994732-35994774)
chr3 (15-57)||(7928473-7928515)
chr3 (15-57)||(40993329-40993371)
chr3 (16-57)||(3865698-3865739)
chr3 (18-90)||(4990918-4991000)
chr3 (15-48)||(26508133-26508166)
chr3 (15-51)||(1509562-1509598)
chr3 (15-51)||(14209136-14209172)
chr3 (15-90)||(21256954-21257022)
chr3 (15-51)||(27505269-27505305)
chr3 (15-51)||(28812538-28812574)
chr3 (15-51)||(34185123-34185159)
chr3 (15-51)||(34910340-34910376)
chr3 (15-51)||(49651786-49651822)
chr3 (22-57)||(26492199-26492234)
chr3 (20-90)||(40150531-40150602)
chr3 (15-57)||(7171524-7171566)
chr3 (15-57)||(8789544-8789586)
chr3 (15-48)||(4987294-4987327)
chr3 (61-90)||(8789494-8789523)
chr3 (61-90)||(8842413-8842442)
chr3 (15-56)||(10268481-10268522)
chr3 (16-90)||(10335251-10335321)
chr3 (15-84)||(13414492-13414560)
chr3 (61-90)||(20503549-20503578)
chr3 (15-52)||(21479141-21479178)
chr3 (15-56)||(25093525-25093566)
chr3 (61-90)||(34185058-34185087)
chr3 (61-90)||(55401159-55401188)
chr3 (15-51)||(14216915-14216951)
chr3 (15-51)||(14223044-14223080)
chr3 (15-51)||(14829712-14829748)
chr3 (20-56)||(15505785-15505821)
chr3 (15-51)||(15796294-15796330)
chr3 (15-51)||(25948887-25948923)
chr3 (15-55)||(35222961-35223001)
chr3 (18-46)||(35312080-35312108)
chr3 (15-51)||(41961650-41961686)
[»] chr6 (51 HSPs)
chr6 (15-57)||(28152121-28152163)
chr6 (15-57)||(34595157-34595199)
chr6 (15-90)||(7938139-7938213)
chr6 (18-57)||(28715321-28715360)
chr6 (18-56)||(7977825-7977863)
chr6 (15-83)||(9911495-9911564)
chr6 (20-57)||(16388211-16388248)
chr6 (15-80)||(21924907-21924971)
chr6 (15-51)||(10770674-10770710)
chr6 (15-51)||(16766720-16766756)
chr6 (17-57)||(32978893-32978933)
chr6 (15-58)||(403857-403900)
chr6 (18-57)||(6898275-6898314)
chr6 (18-57)||(26402674-26402713)
chr6 (15-57)||(426508-426550)
chr6 (15-57)||(8776967-8777009)
chr6 (15-49)||(9522914-9522948)
chr6 (15-57)||(17841583-17841625)
chr6 (15-56)||(1700375-1700416)
chr6 (16-57)||(4877967-4878008)
chr6 (15-56)||(7265588-7265629)
chr6 (15-52)||(7801155-7801192)
chr6 (15-90)||(7086818-7086898)
chr6 (15-51)||(8365519-8365555)
chr6 (46-90)||(8805530-8805574)
chr6 (15-90)||(9025451-9025530)
chr6 (15-51)||(9107370-9107406)
chr6 (17-57)||(27904030-27904070)
chr6 (15-51)||(31384943-31384979)
chr6 (15-53)||(853857-853895)
chr6 (15-57)||(7378002-7378044)
chr6 (15-49)||(16833331-16833365)
chr6 (15-57)||(19040375-19040417)
chr6 (15-57)||(24645504-24645546)
chr6 (15-53)||(32511664-32511702)
chr6 (16-57)||(1191694-1191735)
chr6 (15-52)||(3209405-3209442)
chr6 (61-90)||(4878026-4878055)
chr6 (18-55)||(6751878-6751915)
chr6 (18-51)||(12696350-12696383)
chr6 (61-90)||(17327596-17327625)
chr6 (61-90)||(17841535-17841564)
chr6 (18-51)||(21395308-21395341)
chr6 (24-57)||(23771610-23771643)
chr6 (15-72)||(31428983-31429039)
chr6 (15-51)||(5970108-5970144)
chr6 (20-60)||(6327509-6327549)
chr6 (15-51)||(7027265-7027301)
chr6 (62-90)||(7723205-7723233)
chr6 (15-51)||(8714003-8714039)
chr6 (24-60)||(16388070-16388106)
[»] chr2 (38 HSPs)
chr2 (15-57)||(2438713-2438755)
chr2 (15-57)||(19536391-19536433)
chr2 (19-60)||(21624294-21624335)
chr2 (15-57)||(5040757-5040799)
chr2 (15-57)||(30404844-30404886)
chr2 (15-56)||(18421986-18422027)
chr2 (22-57)||(15972903-15972938)
chr2 (14-57)||(28596491-28596534)
chr2 (15-54)||(37559000-37559039)
chr2 (15-57)||(5367215-5367257)
chr2 (15-56)||(20242722-20242763)
chr2 (20-57)||(20473350-20473387)
chr2 (15-90)||(20539638-20539710)
chr2 (15-52)||(44635521-44635558)
chr2 (15-51)||(974770-974806)
chr2 (18-50)||(11223864-11223896)
chr2 (15-51)||(15657887-15657923)
chr2 (15-51)||(23058442-23058478)
chr2 (20-56)||(27460065-27460101)
chr2 (15-51)||(30717530-30717566)
chr2 (15-51)||(33153447-33153483)
chr2 (18-90)||(42832238-42832309)
chr2 (18-57)||(18841007-18841046)
chr2 (15-90)||(31018613-31018683)
chr2 (18-57)||(43585999-43586038)
chr2 (19-57)||(12224250-12224288)
chr2 (15-57)||(18255974-18256016)
chr2 (18-56)||(33884077-33884115)
chr2 (15-57)||(34691799-34691841)
chr2 (15-57)||(34714211-34714253)
chr2 (61-90)||(2438665-2438694)
chr2 (18-51)||(12668423-12668456)
chr2 (61-90)||(26769606-26769635)
chr2 (16-57)||(29176487-29176528)
chr2 (18-51)||(36756344-36756377)
chr2 (61-90)||(37419838-37419867)
chr2 (15-56)||(38117154-38117195)
chr2 (15-51)||(37419766-37419802)
[»] scaffold0083 (1 HSPs)
scaffold0083 (18-57)||(45524-45563)
[»] scaffold0652 (1 HSPs)
scaffold0652 (15-57)||(456-498)
[»] scaffold0223 (1 HSPs)
scaffold0223 (15-81)||(20195-20261)
[»] scaffold0027 (1 HSPs)
scaffold0027 (15-90)||(46705-46770)
[»] scaffold0025 (1 HSPs)
scaffold0025 (15-51)||(23793-23829)
[»] scaffold0050 (1 HSPs)
scaffold0050 (18-57)||(70304-70343)
[»] scaffold0004 (3 HSPs)
scaffold0004 (15-50)||(123651-123686)
scaffold0004 (47-90)||(92893-92935)
scaffold0004 (18-51)||(83186-83219)
[»] scaffold0021 (1 HSPs)
scaffold0021 (15-48)||(130505-130538)
[»] scaffold0171 (2 HSPs)
scaffold0171 (15-51)||(23443-23479)
scaffold0171 (15-51)||(23534-23570)
[»] scaffold0136 (1 HSPs)
scaffold0136 (15-51)||(3849-3885)
[»] scaffold0793 (2 HSPs)
scaffold0793 (15-50)||(4884-4919)
scaffold0793 (61-90)||(4827-4856)
[»] scaffold0011 (1 HSPs)
scaffold0011 (15-50)||(17750-17785)
[»] scaffold0053 (1 HSPs)
scaffold0053 (27-57)||(8833-8863)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-56)||(63799-63837)
[»] scaffold0475 (1 HSPs)
scaffold0475 (61-90)||(3392-3421)
[»] scaffold0306 (1 HSPs)
scaffold0306 (15-52)||(13423-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (15-52)||(21867-21904)
[»] scaffold0044 (1 HSPs)
scaffold0044 (15-48)||(53203-53236)
[»] scaffold0512 (1 HSPs)
scaffold0512 (29-57)||(5030-5058)
[»] scaffold0361 (1 HSPs)
scaffold0361 (15-57)||(14553-14592)
[»] scaffold0246 (1 HSPs)
scaffold0246 (15-43)||(19598-19626)
[»] scaffold0236 (1 HSPs)
scaffold0236 (15-51)||(25768-25804)
[»] scaffold0103 (1 HSPs)
scaffold0103 (15-43)||(51834-51862)
[»] scaffold0086 (1 HSPs)
scaffold0086 (62-90)||(3024-3052)
[»] scaffold0009 (3 HSPs)
scaffold0009 (18-58)||(174546-174586)
scaffold0009 (18-58)||(180059-180099)
scaffold0009 (61-89)||(188484-188512)


Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 61 - 335
Target Start/End: Complemental strand, 22943324 - 22943051
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgctaatgacaaattttactacaaaaatcatatcatatatcatccggtaggtgaaaactctgtgaaccaaaaat 160  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22943324 gacacgcctaatccgaggagtgtc-gtgctaatgacaaattttactacaaaaatcatatcatatatcatccggtaggtgaaaactctgtgaaccaaaaat 22943226  T
Q  161 ctggtgagaagggctttgaacaaagacagctacaccacatttgctgctattgaatcctccccataacggaaaattaacagttcctgttattgtcttcttg 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  22943225 ctggtgagaagggctttgaacaaagacagctacaccacatttgctgctattgaatcctccccacaatggaaaattaacagttcctgttattgtcttcttg 22943126  T
Q  261 gcagatatgtctttttcagtgcagagtttttcgagctttctaacgacaaaatcgtttgatagaacccggcctttg 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  22943125 gcagatatgtctttttcagtgcagagtttttcgagctttctaacgacaaaatcatttgatagaacacggcctttg 22943051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 4948675 - 4948748
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||  | |||||| ||||||    
T  4948675 atcacataattcagtgtaattacaagtgtcggtgtcggacac--gagacacgcctaatcgaatgagtgtacgtgct 4948748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 31514896 - 31514967
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||| |||| ||||||||| ||||| |||||||    |||||||||||||||||||||||||||||    
T  31514896 atcacataattcagcgtaactacaagtgttggtgttggacacg----acacgcctaatccgaggagtgtccgtgct 31514967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 20873092 - 20873134
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  20873092 atcacataatttagtgtaattacaagtgtcggtgtcggacacg 20873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 24613543 - 24613585
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  24613543 atcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 25566864 - 25566943
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgt----gacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||||||||||||||||||     ||||    |||||||||||||||||||||||| |||||    
T  25566864 atcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgtctgtgct 25566943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 40332214 - 40332256
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  40332214 atcacataattcagtgtaattacaagtgtcggtgtgggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 30271287 - 30271247
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacgtg 59  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  30271287 cataatgcagtgtaattacaagtgtcggtgtcggacacgtg 30271247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 30077424 - 30077385
Alignment:
Q  14 catcacataattcagtgtaattacaagtgtcggtgtcgga 53  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  30077424 catcacataattcagtgtaattacaagtgtccgtgtcgga 30077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 18407742 - 18407784
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  18407742 atcacataattcagtgtaattacaagtgtcgctgccggacacg 18407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 31557019 - 31557061
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  31557019 atcacataattcagtgtaattacaagtttcggtgtcagacacg 31557061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 36450790 - 36450748
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  36450790 atcacagaattcagtgtaattacaagtgtaggtgtcggacacg 36450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 8342995 - 8343040
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  8342995 atcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgt 8343040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 8343339 - 8343384
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||    
T  8343339 atcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgt 8343384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 11833888 - 11833963
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtga---cacgcctaatccgaggagtgtccgtgct 90  Q
    |||| |||||||||||||| | |||| |||||||||||| ||| |   |||||||||||||||||||||| |||||    
T  11833888 acatgattcagtgtaattatatgtgttggtgtcggacacatgtaattacacgcctaatccgaggagtgtctgtgct 11833963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 22204669 - 22204710
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacgtgtg 61  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  22204669 ataattcagtgtaattacaagtgtcagtgtcagacacgtgtg 22204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 24669459 - 24669492
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||||||    
T  24669459 acataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 2572092 - 2572056
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2572092 atcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 22596020 - 22596056
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggac 54  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22596020 acataattcagtgtaattacaagtgttggtgtcggac 22596056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 3025574 - 3025616
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||| ||||||||||||    
T  3025574 atcacataattcagtgtaattataggtgtcagtgtcggacacg 3025616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 4786374 - 4786336
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgga 53  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  4786374 atcacataattcagtgtaattatatgtgtcggtgtcgga 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 5813616 - 5813657
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||| || ||||||| |||||||||||||||||||||||    
T  5813616 tcacatattttagtgtaaatacaagtgtcggtgtcggacacg 5813657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 13844632 - 13844591
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  13844632 atcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 15023288 - 15023255
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcgga 53  Q
    |||||||||||||||||||||||||| |||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcgga 15023255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18170515 - 18170478
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  18170515 acataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18634083 - 18634046
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  18634083 acataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 31109493 - 31109464
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  31109493 gacacgcctaatccgaggagtgtccgtgct 31109464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 34897108 - 34897149
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  34897108 atcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 3025632 - 3025664
Alignment:
Q  58 tgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||| |||||||||||||||||||||||    
T  3025632 tgtgacacggctaatccgaggagtgtccgtgct 3025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 8847279 - 8847315
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  8847279 atcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 11927122 - 11927086
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  11927122 atcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15816165 - 15816129
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  15816165 atcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 22651999 - 22652035
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||| | |||||||||||||||||||||    
T  22651999 atcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 26902211 - 26902175
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  26902211 atcacataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 33405418 - 33405378
Alignment:
Q  17 cacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||| |||||||||| | ||||||||||||||||||    
T  33405418 cacataatttagtgtaattatatgtgtcggtgtcggacacg 33405378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 35702619 - 35702548
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacg-tgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  35702619 ataattaagtgtaattacaagtgtcagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgct 35702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 22881652 - 22881573
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg----tgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||| |||||||||||||||||||||||||||||||     | |||||| |||||||||||||||||||||||    
T  22881652 atcacataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatccgaggagtgtccgtgct 22881573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 24334737 - 24334670
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||| || ||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggacacgt----cacgcctaatccaagtagtgtccgtgct 24334670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 13436481 - 13436556
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||| | |||| ||||||||||||||   ||||| |||||||||| ||||||||||||    
T  13436481 atcacataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgct 13436556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 51410048 - 51410090
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51410048 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 51410090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 18337352 - 18337393
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18337352 atcacataattcagtgtaattacaagtgtcggtgtcggacac 18337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19058889 - 19058849
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcggacacgt 19058849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 1815280 - 1815322
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  1815280 atcacataattcagtgtaattacaagtgtcggtgtccgacacg 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 22515923 - 22515881
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  22515923 atcacataatttagtgtaattacaagtgtcggtgtcggacacg 22515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 38078697 - 38078655
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  38078697 atcacataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 40258969 - 40258927
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  40258969 atcacataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 41877503 - 41877462
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtg 59  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  41877503 acataatttagtgtaattacaagtgtcggtgtcggacacgtg 41877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 24577222 - 24577186
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  24577222 atcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 35919312 - 35919232
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtc-----ggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||| |||||||      |||||||||||| | ||||||||||||| ||||| ||||||||||    
T  35919312 atcacataattcagtgtaattataagtgtccgtgtcgtgtcggacacgcgggacacgcctaatcggaggactgtccgtgct 35919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 42359485 - 42359445
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  42359485 atcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 47989520 - 47989556
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  47989520 atcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 21620978 - 21621021
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  21620978 atcacataattcagtgtatttacaagcgtcggtgtcggacacgt 21621021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 2218264 - 2218341
Alignment:
Q  17 cacataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||| |||||||||||||||||||||||||     ||||| |  ||||||||||||| ||||||||||||||||    
T  2218264 cacataatttagtgtaattacaagtgtcggtgtcgtgtccgacac-taggacacgcctaatctgaggagtgtccgtgct 2218341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 31672931 - 31672889
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  31672931 atcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 46348419 - 46348377
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  46348419 atcatataatttagtgtaattacaagtgtcggtgtcggacacg 46348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 52903272 - 52903318
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtg 61  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  52903272 atcatataattcagtgtaattatatgtgtcggtgtcggacacgtgtg 52903318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 6612204 - 6612171
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 30749863 - 30749904
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  30749863 atcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 30771314 - 30771355
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  30771314 atcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 113322 - 113358
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||| |||||||    
T  113322 atcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 1486745 - 1486709
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1486745 atcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 1705028 - 1704992
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1705028 atcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 2288203 - 2288131
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||| ||||||||   ||||||||||||||||| || | ||||||||||||||||| |||| |||||    
T  2288203 atcacataattcaatgtaattat--gtgtcggtgtcggacacctgag-cacgcctaatccgaggaatgtcagtgct 2288131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 5944306 - 5944342
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5944306 atcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 6332693 - 6332729
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6332693 atcacataattcagtgtaattacaagtatcggtgtcg 6332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 31694746 - 31694710
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31694746 atcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1864916 - 1864873
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    |||||||||||||||||||||| | |||||||||| ||||||||    
T  1864916 atcacataattcagtgtaattatatgtgtcggtgttggacacgt 1864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 21378604 - 21378635
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgt 49  Q
    ||||||||||||||||||||||||||||||||    
T  21378604 acataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 28273124 - 28273089
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    |||| |||||||||||||||||||||||||||||||    
T  28273124 atcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 31015066 - 31015097
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcgg 46  Q
    ||||||||||||||||||||||||||||||||    
T  31015066 atcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 37598861 - 37598896
Alignment:
Q  22 aattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacg 37598896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 17705622 - 17705552
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||| | ||||| |||||||||    | ||||||| ||||| ||||||||||||||||    
T  17705622 atcacataattcagtgtaattatatgtgtc-gtgtcggac----gcgacacgcttaatctgaggagtgtccgtgct 17705552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 18190141 - 18190103
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 36878484 - 36878526
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||||||||| ||||||    
T  36878484 atcacataattcagtgtaattataggtgtcggtgtctgacacg 36878526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 5376533 - 5376500
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||| ||||||||||||||    
T  5376533 acataattcagtgtaattaaaagtgtcggtgtcg 5376500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 16297256 - 16297227
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  16297256 gacacgcctaatccgaggagtgtccgtgct 16297227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 21366027 - 21365998
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgct 21365998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 22515862 - 22515833
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  22515862 gacacgcctaatccgaggagtgtccgtgct 22515833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 22947814 - 22947843
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  22947814 gacacgcctaatccgaggagtgtccgtgct 22947843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 30173795 - 30173762
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||| |||||||||||||||||||||||||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcg 30173762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 37598915 - 37598944
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  37598915 gacacgcctaatccgaggagtgtccgtgct 37598944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 40181894 - 40181935
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | || ||||||||||||||    
T  40181894 atcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 42359424 - 42359395
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  42359424 gacacgcctaatccgaggagtgtccgtgct 42359395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 46940826 - 46940754
Alignment:
Q  18 acataattcagtgtaattacaagtgtcg-gtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||| ||||||||||||||| ||| ||||| |||||  |  |||||||||||||||||||||| ||||||    
T  46940826 acataattaagtgtaattacaagtttcgcgtgtccgacaccgga-acacgcctaatccgaggagtgttcgtgct 46940754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 47989592 - 47989621
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  47989592 gacacgcctaatccgaggagtgtccgtgct 47989621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 3490423 - 3490353
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||| |||||||||||||||||||||| ||||| ||||  || |||||  |||||||||| ||||||||||||    
T  3490423 acattattcagtgtaattacaagtgtc-gtgtccgaca-ttgggacacatctaatccgagaagtgtccgtgct 3490353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15449268 - 15449232
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  15449268 atcacataatttagtgtaattacaagtgtctgtgtcg 15449232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 18471323 - 18471355
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggt 47  Q
    ||||||||||||||| |||||||||||||||||    
T  18471323 atcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 25272505 - 25272541
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  25272505 atcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 28663631 - 28663667
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||  |||||||||||||||||||||||    
T  28663631 atcacataattctatgtaattacaagtgtcggtgtcg 28663667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 34371736 - 34371772
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  34371736 atcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 44482253 - 44482289
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  44482253 atcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 15884011 - 15884084
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg----tgtgacacgcctaatccgaggagtgtc 84  Q
    |||||||||||||||||||||||||||||||||||||||||||    ||  |||||||||||||||||||||||    
T  15884011 atcacataattcagtgtaattacaagtgtcggtgtcggacacgacactggaacacgcctaatccgaggagtgtc 15884084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 6247645 - 6247723
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg---tgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||||||||||||||||||||||||    | ||||| ||||||||||| |||||| |||||    
T  6247645 atcacataattcagtgtaattacaagtgtcggtgtcggacacggcacgggacacacctaatccgagaagtgtctgtgct 6247723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 21191092 - 21191051
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21191092 atcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 24906334 - 24906258
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg----tgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||||||||||| ||||||| |    |  |||||||||||| |||||||||||||||||    
T  24906334 acataattcagtgtaattacaagtgtcggtatcggacatgacaataggacacgcctaattcgaggagtgtccgtgct 24906258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 21576781 - 21576739
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  21576781 atcacataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 10298593 - 10298663
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||| || ||||||||||||||||||||||| |    |  ||||||||||||||||||||||||||||||    
T  10298593 tcacataatacaatgtaattacaagtgtcggtgtcgta----tcggacacgcctaatccgaggagtgtccgtgct 10298663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 33178048 - 33178089
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  33178048 atcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6326330 - 6326259
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||| | |||||||||  |  ||||||||||| |||| ||||||||||||    
T  6326330 acataattcagtgtaattacaagtgtcagcgtcggacac-cggaacacgcctaattcgagaagtgtccgtgct 6326259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 21351940 - 21351906
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  21351940 tcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 28588710 - 28588668
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  28588710 atcacataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 43564904 - 43564946
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  43564904 atcacataatttagtgtaattataagtgtcggtgtcggacacg 43564946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 13287435 - 13287366
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg-gacacgtgtgacacgcctaatccgaggagtgt 83  Q
    ||||||||||||||||||| ||||||||||||||||| | |  ||  ||||||||||||| |||||||||    
T  13287435 atcacataattcagtgtaactacaagtgtcggtgtcgtgtcctgtcggacacgcctaatctgaggagtgt 13287366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 21542056 - 21542089
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 42893383 - 42893424
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  42893383 atcacataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 7218303 - 7218271
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggt 47  Q
    |||||||||||||||||||||||||||||||||    
T  7218303 atcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 8420053 - 8420089
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggac 54  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8420053 acataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 39698564 - 39698600
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||| ||||||    
T  39698564 atcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 41995531 - 41995577
Alignment:
Q  43 tcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||    
T  41995531 tcggtgtcggacacgag-gacacgcctaatcctaggagtgtccgtgct 41995577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 2548413 - 2548451
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  2548413 acataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 14422925 - 14422967
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| |||| ||| |||||||||||    
T  14422925 atcacataattcagtgtaattataagtttcgatgtcggacacg 14422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 30502424 - 30502382
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  30502424 atcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 30542767 - 30542725
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  30542767 atcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 32426905 - 32426832
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgc 89  Q
    ||||||||||||| ||||||||   |||||||||||  ||||| | || |||||| |||||||||||||||||||    
T  32426905 atcacataattcattgtaattatttgtgtcggtgtctaacacggg-gatacgccttatccgaggagtgtccgtgc 32426832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 4105343 - 4105372
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  4105343 gacacgcctaatccgaggagtgtccgtgct 4105372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 14873606 - 14873635
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  14873606 gacacgcctaatccgaggagtgtccgtgct 14873635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 15382502 - 15382539
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  15382502 atcatataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 17123131 - 17123160
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  17123131 gacacgcctaatccgaggagtgtccgtgct 17123160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 21191031 - 21191002
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  21191031 gacacgcctaatccgaggagtgtccgtgct 21191002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 21522776 - 21522809
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| |||||||||||    
T  21522776 acataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 21533342 - 21533375
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| |||||||||||    
T  21533342 acataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 21576720 - 21576691
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  21576720 gacacgcctaatccgaggagtgtccgtgct 21576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 22423799 - 22423770
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  22423799 gacacgcctaatccgaggagtgtccgtgct 22423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 35017127 - 35017156
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  35017127 gacacgcctaatccgaggagtgtccgtgct 35017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 39268573 - 39268544
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  39268573 gacacgcctaatccgaggagtgtccgtgct 39268544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 39698636 - 39698665
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgct 39698665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 41633761 - 41633794
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| |||||||||||    
T  41633761 acataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 43001889 - 43001918
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  43001889 gacacgcctaatccgaggagtgtccgtgct 43001918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 4105282 - 4105310
Alignment:
Q  15 atcacataattcagtgtaattacaagtgt 43  Q
    |||||||||||||||||||||||||||||    
T  4105282 atcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 7677728 - 7677764
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  7677728 atcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 12199953 - 12199989
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||  ||||||||||||||||||||    
T  12199953 atcacataattcagtacaattacaagtgtcggtgtcg 12199989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 19579724 - 19579760
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  19579724 atcacataatttagtgcaattacaagtgtcggtgtcg 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 31084346 - 31084382
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31084346 atcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 37328880 - 37328844
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  37328880 atcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 6879501 - 6879435
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagt 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||| |||||||    
T  6879501 atcacataattaagtgtaattacaagtgtcggtgtcggacacgcataacacgcctaatctgaggagt 6879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 42640552 - 42640637
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgt----------gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||    
T  42640552 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgct 42640637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 12797374 - 12797332
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12797374 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 12797332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 30094066 - 30094127
Alignment:
Q  29 tgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgcta 91  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||    
T  30094066 tgtaattacaagtgtcggtgtcggacac-cgggacacgcctaatccgaagagtgtccgtgcta 30094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 16073421 - 16073459
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacg 16073459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 23293022 - 23292980
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  23293022 atcacataattcagtataattacaagtgtcggtgtcggacacg 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 28964284 - 28964242
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  28964284 atcacataattcagtgtaattacaagtgtctgtgtcggacacg 28964242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 29205467 - 29205509
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  29205467 atcacataattcagtgtaattacaagtgtcggtgttggacacg 29205509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30298973 - 30299042
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||||||  |    | |||||| |||||||||||||||||||||||    
T  30298973 acataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgct 30299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30327841 - 30327910
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||||||  |    | |||||| |||||||||||||||||||||||    
T  30327841 acataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgct 30327910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 49431049 - 49431091
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  49431049 atcacataattcagtgtaattaaaagtgtcggtgtcggacacg 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 54580059 - 54580017
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  54580059 atcacataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 21945529 - 21945566
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 482272 - 482229
Alignment:
Q  17 cacataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  482272 cacataattcagtgtaattataactgtcggtgtcggacacgtgt 482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 22440636 - 22440563
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||| | ||| || |||| |||||  | ||||||||||||||||||||||||||||||    
T  22440636 atcacataattcagtgtaattatatgtgacg-tgtccgacactag-gacacgcctaatccgaggagtgtccgtgct 22440563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 4157172 - 4157214
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  4157172 atcacataatttagtgcaattacaagtgtcggtgtcggacacg 4157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 4157459 - 4157501
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  4157459 atcacataatttagtgcaattacaagtgtcggtgtcggacacg 4157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8423754 - 8423712
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  8423754 atcacataattcagtgtaattataaatgtcggtgtcggacacg 8423712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 11596388 - 11596352
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11596388 atcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 715643 - 715608
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||||||||||||||||||||| ||||||    
T  715643 atcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 752969 - 752934
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||||||||||||||||||||| ||||||    
T  752969 atcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 2362008 - 2361969
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  2362008 acataatttagtgtaattaaaagtgtcggtgtcggacacg 2361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 28000778 - 28000743
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    |||| |||||||||||||||||||||||||||||||    
T  28000778 atcatataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 6485647 - 6485613
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgt 49  Q
    ||||||||||| |||||||||||||||||||||||    
T  6485647 atcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 12895310 - 12895268
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||  ||||||||| ||||||||||||||||||||    
T  12895310 atcacataattttgtgtaattataagtgtcggtgtcggacacg 12895268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 34306828 - 34306798
Alignment:
Q  27 agtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacg 34306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 35158021 - 35157979
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  35158021 atcacataatttagtgtaattataagtgtcggtgtctgacacg 35157979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 40179672 - 40179630
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | | ||||||||||||||||    
T  40179672 atcacataattcagtgtaattatatgcgtcggtgtcggacacg 40179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 715580 - 715551
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  715580 gacacgcctaatccgaggagtgtccgtgct 715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 752906 - 752877
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  752906 gacacgcctaatccgaggagtgtccgtgct 752877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 3064903 - 3064874
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgct 3064874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 4383450 - 4383479
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  4383450 gacacgcctaatccgaggagtgtccgtgct 4383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 5775339 - 5775310
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  5775339 gacacgcctaatccgaggagtgtccgtgct 5775310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 23292961 - 23292932
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  23292961 gacacgcctaatccgaggagtgtccgtgct 23292932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 28084608 - 28084637
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  28084608 gacacgcctaatccgaggagtgtccgtgct 28084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 3947798 - 3947766
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||| ||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 4383390 - 4383426
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  4383390 atcacataattcagtgtaattacaaatgtcagtgtcg 4383426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 12895152 - 12895116
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||  ||||||||||||||||||||||    
T  12895152 atcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 17425421 - 17425353
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||   ||||| ||||| |||||  | |||||||||||||||||||||||| |||||    
T  17425421 cataattcagtgtaattat--gtgtctgtgtcagacacaag-gacacgcctaatccgaggagtgtctgtgct 17425353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 19482691 - 19482727
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||| |||||||||||||||| |||||||    
T  19482691 atcacataattcggtgtaattacaagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 28084545 - 28084581
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  28084545 atcacataattcaatgtaattacaagtgtctgtgtcg 28084581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 30982914 - 30982878
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  30982914 atcacatatttcagtgtaattataagtgtcggtgtcg 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 40481659 - 40481687
Alignment:
Q  15 atcacataattcagtgtaattacaagtgt 43  Q
    |||||||||||||||||||||||||||||    
T  40481659 atcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 28155596 - 28155667
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||||| |||| ||||||||||    
T  28155596 acataattcggtgtaattacaagtgtcggtgtcggacaccag-gacacgcctaatccaaggaatgtccgtgct 28155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19213826 - 19213906
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg--tgtgaca---cgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||| |||||||| |||||||||||||||||||||||   | ||||   ||||||||||||||||||||||||||    
T  19213826 atcacataatgcagtgtaaatacaagtgtcggtgtcggacacgaccgggacacgccgcctaatccgaggagtgtccgtgct 19213906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 21880178 - 21880217
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 25481925 - 25481967
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  25481925 atcacataattcagtgtaattacaagtgttggtgtcggacacg 25481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 18039022 - 18039058
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  18039022 atcacataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 21560526 - 21560562
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  21560526 atcacataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 24339665 - 24339701
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  24339665 atcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35861987 - 35862064
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg---gacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||| |||||||  ||||||| ||||||   |||||| | ||||||||||||||||||||||||||||||    
T  35861987 atcacataattcaatgtaattgtaagtgtctgtgtcgtcggacacgag-gacacgcctaatccgaggagtgtccgtgct 35862064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 11272586 - 11272536
Alignment:
Q  40 gtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||| | ||||||||||||||||||||| || |||||    
T  11272586 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtatctgtgct 11272536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 15680832 - 15680874
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  15680832 atcacataatttagtgtaattataagtgtcggtgtcggacacg 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 3991347 - 3991422
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg--gacacg--tgtgacacgcctaatccgaggagtgtccg 86  Q
    ||||||||||||||| |||||||||||||||||||||  |   ||  || ||||||||||||||||||||||||||    
T  3991347 atcacataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagtgtccg 3991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 27945067 - 27945100
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||||||    
T  27945067 acataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 33994236 - 33994277
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacg 33994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 2334273 - 2334309
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2334273 atcacataatttagtgtaattacaagtgtcggtgtcg 2334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5409872 - 5409836
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5409872 atcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 9408370 - 9408334
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9408370 atcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 9778523 - 9778559
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9778523 atcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 26033497 - 26033465
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggt 47  Q
    |||||||||||||||||||||||||||||||||    
T  26033497 atcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 32094056 - 32094020
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32094056 atcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 7197327 - 7197292
Alignment:
Q  21 taattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 7438729 - 7438764
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7438729 atcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 8234172 - 8234211
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  8234172 acataattcagtgtagttacaagtgccggtgtcggacacg 8234211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 11061112 - 11061069
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||    
T  11061112 atcacataatttagtataattacaagtgtcggtgtcagacacgt 11061069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 11272617 - 11272586
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcg 11272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 18215222 - 18215144
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtgacacgcctaatccgaggagtgtccgtgc 89  Q
    |||||||||| ||||||| ||||||||||||||||||     |||||  | ||||||||||||| |||||||||||||||    
T  18215222 atcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacac-cgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 25956471 - 25956510
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25956471 acataattcaatgtaatcacaagtgtcggtgtcggacacg 25956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 18213069 - 18213027
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  18213069 atcacataatttagtgtaattatatgtgtcggtgtcggacacg 18213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 21864831 - 21864873
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||| |||||| ||||||||||||||||||| |||||||||||    
T  21864831 atcatataatttagtgtaattacaagtgtcgctgtcggacacg 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 26733327 - 26733369
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| |||||| | ||||||||||||||||||    
T  26733327 atcacataattcagtctaattaaatgtgtcggtgtcggacacg 26733369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 39138467 - 39138509
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| |  |||||||||||||||||    
T  39138467 atcacataattcagtgtaattatatatgtcggtgtcggacacg 39138509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 40287385 - 40287308
Alignment:
Q  23 attcagtgtaattacaagtgtcggtgtcggacacgtgt----------gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||| |||||||| |||          |||| |||||||||||||||||||||||||    
T  40287385 attcagtgtaattacaagtgtcggtatcggacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgct 40287308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 1401049 - 1401090
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||| |||| |||||||| ||||||    
T  1401049 tcacataattcagtgtaattataagtatcggtgtccgacacg 1401090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 5409806 - 5409777
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  5409806 gacacgcctaatccgaggagtgtccgtgct 5409777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 13770717 - 13770750
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||| |||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 20549814 - 20549855
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||| |||||||||||||||| | |||||||||||||||||    
T  20549814 atcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 25822685 - 25822714
Alignment:
Q  22 aattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 29763164 - 29763135
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  29763164 gacacgcctaatccgaggagtgtccgtgct 29763135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30813838 - 30813910
Alignment:
Q  18 acataattcagtgtaattacaagtgtcg-gtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||| |||| | ||||| ||||   |  |||||||||||||||||||||||||||||    
T  30813838 acataattcagtgtaattacaggtgttgcgtgtccgacatcaga-acacgcctaatccgaggagtgtccgtgct 30813910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 19992024 - 19992060
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  19992024 atcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 22602746 - 22602710
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  22602746 atcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 43027505 - 43027469
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||| |||||||| |||||||||||||||||    
T  43027505 atcacataatgcagtgtaaatacaagtgtcggtgtcg 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 25775532 - 25775575
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25775532 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 25775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 8587057 - 8587011
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtg 61  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8587057 atcacataattaagtgtaattacaagtgtcggtgtcggacatgtgtg 8587011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 8593160 - 8593206
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtg 61  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8593160 atcacataattcagtataattacaagtgtcggtgtcggacatgtgtg 8593206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 10954975 - 10955017
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  10954975 atcacataattcagtgtaatcacaagtgtcggtgtcggacacg 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 55401098 - 55401140
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  55401098 atcacataatttagtgtaattacaagtgtcggtgtcggacacg 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 8383280 - 8383325
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  8383280 atcatataattcagtgtaattataagtgtcggtgtcggacacgtgt 8383325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 51206389 - 51206348
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  51206389 atcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16000049 - 16000009
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  16000049 acataattcagtgtaactacaagtgtcggtgtcggacacgt 16000009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 28918024 - 28918060
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  28918024 atcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 20503491 - 20503530
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacg 20503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 35994774 - 35994732
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  35994774 atcacataattcagtgtaattacaagtgtc-gtgtcggacacgt 35994732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 7928473 - 7928515
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  7928473 atcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 40993371 - 40993329
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  40993371 atcacataattcagtgtaattatatgtgtcggtgtcggacacg 40993329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 3865698 - 3865739
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  3865698 tcacataattcagtataattacaagtgtcggtgtctgacacg 3865739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 4991000 - 4990918
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg-----------gacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||| ||||           |||||||| ||||||||||||||||||||||||||||||    
T  4991000 acataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacacgtg-gacacgcctaatccgaggagtgtccgtgct 4990918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 26508133 - 26508166
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtg 48  Q
    ||||||||||||||||||||||||||||||||||    
T  26508133 atcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 1509562 - 1509598
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1509562 atcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 14209136 - 14209172
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||| ||||||    
T  14209136 atcacataattcagtgtaattacaagtgtcagtgtcg 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 21257022 - 21256954
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||| ||||||||||||||||| |      |||| ||||| ||||||||||||||||||||||||    
T  21257022 atcacataattcagtataattacaagtgtcggtat------cgtg-gacacacctaatccgaggagtgtccgtgct 21256954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 27505269 - 27505305
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  27505269 atcacataattaagtgtaattacaagtgtcggtgtcg 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 28812538 - 28812574
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28812538 atcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 34185159 - 34185123
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34185159 atcacacaattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 34910340 - 34910376
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||| ||||||||||    
T  34910340 atcacataattcagtgtaattacaagagtcggtgtcg 34910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 49651822 - 49651786
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||| |||||||||||||||||||||||    
T  49651822 atcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 26492234 - 26492199
Alignment:
Q  22 aattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||| |||||||||||||||    
T  26492234 aattcagtgtaattacaagtatcggtgtcggacacg 26492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 40150602 - 40150531
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacgtgt-gacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||| |||||| | | ||||||||||| |||| | || ||||| ||||||||||||||||||||||||    
T  40150602 ataattcaatgtaatcatatgtgtcggtgtctgacatgcgtcgacacacctaatccgaggagtgtccgtgct 40150531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 7171524 - 7171566
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||| ||||||| |||||||||||||||| |||||||||||||    
T  7171524 atcatataattcggtgtaattacaagtgttggtgtcggacacg 7171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8789586 - 8789544
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  8789586 atcacataattccgtgtaattatatgtgtcggtgtcggacacg 8789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 4987327 - 4987294
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtg 48  Q
    ||||||||||||||||||||||||||||| ||||    
T  4987327 atcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 8789523 - 8789494
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  8789523 gacacgcctaatccgaggagtgtccgtgct 8789494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 8842413 - 8842442
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgct 8842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 10268522 - 10268481
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||| |||||||||||||||||| ||||| |||||    
T  10268522 atcacataatttagtgtaattacaagtgtcagtgtcagacac 10268481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 10335321 - 10335251
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||| || ||||||| |||||||||||||||||| |||    ||||||||||||  ||||||||| ||||||    
T  10335321 tcacatattttagtgtaaatacaagtgtcggtgtcgggcac----gacacgcctaattggaggagtgttcgtgct 10335251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 13414492 - 13414560
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtc 84  Q
    |||| |||||||| |||||||| | |||||||||||||||||  | ||||||||| ||||||| ||||||    
T  13414492 atcaaataattcaatgtaattatatgtgtcggtgtcggacac-agggacacgccttatccgagaagtgtc 13414560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 20503549 - 20503578
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  20503549 gacacgcctaatccgaggagtgtccgtgct 20503578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 21479141 - 21479178
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  21479141 atcacacaattcagtgtaattactagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 25093525 - 25093566
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  25093525 atcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 34185087 - 34185058
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  34185087 gacacgcctaatccgaggagtgtccgtgct 34185058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 55401159 - 55401188
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgct 55401188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 14216915 - 14216951
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  14216915 atcatataattcagtgtaattacaagtgtccgtgtcg 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 14223044 - 14223080
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  14223044 atcatataattcagtgtaattacaagtgtccgtgtcg 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 14829712 - 14829748
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||  ||||||||||||||||||||||    
T  14829712 atcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 15505821 - 15505785
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  15505821 ataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15796330 - 15796294
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||| |||||||||||||||||||| |||||||||||    
T  15796330 atcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 25948923 - 25948887
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| |||||| |||||||    
T  25948923 atcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 35222961 - 35223001
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  35222961 atcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 35312080 - 35312108
Alignment:
Q  18 acataattcagtgtaattacaagtgtcgg 46  Q
    |||||||||||||||||||||||||||||    
T  35312080 acataattcagtgtaattacaagtgtcgg 35312108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 41961686 - 41961650
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  41961686 atcacattattcggtgtaattacaagtgtcggtgtcg 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 28152121 - 28152163
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28152121 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 34595157 - 34595199
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34595157 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 7938139 - 7938213
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||| |||||| |||||||||| ||||||||||||| |||||  | ||||||||| ||||||||||||||||||||    
T  7938139 atcatataatttagtgtaattataagtgtcggtgtccgacac-cgagacacgcctgatccgaggagtgtccgtgct 7938213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 28715321 - 28715360
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 7977863 - 7977825
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7977863 acataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 9911564 - 9911495
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg-gacacgtgtgacacgcctaatccgaggagtgt 83  Q
    ||||||||||||||||||||||||||||||||||||| | ||     |||||||||||||||||||||||    
T  9911564 atcacataattcagtgtaattacaagtgtcggtgtcgtgtcaaccaggacacgcctaatccgaggagtgt 9911495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 16388248 - 16388211
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 21924971 - 21924907
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggag 80  Q
    |||| ||||||||||||||||| | |||||||||||||||||  | ||||||||||||||||||||    
T  21924971 atcaaataattcagtgtaattatatgtgtcggtgtcggacac-cgggacacgcctaatccgaggag 21924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 10770710 - 10770674
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  10770710 atcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 16766720 - 16766756
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  16766720 atcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 32978933 - 32978893
Alignment:
Q  17 cacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  32978933 cacataattaagtgtaattacaagtgtcggtgtcggacacg 32978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 403900 - 403857
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  403900 atcacataatttagtgtaactacaagtgtcggtgtcggacacgt 403857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 6898314 - 6898275
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacg 6898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 26402713 - 26402674
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  26402713 acataattcagtgtaatcacaagtgtcggtgtcggacacg 26402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 426550 - 426508
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  426550 atcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8777009 - 8776967
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  8777009 atcacaaaattcagtgtaattacaagtgttggtgtcggacacg 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 9522914 - 9522948
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  9522914 atcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 17841625 - 17841583
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  17841625 atcacataatttagtgtaattacaagtgacggtgtcggacacg 17841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 1700375 - 1700416
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  1700375 atcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4877967 - 4878008
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  4877967 tcacataattaagtataattacaagtgtcggtgtcggacacg 4878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 7265629 - 7265588
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  7265629 atcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7801192 - 7801155
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7801192 atcacataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 7086818 - 7086898
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||| |||||||||| | |||||||||| |     |||||||| |||| |||||||||||||||| ||||||||    
T  7086818 atcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacgtgagacatgcctaatccgaggagtttccgtgct 7086898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 8365555 - 8365519
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||| ||||||||||||||||||||||||    
T  8365555 atcacataattcggtgtaattacaagtgtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 8805574 - 8805530
Alignment:
Q  46 gtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||    
T  8805574 gtgtcagacacgtgggacatgcctaatccgaggagtgtccgtgct 8805530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 9025530 - 9025451
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||| | ||||||||||||     |||||  | ||||||||||||||||| ||||||||||||    
T  9025530 atcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacac-cgggacacgcctaatccgagaagtgtccgtgct 9025451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 9107406 - 9107370
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9107406 atcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 27904070 - 27904030
Alignment:
Q  17 cacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  27904070 cacataattcagtgtaattacaaatgtcggtgtcagacacg 27904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 31384943 - 31384979
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31384943 atcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 853895 - 853857
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgga 53  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  853895 atcacataattaagtgcaattacaagtgtcggtgtcgga 853857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 7378002 - 7378044
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||| |||||||| | ||||||||||||||||||    
T  7378002 atcacataattcaatgtaattatatgtgtcggtgtcggacacg 7378044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 16833331 - 16833365
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgt 49  Q
    |||||||| ||||||||||||||||||||||||||    
T  16833331 atcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 19040375 - 19040417
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||| ||||||||||||    
T  19040375 atcacataattcagtgtaattatatgtgtctgtgtcggacacg 19040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 24645504 - 24645546
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||| || ||||||||||||||||| ||||||    
T  24645504 atcacataattcagtatagttacaagtgtcggtgtcagacacg 24645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 32511702 - 32511664
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgga 53  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  32511702 atcacataattcagtgtaattataagtgttggtgtcgga 32511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 1191735 - 1191694
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||| |||||||||||||||||||||||| ||| |||||||    
T  1191735 tcacaaaattcagtgtaattacaagtgtcgatgttggacacg 1191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 3209405 - 3209442
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  3209405 atcacataatttagtgttattacaagtgtcggtgtcgg 3209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 4878026 - 4878055
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  4878026 gacacgcctaatccgaggagtgtccgtgct 4878055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6751915 - 6751878
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggaca 55  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6751915 acataattcaatgtaatcacaagtgtcggtgtcggaca 6751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 12696350 - 12696383
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||| ||||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 17327625 - 17327596
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  17327625 gacacgcctaatccgaggagtgtccgtgct 17327596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 17841564 - 17841535
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  17841564 gacacgcctaatccgaggagtgtccgtgct 17841535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 21395341 - 21395308
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||| |||||||||||||||||||||||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcg 21395308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 23771610 - 23771643
Alignment:
Q  24 ttcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||| |||||||||||||||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacg 23771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 31429039 - 31428983
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaat 72  Q
    ||||||||||||||||||||||||| ||| ||||||  |||| || ||||||||||||    
T  31429039 atcacataattcagtgtaattacaaatgtaggtgtccaacacatg-gacacgcctaat 31428983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5970144 - 5970108
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  5970144 atcacataattcagtgtaattacaaatgtgggtgtcg 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 6327549 - 6327509
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    |||||| ||||||||||||||||||| ||||||| ||||||    
T  6327549 ataattaagtgtaattacaagtgtcgatgtcggatacgtgt 6327509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 7027265 - 7027301
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| | ||||||||||||    
T  7027265 atcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 90
Target Start/End: Complemental strand, 7723233 - 7723205
Alignment:
Q  62 acacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgct 7723205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 8714003 - 8714039
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  8714003 atcacataattcagtgtaattacaaatgtgggtgtcg 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 16388106 - 16388070
Alignment:
Q  24 ttcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    ||||||||||||||||||||||||||  |||||||||    
T  16388106 ttcagtgtaattacaagtgtcggtgttagacacgtgt 16388070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 2438755 - 2438713
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2438755 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 2438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 19536433 - 19536391
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19536433 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 21624294 - 21624335
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacgtgt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcggacacgtgt 21624335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 5040757 - 5040799
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  5040757 atcacataattcaatgtaattacaagtgtcggtgtcggacacg 5040799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 30404886 - 30404844
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  30404886 atcacataattcagtgtaattacaagtgtcggcgtcggacacg 30404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 18421986 - 18422027
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  18421986 atcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 15972903 - 15972938
Alignment:
Q  22 aattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacg 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 28596491 - 28596534
Alignment:
Q  14 catcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  28596491 catcacataagtcagtgtaattataagtgtcggtgtcggacacg 28596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37559000 - 37559039
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggac 54  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  37559000 atcacataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 5367215 - 5367257
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  5367215 atcacataattcagtgtaattatatgtgtcggtgtcggacacg 5367257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 20242763 - 20242722
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  20242763 atcacataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 20473350 - 20473387
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||| |||||||||||    
T  20473350 ataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 20539710 - 20539638
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||| |||||| |||||||||||||||||||||||||     | | ||||||||| ||||||||||||||||||||    
T  20539710 atcatataatttagtgtaattacaagtgtcggtgtcg---tggcgagacacgcctgatccgaggagtgtccgtgct 20539638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 44635521 - 44635558
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  44635521 atcacgtaattcagtgtaattacaagtgtcggtgtcgg 44635558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 974770 - 974806
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||| |||||||||||||||||||||||||||||    
T  974770 atcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 11223896 - 11223864
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtc 50  Q
    |||||||||||||||||||||||||||||||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 15657887 - 15657923
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15657887 atcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 23058478 - 23058442
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23058478 atcacataatccagtgtaattacaagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 27460065 - 27460101
Alignment:
Q  20 ataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27460065 ataattcagtgtaattacaagggtcggtgtcggacac 27460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 30717566 - 30717530
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30717566 atcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 33153447 - 33153483
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||| ||||||    
T  33153447 atcacataattcagtgtaattacaagtgtccgtgtcg 33153483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 42832309 - 42832238
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||| ||||||||||||| ||||||||||||| ||| |  | |||||||||||||| |||||||||| ||||    
T  42832309 acatatttcagtgtaattataagtgtcggtgtccgactc-cgggacacgcctaatccaaggagtgtccttgct 42832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 18841046 - 18841007
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacg 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 31018613 - 31018683
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||     || ||||||||||||||||| |||||    
T  31018613 atcacatgatttagtgtaattataggtgtcggtgtcggacacgtg-----cgtctaatccgaggagtgtcagtgct 31018683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 43586038 - 43585999
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  43586038 acataattcaatgtaatcacaagtgtcggtgtcggacacg 43585999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 12224250 - 12224288
Alignment:
Q  19 cataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||| || |||||||||||||||||||||||||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacg 12224288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 18256016 - 18255974
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||| | |||||||| ||||||||||||||||||||    
T  18256016 atcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 33884077 - 33884115
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  33884077 acatgattcagtgtaattacaagtgtcggtgtcgaacac 33884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 34691841 - 34691799
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||| ||||||||||||||||| | ||||||||||||||||||    
T  34691841 atcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 34714253 - 34714211
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||| ||||||||||||||||| | ||||||||||||||||||    
T  34714253 atcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 2438694 - 2438665
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  2438694 gacacgcctaatccgaggagtgtccgtgct 2438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 12668456 - 12668423
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||| ||||||||||||||    
T  12668456 acataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 26769606 - 26769635
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  26769606 gacacgcctaatccgaggagtgtccgtgct 26769635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 29176528 - 29176487
Alignment:
Q  16 tcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||| |||||| ||||| |||||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacg 29176487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 36756377 - 36756344
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||||||||||| ||||||||||||||    
T  36756377 acataattcagtgtaattataagtgtcggtgtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 37419838 - 37419867
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  37419838 gacacgcctaatccgaggagtgtccgtgct 37419867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 38117195 - 38117154
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    |||||||| ||| |||||||||||||||| ||||||||||||    
T  38117195 atcacatacttcggtgtaattacaagtgttggtgtcggacac 38117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 37419766 - 37419802
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  37419766 atcacaaaattcagtgtaattacaagtgccggtgtcg 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 45563 - 45524
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacg 45524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 498 - 456
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  498 atcacaaaattcagtgtaattacaagtgtcggtgtcggacacg 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 20195 - 20261
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagt 81  Q
    |||||||||||||||||||||||||||||| ||||||     ||| |||||||||||||||||||||    
T  20195 atcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgggacacgcctaatccgaggagt 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 46705 - 46770
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||||    
T  46705 atcacataattcagtgtaattacaaatgtcggtgtc----------gacacgcctaatccgaggagtgtccgtgct 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 23793 - 23829
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  23793 atcacataattcagtgtaattacaagtgtcggtgtcg 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 70304 - 70343
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  70304 acataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 123651 - 123686
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  123651 atcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 92893 - 92935
Alignment:
Q  47 tgtcggacacgtgtgacacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  92893 tgtcggacacctg-gacacgcctaatccgaggagtgtccgtgct 92935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 83186 - 83219
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| |||||||||||    
T  83186 acataattcagtgtaattacaaatgtcggtgtcg 83219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 130505 - 130538
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtg 48  Q
    ||||||||||||||||||||||||||||||||||    
T  130505 atcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 23443 - 23479
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23443 atcacataattcagtgtaattataagtgtcggtgtcg 23479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 23534 - 23570
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  23534 atcacataattcagtgtaattataagtgtcagtgtcg 23570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 3885 - 3849
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3885 atcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 4919 - 4884
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4919 atcacataattcagtgtaattacaagtgttggtgtc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 4856 - 4827
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  4856 gacacgcctaatccgaggagtgtccgtgct 4827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 17785 - 17750
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtc 50  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17785 atcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 8833 - 8863
Alignment:
Q  27 agtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 63799 - 63837
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacac 56  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  63799 acataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 3392 - 3421
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgct 90  Q
    ||||||||||||||||||||||||||||||    
T  3392 gacacgcctaatccgaggagtgtccgtgct 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 13423 - 13460
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  13423 atcacataattcagtgcaattacaagggtcggtgtcgg 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 21904 - 21867
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcgg 52  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  21904 atcacataattcagtgcaattacaagggtcggtgtcgg 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 53203 - 53236
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtg 48  Q
    |||||||||||||||||||||| |||||||||||    
T  53203 atcacataattcagtgtaattataagtgtcggtg 53236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 5058 - 5030
Alignment:
Q  29 tgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacg 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 14553 - 14592
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcggacacg 57  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  14553 atcacataattcagtgtaattacaagt---ggtgtcggacacg 14592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 19598 - 19626
Alignment:
Q  15 atcacataattcagtgtaattacaagtgt 43  Q
    |||||||||||||||||||||||||||||    
T  19598 atcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 25804 - 25768
Alignment:
Q  15 atcacataattcagtgtaattacaagtgtcggtgtcg 51  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  25804 atcacataatttagtgtaattataagtgtcggtgtcg 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 51834 - 51862
Alignment:
Q  15 atcacataattcagtgtaattacaagtgt 43  Q
    |||||||||||||||||||||||||||||    
T  51834 atcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 90
Target Start/End: Original strand, 3024 - 3052
Alignment:
Q  62 acacgcctaatccgaggagtgtccgtgct 90  Q
    |||||||||||||||||||||||||||||    
T  3024 acacgcctaatccgaggagtgtccgtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 174586 - 174546
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    ||||||||||| |||||||||| ||||||||| ||||||||    
T  174586 acataattcagcgtaattacaaatgtcggtgttggacacgt 174546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 180099 - 180059
Alignment:
Q  18 acataattcagtgtaattacaagtgtcggtgtcggacacgt 58  Q
    ||||||||||| |||||||||| ||||||||| ||||||||    
T  180099 acataattcagcgtaattacaaatgtcggtgttggacacgt 180059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 188484 - 188512
Alignment:
Q  61 gacacgcctaatccgaggagtgtccgtgc 89  Q
    |||||||||||||||||||||||||||||    
T  188484 gacacgcctaatccgaggagtgtccgtgc 188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University