View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21631_high_8 (Length: 239)
Name: NF21631_high_8
Description: NF21631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21631_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 26977201 - 26976977
Alignment:
| Q |
18 |
caaatctctatatcacatcttttctctctacacaaactacttcaaacccattttacattattcatattgaaactaagttaccaaaattctcattcaaaca |
117 |
Q |
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| T |
26977201 |
caaatctctatatcacatcttttctctctacacaaactacttcaaactcattttacattattcatattgaaactaagttaccaaaattctcattcaaaca |
26977102 |
T |
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| Q |
118 |
tgtttagttccaaatctgagcaaccacaaaa---tatactccaaatcaagcaagatgacaagttcttctgcagacttcttacaaaagaaagttccatatc |
214 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26977101 |
tgtttagttccaaatctgagcaaccacaaaaaactatactccaaatcaagcaagatgacaagttcttctgcagacttcttacaaaagaaagttccatatc |
26977002 |
T |
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| Q |
215 |
caatccttcttttagagtagctgtt |
239 |
Q |
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||||||||||||||||||||||||| |
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| T |
26977001 |
caatccttcttttagagtagctgtt |
26976977 |
T |
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