View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21632_high_2 (Length: 331)

Name: NF21632_high_2
Description: NF21632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21632_high_2
NF21632_high_2
[»] chr6 (37 HSPs)
chr6 (2-179)||(6330958-6331136)
chr6 (2-179)||(3652408-3652586)
chr6 (2-175)||(20126228-20126402)
chr6 (2-179)||(23986363-23986541)
chr6 (2-179)||(20896734-20896912)
chr6 (2-103)||(14771765-14771866)
chr6 (2-103)||(16519967-16520068)
chr6 (2-104)||(17731159-17731261)
chr6 (2-179)||(2681262-2681440)
chr6 (2-179)||(2720610-2720788)
chr6 (2-179)||(21311893-21312071)
chr6 (2-107)||(17027577-17027682)
chr6 (2-123)||(23776420-23776541)
chr6 (2-107)||(7911873-7911978)
chr6 (2-107)||(7912305-7912410)
chr6 (2-107)||(13492784-13492889)
chr6 (2-103)||(31821738-31821839)
chr6 (13-107)||(9440485-9440579)
chr6 (2-179)||(20850243-20850421)
chr6 (2-107)||(13191559-13191664)
chr6 (2-102)||(9352062-9352162)
chr6 (2-113)||(11062275-11062385)
chr6 (2-176)||(15929507-15929682)
chr6 (2-113)||(27334150-27334261)
chr6 (2-113)||(27394890-27395001)
chr6 (33-177)||(3652903-3653048)
chr6 (2-103)||(9440355-9440456)
chr6 (2-127)||(17851349-17851474)
chr6 (2-103)||(21311514-21311615)
chr6 (2-101)||(20735696-20735795)
chr6 (2-100)||(32292887-32292985)
chr6 (2-100)||(28065884-28065982)
chr6 (5-66)||(10964340-10964401)
chr6 (5-82)||(15929219-15929296)
chr6 (2-123)||(17850897-17851018)
chr6 (5-103)||(2890888-2890985)
chr6 (8-66)||(20732614-20732672)
[»] chr2 (35 HSPs)
chr2 (2-179)||(33174880-33175058)
chr2 (2-179)||(1706964-1707141)
chr2 (2-179)||(18447964-18448142)
chr2 (2-123)||(33174484-33174603)
chr2 (2-123)||(11388168-11388287)
chr2 (2-123)||(18098924-18099045)
chr2 (2-107)||(30966229-30966334)
chr2 (2-117)||(1912510-1912625)
chr2 (4-103)||(1953154-1953253)
chr2 (2-177)||(38898958-38899134)
chr2 (2-176)||(41754214-41754389)
chr2 (2-179)||(29804604-29804782)
chr2 (2-107)||(30966685-30966790)
chr2 (2-179)||(25338043-25338221)
chr2 (2-179)||(25434102-25434280)
chr2 (2-107)||(24818321-24818426)
chr2 (2-94)||(8256534-8256626)
chr2 (2-110)||(16379385-16379493)
chr2 (2-106)||(29259666-29259770)
chr2 (2-101)||(16378938-16379037)
chr2 (2-91)||(8181397-8181486)
chr2 (2-113)||(15619887-15619998)
chr2 (2-104)||(5399863-5399965)
chr2 (2-103)||(16541984-16542085)
chr2 (2-82)||(11394555-11394634)
chr2 (2-93)||(30963766-30963857)
chr2 (41-103)||(30961976-30962038)
chr2 (2-179)||(33770932-33771101)
chr2 (2-107)||(83012-83117)
chr2 (2-66)||(8073928-8073992)
chr2 (41-92)||(9909102-9909153)
chr2 (5-103)||(27882975-27883073)
chr2 (2-100)||(30963309-30963407)
chr2 (2-66)||(13191010-13191074)
chr2 (2-52)||(20502073-20502123)
[»] chr4 (50 HSPs)
chr4 (2-179)||(50398578-50398756)
chr4 (2-107)||(44471365-44471470)
chr4 (3-179)||(50399034-50399210)
chr4 (2-122)||(29628707-29628827)
chr4 (13-123)||(53854858-53854968)
chr4 (2-177)||(4127477-4127654)
chr4 (2-179)||(1645789-1645967)
chr4 (2-103)||(4127929-4128030)
chr4 (2-122)||(3169186-3169306)
chr4 (2-176)||(23942829-23943001)
chr4 (2-179)||(12692039-12692217)
chr4 (2-104)||(14572190-14572292)
chr4 (2-179)||(51331321-51331499)
chr4 (2-127)||(1464122-1464247)
chr4 (2-107)||(23350323-23350428)
chr4 (2-107)||(35871623-35871728)
chr4 (2-107)||(44470914-44471019)
chr4 (2-113)||(21220371-21220482)
chr4 (2-107)||(49998631-49998736)
chr4 (2-121)||(53996155-53996274)
chr4 (2-175)||(9423898-9424072)
chr4 (2-99)||(8467840-8467937)
chr4 (2-122)||(24629473-24629593)
chr4 (2-123)||(21067261-21067382)
chr4 (2-172)||(21067666-21067834)
chr4 (2-107)||(41869913-41870018)
chr4 (2-108)||(24629017-24629126)
chr4 (2-179)||(27026426-27026603)
chr4 (5-103)||(27578952-27579050)
chr4 (2-107)||(14571761-14571866)
chr4 (2-107)||(17028869-17028974)
chr4 (9-100)||(24271597-24271690)
chr4 (2-67)||(7678662-7678727)
chr4 (2-123)||(14351774-14351895)
chr4 (2-91)||(43929003-43929092)
chr4 (2-122)||(13613937-13614057)
chr4 (2-98)||(42838628-42838723)
chr4 (2-179)||(31817438-31817616)
chr4 (2-99)||(53391890-53391987)
chr4 (2-62)||(27029317-27029377)
chr4 (84-124)||(44830977-44831017)
chr4 (69-104)||(35477801-35477836)
chr4 (9-100)||(52048713-52048804)
chr4 (79-117)||(10165939-10165977)
chr4 (2-52)||(17628561-17628611)
chr4 (2-52)||(23943282-23943332)
chr4 (2-52)||(31817892-31817942)
chr4 (79-164)||(33987188-33987274)
chr4 (2-107)||(17029325-17029430)
chr4 (15-95)||(2499647-2499727)
[»] scaffold0047 (2 HSPs)
scaffold0047 (2-123)||(18180-18301)
scaffold0047 (3-123)||(17645-17765)
[»] chr8 (39 HSPs)
chr8 (2-123)||(2044037-2044158)
chr8 (2-179)||(8080388-8080566)
chr8 (2-97)||(17103086-17103181)
chr8 (5-116)||(29971450-29971561)
chr8 (2-179)||(22840575-22840753)
chr8 (2-179)||(28453261-28453438)
chr8 (2-107)||(34308525-34308630)
chr8 (1-179)||(27022383-27022562)
chr8 (8-107)||(34308991-34309090)
chr8 (2-179)||(10844805-10844983)
chr8 (2-179)||(22549041-22549219)
chr8 (2-179)||(41659151-41659328)
chr8 (2-107)||(25147531-25147636)
chr8 (2-179)||(22026301-22026479)
chr8 (2-108)||(33852304-33852410)
chr8 (2-103)||(6464956-6465057)
chr8 (2-122)||(27925879-27925999)
chr8 (2-113)||(12827300-12827411)
chr8 (2-93)||(22705181-22705272)
chr8 (5-107)||(12100687-12100788)
chr8 (2-179)||(27021925-27022107)
chr8 (2-123)||(28375100-28375221)
chr8 (2-179)||(22548595-22548773)
chr8 (2-103)||(27819292-27819393)
chr8 (2-113)||(32292386-32292497)
chr8 (2-67)||(3744673-3744738)
chr8 (2-107)||(25147962-25148067)
chr8 (2-104)||(21316155-21316257)
chr8 (2-99)||(10844661-10844758)
chr8 (6-107)||(25144767-25144868)
chr8 (39-179)||(25307687-25307828)
chr8 (2-103)||(30334954-30335055)
chr8 (2-66)||(1297043-1297107)
chr8 (2-102)||(17429501-17429600)
chr8 (2-107)||(15567602-15567707)
chr8 (2-90)||(15568051-15568139)
chr8 (2-64)||(36968441-36968503)
chr8 (2-58)||(3745145-3745201)
chr8 (2-66)||(41913006-41913070)
[»] chr7 (41 HSPs)
chr7 (201-283)||(5968981-5969063)
chr7 (2-179)||(6747644-6747822)
chr7 (2-123)||(42515523-42515644)
chr7 (2-179)||(2611698-2611876)
chr7 (2-175)||(26957603-26957777)
chr7 (2-104)||(42515090-42515192)
chr7 (2-107)||(9124954-9125059)
chr7 (3-179)||(34405638-34405815)
chr7 (2-107)||(2941803-2941908)
chr7 (2-107)||(11517435-11517539)
chr7 (2-121)||(28495835-28495954)
chr7 (2-108)||(6719120-6719226)
chr7 (2-100)||(25182363-25182461)
chr7 (2-113)||(43233402-43233513)
chr7 (2-123)||(679796-679916)
chr7 (2-103)||(35474167-35474268)
chr7 (2-122)||(2193236-2193356)
chr7 (21-179)||(3305377-3305536)
chr7 (1-103)||(29039065-29039167)
chr7 (2-107)||(5406634-5406739)
chr7 (2-107)||(13125182-13125287)
chr7 (2-103)||(28495654-28495755)
chr7 (2-103)||(36422251-36422352)
chr7 (2-103)||(46425740-46425841)
chr7 (2-107)||(18833281-18833386)
chr7 (2-176)||(2189069-2189244)
chr7 (2-53)||(26421351-26421402)
chr7 (2-67)||(2465959-2466024)
chr7 (2-122)||(33316707-33316828)
chr7 (12-107)||(13124757-13124852)
chr7 (2-113)||(22529281-22529392)
chr7 (2-123)||(29357502-29357622)
chr7 (2-103)||(31406630-31406731)
chr7 (2-58)||(2465777-2465833)
chr7 (2-122)||(9623188-9623308)
chr7 (2-113)||(36015457-36015568)
chr7 (3-67)||(11372486-11372550)
chr7 (2-98)||(20966055-20966151)
chr7 (22-73)||(16811912-16811963)
chr7 (2-113)||(35527167-35527278)
chr7 (2-48)||(6585662-6585708)
[»] chr3 (39 HSPs)
chr3 (2-179)||(30529609-30529787)
chr3 (5-123)||(39640916-39641034)
chr3 (2-177)||(28561670-28561846)
chr3 (2-123)||(20885163-20885283)
chr3 (2-178)||(32227267-32227444)
chr3 (2-123)||(25230751-25230872)
chr3 (2-123)||(25238338-25238459)
chr3 (2-106)||(41472297-41472400)
chr3 (2-179)||(16811303-16811481)
chr3 (2-179)||(39653086-39653264)
chr3 (2-123)||(25230294-25230415)
chr3 (2-123)||(25237881-25238002)
chr3 (2-107)||(31284322-31284427)
chr3 (2-102)||(7493881-7493981)
chr3 (2-179)||(50347668-50347846)
chr3 (2-103)||(32796981-32797082)
chr3 (2-102)||(7477191-7477291)
chr3 (2-94)||(11180080-11180172)
chr3 (5-113)||(14813938-14814046)
chr3 (2-106)||(41473993-41474097)
chr3 (2-124)||(13150145-13150267)
chr3 (2-103)||(25239123-25239224)
chr3 (2-123)||(37045014-37045135)
chr3 (2-179)||(16810847-16811025)
chr3 (2-107)||(25248106-25248211)
chr3 (2-123)||(32227480-32227600)
chr3 (9-179)||(25803057-25803228)
chr3 (2-104)||(8067278-8067380)
chr3 (2-62)||(25238730-25238790)
chr3 (2-66)||(32386780-32386844)
chr3 (2-113)||(2911084-2911195)
chr3 (9-100)||(29224326-29224417)
chr3 (6-104)||(27187380-27187478)
chr3 (2-59)||(13150600-13150657)
chr3 (2-50)||(4067406-4067454)
chr3 (4-66)||(31104008-31104070)
chr3 (43-107)||(12820639-12820703)
chr3 (2-122)||(14820134-14820254)
chr3 (2-93)||(25802594-25802685)
[»] chr1 (36 HSPs)
chr1 (2-179)||(43057569-43057747)
chr1 (2-179)||(30872996-30873175)
chr1 (2-179)||(43057111-43057288)
chr1 (2-103)||(50002753-50002854)
chr1 (2-179)||(16451979-16452157)
chr1 (2-179)||(16461132-16461310)
chr1 (2-179)||(20054126-20054304)
chr1 (2-179)||(20054582-20054760)
chr1 (2-179)||(20055038-20055216)
chr1 (2-179)||(20055494-20055672)
chr1 (2-179)||(20055950-20056128)
chr1 (2-179)||(20056406-20056584)
chr1 (2-179)||(20057309-20057487)
chr1 (2-104)||(35760960-35761062)
chr1 (2-113)||(50002331-50002442)
chr1 (2-179)||(20845707-20845885)
chr1 (2-104)||(35759654-35759756)
chr1 (2-179)||(52250128-52250306)
chr1 (2-102)||(31822709-31822809)
chr1 (2-179)||(12883446-12883624)
chr1 (2-107)||(2328310-2328415)
chr1 (2-107)||(20061237-20061342)
chr1 (2-122)||(38340886-38341006)
chr1 (2-177)||(51372920-51373096)
chr1 (2-113)||(20057765-20057876)
chr1 (5-123)||(10820571-10820689)
chr1 (2-107)||(7548086-7548191)
chr1 (2-104)||(23180728-23180830)
chr1 (2-104)||(46693781-46693884)
chr1 (2-179)||(20056862-20057031)
chr1 (2-108)||(50003121-50003227)
chr1 (2-103)||(2634923-2635024)
chr1 (2-66)||(16907270-16907334)
chr1 (2-67)||(12728026-12728092)
chr1 (2-70)||(2739554-2739622)
chr1 (2-47)||(20060386-20060431)
[»] chr5 (34 HSPs)
chr5 (2-121)||(10927449-10927568)
chr5 (2-179)||(42788692-42788869)
chr5 (2-179)||(20039520-20039698)
chr5 (2-122)||(39146919-39147039)
chr5 (2-121)||(17445501-17445620)
chr5 (2-178)||(10926992-10927170)
chr5 (2-107)||(189063-189168)
chr5 (2-107)||(3887103-3887208)
chr5 (2-179)||(2193738-2193916)
chr5 (2-107)||(2474400-2474505)
chr5 (2-107)||(2473954-2474059)
chr5 (2-107)||(22556531-22556636)
chr5 (2-123)||(27646881-27647002)
chr5 (2-122)||(34867770-34867890)
chr5 (2-117)||(42429131-42429245)
chr5 (2-104)||(1821904-1822006)
chr5 (2-103)||(2058702-2058803)
chr5 (2-103)||(8391368-8391468)
chr5 (2-107)||(22556964-22557069)
chr5 (2-104)||(8642080-8642182)
chr5 (2-123)||(11160727-11160848)
chr5 (1-179)||(4658038-4658216)
chr5 (2-104)||(3886647-3886749)
chr5 (2-100)||(16370754-16370852)
chr5 (2-179)||(34371534-34371712)
chr5 (2-179)||(34371990-34372168)
chr5 (2-113)||(21886192-21886303)
chr5 (2-120)||(5066937-5067055)
chr5 (2-116)||(15513058-15513173)
chr5 (22-107)||(22975076-22975161)
chr5 (2-123)||(18304410-18304531)
chr5 (33-92)||(29680177-29680236)
chr5 (2-107)||(5549339-5549445)
chr5 (2-64)||(24182291-24182353)
[»] scaffold0168 (1 HSPs)
scaffold0168 (2-179)||(2664-2842)
[»] scaffold0022 (2 HSPs)
scaffold0022 (2-107)||(162724-162829)
scaffold0022 (3-66)||(69862-69925)
[»] scaffold0020 (1 HSPs)
scaffold0020 (2-107)||(107509-107614)
[»] scaffold0005 (2 HSPs)
scaffold0005 (2-104)||(245084-245186)
scaffold0005 (2-107)||(245510-245615)
[»] scaffold0040 (1 HSPs)
scaffold0040 (2-107)||(2256-2361)
[»] scaffold0322 (2 HSPs)
scaffold0322 (2-107)||(18961-19066)
scaffold0322 (39-106)||(18204-18271)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-107)||(105715-105820)
[»] scaffold0007 (1 HSPs)
scaffold0007 (2-107)||(142320-142425)
[»] scaffold0243 (1 HSPs)
scaffold0243 (2-179)||(1142-1320)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-107)||(10295-10400)
[»] scaffold0499 (1 HSPs)
scaffold0499 (2-108)||(2097-2203)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-124)||(154735-154857)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-113)||(23662-23773)
[»] scaffold0333 (2 HSPs)
scaffold0333 (2-122)||(4541-4661)
scaffold0333 (39-122)||(4996-5079)
[»] scaffold0101 (1 HSPs)
scaffold0101 (2-102)||(45387-45486)
[»] scaffold0664 (1 HSPs)
scaffold0664 (2-104)||(4028-4130)
[»] scaffold0557 (2 HSPs)
scaffold0557 (54-123)||(729-798)
scaffold0557 (2-57)||(2150-2205)
[»] scaffold1138 (1 HSPs)
scaffold1138 (33-71)||(774-812)


Alignment Details
Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 6330958 - 6331136
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  6330958 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccatctcattccgatgtgat 6331057  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || | | ||||| |||||||||  || | |||||||| ||||||| || || | | |||||||||| ||||||||||||    
T  6331058 tcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactccccaccctcgtcagcc 6331136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 3652586 - 3652408
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||||||||||||||||    
T  3652586 ttgttgatataggtagtatcagacaattcttataagccttccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccgatgtgat 3652487  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | ||||||||  |||||| || || ||| |||||||||||||||| ||||||    
T  3652486 tcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccactccccgccctcatcagcc 3652408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 20126228 - 20126402
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| || || | |||||| ||||||||||||||||||    
T  20126228 ttgttgatataggtagtatcaaaccattcttataagccttccttcaaccatgtagtctcatacctacacagccttaggatccctctcattccgatgtgat 20126327  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtc 175  Q
    |||| | ||||| ||||||||   || | |||||||| ||||||| || || | | |||||||||||||||||||    
T  20126328 tcagcttgtctagaagttgtcaggagccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtc 20126402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 23986363 - 23986541
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||| || ||||| ||||||||||||||||||    
T  23986363 ttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctcattccgatgtgat 23986462  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | |||||||| ||||||| || || ||| |||||||||||||||||||||||    
T  23986463 tcggttcctctagaagctgtcgggagccgctcattgtcatgccttgtgcaccgacgaccactccccgccctcgtcagcc 23986541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20896734 - 20896912
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||    
T  20896734 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctaaggatccctctcattccgatgtgat 20896833  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || | | ||||| |||||||||  || | |||||||| ||||||| || |  | | ||||||| ||| |||||||||||    
T  20896834 tcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaacggcgaccactctccgtcctcgtcagcc 20896912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 14771765 - 14771866
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||| |||||||| ||||| |||||||||||  |||||    
T  14771765 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacctacacggcttcgggatccctctcattccggcgtgat 14771864  T
Q  102 tc 103  Q
    ||    
T  14771865 tc 14771866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 16520068 - 16519967
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||||||||||||||||    
T  16520068 ttgttgatataggtagtaccaaacaaatctcataagccttccttcgaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgat 16519969  T
Q  102 tc 103  Q
    ||    
T  16519968 tc 16519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 17731159 - 17731261
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||||  |||| |||||||  ||||| |||||||| ||||||||||||||||||    
T  17731159 ttgttgatataggtagtaccaaacaattcttataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgtgat 17731258  T
Q  102 tca 104  Q
    |||    
T  17731259 tca 17731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 2681262 - 2681440
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||| ||||||| ||||||||||| |||||||||| |||||||||  |||| || ||||| ||||| |||||| | ||||||||||| ||||||    
T  2681262 ttgttgatatgggtagtaccaaacaattcttataagtcttcattcaaccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtgtgat 2681361  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||  ||||   || | ||||||||  |||||| ||||| | | |||||||||||||||||||||||    
T  2681362 tcggttcctctagaaactgtcaggagccgctcattgtcgtgccttgtgtaccggcgaccactccccgccctcgtcagcc 2681440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 2720610 - 2720788
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||  ||| | |  ||||| ||||||||||| | ||||    
T  2720610 ttgttaatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacctgcacgaccttgggatccctctcattccggtatgat 2720709  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |  ||||||||| ||| ||||  ||||| ||||||||  || ||| || || | | |||||||||||||||||||||||    
T  2720710 ttggttcgtctagaagctgtccgaagtcgctcattgtcgtgacttgtgcaccggcgaccactccccgccctcgtcagcc 2720788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 21312071 - 21311893
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| ||||||||||||||  ||||||||||||  || || ||| || | ||||||||| | ||||||    
T  21312071 ttgttgatataggtagtacctaacaattcttataagccttccttcaaccatgcagtctcatacctgcacagcctcatgaaccctctcattctggtgtgat 21311972  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| | || ||| | |||  |||| ||||||||| |||||| || |||| | |||||| ||||||||||||||||    
T  21311971 tcagttcctttagaagctatcgggagtcgctcattgttgtgccttgtgcactggcgaccacttcccgccctcgtcagcc 21311893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 17027577 - 17027682
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| || ||||| ||||||||||||||||||    
T  17027577 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgat 17027676  T
Q  102 tcagtt 107  Q
    | ||||    
T  17027677 ttagtt 17027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 23776541 - 23776420
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| | ||| |||||||  |||||||||||  |||||    
T  23776541 ttgttgatataggtagtaccagacgattcttataagtcttccttcaaccatgtagtcccatacctacaaggcctcaggatacctctcattccggcgtgat 23776442  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||||||| |||| ||| |||||    
T  23776441 tcagttcctctagaagctgtcg 23776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 7911978 - 7911873
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||  ||||  ||||||  ||||| ||  |||| ||||||||||||||||||    
T  7911978 ttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgcagtcctatacctgcacggcctcgagatccctctcattccgatgtgat 7911879  T
Q  102 tcagtt 107  Q
    ||||||    
T  7911878 tcagtt 7911873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 7912410 - 7912305
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||||||  |||| |||||||  ||||| ||  |||| ||||||||||||||||||    
T  7912410 ttgttgatataggtagtaccaaacaattcatataagttttccttcaaccatgcagtcccatacctgcacggcctcgagatccctctcattccgatgtgat 7912311  T
Q  102 tcagtt 107  Q
    ||||||    
T  7912310 tcagtt 7912305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 13492889 - 13492784
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||| | ||||| ||||||||||||||  ||||||||||||  || || ||||||||  |||||||||||| ||||    
T  13492889 ttgttgatataggtagtaccaaacaattattataagccttccttcaaccatgcagtctcatacctgcacagcctcaggatccttctcattccgatatgat 13492790  T
Q  102 tcagtt 107  Q
    ||||||    
T  13492789 tcagtt 13492784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 31821738 - 31821839
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| |||| |||||| |||||  ||||||||||||| |||||||||||||| | ||| ||| |||| ||||||||||||||||||    
T  31821738 ttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctctcattccgatgtgat 31821837  T
Q  102 tc 103  Q
    ||    
T  31821838 tc 31821839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 9440485 - 9440579
Alignment:
Q  13 ggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 107  Q
    ||||||| ||||||||||| ||||| |||| |||||||||  |||| |||||||  ||| |||||||||| ||||||||||||||||||||||||    
T  9440485 ggtagtaccaaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgtgattcagtt 9440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 20850421 - 20850243
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| ||| || | ||||||||||| ||||||    
T  20850421 ttgttgatataggtagtacaaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtgtgat 20850322  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||| ||||||||||||||    
T  20850321 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagcc 20850243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 13191559 - 13191664
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||| |  |  | |||||| ||||||||||||||||||    
T  13191559 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctacatagtcttaggatccctctcattccgatgtgat 13191658  T
Q  102 tcagtt 107  Q
    | ||||    
T  13191659 ttagtt 13191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 9352162 - 9352062
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||| | | |||||||| ||||| ||||| |||||||||||||| || || |||||||| |||||||| |||||||||    
T  9352162 ttgtttatataggtagtaccaaacaaatattataagtctcccttcgaccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgtgat 9352063  T
Q  102 t 102  Q
    |    
T  9352062 t 9352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 11062385 - 11062275
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  ||||| |||| ||||| |||||||||||||| |||| ||||||||| || || |||||||| |||||||  |||||||||    
T  11062385 ttgttgatataggtagtacaaaacacttcttataagccttccttcaaccatgtagtttcatacctacacagcctcaggatc-ctctcatgtcgatgtgat 11062287  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  11062286 tcggttcctcta 11062275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 15929682 - 15929507
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| ||||| |||| ||||||||| |||||  |||| || | ||| | ||||||||||| |||| ||||||||    
T  15929682 ttgttgatataggtagtaccaaataattcttataagccttcattcaaccatgtagtccaatacatacaaggcattaggatctctcttattctgatgtgat 15929583  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtca 176  Q
    ||  ||| |||| ||||||||   || | |||||||| |||||||||| ||  || ||||| ||| ||||||||||    
T  15929582 tcgattcatctagaagttgtccggagccgctcattgtcatgccttatgcaccaacgaccacacccggccctcgtca 15929507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 27334261 - 27334150
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||  |||||||  ||| | |||||| | ||||| ||||| ||||||    
T  27334261 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcgttccggtgtgat 27334162  T
Q  102 tcagttcgtcta 113  Q
    ||||||| ||||    
T  27334161 tcagttcctcta 27334150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 27395001 - 27394890
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||  |||||||  ||| | |||||| | ||||| ||||| ||||||    
T  27395001 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcgttccggtgtgat 27394902  T
Q  102 tcagttcgtcta 113  Q
    ||||||| ||||    
T  27394901 tcagttcctcta 27394890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 3653048 - 3652903
Alignment:
Q  33 ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaagtc-ct 131  Q
    ||||| |||| |||||||||  |||| |||||||| || || |||||||| ||||||||||||||||| || |||| |||| ||| |||||  || | ||    
T  3653048 ataagccttcgttcaaccatgcagtcccatacctacacagcctcaggatccctctcattccgatgtgagtcggttcatctagaagctgtcgggagccgct 3652949  T
Q  132 cattgttatgccttatgtactgacaaccactccccgccctcgtcag 177  Q
    ||||||  |||||| || || | | |||||||||||||||||||||    
T  3652948 cattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcag 3652903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 9440355 - 9440456
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| | ||||||||| |||||  ||| |||||||||  |||  |||||||  ||| |||||||||| ||||||||||||||||||    
T  9440355 ttgttgatataagtagtaccgaacaattcttataagctttcattcaaccatgcagttccatacctgcacgacttcaggatccctctcattccgatgtgat 9440454  T
Q  102 tc 103  Q
    ||    
T  9440455 tc 9440456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 17851474 - 17851349
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| ||||||  ||| ||||| |||| || ||||||  |||| ||||| |  ||||| || ||||| ||||||||||| ||||||    
T  17851474 ttgttgataaaggtagtaccaaacatatcttataagccttcttttaaccatgcagtcccatacttgcacggcctcgggatccctctcattccggtgtgat 17851375  T
Q  102 tcagttcgtctaaaagttgtcgaaag 127  Q
    || ||||||||| |||||||| ||||    
T  17851374 tcggttcgtctagaagttgtctaaag 17851349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 21311615 - 21311514
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| || |||||| || ||||||||||| ||||| ||||||||||||||  |||| ||||| | |||||| ||| || | ||||||||||||||||||    
T  21311615 ttgtttatctaggtaataccaaacaattcttataaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgtgat 21311516  T
Q  102 tc 103  Q
    ||    
T  21311515 tc 21311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 20735795 - 20735696
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||||||||||||||| ||||| |||||| ||| ||| ||||| |||||||| || |  ||| |||| ||||||||  ||||||||    
T  20735795 ttgttgatataagtagtatcaaacaattcttataagccttcctacaatcatgtagtcacatacctacacagtctcaagatccctctcattatgatgtgat 20735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32292985 - 32292887
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||||| ||||||||||| ||||||||||| ||||| |||| |||||||||  ||||||||||||  |||   | ||||| ||||||||||| ||||||    
T  32292985 ttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatttctctcattccaatgtga 32292887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 28065884 - 28065982
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||||| || ||||| ||||||||||| |||||  ||| ||||| |||| ||||||||  ||| ||| | | |||||| |||||||||||||||||    
T  28065884 ttgttgatagagatagtaccaaacaattcttataagctttcattcaatcatacagtctcatttctacacgaccttaggatccctctcattccgatgtga 28065982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 10964401 - 10964340
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||||| |||||| |||||||||||  |||||||| |||| |||||| ||||||||||||    
T  10964401 ttgatatatgtagtaccaaacaattcttgtaagtctttcttctaccatacagtctcatacct 10964340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 15929296 - 15929219
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatc 82  Q
    |||||||||| | || ||||||||||| |||||  || |||||||| | |||||||||||||| ||||| ||||||||    
T  15929296 ttgatataggcattaccaaacaattcttataagcttttcttcaaccttgtagtctcatacctaaacggcctcaggatc 15929219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 17851018 - 17850897
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| ||||||  ||| || ||  ||| || ||||||  |||| ||||| |  ||| | |||||||| ||||||||||| ||||||    
T  17851018 ttgttgataaaggtagtaccaaacatatcttatcagcattcttttaaccatgcagtcccatacttgcacgacctcaggatccctctcattccggtgtgat 17850919  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || ||||||||| |||||||||    
T  17850918 tcggttcgtctagaagttgtcg 17850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 2890888 - 2890985
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 103  Q
    ||||||||||||||  | ||||||||| ||||  ||||||||||||||  |||| |||||||  ||||| || ||||| |||||||||  |||||||||    
T  2890888 ttgatataggtagtccctaacaattcttataaaccttccttcaaccatgcagtcccatacctgcacggcctcgggatc-ctctcattctaatgtgattc 2890985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 20732672 - 20732614
Alignment:
Q  8 atataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||||||||| |||| |||||| ||||| |||||| ||||||| ||||| |||||||    
T  20732672 atataggtagtaccaaataattcttataagccttcctacaaccatgtagtcacatacct 20732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 33175058 - 33174880
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  33175058 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattccgatgtgat 33174959  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || | | ||||| |||||||||  || | |||||||| ||||||| || || | | |||||||||||||||||||||||    
T  33174958 tcggcttgtctagaagttgtcgggagccactcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagcc 33174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 1707141 - 1706964
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||| || |  |||||||| ||||||||||||||||||    
T  1707141 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggatc-ctctcattccgatgtgat 1707043  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| || ||||||  || | ||||||||  |||||| || || ||| |||||||||||||||||| ||||    
T  1707042 tcggttcctctagaaattgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccactccccgccctcgttagcc 1706964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 18447964 - 18448142
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| | |||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||| ||||| |||||||| || |||||||||||||||    
T  18447964 ttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcattccgatgtgat 18448063  T
Q  102 tcagttcgtctaaaagttgtc-gaaagtcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||||||| |||| | ||   ||||||||  |||||| || || | | ||||||||||||||||| |||||    
T  18448064 tcggttcctctaaaagctgtcgggaaccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgccagcc 18448142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 33174603 - 33174484
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||  | ||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  33174603 ttgttgatataggtagtaccaaacaattcttataagccttccttcaac--tgtagtcccatacctacacggcatcaggatccctctcattccgatgtgat 33174506  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || ||||||||| ||| |||||    
T  33174505 tcggttcgtctagaagctgtcg 33174484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 11388287 - 11388168
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||| |  ||||  ||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  11388287 ttgttgatataggtagtaccaaacaattttt-taagcattccttcaaccatgtagtctcatacctacacggcatcaggatc-ctctcattccgatgtgat 11388190  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| ||||||||||||||    
T  11388189 tcggttcctctaaaagttgtcg 11388168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 18098924 - 18099045
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  | ||||||||||| |||||||||||||| ||||| |||||||  ||||||||||||||||||    
T  18098924 ttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgtagtctcatacctacacggcctcaggattcctctcattccgatgtgat 18099023  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| |||| ||| |||||    
T  18099024 tcggttcctctataagctgtcg 18099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 30966334 - 30966229
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||||||| |||||| |||||||| |||||||||||||| |||    
T  30966334 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattccgatgcgat 30966235  T
Q  102 tcagtt 107  Q
    ||||||    
T  30966234 tcagtt 30966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1912625 - 1912510
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||| ||| | ||||||||| |||||||||||||| |   | |||||||| ||||||||||||||||||    
T  1912625 ttgttgatataggtagtaccaaacaattcttataaatctactttcaaccatgtagtctcatacctacataacctcaggatccctctcattccgatgtgat 1912526  T
Q  102 tcagttcgtctaaaag 117  Q
    ||||||| ||||||||    
T  1912525 tcagttcctctaaaag 1912510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 1953253 - 1953154
Alignment:
Q  4 gttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 103  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||||||  ||| |||||||||| ||||||||||||||||||||    
T  1953253 gttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctctcattccgatgtgattc 1953154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 38898958 - 38899134
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||   |||||||||||| |||||| ||||||| ||||| ||| |||| ||||| ||||||||||||    
T  38898958 ttgttgatataggtagtaccaaacaattcttataagctctccttcaaccatgtagtctgatacctacacggcctcaagatcactctccttccgatgtgat 38899057  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcag 177  Q
    |  | | ||||| |||||||||  || | |||||| | ||| |||||| ||  || |||||||||||||||||||||    
T  38899058 ttggcttgtctagaagttgtcgggagccactcattttcatgtcttatgcaccaacgaccactccccgccctcgtcag 38899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 41754389 - 41754214
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||  ||||||||||||  ||||| ||| || | ||||||||||| ||||||    
T  41754389 ttgttgatatagatagtaccaaacaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaagaaccctctcattccggtgtgat 41754290  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtca 176  Q
    ||||||| |||| ||| ||||   || | ||||||||  |||||| || || | | ||||||||||||||||||||    
T  41754289 tcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtca 41754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 29804782 - 29804604
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| || ||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||||||||    
T  29804782 ttgttgatataggtagtacccaacaattcttataagcctgccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgtgat 29804683  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| ||| |||||  || | |||||| |  |||||| || || | | ||||||||||| |||||||||||    
T  29804682 tcgattcctctagaagctgtcgggagccgctcattatcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcc 29804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 30966790 - 30966685
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||||||  |||| ||||| | |||||| |||||||| |||||||||||||| |||    
T  30966790 ttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccgatgcgat 30966691  T
Q  102 tcagtt 107  Q
    ||||||    
T  30966690 tcagtt 30966685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 25338043 - 25338221
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| ||||||||||||||  |||| |||||||  ||| | |||||| | ||||||||||| ||||||    
T  25338043 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgcagtcccatacctgcacgacctcaggaaccctctcattccggtgtgat 25338142  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||| ||||||||||||||    
T  25338143 tcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagcc 25338221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 25434102 - 25434280
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||||||||||  |||| ||||||   ||||| |||||||| ||||||||||| ||||||    
T  25434102 ttgttgataaaggttgtatcaaacaattcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggatccctctcattccggtgtgat 25434201  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||||| || ||| ||||   || | ||||||||  |||||| || || | |  ||||||||||||||||||||||    
T  25434202 tcggttcgtttagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcggccactccccgccctcgtcagcc 25434280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 24818426 - 24818321
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||||| ||||| ||||||| ||||||  |||| ||||| |  ||||| |||||||| ||||||||||||||||||    
T  24818426 ttgttgatataggtagtactaaacaattcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgat 24818327  T
Q  102 tcagtt 107  Q
    ||||||    
T  24818326 tcagtt 24818321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 8256626 - 8256534
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 94  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||||| |||| |||||||||||    
T  8256626 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcttcaagatccctctcattccg 8256534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 16379493 - 16379385
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||| |||||||  ||||| || ||||| |||||||||| || ||||    
T  16379493 ttgttgatataggtagtaccaaacaattcgtataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatccctctcattccaatttgat 16379394  T
Q  102 tcagttcgt 110  Q
    || ||||||    
T  16379393 tcggttcgt 16379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 29259666 - 29259770
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| ||||||||| | ||||| ||||||||||||||  |||| ||||| | |||||  |||||||| ||||||||||||||||||    
T  29259666 ttgttgatatatgtagtaccaaacaattttaataagccttccttcaaccatgcagtcccatacttgtacggtctcaggatccctctcattccgatgtgat 29259765  T
Q  102 tcagt 106  Q
    |||||    
T  29259766 tcagt 29259770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 16379037 - 16378938
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||  |||||||||| |  ||||| || | ||| ||||||||||| ||||||    
T  16379037 ttgttgatataggtagtatcaaacaattcgtataagacttccttcaaccatgcagtctcatacttgcacggcctcggaatccctctcattccggtgtgat 16378938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 8181397 - 8181486
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcatt 91  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||| | |||| |||||||||| ||  || ||||| ||||||||    
T  8181397 ttgttgatataggtagtaccaaacaattcttaaaagtcttccttcaaccacaaagtcccatacctataaggtctcgggatccctctcatt 8181486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 15619998 - 15619887
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  | |||||||| ||  |||||||||| |  ||||| || ||||| ||||||||| ||||| ||    
T  15619998 ttgttgatataggtagtaccaaacaattcttataagcttgccttcaactatgcagtctcatacttgcacggcatcgggatccctctcattctgatgtaat 15619899  T
Q  102 tcagttcgtcta 113  Q
    || |||||||||    
T  15619898 tcggttcgtcta 15619887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 5399863 - 5399965
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| || |||| ||||||| | || ||||| |  ||| | ||| |||| ||||||||||||||||||    
T  5399863 ttgttgatataggtagtaccaaacaattcttataagcctcccttaaaccatacactcccatacttgcacgacctcaagatccctctcattccgatgtgat 5399962  T
Q  102 tca 104  Q
    |||    
T  5399963 tca 5399965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 16542085 - 16541984
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||| | |||||||||||||||||||| |||  ||||||||| || |||   ||||| || |||||| ||||||||    
T  16542085 ttgttgatataggtagtacaaaacaattattataagtcttccttcaaccatgtagagtcatacctacacagctctgggatccctatcattctgatgtgat 16541986  T
Q  102 tc 103  Q
    ||    
T  16541985 tc 16541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 11394634 - 11394555
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatc 82  Q
    |||||||||||||||||| ||||||||| |  ||||  ||||||||||||| |||||||||||||| ||||| ||||||||    
T  11394634 ttgttgatataggtagtaccaaacaattttt-taagcattccttcaaccatgtagtctcatacctacacggcatcaggatc 11394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 30963766 - 30963857
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattcc 93  Q
    |||||||||||||||| | || |||||||| |||||| |||||||||||||  | |||| |||||  ||||||||| |||| ||||||||||    
T  30963766 ttgttgatataggtagaaccatacaattcttataagttttccttcaaccatgcattctcttacctgcacggcttcatgatccctctcattcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 30961976 - 30962038
Alignment:
Q  41 tccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 103  Q
    ||||||||||||  | || |||||||| |||||||||||||||||||||||| ||||||||||    
T  30961976 tccttcaaccatgcaatcccatacctacacggcttcaggatctctctcattctgatgtgattc 30962038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 33771101 - 33770932
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||| |||||||| |  |||| ||||||         |||||| | ||||||||||| ||||||    
T  33771101 ttgttgatataggtagtaccaaacaattcttataagcctttcttcaaccctgcagtcccatacc---------tcaggaaccctctcattccggtgtgat 33771011  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  33771010 tcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 33770932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 83117 - 83012
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||||||||| ||||| ||||| |||||  | ||||||||||| |||||||||||||  ||    |||||||| |||||||| ||| |||||    
T  83117 ttgttggtataggtagtaccaaacgattcttataagcataccttcaaccatgtagtctcatacctgcacaatctcaggatccctctcatttcgacgtgat 83018  T
Q  102 tcagtt 107  Q
    ||||||    
T  83017 tcagtt 83012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 8073992 - 8073928
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||| | |||||||    
T  8073992 ttgttggtataggtagtaccaaacaattcttataagtctcccttcaaccttatagacccatacct 8073928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 9909153 - 9909102
Alignment:
Q  41 tccttcaaccatatagtctcatacctatacggcttcaggatctctctcattc 92  Q
    |||||||||||||||||||||||| ||||||  ||||||||| |||||||||    
T  9909153 tccttcaaccatatagtctcatacttatacgatttcaggatccctctcattc 9909102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 27882975 - 27883073
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 103  Q
    ||||||||| || || ||||||||||| |||||  |||||||||| ||  |||||||||| |  ||||| |||||||| |||||||| || ||||||||    
T  27882975 ttgatatagataataccaaacaattcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggatccctctcatttcggtgtgattc 27883073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 30963309 - 30963407
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||| |||  | ||  |||| | | |||||||| |||| ||||||||| |||||||    
T  30963309 ttgttgatataggtagtacctaacaattcttataagccttccttcaatcatgcattcatatacatgtgcggcttcatgatccctctcattctgatgtga 30963407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 13191074 - 13191010
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||| |||| |||||| ||||||||||| ||||||||||||| ||||||  ||||| ||||||    
T  13191074 ttgttggtatatgtagtaccaaacaattcttataagtcttccttgaaccatgcagtcttatacct 13191010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 20502123 - 20502073
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 52  Q
    ||||||||||||  |||| ||||||||||| ||||| ||||||||||||||    
T  20502123 ttgttgatatagaaagtaccaaacaattcttataagccttccttcaaccat 20502073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 50398578 - 50398756
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||    
T  50398578 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcctatacctacacggcctcaggatccctctcattccgatgtgat 50398677  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || | | ||||| |||||||||  || | |||||||| ||||||| || || | | |||||||||||||||||||||||    
T  50398678 tcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagcc 50398756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 44471365 - 44471470
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  44471365 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgtacggcctcaagatctctctcattccgatgtgat 44471464  T
Q  102 tcagtt 107  Q
    ||||||    
T  44471465 tcagtt 44471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 50399034 - 50399210
Alignment:
Q  3 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 102  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||| || ||||||||||| ||||  |||||||| |||||||||||||||||||    
T  50399034 tgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtaatctcatacctacacggtctcaggatccctctcattccgatgtgatt 50399133  T
Q  103 cagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    | | | ||||| ||||||||  ||| | |||||||| ||||||| || |||| | |||||| ||||||||||||||||    
T  50399134 cggcttgtctagaagttgtcagaagccgctcattgtcatgccttgtgcactggcgaccact-cccgccctcgtcagcc 50399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 29628707 - 29628827
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||    
T  29628707 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatttcgatgtgat 29628806  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  29628807 tcggttcctctagaagctgtc 29628827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 53854858 - 53854968
Alignment:
Q  13 ggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtct 112  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||| ||||||||    
T  53854858 ggtagtaccaaacaattcttataagtcttccttcaaccatatagtctcatacctacactgcttcatgatccctctcattccgatgtgattcggttcgtct 53854957  T
Q  113 aaaagttgtcg 123  Q
    | ||| |||||    
T  53854958 ataagctgtcg 53854968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 4127477 - 4127654
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||| | ||| |||||||| ||||||||||||||||||    
T  4127477 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgtagtcccatacctacatggcctcaggatccctctcattccgatgtgat 4127576  T
Q  102 tcagttcgtc-taaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcag 177  Q
    || |||| || || |||||||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||    
T  4127577 tcggttcctcttagaagttgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcag 4127654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 1645789 - 1645967
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| ||| |||  ||||||||||||||||||    
T  1645789 ttgttgatataggtaataccaaacaattcttataagtcttccttcaaccatgtagtcccatacctacacggcctcaagattcctctcattccgatgtgat 1645888  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  1645889 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 1645967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 4127929 - 4128030
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||| | ||| |||||||| ||||||||||||||||||    
T  4127929 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatatagtctcatgcctacatggcctcaggatccctctcattccgatgtgat 4128028  T
Q  102 tc 103  Q
    ||    
T  4128029 tc 4128030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 3169306 - 3169186
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||| |||||||| ||||| ||| |||  ||||||||||||||||||    
T  3169306 ttgttgatataggtagtaccaaacaatttttataagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgat 3169207  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  3169206 tcggttcctctataagctgtc 3169186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 23942829 - 23943001
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||||||||| ||||  |||||||| |||||  ||||||| ||||||||||||||||||    
T  23942829 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgtagttccatacctacacggccccaggatccctctcattccgatgtgat 23942928  T
Q  102 tcagttcgtctaaaagttgtcgaaagtcctcattgttatgccttatgtactgacaaccactccccgccctcgtca 176  Q
    || |||| |||| ||| ||||  | |  ||||||||  |||||| || || | | ||||||||||||||||||||    
T  23942929 tcggttcctctagaagctgtc--aggagctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtca 23943001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 12692039 - 12692217
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  12692039 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 12692138  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  12692139 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 12692217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 14572190 - 14572292
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||||||||    
T  14572190 ttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctcattccgatgtgat 14572289  T
Q  102 tca 104  Q
    |||    
T  14572290 tca 14572292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 51331321 - 51331499
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| ||| |||  ||||||||||||||||||    
T  51331321 ttgttgatatagatagtaccaaacaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgat 51331420  T
Q  102 tcagttcgtctaaaagttgt-cgaaagtcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || | | ||||| ||||| |  | ||   |||||| | ||||||| || || |||||||||||||||||||| ||||||    
T  51331421 tcggcttgtctagaagttatagggaaccgctcattatcatgccttgtgcaccgacaaccactccccgccctcatcagcc 51331499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 1464247 - 1464122
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||| ||| |||||| || || ||||||||||| ||||   || |||| ||||||||| ||||||||    
T  1464247 ttgttgatataggtagtaccaaacaattcttataagttttctttcaactatgtattctcatacctacacggtcgcatgatccctctcattctgatgtgat 1464148  T
Q  102 tcagttcgtctaaaagttgtcgaaag 127  Q
    || ||||||||||||| |||||||||    
T  1464147 tcggttcgtctaaaaggtgtcgaaag 1464122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 23350323 - 23350428
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||  |||| | ||||| |||||| ||| |||||||||||||||||||||||    
T  23350323 ttgttgatataggaagtaccaaacaattcttataagccttccttcaaccatgcagtcccctacctgtacggcctcaagatctctctcattccgatgtgat 23350422  T
Q  102 tcagtt 107  Q
    ||||||    
T  23350423 tcagtt 23350428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 35871728 - 35871623
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||| ||| ||||||||||  ||||| ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||||||    
T  35871728 ttgttgatataggtggtaccaaacaattcatataagccttccttcaaccatgaagtcccatacctgtacggcctcaggatccctctcattccgatgtgat 35871629  T
Q  102 tcagtt 107  Q
    ||||||    
T  35871628 tcagtt 35871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 44470914 - 44471019
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||| ||||| | ||| || ||| |||||||||||||||||||||||    
T  44470914 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatacagtcacatacttgtacagcgtcatgatctctctcattccgatgtgat 44471013  T
Q  102 tcagtt 107  Q
    ||||||    
T  44471014 tcagtt 44471019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 21220371 - 21220482
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||||||| ||||||||| | ||| ||| |||| ||||||||| ||||||||    
T  21220371 ttgttgatataggtagtaccaaacaattcttataagcattccttcaaccatatagtttcatacctacatggcctcatgatccctctcattctgatgtgat 21220470  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  21220471 tcggttcctcta 21220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 49998736 - 49998631
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| ||| |||| || || | |||||| ||||||||||||||||||    
T  49998736 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcccatgcctacacagccttaggatccctctcattccgatgtgat 49998637  T
Q  102 tcagtt 107  Q
    | ||||    
T  49998636 ttagtt 49998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 53996155 - 53996274
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||| |||| ||| |  || ||||||||  |||||||||||||||||    
T  53996155 ttgttgatataggtagtaccaaacaatttttataagcattccttcaaccatgtagtcccatatctacatagcctcaggatccttctcattccgatgtgat 53996254  T
Q  102 tcagttcgtctaaaagttgt 121  Q
    || |||| ||||||||||||    
T  53996255 tcggttcctctaaaagttgt 53996274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 9423898 - 9424072
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||| | ||||| |||| |||||||||  |||| ||||| |  ||| | |||||||| ||||||||||| ||||||    
T  9423898 ttgttgatataggtagtaccaaacaattattataagccttctttcaaccatgcagtcccatacatgcacgacctcaggatccctctcattccggtgtgat 9423997  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtc 175  Q
    || ||||||||| |||| ||||  || | ||| ||||  |||||| || || ||| |||||||||||||||||||    
T  9423998 tcggttcgtctagaagtcgtcgggagccactctttgtcgtgccttgtgcaccgacgaccactccccgccctcgtc 9424072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 8467840 - 8467937
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 99  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||  || |  |||||||| || |||||| ||||||    
T  8467840 ttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatccctttcattctgatgtg 8467937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 24629473 - 24629593
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||| ||||||  |||| |||||||| ||| | |||||| | ||||||||||| ||||||    
T  24629473 ttgttgatataggtagtaccaaacaattcttataagcattcctttaaccatgcagtcccatacctacacgacctcaggaaccctctcattccggtgtgat 24629572  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  24629573 tcggttcctctagaagctgtc 24629593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21067382 - 21067261
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| |||| |||| | || |||||||||||||||||  |||||||||| |  ||| | || ||||| ||||||||||| ||||||    
T  21067382 ttgttgatatatgtagtaccaaataattattattagtcttccttcaaccatgcagtctcatacatgcacgacctcgggatccctctcattccggtgtgat 21067283  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||  |||||||| |||||||||    
T  21067282 tcgattcgtctataagttgtcg 21067261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 21067834 - 21067666
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||  |||| |||||||  ||||| || |||| ||   ||||| | ||||||    
T  21067834 ttgttgatataggtagcaccaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatttc---cattctggtgtgat 21067738  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctc 172  Q
    || ||||||||| || ||||||  || | ||||||||  |||||| || || | | ||||||||||||||||    
T  21067737 tcggttcgtctataatttgtcgggagccgctcattgtcgtgccttctgcaccggcgaccactccccgccctc 21067666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 41870018 - 41869913
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||  |||| ||||  | ||| |  |||||||| |||||| |||||||||||    
T  41870018 ttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctctcactccgatgtgat 41869919  T
Q  102 tcagtt 107  Q
    | ||||    
T  41869918 ttagtt 41869913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 24629017 - 24629126
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtct---tccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgt 98  Q
    |||||||||||||||||| ||||||||||| ||||| ||   ||||| ||||||  |||| |||||||| ||||| |||||| | ||||||||||| |||    
T  24629017 ttgttgatataggtagtaccaaacaattcttataagcctaattcctttaaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtgt 24629116  T
Q  99 gattcagttc 108  Q
    ||||| ||||    
T  24629117 gattcggttc 24629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 27026603 - 27026426
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| | | ||||| |||||||  || | | ||  ||| ||||||||| ||||||||    
T  27026603 ttgttgatataggtagtatcaaacaattcttataagccttccttcaatcgtgtagtcccatacctgcaccg-tccaatatccctctcattctgatgtgat 27026505  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || ||| | ||||||| |  |   |||| |||||||| ||||||| || || ||| |||||||||||  ||||||||||    
T  27026504 tcggtttgcctaaaagctaccaggagtcgctcattgtcatgccttgtgcaccgacgaccactccccgttctcgtcagcc 27026426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 27578952 - 27579050
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 103  Q
    |||||||| |||||| ||||||||||| ||||||||||  |||||||  |||| ||||||||| ||| ||| | |||| |||| |||||||||||||||    
T  27578952 ttgatatatgtagtaccaaacaattcttataagtcttcagtcaaccaagtagtgtcatacctacacgactttaagatccctcttattccgatgtgattc 27579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 14571761 - 14571866
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  | |||||||||||  |||| |||||||| ||||  ||| |||| || |||||  ||||||||    
T  14571761 ttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagatccctttcattatgatgtgat 14571860  T
Q  102 tcagtt 107  Q
    ||||||    
T  14571861 tcagtt 14571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 17028974 - 17028869
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||| | | ||||||||| | || || ||||||||| ||  |||| ||||| |  | |||||||||||| ||||||||||||||||||    
T  17028974 ttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcattccgatgtgat 17028875  T
Q  102 tcagtt 107  Q
    ||||||    
T  17028874 tcagtt 17028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 24271597 - 24271690
Alignment:
Q  9 tataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct--atacggcttcaggatctctctcattccgatgtga 100  Q
    |||||||||||||||| |||||| ||| ||||| ||| |||||| |||||||||||||  | ||| | |||||| | |||||||||||||||||    
T  24271597 tataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcatacctgcacacgacctcaggaaccctctcattccgatgtga 24271690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 7678662 - 7678727
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 67  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||| | ||||||||    
T  7678662 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagccccataccta 7678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 14351895 - 14351774
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| |||| || ||| | ||| ||||||||||||||  || ||||||| |  ||| | |||||||| ||||||||| | ||||||    
T  14351895 ttgttgatatagatagtaccaaaaaactcttacaagccttccttcaaccatgcagactcatacatgcacgacctcaggatccctctcattctggtgtgat 14351796  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || ||| ||||| |||||||||    
T  14351795 tcggtttgtctagaagttgtcg 14351774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 43929003 - 43929092
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcatt 91  Q
    |||||| |||| |||||| |||||||||||  ||||  ||||||| |||| ||||||||||||||  |||||||||||| | ||||||||    
T  43929003 ttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgaccaaatagtctcatacctgcacggcttcaggaaccctctcatt 43929092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 13613937 - 13614057
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||| |||||  |||||||| | |  ||  | || ||||| ||||||||||  ||||||    
T  13613937 ttgttgatataggtggtatcaaacaattcttataagtactccttctaccatggagtctcatgcatgcacaacctctggatccctctcattccattgtgat 13614036  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||  |||||||||||||    
T  13614037 tcggtttatctaaaagttgtc 13614057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 42838723 - 42838628
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgt 98  Q
    |||||||||||||||||| ||||||||| | ||| ||||||||| ||| || ||||||||||| || || |  |||||||| ||||||||| |||||    
T  42838723 ttgttgatataggtagtaccaaacaatttttatacgtcttccttgaactatgtagtctcatacttacacagtctcaggatc-ctctcattctgatgt 42838628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 31817438 - 31817616
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||||||||| ||||||||| | ||||   |||||||||||||  |||||||||| |  ||| | ||| |||| |||| ||| |||||||||    
T  31817438 ttgttggtataggtagtaccaaacaattattataaacgttccttcaaccatgaagtctcatacatgcacgacctcatgatccctcttatttcgatgtgat 31817537  T
Q  102 tcagttcgtctaaaagttgtc-gaaagtcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||   | |||||||| ||||| | ||   |||||||| ||||||| || ||||   ||||||||||| |||||||||||    
T  31817538 tctccttgtctaaaaattgtcgggaaccgctcattgtcatgccttgtgcactggtgaccactccccggcctcgtcagcc 31817616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 53391987 - 53391890
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 99  Q
    |||||||||||| | ||||||||||||| | |||||  || ||||||||||  ||||||||||   |||  ||||| |||||||||||||| ||||||    
T  53391987 ttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcatactcttacaacttcaagatctctctcattctgatgtg 53391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 27029377 - 27029317
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcat 62  Q
    ||||||||||| |||||| |||| |||||| |||||||||||||||| | | |||||||||    
T  27029377 ttgttgatataagtagtaccaaataattcttataagtcttccttcaatcgtgtagtctcat 27029317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 44831017 - 44830977
Alignment:
Q  84 ctctcattccgatgtgattcagttcgtctaaaagttgtcga 124  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  44831017 ctctcattccgatgtgattcggttcatctaaaagttgtcga 44830977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 35477836 - 35477801
Alignment:
Q  69 acggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35477836 acggcctcaggatctctctcattccgatgtgattca 35477801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 52048713 - 52048804
Alignment:
Q  9 tataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||| |||||||||||||||||| |||| | |||||||| | ||  ||| |||||||| |||||| | |||| | |||||||||||| ||||    
T  52048713 tatacgtagtatcaaacaattcttataaattttccttcagctatgcagtttcatacctgtacggccttaggaaccctctcattccgacgtga 52048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 10165977 - 10165939
Alignment:
Q  79 gatctctctcattccgatgtgattcagttcgtctaaaag 117  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  10165977 gatctttctcattccgatgtgattcggttcgtctaaaag 10165939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 17628611 - 17628561
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 52  Q
    |||||| ||||||||||| ||||||||||| ||||| || |||||||||||    
T  17628611 ttgttggtataggtagtaccaaacaattcttataagcctaccttcaaccat 17628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 23943282 - 23943332
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 52  Q
    |||||||||||||||||| |||| | || | ||||||||||||||||||||    
T  23943282 ttgttgatataggtagtaccaaatattttttataagtcttccttcaaccat 23943332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31817892 - 31817942
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 52  Q
    |||||| ||||||||||| | ||||||||| ||||| ||||||||||||||    
T  31817892 ttgttggtataggtagtaccgaacaattcttataagccttccttcaaccat 31817942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 33987188 - 33987274
Alignment:
Q  79 gatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactcc 164  Q
    |||| |||||||||||||||||||||||| | ||| ||| || | | |||| |||||||| ||||||| || |||||| ||||||||    
T  33987188 gatccctctcattccgatgtgattcagtttgcctagaagctgccaagagtcgctcattgtcatgccttgtgcactgacgaccactcc 33987274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 17029430 - 17029325
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||| | | |||||||| |||||| ||  |||| ||||| |  ||| | ||  |||| ||||||||||||||| ||    
T  17029430 ttgttgatataggtagtactaaacaattattacaagtcttcattcaactatgcagtcccatacttgcacgacctctagatccctctcattccgatgtaat 17029331  T
Q  102 tcagtt 107  Q
    ||||||    
T  17029330 tcagtt 17029325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 2499647 - 2499727
Alignment:
Q  15 tagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccga 95  Q
    ||||| ||||||||| | |||||| || ||||||||||  ||||||||||||  |||| || || ||| ||||||||||||    
T  2499647 tagtaccaaacaatttttataagtgttgcttcaaccatgaagtctcatacctgcacggttttagaatccctctcattccga 2499727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 18180 - 18301
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  18180 ttgttgatataggtagtatcaaacaattcttataagtcttccttcaactatgtagtcacatacctacacggcctcaggatccctctcattccgatgtgat 18279  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||||||| |||| ||| |||||    
T  18280 tcagttcctctagaagctgtcg 18301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 17645 - 17765
Alignment:
Q  3 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 102  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||||||||| ||||| |||||||| ||||| |||||||| ||||||||| ||||| |||    
T  17645 tgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattctgatgtcatt 17744  T
Q  103 cagttcgtctaaaagttgtcg 123  Q
    | |||| || | |||||||||    
T  17745 cggttcctcaagaagttgtcg 17765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 2044158 - 2044037
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||||||||||||||||    
T  2044158 ttgttgatataggtagtatcaaacaattcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgat 2044059  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| |||| |||||||||    
T  2044058 tctgttcctctagaagttgtcg 2044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 8080388 - 8080566
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| || ||  ||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  8080388 ttgttgatataggtagtaccaaacaattcttatcagctttccttcaaccatgtagtcccatacctacacggcttcaggatccctctcattccgatgtgat 8080487  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| ||| |||  | || | ||||||||  |||||| || || | | |||||||| ||||||||||||||    
T  8080488 tcagttcctctagaagctgttaagagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagcc 8080566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 17103181 - 17103086
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatg 97  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||||    
T  17103181 ttgttgatataggcagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacctgtacggcctcaggatctctctcattccgatg 17103086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 29971450 - 29971561
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| ||||||||  ||  |||| |||||||||||    
T  29971450 ttgatatagatagtatcaaacaattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggatccttccaattctgatgtgattca 29971549  T
Q  105 gttcgtctaaaa 116  Q
    ||||||||||||    
T  29971550 gttcgtctaaaa 29971561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 22840575 - 22840753
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| |||||||||| ||| ||||| |||||||||||||| |  || |||||||||||||||||||||||||||    
T  22840575 ttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtagtctcatacctacaaagcctcaggatctctctcattccgatgtgat 22840674  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||  |||| ||||| |||  || | |||||| |  || |||||| || | | ||||||||||||||| |||||||    
T  22840675 tcagttactctagaagttatcgggagccgctcattatcgtgtcttatgcaccggcgaccactccccgcccttgtcagcc 22840753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 28453438 - 28453261
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| ||||||||||||| |||||||||| |||||| ||| |||||||||  ||||||||||||  ||| | || ||||| ||||||||||| ||||||    
T  28453438 ttgttaatataggtagtataaaacaattcttataagttttctttcaaccatgaagtctcatacctgcacgacctcgggatccctctcattccggtgtgat 28453339  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |||| || ||||||||||||||  || | ||||||||  |||||| || || | |||||||||||||||||||||||||    
T  28453338 tcag-tcatctaaaagttgtcgggagccgctcattgtcgtgccttgtgcaccggcaaccactccccgccctcgtcagcc 28453261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 34308525 - 34308630
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||| |||| ||||| ||||||||||||||| |||||||||| | |||||| |||||||| || |||||||||||||||    
T  34308525 ttgttgatataggtagtaccaaacagttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggatccctttcattccgatgtgat 34308624  T
Q  102 tcagtt 107  Q
    ||||||    
T  34308625 tcagtt 34308630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 27022383 - 27022562
Alignment:
Q  1 gttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||| |||||||| | ||| ||| |||| |||||||||||||||||    
T  27022383 gttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagtcccatacctacatggcctcaagatccctctcattccgatgtga 27022482  T
Q  101 ttcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||| | || |||| ||| |||||  || | ||||||||  |||||| || || | | ||||||||||| |||||||||||    
T  27022483 ttcggctcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcc 27022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 34308991 - 34309090
Alignment:
Q  8 atataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 107  Q
    |||||||||||| |||||| |||| ||||| ||||||||||||||| |||||||||| | |||||| |||||||| ||||||||||||||||||||||||    
T  34308991 atataggtagtaccaaacagttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggatccctctcattccgatgtgattcagtt 34309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 10844983 - 10844805
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  10844983 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 10844884  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  10844883 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 10844805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 22549041 - 22549219
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||  || || ||||||   ||||||||||| ||||||    
T  22549041 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtgtgat 22549140  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  22549141 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 22549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 41659151 - 41659328
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||  ||| | |||||| | ||||||||||| ||||||    
T  41659151 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacgacatcaggaaccctctcattccggtgtgat 41659250  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | ||||||||  || ||| || || | | |||||||||||||||||||||||    
T  41659251 tcggttcctctagaagctgtcgggagccactcattgtcgtg-cttgtgcaccggcgaccactccccgccctcgtcagcc 41659328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25147636 - 25147531
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||| | ||||||||||| ||||| ||||||||||||||  ||||||||||||| || |  | |||||||||||||||||||||||||    
T  25147636 ttgttgatataggtagcaccaaacaattcttataagccttccttcaaccatgcagtctcatacctacacagtcttaggatctctctcattccgatgtgat 25147537  T
Q  102 tcagtt 107  Q
    | ||||    
T  25147536 ttagtt 25147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 22026479 - 22026301
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||||||  |||| |||||||  ||||| ||| || | ||||||||||| ||||||    
T  22026479 ttgttgatataggtagtaccaaacaattcttataagccttcattcaaccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtgtgat 22026380  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | |||||||| ||||||| || || | | |||||||| ||||||||||||||    
T  22026379 tcggttcctctagaagctgtcaggagccgctcattgtcatgccttgtgcaccggcgaccactcctcgccctcgtcagcc 22026301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 33852304 - 33852410
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||||  ||||  || ||||| ||||||||| | ||||||    
T  33852304 ttgttaatataggtagtaccaaacaattcttataagttttccttcaaccatacagtctcatacctgcacggtctcgggatccctctcattctggtgtgat 33852403  T
Q  102 tcagttc 108  Q
    |||||||    
T  33852404 tcagttc 33852410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 6464956 - 6465057
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||  |||||||| ||||| ||| |||  |||||||||| |||||||    
T  6464956 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagttccatacctacacggcctcatgattcctctcattccaatgtgat 6465055  T
Q  102 tc 103  Q
    ||    
T  6465056 tc 6465057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 27925999 - 27925879
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  27925999 ttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 27925900  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  27925899 tcggttcctctagaagctgtc 27925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 12827300 - 12827411
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||  ||||| |||||||| | ||| |||||||| |||||||||||  |||||    
T  12827300 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccaagtagtcccatacctacaaggcctcaggatccctctcattccggcgtgat 12827399  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  12827400 tcggttcttcta 12827411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 22705272 - 22705181
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattcc 93  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||||| |||  |||| |||||||| |||||||||||||| ||||||||||    
T  22705272 ttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcattcc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 12100788 - 12100687
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||||||||||||| ||||||| ||| |||||  | |||||||||||  |||||||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  12100788 ttgatataggtagtaccaaacaaatcttataagcttgccttcaaccatgcagtctcatacctgtacggcctcaggatct-tctcatttcgatgtgattca 12100690  T
Q  105 gtt 107  Q
    |||    
T  12100689 gtt 12100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 27021925 - 27022107
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc----tcattccgatg 97  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||  ||||| ||||||| | ||| |||||||| |||    |||||||||||    
T  27021925 ttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctctcattcattccgatg 27022024  T
Q  98 tgattcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |||||| | || |||| |||||||||  || | ||||||||  |||||| || ||   | |||||||||| ||||||||||||    
T  27022025 tgattcggctcctctagaagttgtcgggagccactcattgtcgtgccttgtgcacccgcgaccactccccaccctcgtcagcc 27022107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 28375100 - 28375221
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||| ||||||||| ||||||||||| ||||| |||||||||| |||  ||||||||||||  ||||| |||||||| ||||||||  | ||||||    
T  28375100 ttgttgatgtaggtagtaccaaacaattcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattatggtgtgat 28375199  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||  |||||||| ||| |||||    
T  28375200 tcgtttcgtctagaagctgtcg 28375221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 22548595 - 22548773
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||||||||  |||| |||||||  || || |||||| | ||||||||||| ||||||    
T  22548595 ttgttgatataggtagtaccaaacaattcttataaaacttccttcaaccatgcagtcacatacctgcacagcctcaggaaccctctcattccggtgtgat 22548694  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |  |||| |||| ||| ||||   || | ||||||||  |||||| || |||| | |||||||||| ||||| ||||||    
T  22548695 taggttcctctagaagctgtcaggagccgctcattgtagtgccttgtgcactggcgaccactccccaccctcatcagcc 22548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 27819292 - 27819393
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| || || ||||||||||||||  |||||||||| |  | | ||||| |||| ||||||||| ||||||||    
T  27819292 ttgttgatataggtagtaccaaacaattcttattagccttccttcaaccatgaagtctcatacttgcatgacttcatgatccctctcattctgatgtgat 27819391  T
Q  102 tc 103  Q
    ||    
T  27819392 tc 27819393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 32292497 - 32292386
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| |||||  |||||||||||||  |||| ||||| |  ||||| |||||| | ||||||||||| ||||||    
T  32292497 ttgttgatatagatagtaccaaacaattcttataagcattccttcaaccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtgtgat 32292398  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  32292397 tcggttcctcta 32292386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3744738 - 3744673
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 67  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||||||  |||| ||||||||    
T  3744738 ttgttggtataggtagtgtcaaacaattcttataagtcttccttcaaccatgcagtcccataccta 3744673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25148067 - 25147962
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||  | ||||||||||| ||||| ||||||||||| | | |||| |||||||| ||| | || ||||| |||||||||  |||||||    
T  25148067 ttgttgatataggtaagaccaaacaattcttataagccttccttcaacgacacagtcccatacctacacgacctcgggatccctctcattcttatgtgat 25147968  T
Q  102 tcagtt 107  Q
    ||||||    
T  25147967 tcagtt 25147962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 21316155 - 21316257
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||||  ||||   || || ||||||| ||||||||||||  ||||| | |||||| |||||||  |||||||||    
T  21316155 ttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccatacagtctcatacctgcacggccttaggatccctctcatcgcgatgtgat 21316254  T
Q  102 tca 104  Q
    |||    
T  21316255 tca 21316257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 10844661 - 10844758
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 99  Q
    ||||| |||||||||||| ||||||| ||| ||||| ||||||||||||||  |||| |||||||  | ||| |||||| | ||||||||||| ||||    
T  10844661 ttgttaatataggtagtaccaaacaactcttataagccttccttcaaccatgcagtcccatacctgcaaggcctcaggaaccctctcattccggtgtg 10844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 25144868 - 25144767
Alignment:
Q  6 tgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcag 105  Q
    |||||||||||||| ||||||||||| ||||| || ||||||| |||  | || |||||||  ||| | ||  |||||||||||||| ||||||||||||    
T  25144868 tgatataggtagtaccaaacaattcttataagcctgccttcaatcatgcaatcccatacctgcacgacctcgagatctctctcattctgatgtgattcag 25144769  T
Q  106 tt 107  Q
    ||    
T  25144768 tt 25144767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 25307828 - 25307687
Alignment:
Q  39 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaagtc-ctcattgt 137  Q
    ||||||||||||||| ||||||||||||  ||||| |  | ||| ||||||||||  |||||||||||| |||| |||| ||||||||  | ||||||||    
T  25307828 cttccttcaaccatacagtctcatacctgcacggccttggaatcgctctcattccagtgtgattcagtttgtctcaaagctgtcgaaaaccgctcattgt 25307729  T
Q  138 tatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
      || ||| |  || ||| ||||||||| |||||||||||||    
T  25307728 cgtgtcttgtacaccgactaccactcccggccctcgtcagcc 25307687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 30334954 - 30335055
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||||||||||||||||||| | |||||||||| ||||||| |  |||| |||||||  || |  ||||||||  ||| |||||||||||||    
T  30334954 ttgttggtataggtagtatcaaacaatttttataagtcttctttcaaccttgcagtcgcatacctgcacagtctcaggatccatctaattccgatgtgat 30335053  T
Q  102 tc 103  Q
    ||    
T  30335054 tc 30335055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 1297107 - 1297043
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||| ||||||||||| ||||||||||| |||||| || ||||||||||  ||||||||||||    
T  1297107 ttgttggtataggtagtaccaaacaattcttataagttttacttcaaccatgcagtctcatacct 1297043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 17429600 - 17429501
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||| ||  |||| ||||  |  ||||  ||| |||| ||||||||||||||||||    
T  17429600 ttgttgatataggtagtaccaaataatactcataagtcttccttcaacaatgcagtcacatatatgcacggtctcaagatc-ctctcattccgatgtgat 17429502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 15567602 - 15567707
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| |||| ||||| |||||||||||| ||||| |||||||| |||||   |||| |||| |   ||   ||| |||||||||||||||||||||||    
T  15567602 ttgttggtatatgtagtgtcaaacaattcttataagccttccttccaccatgatgtctaatacttgcgcgatgtcaagatctctctcattccgatgtgat 15567701  T
Q  102 tcagtt 107  Q
    ||||||    
T  15567702 tcagtt 15567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 15568051 - 15568139
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcat 90  Q
    ||||||||||||||  || ||||||||| | |||||||||||||||||||   |||| ||||  | |||||  ||||||||||||||||    
T  15568051 ttgttgatataggtcataccaaacaattgttataagtcttccttcaaccaagaagtcacatatttgtacggtctcaggatctctctcat 15568139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 36968441 - 36968503
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatac 64  Q
    ||||||||||| |||| | ||| ||||||| ||||||| ||||||||||||| ||| ||||||    
T  36968441 ttgttgatataagtagcaccaatcaattcttataagtcatccttcaaccatacagtttcatac 36968503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3745201 - 3745145
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtc 58  Q
    |||||| |||||||||||  ||||| |||| |||||| ||||||||||||| |||||    
T  3745201 ttgttggtataggtagtactaaacagttcttataagttttccttcaaccatgtagtc 3745145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 41913070 - 41913006
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||||||||||||| | ||||||||||| ||||| |||| ||||| |||  |||| |||||||    
T  41913070 ttgttgatataggtagcaccaaacaattcttataagccttctttcaaacatgcagtcccatacct 41913006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 5968981 - 5969063
Alignment:
Q  201 tacttttgagattacatggctacatttggccgcaattattttcttcaaaatgaaaaatgacattgtcagaaattattttcttc 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5968981 tacttttgagattacatggatacatttggccgcaattattttcttcaaaatgaaaaatgacattgtcagaaattattttcttc 5969063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 6747644 - 6747822
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||||||||| |||| ||||||||| ||||| |||||||| |||||||||| |||||||    
T  6747644 ttgttgatataggtagtaccaaacaattcttataatccttccttcaaccatgtagtatcatacctacacggcctcaggatccctctcattccaatgtgat 6747743  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |||| | ||||| |||||||||  || | |||||||| ||||||| || || | | ||||||||| |||||||||||||    
T  6747744 tcagcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactccctgccctcgtcagcc 6747822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 42515644 - 42515523
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||| |||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| ||||||||    
T  42515644 ttgttgatataggtagtaccaaacacttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattctgatgtgat 42515545  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || ||||||||| ||| |||||    
T  42515544 tcggttcgtctagaagctgtcg 42515523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 2611698 - 2611876
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| | | | |||||| | ||||||||||||||||||    
T  2611698 ttgttgttatagatagtaccaaacaattcttataagccttccttccaccatatagtctcatacctacatgacctcaggacccctctcattccgatgtgat 2611797  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||| ||||||||||||    
T  2611798 tcagttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagcc 2611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 26957603 - 26957777
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||  |||||||| || || ||| |||| ||||||||||||||||||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatgtgat 26957702  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtc 175  Q
    || |||| |||| |||||||||  || | ||||||||  |||||| || || ||| |||||| ||||||||||||    
T  26957703 tcggttcctctagaagttgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccacttcccgccctcgtc 26957777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 42515192 - 42515090
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||| |||  ||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  42515192 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgat 42515093  T
Q  102 tca 104  Q
    |||    
T  42515092 tca 42515090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 9125059 - 9124954
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||| ||||||| ||||||||||||  ||||| ||| |||||||||||||||||||||||    
T  9125059 ttgttgatataggtagtaccaaacaattcttataagctttcctttaaccatacagtctcatacctgcacggcctcaagatctctctcattccgatgtgat 9124960  T
Q  102 tcagtt 107  Q
    ||||||    
T  9124959 tcagtt 9124954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 34405638 - 34405815
Alignment:
Q  3 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 102  Q
    ||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| | |||||| ||||||||||| |||||||    
T  34405638 tgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggtgtgatt 34405737  T
Q  103 cagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    | |||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  34405738 cggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 34405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 2941803 - 2941908
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| || || ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||| ||||||||    
T  2941803 ttgttgatataggtagtaccaaacaattcttatcagccttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattctgatgtgat 2941902  T
Q  102 tcagtt 107  Q
    ||||||    
T  2941903 tcagtt 2941908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 11517435 - 11517539
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||| ||||  |||| ||||||| |||||| |||||||| ||||||||||||||||||    
T  11517435 ttgttgatataggtagtaccaaacaattcttataagccttccttca-ccatgcagtcccatacctgtacggcctcaggatccctctcattccgatgtgat 11517533  T
Q  102 tcagtt 107  Q
    ||||||    
T  11517534 tcagtt 11517539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 28495954 - 28495835
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | |||| |||| ||||| |||||||||||||| ||||| |||||||| ||||| ||| |||| ||||||||||||||||||    
T  28495954 ttgttgatataggtagtacccaacagttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaagatccctctcattccgatgtgat 28495855  T
Q  102 tcagttcgtctaaaagttgt 121  Q
    ||  ||| |||| |||||||    
T  28495854 tcgattcctctagaagttgt 28495835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 6719120 - 6719226
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||||||||| ||||| |||||||| || || |||||||| |||||||||| |||||||    
T  6719120 ttgttgatataggtagtaccaaacaattcttataagcattccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccaatgtgat 6719219  T
Q  102 tcagttc 108  Q
    || ||||    
T  6719220 tcggttc 6719226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 25182461 - 25182363
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||| |  || |  ||||||||||||||||||||||||||    
T  25182461 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacttgcacagtctcaggatctctctcattccgatgtga 25182363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 43233513 - 43233402
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||| |||||||| ||||| ||| |||| |||||||| || ||||||    
T  43233513 ttgttgatatagatagtaccaaacaattcttataagtcttcctttaaccatacagtcacatacctacacggcctcatgatccctctcatttcggtgtgat 43233414  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  43233413 tcggttcctcta 43233402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 679916 - 679796
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||| ||||||| ||||| ||||||||| |||| || || |||||||| ||| | |||||||| ||||||||| ||||||||    
T  679916 ttgttgatataggtagtaccaa-caattcttataagccttccttcagccatgtactcccatacctacacgacctcaggatccctctcattctgatgtgat 679818  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||||||| |||| ||| |||||    
T  679817 tcagttcctctagaagctgtcg 679796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 35474167 - 35474268
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| ||||||  |||||||||| ||||||||| |||||||||| |||||||||||||| ||| | | |||||| ||||||||||| ||||||    
T  35474167 ttgttgatataagtagtactaaacaattcttataagtctttcttcaaccatgtagtctcatacctacacgacctaaggatccctctcattccggtgtgat 35474266  T
Q  102 tc 103  Q
    ||    
T  35474267 tc 35474268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 2193356 - 2193236
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||  |||||| | ||||||||||| ||||||    
T  2193356 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtgtgat 2193257  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  2193256 tcggttcctctagaagctgtc 2193236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 3305377 - 3305536
Alignment:
Q  21 caaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttg 120  Q
    ||||||||||||||||| |||| ||||||||| ||||| ||||| || ||||| |||||||| | |||||| ||||||||||| |||| |||| ||| ||    
T  3305377 caaacaattctcataagccttcattcaaccatgtagtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggttcctctagaagctg 3305476  T
Q  121 tcgaaag-tcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    |||  || | ||||||||  ||||||||  || | | ||||||| |||||||||||||||    
T  3305477 tcgggagctgctcattgtcgtgccttatccaccggcgaccactctccgccctcgtcagcc 3305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29039065 - 29039167
Alignment:
Q  1 gttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||||||||||||||| |||||||||||  |||| || | ||||||||| ||||| |||| ||| ||||| |||||||  |||||||||||||||||    
T  29039065 gttgttgatataggtagtaccaaacaattcttgtaagcctccattcaaccatgtagtcacatatctacacggcctcaggatgcctctcattccgatgtga 29039164  T
Q  101 ttc 103  Q
    |||    
T  29039165 ttc 29039167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 5406634 - 5406739
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||| || ||||||||||| |||| |||||||||||||||  |||| ||||||   ||| ||| |||||| || |||||||||||||||    
T  5406634 ttgttgatataggtaataccaaacaattcttataaatcttccttcaaccatgcagtcccataccggcacgactttaggatccctatcattccgatgtgat 5406733  T
Q  102 tcagtt 107  Q
    ||||||    
T  5406734 tcagtt 5406739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 13125182 - 13125287
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  | ||| ||| |||| ||||||||||||| ||||    
T  13125182 ttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcagggcctcaagatccctctcattccgatatgat 13125281  T
Q  102 tcagtt 107  Q
    ||||||    
T  13125282 tcagtt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 28495654 - 28495755
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||  |   ||||||||| |||||||||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||||| |||    
T  28495654 ttgttgatataggtaaaactcaacaattcttataagtcttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattccgatgggat 28495753  T
Q  102 tc 103  Q
    ||    
T  28495754 tc 28495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 36422352 - 36422251
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| | |||||| |||||||||||  |||||    
T  36422352 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgat 36422253  T
Q  102 tc 103  Q
    ||    
T  36422252 tc 36422251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 46425841 - 46425740
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||| || ||||||||||| ||||| |||  ||||||||| ||||| |||||||| | ||  |||||||| ||||||||||||||||||    
T  46425841 ttgttgatataggtaataccaaacaattcttataagccttatttcaaccatgtagtcccatacctacatggtctcaggatccctctcattccgatgtgat 46425742  T
Q  102 tc 103  Q
    ||    
T  46425741 tc 46425740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 18833386 - 18833281
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||||  |||||  |||| ||||||||  |||  ||||||| |||||| |||||| | ||||||||||||||||||    
T  18833386 ttgttgatataggtagtactaaacaattcatataagctttccctcaaccatgcagttccatacctgtacggcctcaggaaccctctcattccgatgtgat 18833287  T
Q  102 tcagtt 107  Q
    ||||||    
T  18833286 tcagtt 18833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 2189244 - 2189069
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||  ||||||||||| ||||| |||| |||||||||  |||| || ||||  || || |||||| | ||||||||||| ||||||    
T  2189244 ttgttgatataggtagtgccaaacaattcttataagccttctttcaaccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtgtgat 2189145  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtca 176  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | ||||||||||||||||||||    
T  2189144 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtca 2189069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26421351 - 26421402
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccata 53  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  26421351 ttgttgatataggtagtatcaagcaattcttataagtcttccttcaaccata 26421402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 2466024 - 2465959
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 67  Q
    |||||||||||||||||| ||||||| ||| ||||| |||||||||||||| ||||| ||||||||    
T  2466024 ttgttgatataggtagtaccaaacaactcttataagccttccttcaaccatgtagtcccataccta 2465959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 33316828 - 33316707
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgt-ga 100  Q
    ||||||||||| ||| | |||||||||||| |||| | ||||||||||||| |||||||||||||  ||| | |||  || | |||||||||||||| ||    
T  33316828 ttgttgatataagtattgtcaaacaattcttataatttttccttcaaccatgtagtctcatacctgcacgacatcaaaatttatctcattccgatgtgga 33316729  T
Q  101 ttcagttcgtctaaaagttgtc 122  Q
    ||||||| ||||| ||| ||||    
T  33316728 ttcagtttgtctagaagctgtc 33316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 13124757 - 13124852
Alignment:
Q  12 aggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 107  Q
    |||||||| || |||||||| ||||| ||||||||||||||  |||| |||||||  ||||| ||| |||| |||||||||| || ||||||||||    
T  13124757 aggtagtaccacacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattccaatatgattcagtt 13124852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 22529281 - 22529392
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||| ||||| |||||| |||| ||||| |||||||||||||| ||| | ||||| || | | | |||||||| ||||||||| ||| ||||    
T  22529281 ttgtttatatagatagtaccaaacatttcttataagccttccttcaaccatgtaggcccatacttacatgacctcaggatccctctcattcggatatgat 22529380  T
Q  102 tcagttcgtcta 113  Q
    || |||||||||    
T  22529381 tcggttcgtcta 22529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 29357502 - 29357622
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| ||||| ||||||||||| ||||   |||||||||||||  |||| |||||||  ||| | || ||||  |||||||| || ||||||    
T  29357502 ttgttgatatagttagtaccaaacaattcttataaacattccttcaaccatgcagtcccatacctgcacgacctcgggatacctctcatt-cggtgtgat 29357600  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    ||||||| |||| |||||||||    
T  29357601 tcagttcatctagaagttgtcg 29357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 31406630 - 31406731
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||  | ||||||||||| ||||||| || |||||||||  |||| || | ||  |||||||||||||| ||||||||  ||||||||    
T  31406630 ttgttgatataggtaacaccaaacaattctaataagtcatctttcaaccattcagtcccagatctgcacggcttcaggatccctctcattttgatgtgat 31406729  T
Q  102 tc 103  Q
    ||    
T  31406730 tc 31406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2465833 - 2465777
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtc 58  Q
    |||||||||||||||||| ||||||| ||| ||||| |||||||||||||| |||||    
T  2465833 ttgttgatataggtagtaccaaacaactcttataagccttccttcaaccatgtagtc 2465777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 9623308 - 9623188
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||| |||||  |||||||| | |  ||  | || ||||| ||||||||||  ||||||    
T  9623308 ttgttgatataggtggtatcaaacaattcttataagtactccttctaccatggagtctcatgcatgcacaacctctggatccctctcattccattgtgat 9623209  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||  |||||||||||||    
T  9623208 tcggtttatctaaaagttgtc 9623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 36015457 - 36015568
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| |||||||||||  ||||  |||||||||||||  |||||||||| |  || || |  ||||| ||||||||||| ||||||    
T  36015457 ttgttgatatatgtagtaccaaacaattcttttaagctttccttcaaccatggagtctcatacttgcactgccttgggatccctctcattccggtgtgat 36015556  T
Q  102 tcagttcgtcta 113  Q
    |  |||||||||    
T  36015557 ttggttcgtcta 36015568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 11372550 - 11372486
Alignment:
Q  3 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 67  Q
    ||||| || |||||||| ||||||||||| ||||| ||||||||||||||| | | |||||||||    
T  11372550 tgttggtacaggtagtaccaaacaattcttataagccttccttcaaccatacaatttcataccta 11372486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 20966151 - 20966055
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgt 98  Q
    |||||| |||||||| ||  ||| |||||| ||||||| |||||||| |||  ||||||||||||| | ||| ||| || | |||||||||||||||    
T  20966151 ttgttggtataggtattacaaaataattcttataagtcatccttcaatcatgcagtctcatacctagatggcctcaagaccactctcattccgatgt 20966055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 16811912 - 16811963
Alignment:
Q  22 aaacaattctcataagtcttccttcaaccatatagtctcatacctatacggc 73  Q
    |||||||||| |||||  ||||||||||||| |||||||||||||| |||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcatacctacacggc 16811963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 35527167 - 35527278
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||| | ||||||||||| ||||| |||| ||||||||   |||| ||||  |  ||| | || ||||| |||||||| || ||||||    
T  35527167 ttgttgatataggtagcaccaaacaattcttataagccttctttcaaccaaccagtcccatatttgcacgacctcgggatccctctcatttcggtgtgat 35527266  T
Q  102 tcagttcgtcta 113  Q
    || |||||||||    
T  35527267 tcggttcgtcta 35527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 6585708 - 6585662
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaa 48  Q
    |||||||||||||||||| ||||||||| | |||||||||| |||||    
T  6585708 ttgttgatataggtagtaccaaacaatttttataagtcttctttcaa 6585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 30529787 - 30529609
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| ||||| ||| |||||||||| |||||||||||||| || || |||||||| ||||||||||||||||||    
T  30529787 ttgttgatataggtagtaccaaaaaattcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgat 30529688  T
Q  102 tcagttcgtctaaaagttgtcgaaag-tcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| |||||||||  || | || |||||  |||||| || |||||| |||||||  ||||||||||||||    
T  30529687 tcagttcctctagaagttgtcgggagctgcttattgtcgtgccttgtgcactgacgaccactcatcgccctcgtcagcc 30529609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 39641034 - 39640916
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||     
T  39641034 ttgatataggtagtaccaaacaactcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatctctctcattctgatgtgattcg 39640935  T
Q  105 gttcgtctaaaagttgtcg 123  Q
     ||| |||||||| |||||    
T  39640934 attcttctaaaagctgtcg 39640916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 28561846 - 28561670
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  28561846 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 28561747  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcag 177  Q
    ||||||| |||| ||||||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||    
T  28561746 tcagttcctctagaagttgtcagtagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcag 28561670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 20885163 - 20885283
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||| | ||| |||| |||||||| |||||||||    
T  20885163 ttgttgatataggtagtatcaaacaattcttataagtcttccttcaaccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgtgat 20885262  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  |||| |||| |||||||||    
T  20885263 t-ggttcctctagaagttgtcg 20885283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 32227267 - 32227444
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| | |||||| |||||||||||  |||||    
T  32227267 ttgttaatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgat 32227366  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagc 178  Q
    || |||| |||| ||||||| |  || | ||||||||| |||||| || |||| | ||||||||||||||||||||||    
T  32227367 tcggttcctctagaagttgttgggagccgctcattgttgtgccttgtgcactggcgaccactccccgccctcgtcagc 32227444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 25230751 - 25230872
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| |||||||    
T  25230751 ttgttgatataggtagtaccaaacaattcttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgat 25230850  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  |||| |||| ||| |||||    
T  25230851 ttggttcctctataagctgtcg 25230872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 25238338 - 25238459
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||  |||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| |||||||    
T  25238338 ttgttgatataggtagtaccaaacaattcttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgat 25238437  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  |||| |||| ||| |||||    
T  25238438 ttggttcctctataagctgtcg 25238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 41472400 - 41472297
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||  |||||||||||| |||| | |||||||| ||||||||||||||||||    
T  41472400 ttgttgatatatgtagtaccaaacaattcttataag-cttccttcaaccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgtgat 41472302  T
Q  102 tcagt 106  Q
    |||||    
T  41472301 tcagt 41472297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 16811481 - 16811303
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||| |||||||||| | ||||||||| ||||| ||||||||||||||  |||| || ||||| ||||| |||||||| ||||||||||||||||||    
T  16811481 ttgttgaaataggtagtacccaacaattcttataagccttccttcaaccatggagtcccaaacctacacggcctcaggatccctctcattccgatgtgat 16811382  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||| ||||||||||||    
T  16811381 tcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagcc 16811303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 39653264 - 39653086
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||| ||||||||| |||||  |||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  39653264 ttgttgatataggtagtatccaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 39653165  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| |||| ||| ||||   || | ||||||||  |||||| || || | | ||||||||||| |||||||||||    
T  39653164 tcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcc 39653086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 25230294 - 25230415
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||||||||| ||||| |||||||| ||| | |||||||| ||||| ||||||||||||    
T  25230294 ttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgat 25230393  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  |||| |||| ||| |||||    
T  25230394 ttggttcctctataagatgtcg 25230415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 25237881 - 25238002
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||||||||| ||||| |||||||| ||| | |||||||| ||||| ||||||||||||    
T  25237881 ttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgat 25237980  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  |||| |||| ||| |||||    
T  25237981 ttggttcctctataagatgtcg 25238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 31284322 - 31284427
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||| | ||| |||| ||||||||||||||||||    
T  31284322 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacgacctcaagatccctctcattccgatgtgat 31284421  T
Q  102 tcagtt 107  Q
    ||||||    
T  31284422 tcagtt 31284427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 7493981 - 7493881
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| |||| |||||| ||||| ||||||||||||||  ||||||||||||  ||| ||| |||||||||||||||||||||||||    
T  7493981 ttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatctctctcattccgatgtgat 7493882  T
Q  102 t 102  Q
    |    
T  7493881 t 7493881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 50347846 - 50347668
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||  ||||||||||| || | ||| |||||||| |||||||||||  |||||    
T  50347846 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccaagtagtctcatacatacaaggcctcaggatccctctcattccggcgtgat 50347747  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | ||||||||  | |||| || || | | | |||||||||||||||||||||    
T  50347746 tcggttcctctagaagctgtcgggagccgctcattgtcgttccttgtgcaccggcgatcactccccgccctcgtcagcc 50347668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 32796981 - 32797082
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||||||| | ||  |||||||| |||| ||| |||||||||    
T  32796981 ttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtagtttcatacctacatggtctcaggatccctcttatttcgatgtgat 32797080  T
Q  102 tc 103  Q
    ||    
T  32797081 tc 32797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 7477291 - 7477191
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| |||| |||||| ||||| ||||||||||||||  ||||||||||||  ||| ||| |||||| ||||||||||||||||||    
T  7477291 ttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatccctctcattccgatgtgat 7477192  T
Q  102 t 102  Q
    |    
T  7477191 t 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 11180080 - 11180172
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 94  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| |||||||| |||||||||||    
T  11180080 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccg 11180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 14814046 - 14813938
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||||||||||||| ||||||||| | ||||| ||||||| ||||||  ||||||||||||| ||||| |||||| | ||||||||||| ||||||||     
T  14814046 ttgatataggtagtaccaaacaattattataagccttcctttaaccatgcagtctcatacctacacggcctcaggaaccctctcattccggtgtgattcg 14813947  T
Q  105 gttcgtcta 113  Q
    |||| ||||    
T  14813946 gttcctcta 14813938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 41474097 - 41473993
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||| |||||||  ||| | ||| |||| |||||||| |||||||||    
T  41474097 ttgttgatataggaagtatcaaacaattcttataagtcttcctttaaccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgtgat 41473998  T
Q  102 tcagt 106  Q
    |||||    
T  41473997 tcagt 41473993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 13150145 - 13150267
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| |||||| | |||||||||||  |||||    
T  13150145 ttgttgatacaggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgat 13150244  T
Q  102 tcagttcgtctaaaagttgtcga 124  Q
    || |||| |||| ||| ||||||    
T  13150245 tcggttcctctagaagctgtcga 13150267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 25239123 - 25239224
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| |||||  ||||||||||||||||||| |||||||| ||| | |||| ||| ||||||| ||| ||||||    
T  25239123 ttgttgatataggtagtaccaaaaaattcttataagcgttccttcaaccatatagtcccatacctacacgacctcagaatccctctcataccggtgtgat 25239222  T
Q  102 tc 103  Q
    ||    
T  25239223 tc 25239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 37045135 - 37045014
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||| || ||||||||||| |||||  ||||||||  ||| ||||| || ||||| ||||| |||||||| ||||||||| ||||||||    
T  37045135 ttgttgatataggtattaccaaacaattcttataagcattccttcattcatgtagtcccacacctacacggcctcaggatccctctcattcagatgtgat 37045036  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| |||| ||| |||||    
T  37045035 tcggttcctctagaagctgtcg 37045014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 16811025 - 16810847
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||| ||||||| |||||   ||||||||| ||||| ||||| ||||||||  |||| |||| ||| ||||| ||| |||| ||||||||||||||||||    
T  16811025 ttgtagatatagttagtacgcaacaattcttataagccttccatcaaccatgcagtcccatatctacacggcctcaagatccctctcattccgatgtgat 16810926  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  16810925 tcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 16810847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25248211 - 25248106
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||   |||||| ||||||  |||| |||||||  ||||| | || ||| ||||||||||||||||||    
T  25248211 ttgttgatataggtagtaccaaacaattcttataaacattcctttaaccatgcagtcccatacctgcacggccttagaatccctctcattccgatgtgat 25248112  T
Q  102 tcagtt 107  Q
    ||||||    
T  25248111 tcagtt 25248106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 32227600 - 32227480
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| ||| |||| |||||||||||  |||||    
T  32227600 ttgttaatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctca-gatccctctcattccggcgtgat 32227502  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| |||| ||| |||||    
T  32227501 tcggttcctctagaagctgtcg 32227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 25803057 - 25803228
Alignment:
Q  9 tataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 108  Q
    ||||||||||| ||||||||||| | ||||||| ||||||||||  |||| |||||||| ||| | | |||| | |||| |||||||| |||||| ||||    
T  25803057 tataggtagtaccaaacaattcttacaagtcttacttcaaccatgcagtcccatacctacacgacattaggaaccctcttattccgatatgattcggttc 25803156  T
Q  109 gtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
     |||| ||| ||| | ||| | |||||||||||||||| || ||   | ||||||||||| ||| |||||||    
T  25803157 atctagaagctgttggaagccgctcattgttatgccttgtgcaccagcgaccactccccgtcctagtcagcc 25803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 8067380 - 8067278
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||||| ||||| |  |||||||||||  | || |||||||  ||||| ||||| || ||||||||||||||||||    
T  8067380 ttgttgatataggtagtactaaacaattcttataagccggccttcaaccatgcaatcccatacctgcacggcctcagggtccctctcattccgatgtgat 8067281  T
Q  102 tca 104  Q
    |||    
T  8067280 tca 8067278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 25238730 - 25238790
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcat 62  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  25238730 ttgttgataaagatagtaccaaacaattcttataagtcttccttcaaccatgtagtctcat 25238790  T

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Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 32386780 - 32386844
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||||||    
T  32386780 ttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatacagtcccatacct 32386844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 2911195 - 2911084
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||| |||||||||||| | ||||   ||| ||||||||| | ||| |||||||  ||||| || ||||| ||||||||| | ||||||    
T  2911195 ttgttgatataggtaatatcaaacaatttttataaccattctttcaaccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtgtgat 2911096  T
Q  102 tcagttcgtcta 113  Q
    || |||||||||    
T  2911095 tcggttcgtcta 2911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 29224417 - 29224326
Alignment:
Q  9 tataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||| ||| | ||| ||| || | || |||||| |||||||    
T  29224417 tataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatatctacatggcctcatgaaccctttcattctgatgtga 29224326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 27187380 - 27187478
Alignment:
Q  6 tgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    |||||||||||||| ||||||||||| ||||| |||| || ||||||  |||| ||||| |  || || |||||||| |||||||||| ||||||||||    
T  27187380 tgatataggtagtaccaaacaattcttataagccttcatttaaccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgtgattca 27187478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 13150600 - 13150657
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtct 59  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||||    
T  13150600 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4067406 - 4067454
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaacc 50  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4067406 ttgttgatataggtagtaccaaacaatttttataagtcttccttcaacc 4067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 31104008 - 31104070
Alignment:
Q  4 gttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| ||||||  | ||||||||||    
T  31104008 gttggtatagatagtatcaaacaattcttataagtcttccttgaaccatgcaatctcatacct 31104070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 12820703 - 12820639
Alignment:
Q  43 cttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 107  Q
    ||||||||||  |||| ||||||| |||||| | || ||| ||||||||||||||||||||||||    
T  12820703 cttcaaccatgcagtcccatacctgtacggccttagaatccctctcattccgatgtgattcagtt 12820639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 14820254 - 14820134
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||| | || |  || | |||||||| ||||  |||||| | |||||||| || ||||||    
T  14820254 ttgttgatataagtagtaccaaacaattcttataagccttcctttagccgtgcagccccatacctacacgggctcaggaaccctctcattgcggtgtgat 14820155  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  14820154 tcggttcctctagaagctgtc 14820134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 25802594 - 25802685
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattcc 93  Q
    |||||||||||||||||| ||||| ||||| || || ||||| | ||||||  ||||||||||||| | |||  || |||| ||||||||||    
T  25802594 ttgttgatataggtagtaccaaaccattcttatcagccttccgttaaccatgcagtctcatacctacatggccacatgatccctctcattcc 25802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 7e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 43057569 - 43057747
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  43057569 ttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattccgatgtgat 43057668  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||||||| |||||  || | |||||||  ||||||| || || | | |||| ||||||||||| ||||||    
T  43057669 tcggttcctctaaaagctgtcgggagccgctcattggcatgccttgtgcaccggcgaccattccccgccctcttcagcc 43057747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 30872996 - 30873175
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||  ||||| |||| ||| ||||||||||| ||||||    
T  30872996 ttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcagaatccctctcattccggtgtgat 30873095  T
Q  102 tcagttcgtctaaaagttgtcgaaagtcctcattgttatgccttatgtactgacaaccactc--cccgccctcgtcagcc 179  Q
    || ||||||||| || ||||||||    ||||||||  |||||| || || ||| |||||||  | ||||||||||||||    
T  30873096 tcggttcgtctagaaattgtcgaagccgctcattgtcgtgccttgtgcaccgacgaccactccacgcgccctcgtcagcc 30873175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 43057111 - 43057288
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||| |||||||| ||||| | |||||| | ||||||| ||||||||    
T  43057111 ttgttgatataggtagtatcaaacaattcttctaagccttccttcaaccatgtagtcacatacctacacggccttaggatc-ccctcattctgatgtgat 43057209  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| || ||||||  |||| |||||||| ||||||| || || | ||||||||||||| |||||||||||    
T  43057210 tcggttcctctagaaattgtcgggagtcgctcattgtcatgccttgtgcaccggcaaccactccccgtcctcgtcagcc 43057288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 50002753 - 50002854
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  50002753 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggatctctctcattccgatgtgat 50002852  T
Q  102 tc 103  Q
    ||    
T  50002853 tc 50002854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 16451979 - 16452157
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| |||||  ||||||||||||| ||||| | |||||| | ||| |||||||| ||||||||||||||||||    
T  16451979 ttgttgatataggtagtacccaacaattcttataagctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgat 16452078  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  16452079 tcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 16452157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 16461132 - 16461310
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| |||||  ||||||||||||| ||||| | |||||| | ||| |||||||| ||||||||||||||||||    
T  16461132 ttgttgatataggtagtacccaacaattcttataagctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgat 16461231  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  16461232 tcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 16461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20054126 - 20054304
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20054126 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20054225  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20054226 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20054304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20054582 - 20054760
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20054582 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20054681  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20054682 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20054760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20055038 - 20055216
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20055038 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20055137  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20055138 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20055216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20055494 - 20055672
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20055494 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20055593  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20055594 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20055672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20055950 - 20056128
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20055950 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20056049  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20056050 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20056406 - 20056584
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20056406 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20056505  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20056506 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20056584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20057309 - 20057487
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  20057309 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 20057408  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20057409 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20057487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 35760960 - 35761062
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  ||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  35760960 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgat 35761059  T
Q  102 tca 104  Q
    |||    
T  35761060 tca 35761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 50002331 - 50002442
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| |||| ||||| ||| |||| ||||||||||||||||||    
T  50002331 ttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatgcctacacggcctcatgatccctctcattccgatgtgat 50002430  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  50002431 tcggttcctcta 50002442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20845707 - 20845885
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  ||||||||||||  ||||| |||||| |  |||||||||| ||||||    
T  20845707 ttgttgatataggtagtaacaaacaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtgtgat 20845806  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | ||||||||||| |||||||||||    
T  20845807 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcc 20845885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 35759654 - 35759756
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||| |||||||  ||||| |||||||| ||||||||||||||||||    
T  35759654 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgtgat 35759753  T
Q  102 tca 104  Q
    |||    
T  35759754 tca 35759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 52250306 - 52250128
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||||| | ||| ||| |||| ||||||||||| ||||||    
T  52250306 ttgttgatataggtagtacccaacaattcttataagccttccttcgaccatgtagtcccatacctacaaggcctcatgatccctctcattccggtgtgat 52250207  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | ||||||||  |||||| || || | | ||| |||||||||||||||||||    
T  52250206 tcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccgctccccgccctcgtcagcc 52250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 31822709 - 31822809
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||| ||| |||| ||||||||| ||||||||    
T  31822709 ttgttgatatatgtagtaccaaataattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcatgatccctctcattctgatgtgat 31822808  T
Q  102 t 102  Q
    |    
T  31822809 t 31822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 12883624 - 12883446
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||| |||  |||| |||||||  || || || |||||  |||||||||| ||||||    
T  12883624 ttgttgatataggtagtaccaaacaattcttataagtattccttcaatcatgcagtcccatacctgcacagcctcgggatccatctcattccggtgtgat 12883525  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || ||||||||| ||| |||||| || | ||||||||  |||||| || || ||| ||||||| || ||||||| ||||    
T  12883524 tcggttcgtctagaagctgtcgagagccgctcattgtcgtgccttgtgcaccgacgaccactcaccaccctcgttagcc 12883446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 2328415 - 2328310
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||||||| |||||| |||  || ||||||||||| |||||||    
T  2328415 ttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcataatttctctcattccaatgtgat 2328316  T
Q  102 tcagtt 107  Q
    ||||||    
T  2328315 tcagtt 2328310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 20061237 - 20061342
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||| |||||||  ||| | |||||||| ||||||||| ||||||||    
T  20061237 ttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtcccatacctgcacgacctcaggatccctctcattctgatgtgat 20061336  T
Q  102 tcagtt 107  Q
    ||||||    
T  20061337 tcagtt 20061342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 38341006 - 38340886
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| |  |||||||||| ||||||    
T  38341006 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtgtgat 38340907  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  38340906 tcggttcctctagaagctgtc 38340886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 51372920 - 51373096
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||| |||||||||||||  |||||||||| ||||| ||||||||||||||| |||| ||||||| || ||| || ||||| |||||||||   ||||||    
T  51372920 ttgtcgatataggtagtactaaacaattcttataagccttccttcaaccatacagtcacatacctgtatggcctcgggatccctctcattctagtgtgat 51373019  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcag 177  Q
    |  || |||||| ||| |||||  |||| ||||||||  ||||||||| |||| |||||||||  || |||||||||    
T  51373020 ttggtacgtctagaagatgtcgggagtcgctcattgtcgtgccttatgcactggcaaccactcttcgtcctcgtcag 51373096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 20057765 - 20057876
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||||||  |||| |||||||  ||||| |||||| | |||||||| || ||||||    
T  20057765 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcatttcggtgtgat 20057864  T
Q  102 tcagttcgtcta 113  Q
    ||||||| ||||    
T  20057865 tcagttcctcta 20057876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 10820689 - 10820571
Alignment:
Q  5 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 104  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||  |||| || || || |||  ||| |||||| |||||||||||||     
T  10820689 ttgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcactccgatgtgattcg 10820590  T
Q  105 gttcgtctaaaagttgtcg 123  Q
    |||| |||| |||||||||    
T  10820589 gttcatctagaagttgtcg 10820571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 7548191 - 7548086
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| || || ||||||||| | ||||||||||||| || ||| |||||||||||||| ||||| ||| |||| |||||||| | |||||||    
T  7548191 ttgttgatatagttaataccaaacaatttttataagtcttcctttaatcatgtagtctcatacctacacggcctcatgatccctctcattgcaatgtgat 7548092  T
Q  102 tcagtt 107  Q
    ||||||    
T  7548091 tcagtt 7548086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 23180830 - 23180728
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||| ||||||| ||||   ||||||||||||  ||||| ||| |||| ||||||||| |||| |||||||||| |||||||    
T  23180830 ttgttgatataggtagtaccaagcaattcttataatcattccttcaaccacgtagtcccattcctacacggcttcaagatccctctcattccaatgtgat 23180731  T
Q  102 tca 104  Q
    |||    
T  23180730 tca 23180728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 46693781 - 46693884
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat-atagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||||||||||||||||| ||||||||| | ||||| |||||||||||||| | |||| ||||| |  ||| | | |||||| |||||||||||||||||    
T  46693781 ttgttgatataggtagtaccaaacaatttttataagccttccttcaaccatcacagtcccatacatgcacgaccttaggatccctctcattccgatgtga 46693880  T
Q  101 ttca 104  Q
    ||||    
T  46693881 ttca 46693884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20056862 - 20057031
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| |  |||| ||||||         |||||| | ||||||||||| ||||||    
T  20056862 ttgttgatataggtagtaccaaacaattctcataagccttccttcaaccctgcagtcccatacc---------tcaggaaccctctcattccggtgtgat 20056952  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  20056953 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 20057031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 50003121 - 50003227
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||| | |||||||| |||| ||||||  ||||  ||||||  | ||| |||||||| ||||||||||||||||||    
T  50003121 ttgttgatataggtagtacccaacaattattataagtctccctttaaccatgcagtcctatacctgcatggcctcaggatccctctcattccgatgtgat 50003220  T
Q  102 tcagttc 108  Q
    || ||||    
T  50003221 tcggttc 50003227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 2635024 - 2634923
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||||||||| ||||||||||| || |||  ||||||||||||  |||| |||||||  ||  | ||| |||| ||||||||||||||||||    
T  2635024 ttgttggtataggtagtaccaaacaattcttatgagttatccttcaaccatgcagtcccatacctgcacaacctcatgatccctctcattccgatgtgat 2634925  T
Q  102 tc 103  Q
    ||    
T  2634924 tc 2634923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 16907334 - 16907270
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||||||  ||| ||||||||    
T  16907334 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgcagtttcatacct 16907270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 12728092 - 12728026
Alignment:
Q  2 ttgttgatataggtagtatc-aaacaattctcataagtcttccttcaaccatatagtctcataccta 67  Q
    ||||||||||||| |||| | |||||||||| |||||||||||||||||||| | ||| ||||||||    
T  12728092 ttgttgatataggcagtaaccaaacaattcttataagtcttccttcaaccatgttgtcccataccta 12728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 2739622 - 2739554
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatac 70  Q
    ||||||||||| |||||   |||||||||| ||||||||| | | ||||||| ||||||||||||||||    
T  2739622 ttgttgatatatgtagtgctaaacaattcttataagtctttccttaaccatacagtctcatacctatac 2739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20060386 - 20060431
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttca 47  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||||    
T  20060386 ttgttgatataggtagtaccaaacaattcttataagctttccttca 20060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10927449 - 10927568
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| ||| |||| ||||||||||||||||||    
T  10927449 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaagatccctctcattccgatgtgat 10927548  T
Q  102 tcagttcgtctaaaagttgt 121  Q
    || |||| |||| |||||||    
T  10927549 tcggttcctctataagttgt 10927568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 42788692 - 42788869
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||| ||  |||| ||||| |||||||| ||||||||||| ||||||    
T  42788692 ttgttgatataggtagtaccaaacaattcttataagtcttctttcaaccatgtagtcccaatcctacacggcctcaggatccctctcattccgttgtgat 42788791  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| |||||||||| || | |||| |||| |||||| || || | | |||||||||||||||||||||||    
T  42788792 tcggttcctctagaagttgtcgagagccgctca-tgttgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 42788869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20039520 - 20039698
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||  ||||||| ||||| ||| |||| ||||||||||||||||||    
T  20039520 ttgttgatataggtagtaccaaacaattcttataagccttccttcaactatgtagtcctatacctacacggcctcatgatccctctcattccgatgtgat 20039619  T
Q  102 tcagttcgtctaaaagttgtcgaaag-tcctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || ||| ||||| ||| |||||  || | |||||||| ||||||| || || | | |||| ||||||||||||||||||    
T  20039620 tcggtttgtctagaagctgtcgggagctgctcattgtcatgccttgtgcaccggcgaccattccccgccctcgtcagcc 20039698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 39147039 - 39146919
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| ||||| |||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||| ||| |||| |||||||| |||||||||    
T  39147039 ttgttaatataagtagtatcaaacaattcttataagtctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgtgat 39146940  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    ||||||| |||| ||||||||    
T  39146939 tcagttcctctagaagttgtc 39146919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 17445501 - 17445620
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| |||| ||||| |||||||| |||||||| |||||||||    
T  17445501 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatgtgat 17445600  T
Q  102 tcagttcgtctaaaagttgt 121  Q
    || |||| |||| |||||||    
T  17445601 tcggttcctctagaagttgt 17445620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 10926992 - 10927170
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||| ||||||||    
T  10926992 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattctgatgtgat 10927091  T
Q  102 tcagttcgtctaaaagttgtcgaaag-tcctcattgttatgccttatgtactgacaaccactcccc-gccctcgtcagc 178  Q
    || |||| |||| ||| |||||  || | ||||||||  |||||| || || ||| | |||||||| ||||||||||||    
T  10927092 tcggttcctctataagctgtcgggagctactcattgtcgtgccttgtgcaccgacgatcactcccctgccctcgtcagc 10927170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 189168 - 189063
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||||| | |||||| |||||||| ||||||||||||||||||    
T  189168 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccgatgtgat 189069  T
Q  102 tcagtt 107  Q
    ||||||    
T  189068 tcagtt 189063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 3887103 - 3887208
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||  ||||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||||||    
T  3887103 ttgttgatataggtagtaccaaataattcatataagtcttccttcaaccatgcagtcccatacctgtacggcctcaggatcactctcattccgatgtgat 3887202  T
Q  102 tcagtt 107  Q
    ||||||    
T  3887203 tcagtt 3887208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 2193916 - 2193738
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| ||| |||| |||||||||||  |||||    
T  2193916 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcattccggcgtgat 2193817  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| |||||  || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  2193816 tcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 2193738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 2474505 - 2474400
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||  |||| |||| || |||| | | |||||||||||||||||||||||||    
T  2474505 ttgttgatataggtagtaccaaacaattcttttaagtcttccttcaaccatgcagtcccatatctgtacgaccttaggatctctctcattccgatgtgat 2474406  T
Q  102 tcagtt 107  Q
    ||||||    
T  2474405 tcagtt 2474400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 2474059 - 2473954
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||  |||||||| ||| |||| | | |||||| ||||||||||||||||||    
T  2474059 ttgttgatataggcagtaccaaacaattcttataagccttccttcaaccatgcagtctcatgcctgtacgaccttaggatccctctcattccgatgtgat 2473960  T
Q  102 tcagtt 107  Q
    ||||||    
T  2473959 tcagtt 2473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22556636 - 22556531
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||||||||||    
T  22556636 ttgttgatataggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccgatgtgat 22556537  T
Q  102 tcagtt 107  Q
    ||||||    
T  22556536 tcagtt 22556531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 27646881 - 27647002
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||| | |||||||| |||||   |||||| ||||||||||||||||||    
T  27646881 ttgttgttataggtagtaccaaacaattcttataagccttccttcaaccatgtagccccatacctacacggccctaggatccctctcattccgatgtgat 27646980  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| |||| ||| |||||    
T  27646981 tcggttcctctagaagctgtcg 27647002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 34867890 - 34867770
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||    
T  34867890 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgat 34867791  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  34867790 tcggttcttctagaagctgtc 34867770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 42429245 - 42429131
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||||||| |  || |||||||| ||||  |||||||| |||| |||||||||||||    
T  42429245 ttgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatgtgttcacatacctacacggtctcaggatc-ctcttattccgatgtgat 42429147  T
Q  102 tcagttcgtctaaaag 117  Q
    || |||||||||||||    
T  42429146 tcggttcgtctaaaag 42429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1822006 - 1821904
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  ||||||||||||  ||| | | | |||||||||||||||||||| ||    
T  1822006 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtctcatacctgcacgaccttaagatctctctcattccgatgtaat 1821907  T
Q  102 tca 104  Q
    |||    
T  1821906 tca 1821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 2058702 - 2058803
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||| |||  ||||||||| ||  | | ||||||||||||||||| |||||||||||    
T  2058702 ttgttgatataggtagtaccaaacaattcatataagtcttccttcaatcatccagtctcatagctgcatgacttcaggatctctctcaatccgatgtgat 2058801  T
Q  102 tc 103  Q
    ||    
T  2058802 tc 2058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 8391368 - 8391468
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| ||| |||| ||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||| |||| ||| ||||||||||||||||||    
T  8391368 ttgttgatacagg-agtaccaaacaattcttataagtcttccttcaatcatgtagtctcatgcctacacggcctcagaatccctctcattccgatgtgat 8391466  T
Q  102 tc 103  Q
    ||    
T  8391467 tc 8391468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22557069 - 22556964
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||| ||||||| ||||||||||  ||||| ||||||||||||||  |||| |||||||  ||||| ||| || ||||||||||||||||||||    
T  22557069 ttgttgatattggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaactctctcattccgatgtgat 22556970  T
Q  102 tcagtt 107  Q
    ||||||    
T  22556969 tcagtt 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 8642080 - 8642182
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||| ||||| ||||||||||||||  |||| |||||||  ||||| | |||||| ||||||||| ||||||||    
T  8642080 ttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgcagtcccatacctgcacggccttaggatccctctcattctgatgtgat 8642179  T
Q  102 tca 104  Q
    |||    
T  8642180 tca 8642182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 11160727 - 11160848
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||| |||| ||||| ||||||||| | ||||| ||||||||||| || |||| ||||||||| ||| ||||| |||| ||||||||||||||  ||    
T  11160727 ttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctctcattccgatgcaat 11160826  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    || |||| ||||||| ||||||    
T  11160827 tcggttcatctaaaaattgtcg 11160848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 4658038 - 4658216
Alignment:
Q  1 gttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||| |||||||||  ||||||||||||  |||| |||| |||| |||| ||| ||||||||    
T  4658038 gttgttgttataggtagtatcaaacaagtcttataa-tcttcgttcaaccatgaagtctcatacctgcacggtttcaagatccctcttatttcgatgtga 4658136  T
Q  101 ttcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||||||| | ||| | | ||||   ||||  ||||||| |||| ||||| |||| | ||||||||||| ||| |||||||    
T  4658137 ttcagtttgcctagaggctgtcaggagtcggtcattgtcatgcattatgcactggcgaccactccccgtccttgtcagcc 4658216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 3886647 - 3886749
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||  |||||  ||||||| |||||  |||| ||||| | |||| | |||||||| ||||||||||||||||||    
T  3886647 ttgttgatataggtagtaccaaacaattcatataagcattccttctaccatgcagtcccatacttgtacgacctcaggatccctctcattccgatgtgat 3886746  T
Q  102 tca 104  Q
    |||    
T  3886747 tca 3886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 16370754 - 16370852
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    ||||||||||| |||||| ||||||||||| |||||| |||||||||||||  ||||| ||||||| | ||| |||||| | |||||||| ||||||||    
T  16370754 ttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtcttatacctacatggcatcaggaaccctctcatttcgatgtga 16370852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 34371712 - 34371534
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||||  ||||  |||||||||||||  |||| || |||| |||||| |  ||| | ||||||||||| ||||||    
T  34371712 ttgttgatataggtagtaccaaacaattcttttaagcattccttcaaccatgcagtcccacacctgtacggccttgggaaccctctcattccggtgtgat 34371613  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  34371612 tcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 34371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 34372168 - 34371990
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||||  ||||  ||||||||||||| ||||| ||||| | |||||| |  ||| | ||||||||| | ||||||    
T  34372168 ttgttgatataggtagtaccaaacaattcttttaagcattccttcaaccatgtagtcccatacttgtacggccttgggaaccctctcattctggtgtgat 34372069  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||| ||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  34372068 tcggttcctctagaagctgtcaggagccgctcattgtcctgccttgtgcaccggcgaccactccccgccctcgtcagcc 34371990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 21886192 - 21886303
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||  | |||||| | ||||||||||| ||||||    
T  21886192 ttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacaacctcaggaaccctctcattccggtgtgat 21886291  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  21886292 tcggttcctcta 21886303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 5066937 - 5067055
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||| || || ||||||||||| |||||| |||||| || |||| |||||||||| |  ||||| || ||||||||||||||| | ||||||    
T  5066937 ttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctctcattctggtgtgat 5067036  T
Q  102 tcagttcgtctaaaagttg 120  Q
    ||  || ||||| ||||||    
T  5067037 tcgatttgtctagaagttg 5067055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 15513058 - 15513173
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataag--tcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 99  Q
    |||||||||| ||||||| ||| ||||||| |||||  | ||||||||||||| ||||| |||||||| || || | | |||| ||||||||||||||||    
T  15513058 ttgttgatattggtagtaccaa-caattcttataagcatattccttcaaccatgtagtcccatacctacacagcctaatgatccctctcattccgatgtg 15513156  T
Q  100 attcagttcgtctaaaa 116  Q
    |||| |||| |||||||    
T  15513157 attcggttcctctaaaa 15513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 22975076 - 22975161
Alignment:
Q  22 aaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 107  Q
    |||||||||| |||||  || ||||||||||  |||| |||||||  ||||| |||||||| ||||||||||||||||||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgtgattcagtt 22975161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 18304531 - 18304410
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||   |||||  || | ||| |||| ||||| |||||||| ||| | ||||||||  |||||||||| ||||||    
T  18304531 ttgttgatataggtagtaccaaacaatttatataagcttttcatcatccatgtagtcccatacctacacgacctcaggatccttctcattccgttgtgat 18304432  T
Q  102 tcagttcgtctaaaagttgtcg 123  Q
    |  ||||||||| ||| |||||    
T  18304431 ttggttcgtctagaagctgtcg 18304410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 29680177 - 29680236
Alignment:
Q  33 ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattc 92  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||    
T  29680177 ataagccttccttcaaccatgtagtcccatacctacacggcctcaagatctctctcattc 29680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 5549445 - 5549339
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctc-ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 100  Q
    |||||| |||| |||||| ||||||||| |  |||||| |||||||||  ||| | ||||||||||| | || |||| || |  ||||||||||||||||    
T  5549445 ttgttggtatacgtagtaccaaacaattttttataagttttccttcaattatacaatctcatacctacatggtttcatgaaccatctcattccgatgtga 5549346  T
Q  101 ttcagtt 107  Q
    |||||||    
T  5549345 ttcagtt 5549339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 24182291 - 24182353
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatac 64  Q
    |||||| ||||| ||||| |||| |||||| ||||| |||||||||||||| | |||||||||    
T  24182291 ttgttggtatagatagtaccaaataattcttataagccttccttcaaccatttcgtctcatac 24182353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 2842 - 2664
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| |||||||| |||||||||    
T  2842 ttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgtgat 2743  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    ||  ||| |||| |||||||||  || | ||||||||  |||||| ||  | | | |||||||||||||||||||||||    
T  2742 tcgattcctctagaagttgtcgggagccactcattgtcgtgccttgtgctccggcgaccactccccgccctcgtcagcc 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 162724 - 162829
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||| ||    
T  162724 ttgttaatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcacatacctgtacggcctcaggatccctctcattccgatgtaat 162823  T
Q  102 tcagtt 107  Q
    ||||||    
T  162824 tcagtt 162829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 69862 - 69925
Alignment:
Q  3 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 66  Q
    ||||||||||||||||| ||||||||| | |||||  |||||||||| ||  ||||||||||||    
T  69862 tgttgatataggtagtaccaaacaattattataagcattccttcaacgatgcagtctcatacct 69925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 107509 - 107614
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||  |||| ||||||| |||||| |||| ||| ||||||||||||||||||    
T  107509 ttgttgatattggtagtatcaaacaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgtgat 107608  T
Q  102 tcagtt 107  Q
    ||||||    
T  107609 tcagtt 107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 245186 - 245084
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||||||||    
T  245186 ttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctcattccgatgtgat 245087  T
Q  102 tca 104  Q
    |||    
T  245086 tca 245084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 245615 - 245510
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| |||||  | |||||||||||  |||| |||||||| ||||  ||| |||| || |||||  ||||||||    
T  245615 ttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagatccctttcattatgatgtgat 245516  T
Q  102 tcagtt 107  Q
    ||||||    
T  245515 tcagtt 245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 2256 - 2361
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||  ||||| | ||||||  |||||||||||||||||    
T  2256 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatacctgcacggccttaggatccttctcattccgatgtgat 2355  T
Q  102 tcagtt 107  Q
    ||||||    
T  2356 tcagtt 2361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 19066 - 18961
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| || ||||| ||||||||||||||||||    
T  19066 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgat 18967  T
Q  102 tcagtt 107  Q
    | ||||    
T  18966 ttagtt 18961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 18204 - 18271
Alignment:
Q  39 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagt 106  Q
    ||||||||||||||  |||| |||||||  ||||| || ||||| |||||||||||||||||||||||    
T  18204 cttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattcagt 18271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 105820 - 105715
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||| |  |||  ||||||| |||||| |||||||| ||||||||||||||||||    
T  105820 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccctgcagttccatacctgtacggcctcaggatccctctcattccgatgtgat 105721  T
Q  102 tcagtt 107  Q
    | ||||    
T  105720 ttagtt 105715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 142320 - 142425
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||   |||||||||||||  |||| |||||||  ||||| |||||||| ||||||||||||||||||    
T  142320 ttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctctcattccgatgtgat 142419  T
Q  102 tcagtt 107  Q
    ||||||    
T  142420 tcagtt 142425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 1320 - 1142
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  | ||| |||||| |  |||||||||| ||||||    
T  1320 ttgtttatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtgtgat 1221  T
Q  102 tcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgccttatgtactgacaaccactccccgccctcgtcagcc 179  Q
    || |||| |||| ||||||||   || | ||||||||  |||||| || || | | |||||||||||||||||||||||    
T  1220 tcggttcctctagaagttgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 10400 - 10295
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||||||||||||  |||||||||| ||||| ||||||| ||||||  |||| ||||| |  ||||| |||||||| ||||||||||||||||||    
T  10400 ttgttgatataggtagtactaaacaattcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgat 10301  T
Q  102 tcagtt 107  Q
    ||||||    
T  10300 tcagtt 10295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 2097 - 2203
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  ||||||||||||  ||||| |||||| | || |||||| | ||||||    
T  2097 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccctttcattctggtgtgat 2196  T
Q  102 tcagttc 108  Q
    || ||||    
T  2197 tcggttc 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 154857 - 154735
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||| | ||| |||||| | |||||||||||  |||||    
T  154857 ttgttgatacaggtagtacccaacaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgat 154758  T
Q  102 tcagttcgtctaaaagttgtcga 124  Q
    || |||| |||| ||| ||||||    
T  154757 tcggttcctctagaagctgtcga 154735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 23773 - 23662
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| ||| || | |||||||| || ||||||    
T  23773 ttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctcatttcggtgtgat 23674  T
Q  102 tcagttcgtcta 113  Q
    || |||| ||||    
T  23673 tcggttcctcta 23662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 4661 - 4541
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||||||||||  |||  ||||||||||||||  |||| |||||||  | ||| |||||| | ||||| ||||||||||||    
T  4661 ttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctccttccgatgtgat 4562  T
Q  102 tcagttcgtctaaaagttgtc 122  Q
    || |||| |||| ||| ||||    
T  4561 tcggttcctctagaagctgtc 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 5079 - 4996
Alignment:
Q  39 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 122  Q
    ||||||||||||||  |||| |||||||  | ||| |||||| | ||||||||||| |||||||| |||| |||| ||||||||    
T  5079 cttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctcattccggtgtgattcggttcctctagaagttgtc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 45486 - 45387
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  |  ||||  ||| |||| ||||||||||||||||||    
T  45486 ttgttgatataggtagtaccaaataattctcataagtcttccttcaacaatgtagtcacatatatgcacggtctcaagatc-ctctcattccgatgtgat 45388  T

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Target: scaffold0664 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 4028 - 4130
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 101  Q
    ||||||||| |||||||| ||||||||||| |||||  |||||||||| ||  |||| |||||||  ||||| || ||||| ||||||||| | ||||||    
T  4028 ttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacctgcacggcctcgggatccctctcattctggtgtgat 4127  T
Q  102 tca 104  Q
    |||    
T  4128 tca 4130  T

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Target: scaffold0557 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 798 - 729
Alignment:
Q  54 tagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 123  Q
    ||||| |||||||| | ||| |||||||| |||||||||||||||||||| |||| |||| |||||||||    
T  798 tagtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctctataagttgtcg 729  T

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Target: scaffold0557; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 2205 - 2150
Alignment:
Q  2 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 57  Q
    ||||| ||||||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  2205 ttgtttatatagggagtaccaaacaattcttataagccttccttcaaccatgtagt 2150  T

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Target: scaffold1138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 774 - 812
Alignment:
Q  33 ataagtcttccttcaaccatatagtctcatacctatacg 71  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  774 ataagtcctccttcaaccatataatctcatacctatacg 812  T

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