View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21633_low_14 (Length: 236)
Name: NF21633_low_14
Description: NF21633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21633_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 9604931 - 9605085
Alignment:
| Q |
19 |
aatatactaattagaaacactttaaagatcctaccc-aagttttcacatacacgtgg-catctcttaaatataagttgatcttgtacatgtaagaattaa |
116 |
Q |
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| T |
9604931 |
aatatactaatgagaaacactttaaagatcctaccccaagttttcacatacacgtgggcatctctcaaatataagttgattttgtacatgtaagaattaa |
9605030 |
T |
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| Q |
117 |
taacttggtcagaaaagcaagatgatatataagctttact-aaacactttgttag |
170 |
Q |
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| T |
9605031 |
taacttggtcagaaaagcaagatgatatataagctttactcaaacactttgttag |
9605085 |
T |
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