View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21634_low_5 (Length: 368)
Name: NF21634_low_5
Description: NF21634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21634_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 14 - 351
Target Start/End: Original strand, 36240337 - 36240673
Alignment:
| Q |
14 |
gagatgaagtatcaatatgactaagtttattaattaacatggttaatcaaaagatgcatgctatgttgattaaggatagacatactagttggctatatgg |
113 |
Q |
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| T |
36240337 |
gagatgaagtaacaatatgactaagtttattaattaacatgtttaatcaaa-gatacatgctatgttgattaaggatagacatacaagttggctatatgg |
36240435 |
T |
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| Q |
114 |
gaattaattatagagtatagactaaatcaagaaacaggttgtttgatgtagtagggattgttttctggcgcaccaatttcatagttgcaaaatttaatgc |
213 |
Q |
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| T |
36240436 |
gaattaattatagagtatagactaaatcaagaaacaggttgtttgatgtagtagggattgttttctggcgcaccaatttcatagttgcaaaatttaatgc |
36240535 |
T |
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| Q |
214 |
ttggtgatcaaactaaattaaaaatgatgggtctaatgggtagttgttcaattatttttggaataatctgaccgttgattaagggactggggtactagtt |
313 |
Q |
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| T |
36240536 |
ttggtgatcaaactaaattaaaaatgatgggtctaatgggtagttgttcaattatttttggaataatctgaccgttgattaagggactggggtactagtt |
36240635 |
T |
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| Q |
314 |
tggtttgttttgttactaagggaaaatgtacttgtact |
351 |
Q |
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| T |
36240636 |
tggtttgttttgttacaaagagaaaatgtacttgtact |
36240673 |
T |
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