View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21635_high_14 (Length: 267)
Name: NF21635_high_14
Description: NF21635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21635_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 41823797 - 41823549
Alignment:
| Q |
1 |
gttgtaagaaatcaatcatcactaaaatagaaaagaaaatacaacatggctcgtttcttttctcttgtggtggtgtttcttttatgtgcttcattctcct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41823797 |
gttgtaagaaatcaatcatcactaaaatagaaaagaaaatacaacatggctcgtttcttttctcttgtggtggtgtttcttttatgtgcttcattctcct |
41823698 |
T |
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| Q |
101 |
gtgttgcttcaaacaaaattgtagatgtggataccttatgtaaagatgcaatggatcctaaattttgctccacattgatcaaatcaaagcctggtgcaga |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41823697 |
gtgttgcttcaaacaaaattgtagatgtggataccatatgtaaagatgcaatggatcctaaattttgctccacattgatcaaatcaaagcctggtgcaga |
41823598 |
T |
|
| Q |
201 |
aagagacctagttagccttgcatcatacacacttgatgttgctcataga |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41823597 |
aagagacctagttagccttgcatcatacacacttgatgttgctcataga |
41823549 |
T |
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