View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21635_high_15 (Length: 266)
Name: NF21635_high_15
Description: NF21635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21635_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 41823773 - 41824031
Alignment:
| Q |
1 |
ttagtgatgattgatttcttacaaccataccttcacagtttatatagtaaaaagtaacatgcgtac-taagacctaattcaaatgacaaaaatatgtcaa |
99 |
Q |
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| T |
41823773 |
ttagtgatgattgatttcttacaaccataccttcacagtttatatagcaaaaagtaacatgcgtacctaattcctaattcaaatgacaaaaatatgtcaa |
41823872 |
T |
|
| Q |
100 |
atatattaagtgacaaaaatgtaacaataagaaattacaactaacaagcattatccaaatataaaaag-aaacacaaattaatattgaagcctaaaaaag |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
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| T |
41823873 |
atatattaagtgacaaaaatgtaacaataagaaattacaactaacaagcattatccaaatataaaaggaaaacacaaattaatattgaagcctaaaaaag |
41823972 |
T |
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| Q |
199 |
aaagtaactcgtcaacaaatcctaattcaactgacaaaaatgttaaaattgtgatgatg |
257 |
Q |
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||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
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| T |
41823973 |
aaagttactcgtcaacaaatcttaatttaactgacaaaaatgttaaaattgtgatgatg |
41824031 |
T |
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