View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21635_low_13 (Length: 268)
Name: NF21635_low_13
Description: NF21635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21635_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 39981692 - 39981444
Alignment:
| Q |
1 |
ctaaactggatcttgttaatcgaacctccttgaatccctctctgccgagcaagagtatcaaaaagcatctcagcataggcctttgactcttcattcaatc |
100 |
Q |
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| T |
39981692 |
ctaaactggatcttgttaatcgaacctccttgaatccctctctgccgagcaagagtatcaaaaagcatctcagcataggcctttgactcttcattcaatc |
39981593 |
T |
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| Q |
101 |
ctacaattgaatccaaagaaacacttcgaaattactctatacttataatcaaagtttcaaatcacttgatcgtgctgcaatctttgatattgcagaaaat |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39981592 |
ctacaattgaatccaaagaaacacttagaaattactctatacttataatcaaagtttcaaatcacttgatcgtgctgcaatctttgatattgcagaaaat |
39981493 |
T |
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| Q |
201 |
tactgtcaaatatgactgatgcaactttaatagttgtgatggtagagac |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39981492 |
tactgtcaaatatgactgatgcaactttaatagttgtgatggtagagac |
39981444 |
T |
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