View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21636_high_1 (Length: 1135)
Name: NF21636_high_1
Description: NF21636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21636_high_1 |
 | |
|
| [»] chr3 (3 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 728; Significance: 0; HSPs: 36)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 728; E-Value: 0
Query Start/End: Original strand, 1 - 1132
Target Start/End: Original strand, 15346342 - 15347473
Alignment:
| Q |
1 |
tgagtttgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15346342 |
tgagtttgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaattccaacttgtccacgtact |
15346441 |
T |
|
| Q |
101 |
tgcttgacatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgc |
200 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
15346442 |
tgcttgacatattagcttctgcggcatccattacacttttaactctctccaagttctcaatgtgaaggtctccttgaaggttcatctgtcctaattctgc |
15346541 |
T |
|
| Q |
201 |
taaaagatacccttttttcatgccaactacgaatagtgttaaagttttcaaggatgccaacatccttacatgcgggggcaagcttgaaagggaatagcag |
300 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| |||| |
|
|
| T |
15346542 |
taaaagaaacccttttttcttgccaactacgtattgtgttaaagttttcaaggatgccaacatccttacatgttggggcaagcttgatagtgaaatgcag |
15346641 |
T |
|
| Q |
301 |
tctctcaaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattcc |
400 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
15346642 |
cctctcaaatatagacgttgtagagctttcaagtgtaccagactattaggcaacttttggagattttgacaatagtctagctttaaaatctgcaaattcc |
15346741 |
T |
|
| Q |
401 |
acaacgtacataaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaacttttc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15346742 |
acaacgtacataaggattctggaagagttttgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaacttttc |
15346841 |
T |
|
| Q |
501 |
ttttctctcaaagtcaagcactcgtaaagaataacatctcaatacatggggtgagagttggtcaacacaatttatgcatgtttttaatgattcaacacag |
600 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||| ||||| ||||||||| |
|
|
| T |
15346842 |
ttttctttcgaagtcaagcactcgtaaagaataacatctcaatacatggggtgaaagttggtcatcataatttatacatgtctttaacgattcaacatta |
15346941 |
T |
|
| Q |
601 |
tgtaacctgattgaaccaacttcctcaaacatgttccacctgcaaattgagagatgacggactctttcagacatacttggtatgccactatcatttgtaa |
700 |
Q |
| |
|
|||||||||||||| | ||| | | ||| | || || ||| |||||||||||||| |||| | ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15346942 |
tgtaacctgattgagcaaacattccgaaaaaagtccctcctacaaattgagagatggcggattttttcagacatactaggtatgccactatcatttgtaa |
15347041 |
T |
|
| Q |
701 |
tgtgacagatctcttcagcaatagattgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttg |
800 |
Q |
| |
|
||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| |||| |||| ||||||||| |
|
|
| T |
15347042 |
tgtgacagacctcttctgtgatagattgagcaagatcatgaacaagatcatgcatcgtgaaatatacaatttgtccaaaatcatctgtctgagtatcttg |
15347141 |
T |
|
| Q |
801 |
gaaaaatgatctacaatataattcattccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagc |
900 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||| | || ||||||| ||||||||| ||| |||| |||| ||||||||| |||||| |||||||| |
|
|
| T |
15347142 |
aaaaaatgatctacaatataattcattccatgcttcattaccaatatcttctgcttccaacattccattggatggaataaatccattagccatccaaagc |
15347241 |
T |
|
| Q |
901 |
tcgattagaaactgcttacttataattccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacc |
1000 |
Q |
| |
|
|| |||| |||||| || ||||||||| |||||||||||||||||||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| | |
|
|
| T |
15347242 |
tcaattacaaactgtttgcttataatttcatccttgggaaatagtgcacaaaaggcaaaacattgtctcaattttaccggcaaattcaagtaacttaatc |
15347341 |
T |
|
| Q |
1001 |
tcaaggcaggcatgaccgaattctcaccttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagact |
1100 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||| | ||| |
|
|
| T |
15347342 |
tcaacgcaggcatgacagaattctcaccttgtaaattccatagcttactttccttgacatagcgccattccttttcttctcgtttaaaccgcaataaact |
15347441 |
T |
|
| Q |
1101 |
tcctagtgcttttgctgcaagaggcactcccc |
1132 |
Q |
| |
|
||| |||||||||||||| ||||| ||||||| |
|
|
| T |
15347442 |
tcccagtgcttttgctgcgagagggactcccc |
15347473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 1 - 736
Target Start/End: Original strand, 15353678 - 15354413
Alignment:
| Q |
1 |
tgagtttgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtact |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| | |||||||||||| ||| |
|
|
| T |
15353678 |
tgagtttgaggttgaagaacttcaagaatctcctcaacattttcctgtaattgtgactcttcatttacctcccatcgcaattgcaacttgtccacacact |
15353777 |
T |
|
| Q |
101 |
tgcttgacatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
15353778 |
tgcttgacatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtgaagtgctccttgaaggttcatctgtcctaattctgc |
15353877 |
T |
|
| Q |
201 |
taaaagatacccttttttcatgccaactacgaatagtgttaaagttttcaaggatgccaacatccttacatgcgggggcaagcttgaaagggaatagcag |
300 |
Q |
| |
|
||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
15353878 |
taaaagaaacccttttttcttgccaactacttacagtgttaaagttttcaaggatgccaacatccttacatgcgggggcaagcttgatagtgaatagcag |
15353977 |
T |
|
| Q |
301 |
tctctcaaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattcc |
400 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| || | ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
15353978 |
cctctcaaatatagatgttgtagagatttcaagtgtaccagactattagggaacttttgtagttcttgacaataatctaactttaaaatctgcaaattcc |
15354077 |
T |
|
| Q |
401 |
acaacgtacataaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaacttttc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15354078 |
acaacgtacataaggattctggaagagttttgaaacctccataagaaagattcaagtaccttagatattttaaacgaccaattgaagacggcaacttttc |
15354177 |
T |
|
| Q |
501 |
ttttctctcaaagtcaagcactcgtaaagaataacatctcaatacatggggtgagagttggtcaacacaatttatgcatgtttttaatgattcaacacag |
600 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||| ||||| ||||| |||||||| |
|
|
| T |
15354178 |
ttttctcttgaattcaagcactcgtaaagaataacatctgaatacatggggtgagagttggtcatcataatatatacatgtctttaacgattcaacgtta |
15354277 |
T |
|
| Q |
601 |
tgtaacctgattgaaccaacttcctcaaacatgttccacctgcaaattgagagatgacggactctttcagacatacttggtatgccactatcatttgtaa |
700 |
Q |
| |
|
|||||||||||||||||||||| | |||| || |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
15354278 |
tgtaacctgattgaaccaactttcccaaaagagtcccacatgcaaattgagagatgacgaactctttcagacatacttggtacgccactatcatttgtga |
15354377 |
T |
|
| Q |
701 |
tgtgacagatctcttcagcaatagattgagcaagat |
736 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15354378 |
tgtgacagatctcttcagcgatagattgagcaagat |
15354413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 732 - 1135
Target Start/End: Original strand, 15357342 - 15357745
Alignment:
| Q |
732 |
aagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattccac |
831 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15357342 |
aagatcatgaacaagatcatgcatcttgaaagatacaatttttccaaattcatttgtcttggtatcttggaaaaatgatctacaatataattcattccac |
15357441 |
T |
|
| Q |
832 |
acctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattccat |
931 |
Q |
| |
|
|||||| |||| |||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||||| || | ||||||||||||||||||| || |
|
|
| T |
15357442 |
acctcattgccgatatcttgtgcttccagtatttcattggatgaaataaatccattagccatccaaagctcaatcaaaaactgcttacttataatttgat |
15357541 |
T |
|
| Q |
932 |
ccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcaccttg |
1031 |
Q |
| |
|
|||||| ||| |||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||| |
|
|
| T |
15357542 |
ccttggaaaaaagtgcacaaaaggcaaagcactgcctcaattttaccggcaaattcaagtaacttaacctcaaggaagacatgactgaattctcaccttg |
15357641 |
T |
|
| Q |
1032 |
taaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcactccc |
1131 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||| |||||| |
|
|
| T |
15357642 |
taaactccatagattgctttccttgacatagcgccattccttttcttctcgtttaaaacgtaagaaacttcctagtgcttttgccgcaagaggaactccc |
15357741 |
T |
|
| Q |
1132 |
ccac |
1135 |
Q |
| |
|
|||| |
|
|
| T |
15357742 |
ccac |
15357745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 537
Target Start/End: Original strand, 16413349 - 16413879
Alignment:
| Q |
7 |
tgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtacttgcttg |
106 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||| |||||||| || ||||||||||| |||||||||| | ||| |||| ||||| |||||| | |
|
|
| T |
16413349 |
tgaggttgaagctcttcaagaatcttctcaacattttcttgtaattgggagtcttcatttctcccccatgacaatttcaagttgttcacgtgcttgctcg |
16413448 |
T |
|
| Q |
107 |
acatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgctaaaag |
206 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || | ||||| |
|
|
| T |
16413449 |
acatatttgcttctttggcattcatcacacttttaactctctccaagtgcttaatgtaaagatctcctttaaggttcatttgtcctagttcctccaaaag |
16413548 |
T |
|
| Q |
207 |
atacccttttttcatgccaactacgaatagtgttaaagttttcaaggatgccaacatccttacatgcgggggcaagcttgaaagggaatagcagtctctc |
306 |
Q |
| |
|
| ||||| ||||| ||||||| || ||||| |||||||| || ||||| |||||||||||| |||| | ||||||||| | || || ||||||| || |
|
|
| T |
16413549 |
aaaccctcttttcttgccaacaacaaatagagttaaagtatttaaggaatccaacatccttatatgccgaggcaagcttaatagtgagtagcagttgttc |
16413648 |
T |
|
| Q |
307 |
aaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattccacaacg |
406 |
Q |
| |
|
||| |||||||||| ||||| ||||| ||||||| || ||||||| ||| ||| |||||||||||| ||||||||||||| |||||| | ||| |
|
|
| T |
16413649 |
aaagatagatgttgaagagccttcaattgtaccaaaccaccaggcaaccttttgaggatttgacaatagtctaactttaaaatcactaaattcaataact |
16413748 |
T |
|
| Q |
407 |
tacataaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaacttttcttttct |
506 |
Q |
| |
|
|||||||||||| |||||| | | || || |||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||| || | |
|
|
| T |
16413749 |
tacataaggatttcggaagactctcaaatttaccccaagaaagattcaagtatcttagatgttttaaacgaaaaattgaagatgacaactctttaagtag |
16413848 |
T |
|
| Q |
507 |
ctcaaagtcaagcactcgtaaagaataacat |
537 |
Q |
| |
|
| ||||||||| |||||||||||||||||| |
|
|
| T |
16413849 |
ttgaaagtcaagtactcgtaaagaataacat |
16413879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 724 - 1135
Target Start/End: Original strand, 15083013 - 15083424
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataatt |
823 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||| | ||||| |||||| ||| |||| || ||||||| |||||||||||||||||||||| |
|
|
| T |
15083013 |
gattgagcaagatcgtgaacaagatcgtgcatcttgaaacttgtaattttgccaaatacatctgtctcaatatcttgaaaaaatgatctacaatataatt |
15083112 |
T |
|
| Q |
824 |
cattccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttat |
923 |
Q |
| |
|
|||||||||| ||| || | ||||||| | | |||||||||| ||| || |||||||| || |||||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
15083113 |
cattccacacatcattgtcgatatcttcttcgtccaatattttattggacgaaataaagccattagccatccaaagctcaattagaaactgcttccttat |
15083212 |
T |
|
| Q |
924 |
aattccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattc |
1023 |
Q |
| |
|
||| |||| ||||||||||||||||| ||||| || ||||| |||| ||| | |||||||||||||||||||| ||||| ||||||||| | ||| |
|
|
| T |
15083213 |
tattgcatctttgggaaatagtgcacagaaggcaaaacattgtctcagtttaagcggcaaattcaagtaacttaatctcaacgcaggcatggcataatct |
15083312 |
T |
|
| Q |
1024 |
tcaccttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagag |
1123 |
Q |
| |
|
||| |||||||||||||||| ||||||||||| ||||| |||| || ||||| | | |||||| ||||||||||||||||||||| |||| ||||||| |
|
|
| T |
15083313 |
tcatcttgtaaactccatagtttgctttccttcacatagtgccactctttttcctctgttttaaagcgcaagagacttcctagtgctattgcagcaagag |
15083412 |
T |
|
| Q |
1124 |
gcactcccccac |
1135 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
15083413 |
gcgctcccccac |
15083424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 729 - 1135
Target Start/End: Original strand, 16396737 - 16397143
Alignment:
| Q |
729 |
agcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattc |
828 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||| |||||| | || | |||| || ||||||||| || ||||||||||||||| |
|
|
| T |
16396737 |
agcaagatcatgaacaagatcatgcatcttgaatattgtaatttggccaaatcccacattctctgtattttcgaaaaatgacctccaatataattcattc |
16396836 |
T |
|
| Q |
829 |
cacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattc |
928 |
Q |
| |
|
|||||||| | || || || | ||||||||| |||| ||| || ||||| || |||||||| |||||||| || |||| || |||||| ||||||||| |
|
|
| T |
16396837 |
cacacctcgttaccaatgtcatctgcttccaacatttgattggaagaaatgaagccgttagctgtccaaagatcaattaaaagctgcttgcttataattt |
16396936 |
T |
|
| Q |
929 |
catccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcacc |
1028 |
Q |
| |
|
|||| |||||||||| |||||| |||| ||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
16396937 |
catctttgggaaataatgcacagaaggaaaagcattgccttaattttactggcaaatgcaagtaacttaatctcaaggcaggcatgacataagcttcacc |
16397036 |
T |
|
| Q |
1029 |
ttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcact |
1128 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||| | | |
|
|
| T |
16397037 |
ttgtaaattccatagcttgctttccttgacatatagccattccttttcttctcttttaaaccgcaagagacttcctagtgctattgctgcaagagggaat |
16397136 |
T |
|
| Q |
1129 |
cccccac |
1135 |
Q |
| |
|
||||||| |
|
|
| T |
16397137 |
cccccac |
16397143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 712 - 1131
Target Start/End: Original strand, 15335683 - 15336099
Alignment:
| Q |
712 |
tcttcagcaatagattgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatc |
811 |
Q |
| |
|
||||| |||| | ||||||||||||||||||||||||||||||| ||||||| | ||| ||||||| || | || || ||||||| |||||||||| |
|
|
| T |
15335683 |
tcttctgcaacatattgagcaagatcatgaacaagatcatgcattttgaaact---agttttcccaaattgatctatctcaatatcttgaaaaaatgatc |
15335779 |
T |
|
| Q |
812 |
tacaatataattcattccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaa |
911 |
Q |
| |
|
| |||||||||||||||||||||||| |||| ||||| ||||||| ||||||| || |||||||| || |||||| |||| || || |||||||| |
|
|
| T |
15335780 |
tccaatataattcattccacacctcattgccaatatcaccatcttccaacttttcatttgaagaaataaagccattagccatccagagttctattagaaa |
15335879 |
T |
|
| Q |
912 |
ctgcttacttataattccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggc |
1011 |
Q |
| |
|
|| || ||||| | | ||| |||||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||||| |||||||||||| |
|
|
| T |
15335880 |
gtgttttcttattagtttatctttgggaaagagtgcacacaaggcaaaacactgtctcaattttactggtaaattcaaataacttagtctcaaggcaggc |
15335979 |
T |
|
| Q |
1012 |
atgaccgaattctcaccttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgctt |
1111 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||| | || ||| |||| ||||||||||||||||||| |
|
|
| T |
15335980 |
atgactgaattatcaccttgtaaactccatagcttgctttccttgacatagagccactcattttcgtctcttttgaaacacaagagacttcctagtgcta |
15336079 |
T |
|
| Q |
1112 |
ttgctgcaagaggcactccc |
1131 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
15336080 |
ttgccgcaagaggcactccc |
15336099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 745 - 1135
Target Start/End: Original strand, 15331261 - 15331651
Alignment:
| Q |
745 |
agatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattccacacctcactgccta |
844 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||| || |||| || ||||||||||||||||||| | |||||||||||||||||| || |||| | |
|
|
| T |
15331261 |
agatcatgcatcttgaaacttgtaattttgccaaatatatctgtctcaatatcttggaaaaatgatctcaagtataattcattccacaccccattgccaa |
15331360 |
T |
|
| Q |
845 |
tatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattccatccttgggaaatag |
944 |
Q |
| |
|
|||||| | ||||| |||||||| ||||||| || || |||||| |||||||||| |||||||||| ||||||||| || |||| ||| |||||| |
|
|
| T |
15331361 |
tatcttcctcgtccaacatttcattagatgaaaccaagccattagccatccaaagctcaattagaaacttcttacttattctttcatctttgataaatag |
15331460 |
T |
|
| Q |
945 |
tgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcaccttgtaaactccatagc |
1044 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||| ||| ||||||||||||||| |
|
|
| T |
15331461 |
agcacagaaggcaaagcattgtctcaattttactggcaaattcaagtaacttaatctcaaggtaggcatgacataatcttcatcttgtaaactccataat |
15331560 |
T |
|
| Q |
1045 |
ttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcactcccccac |
1135 |
Q |
| |
|
||||||||||||||||| |||| || ||| | | || |||||||||||||||||||||||||||| ||||||||||||| ||||| |||| |
|
|
| T |
15331561 |
ttgctttccttgacatagtgccactcatttacctctcttttaaaacgcaagagacttcctagtgctattgctgcaagaggtactccgccac |
15331651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 1 - 564
Target Start/End: Original strand, 15334972 - 15335535
Alignment:
| Q |
1 |
tgagtttgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaact-tgtccacgtac |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||| ||||||||||| ||| | ||| | || | |
|
|
| T |
15334972 |
tgagtttgaggttgaagcacttcaagaatctcctcaacattttcttgtaaatgagactcttcatttctctcccatgacaatctcaattgtgttaa-gttc |
15335070 |
T |
|
| Q |
100 |
ttgcttgacatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctg |
199 |
Q |
| |
|
|| || |||||||| |||||||||||||| | ||||||||| |||||||||||||||||||| ||||| ||||||| |||||| | | |||| | ||| |
|
|
| T |
15335071 |
ttactcgacatattggcttccttggcattaaatacactttttactctctccaagtgcttaatataaagatctcctttaaggtttagtggtcccagttctt |
15335170 |
T |
|
| Q |
200 |
ctaaaagatacccttttttcatgccaactacgaatagtgttaaagttttcaaggatgccaacatccttacatgcgggggcaagcttgaaagggaatagca |
299 |
Q |
| |
|
| ||||| | |||||| || | |||||||| | ||||||||||||| ||| || | |||||| || |||||||||||||| | || ||||| |
|
|
| T |
15335171 |
ccaaaaggaatccttttctcttcccaactacataacaagttaaagttttcagggaaatcagcttccttatattggggggcaagcttgataatgagtagca |
15335270 |
T |
|
| Q |
300 |
gtctctcaaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattc |
399 |
Q |
| |
|
|| ||||||||| | |||||||||||||| ||| || || ||||||| || |||||| | ||||| || |||||| |||||||| |||||| |
|
|
| T |
15335271 |
gttggtcaaatatatacactgtagagctttcaattgtgtcaaacaactaggcaagttaaggagatgataacaattgtctaacttcaaaatctgtaaattc |
15335370 |
T |
|
| Q |
400 |
cacaacgtacataaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaactttt |
499 |
Q |
| |
|
||||| ||||||||||||| ||| |||||| ||| || || ||| |||||||||||||||||||| |||| || |||||||||||| |||||||||| |
|
|
| T |
15335371 |
cacaatgtacataaggattttggtagagttttgaacttaccatcagatagattcaagtaccttagatactttagactaccaattgaagatgacaactttt |
15335470 |
T |
|
| Q |
500 |
cttttctctcaaagtcaagcactcgtaaagaataacatctcaatacatggggtgagagttggtca |
564 |
Q |
| |
|
| |||| |||||||||||||| |||||| |||||||| |||||||||| ||||| ||||||||| |
|
|
| T |
15335471 |
ttcttctttcaaagtcaagcacccgtaaataataacatttcaatacatgaggtgaaagttggtca |
15335535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 727 - 1135
Target Start/End: Complemental strand, 15429638 - 15429229
Alignment:
| Q |
727 |
tgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcat |
826 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||| || |||||| |||||| ||| | || || |||||| ||||| ||||| ||||||| ||||| |
|
|
| T |
15429638 |
tgagcgagatcatgaacaagatcgtgcatcttgaaacttataatttcgccaaatacatctctctcaaaatcttgaaaaaaggatctccaatatatttcat |
15429539 |
T |
|
| Q |
827 |
tccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataat |
926 |
Q |
| |
|
||||||| ||| | | ||||||| | ||||| |||||||| || |||||||| | |||||| ||||||||| ||||| |||||||||||||| | |
|
|
| T |
15429538 |
tccacacatcattcgcgatatcttcctcgtccaacatttcattggaagaaataaagtcattagccatccaaagctgaattagtaactgcttacttattct |
15429439 |
T |
|
| Q |
927 |
tccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagt-aacttaacctcaaggcaggcatgaccgaattctc |
1025 |
Q |
| |
|
| |||| |||||||||| |||||| ||||| || ||||| |||| ||| || ||||||||||||| ||||||| ||||| ||||||||||| | || |
|
|
| T |
15429438 |
ttcatctttgggaaataatgcacagaaggcaaaacattgtctcagtttaactggcaaattcaagtaaacttaatctcaatgcaggcatgacattttcttc |
15429339 |
T |
|
| Q |
1026 |
accttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggc |
1125 |
Q |
| |
|
| |||||||| |||||| ||||||||||||| ||| ||||| |||||||| | || |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
15429338 |
atcttgtaaattccatattttgctttccttgatatagcgccactccttttcctctcttttaaagcgcaagagacttcctagtgcttttgctgcaagaggt |
15429239 |
T |
|
| Q |
1126 |
actcccccac |
1135 |
Q |
| |
|
|||||||||| |
|
|
| T |
15429238 |
actcccccac |
15429229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 729 - 1129
Target Start/End: Original strand, 16403329 - 16403729
Alignment:
| Q |
729 |
agcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattc |
828 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || || ||||| |||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16403329 |
agcaagttcatgaacaagatcatgcatcttaaatgatgtaatttgaccaaattcatctgtctcagtatcttggaaaaatgatctccaatataattcattc |
16403428 |
T |
|
| Q |
829 |
cacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattc |
928 |
Q |
| |
|
||||||||| | || | | ||| ||| ||||| |||| ||| |||||||| || || ||||| |||||||||| || | || ||||| || |||||| |
|
|
| T |
16403429 |
cacacctcattaccaacaccttctgcatccaacatttgattggatgaaatgaagccattagcaatccaaagctcaatcatgaagtgcttgctcataattt |
16403528 |
T |
|
| Q |
929 |
catccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcacc |
1028 |
Q |
| |
|
|||| |||||||||| |||||| |||| || || || ||||||||||| |||||||| | |||||||| | ||||||| | |||| ||| ||||| |
|
|
| T |
16403529 |
catctttgggaaataatgcacaaaaggaaaaacactgtctcaattttactggcaaattgaggtaacttagttttaaggcagacttgacgtaatcttcacc |
16403628 |
T |
|
| Q |
1029 |
ttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcact |
1128 |
Q |
| |
|
|| ||||||||||||||| |||||||| ||||| |||| || ||||||| || |||||| ||||| ||||||||||||||| |||| |||||||| ||| |
|
|
| T |
16403629 |
ttctaaactccatagcttactttccttcacatagagccactctttttcttctcttttaaaccgcaaaagacttcctagtgctattgccgcaagagggact |
16403728 |
T |
|
| Q |
1129 |
c |
1129 |
Q |
| |
|
| |
|
|
| T |
16403729 |
c |
16403729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 729 - 1135
Target Start/End: Complemental strand, 15453477 - 15453071
Alignment:
| Q |
729 |
agcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattc |
828 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | || || ||||||||| |||| | |||| |||||||| |||||| |||||||||||||| |
|
|
| T |
15453477 |
agcaagatcatgaacaaaatcatgcatcttgaatactgcagattgaccaaattcacctgtctcggtatgttggaaaagtgatctccaatataattcatta |
15453378 |
T |
|
| Q |
829 |
cacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattc |
928 |
Q |
| |
|
||||||||| || | ||||| ||||||||| |||| ||| || |||||||| || ||| |||||||||| |||| | || ||| |||||| || |
|
|
| T |
15453377 |
cacacctcatgaccaacatcttctgcttccaacatttgattagaagaaataaaaccattacaaatccaaagctcaattatcatcttcttgcttatagttt |
15453278 |
T |
|
| Q |
929 |
catccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcacc |
1028 |
Q |
| |
|
|| | |||||||||| |||||| |||| || ||||| |||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||| || || |
|
|
| T |
15453277 |
cacctttgggaaataatgcacagaaggaaaaacattgtctcaattttattggcaaattgaagtagcttaatctcaaggcaggcatgacagaattttcgcc |
15453178 |
T |
|
| Q |
1029 |
ttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcact |
1128 |
Q |
| |
|
|||||||||||| || ||||||| ||||||||| |||| || ||||||| || ||||||||||||||||||||||||||| ||||||| | ||| ||| |
|
|
| T |
15453177 |
ttgtaaactccaaagtttgcttttcttgacatagagccactctttttcttctcttttaaaacgcaagagacttcctagtgcaattgctgccaaaggaact |
15453078 |
T |
|
| Q |
1129 |
cccccac |
1135 |
Q |
| |
|
|| |||| |
|
|
| T |
15453077 |
cctccac |
15453071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 711 - 1132
Target Start/End: Original strand, 16414044 - 16414465
Alignment:
| Q |
711 |
ctcttcagcaatagattgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgat |
810 |
Q |
| |
|
|||||| | ||| ||||||||||||||||| ||||| || ||||| ||||| | ||||| ||||||| ||| | || ||||||| ||||||||| |
|
|
| T |
16414044 |
ctcttctgtaatggattgagcaagatcatgtacaaggtcgtgcattttgaatttttgaatttttccaaatccatcatgctcaatatcttgaaaaaatgat |
16414143 |
T |
|
| Q |
811 |
ctacaatataattcattccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaa |
910 |
Q |
| |
|
|| |||||||| ||||||||||||||| |||| ||||||| || || || || |||| ||||||| ||| || || ||| ||||||| || || | || |
|
|
| T |
16414144 |
ctccaatataactcattccacacctcattgccaatatcttctgtttgtaacatagcattggatgaaagaaaaccatttgccatccaaaggtcaatcaaaa |
16414243 |
T |
|
| Q |
911 |
actgcttacttataattccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcagg |
1010 |
Q |
| |
|
||| ||| |||| ||| |||| ||||||||||||||||| |||| || ||||| |||||||| || || |||||||||||||||||||| |||||||| |
|
|
| T |
16414244 |
acttcttgtttattatttcatctttgggaaatagtgcacagaaggaaaaacattgtctcaatttaactggtaaattcaagtaacttaaccttaaggcagg |
16414343 |
T |
|
| Q |
1011 |
catgaccgaattctcaccttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgct |
1110 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||||||||||||||||||| |||| || |||| | || ||| ||||||||||||||||||| ||| |
|
|
| T |
16414344 |
catgacgcagttctcaccttgtaaatcccatagcttgctttccttgacattgagccactctatttcctctcttttgaaacgcaagagacttcctaatgcc |
16414443 |
T |
|
| Q |
1111 |
tttgctgcaagaggcactcccc |
1132 |
Q |
| |
|
|||| |||||||| ||||||| |
|
|
| T |
16414444 |
attgcggcaagaggtactcccc |
16414465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 718 - 1132
Target Start/End: Original strand, 17927649 - 17928063
Alignment:
| Q |
718 |
gcaatagattgagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaat |
817 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||| | || || |||| || ||| | |||||| |||||||| || |||| |
|
|
| T |
17927649 |
gcaaaagattgagcaagatcatgaacaagatcatgcattttgaaatgtgtaaccatacctaatttatctgtttgaacatcttgaaaaaatgaactccaat |
17927748 |
T |
|
| Q |
818 |
ataattcattccacacctcactgcctatatcttgtgcttccaatatttcattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgctt |
917 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||| ||||||| || ||||| ||||| || ||| |||||| || ||||||| |||||| |
|
|
| T |
17927749 |
ataattcattccacacctcatcaccaatatcttccgcttccaaactttcattggacgaaatgaatccattggccacccaaagttcaattagaagctgctt |
17927848 |
T |
|
| Q |
918 |
acttataattccatccttgggaaatagtgcacacaaggcgaagcattgcctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgacc |
1017 |
Q |
| |
|
|||||| | | |||| || ||||||| ||| | ||||| |||||||| ||||| || || ||||| | |||||||||||| |||||||| ||||||| |
|
|
| T |
17927849 |
acttattaattcatcttttggaaatatagcagagaaggcaaagcattgtctcaacttaaccggcaagtacaagtaacttaatctcaaggcctgcatgaca |
17927948 |
T |
|
| Q |
1018 |
gaattctcaccttgtaaactccatagcttgctttccttgacataacgccattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctg |
1117 |
Q |
| |
|
|| |||||||||||||| ||||| | |||||| ||||||||||| |||||| ||||||| || |||||| ||||| |||||||||| || | |||||| |
|
|
| T |
17927949 |
gagttctcaccttgtaagctccacaacttgctgtccttgacatagatccattctttttcttctcttttaaagcgcaacagacttcctaatgttattgctg |
17928048 |
T |
|
| Q |
1118 |
caagaggcactcccc |
1132 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
17928049 |
caagaggcactcccc |
17928063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 17926926 - 17927138
Alignment:
| Q |
7 |
tgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtacttgcttg |
106 |
Q |
| |
|
||||||||||||||||| ||||||| ||| |||||| | |||||||| || ||||||||||| ||||||||||| ||| | || || || || || | |
|
|
| T |
17926926 |
tgaggttgaagcacttcgagaatctgctcgacatttccttgtaattgggactcttcatttctcccccatgacaacctcaattggttcaagtgtttactgg |
17927025 |
T |
|
| Q |
107 |
acatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgctaaaag |
206 |
Q |
| |
|
||||||| ||||| ||||||| |||||||||| |||||||| | |||||| |||| ||| ||||||| |||||| | ||||||||| ||| | ||||| |
|
|
| T |
17927026 |
acatattggcttctttggcatgtgttacactttttactctctctaggtgcttgatgtgaagctctcctttaaggtttagttgtcctaattcttccaaaag |
17927125 |
T |
|
| Q |
207 |
atacccttttttc |
219 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
17927126 |
gtaccctcttttc |
17927138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 378 - 488
Target Start/End: Original strand, 15320585 - 15320695
Alignment:
| Q |
378 |
taactttaaaatctgcaaattccacaacgtacataaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacga |
477 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||| |||||| |||||| || | |||| ||| |||||| |||||| |||||||||||||||||| | |
|
|
| T |
15320585 |
taactttaaaatttgcaaattccacaactgacatatggattccggaagaatttcaaaatcacccgaagaaaaattcaaataccttagatattttaaatta |
15320684 |
T |
|
| Q |
478 |
ccaattgaaga |
488 |
Q |
| |
|
||||||||||| |
|
|
| T |
15320685 |
ccaattgaaga |
15320695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 728 - 837
Target Start/End: Complemental strand, 15421761 - 15421652
Alignment:
| Q |
728 |
gagcaagatcatgaacaagatcatgcatcttgaaacatacaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcatt |
827 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||| || |||||| |||||| ||| | || || |||||| ||||||||||| ||||| | |||||| |
|
|
| T |
15421761 |
gagcgagatcatgaacaagatcgtgcatcttgaaacttataatttcaccaaatacatctctctcaaaatcttgaaaaaatgatctccaatacagttcatt |
15421662 |
T |
|
| Q |
828 |
ccacacctca |
837 |
Q |
| |
|
|||||||||| |
|
|
| T |
15421661 |
ccacacctca |
15421652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 311 - 493
Target Start/End: Complemental strand, 15422175 - 15421993
Alignment:
| Q |
311 |
atagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattccacaacgtaca |
410 |
Q |
| |
|
||||||||||||||||||||||| ||| || | | |||||||| |||||||| ||| ||||| || ||| || |||| || |||||||||||| |||| |
|
|
| T |
15422175 |
atagatgttgtagagctttcaagcgtatcaaattattaggcaaattttggagttttctacaatggtctaatttcaaaacttgtaaattccacaacttaca |
15422076 |
T |
|
| Q |
411 |
taaggattctggaagagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgaca |
493 |
Q |
| |
|
|| ||||| |||||||||| | || || || |||||||| ||||||||||| | || ||| ||||||||||||| |||| |
|
|
| T |
15422075 |
tatggattttggaagagtttcaaatttaccatcagaaagatccaagtaccttaaactcttcaaatgaccaattgaagatgaca |
15421993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 429
Target Start/End: Original strand, 15082595 - 15082718
Alignment:
| Q |
306 |
caaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattccacaac |
405 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | | |||||||| || |||| ||| |||||||| ||| || ||||| || |||||||||||| |
|
|
| T |
15082595 |
caaatatagatgttgtagagctttcaagtgtatcaaattattaggcaatattcggaggtttctacaatagtgtaatttcaaaatttgtaaattccacaac |
15082694 |
T |
|
| Q |
406 |
gtacataaggattctggaagagtt |
429 |
Q |
| |
|
|||||| ||| | ||||||||| |
|
|
| T |
15082695 |
ttacatagagatgccggaagagtt |
15082718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 311 - 429
Target Start/End: Complemental strand, 15430051 - 15429933
Alignment:
| Q |
311 |
atagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattccacaacgtaca |
410 |
Q |
| |
|
||||||||||||||||||||||||||| || | | |||||||| ||||| | | |||||||| ||| |||||||| || |||||||||||| |||| |
|
|
| T |
15430051 |
atagatgttgtagagctttcaagtgtatcaaattattaggcaatttttgtaagctaaaacaatagtctaattttaaaatttgtaaattccacaacttaca |
15429952 |
T |
|
| Q |
411 |
taaggattctggaagagtt |
429 |
Q |
| |
|
|| ||||| |||||||||| |
|
|
| T |
15429951 |
tatggattttggaagagtt |
15429933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 15320217 - 15320439
Alignment:
| Q |
7 |
tgaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtacttgcttg |
106 |
Q |
| |
|
||||||||||| ||||||||||||| ||| ||||||||||| ||||| || ||| || |||| ||||| |||||| ||| | || || ||| || |
|
|
| T |
15320217 |
tgaggttgaagaacttcaagaatctgctcgacattttcctgcaattgggactctgcagttctctcccacgacaaccacaaaaggctcaagtgcttactaa |
15320316 |
T |
|
| Q |
107 |
acatattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgctaaaag |
206 |
Q |
| |
|
||||||| ||||| || |||| |||||||||| |||||||| | |||||| |||| ||| ||||||| ||| || | ||||||||| || || ||||| |
|
|
| T |
15320317 |
acatattggcttctttagcatctgttacacttttcactctctcaaggtgcttgatgtgaagctctcctttaagatttagttgtcctaattccgccaaaag |
15320416 |
T |
|
| Q |
207 |
atacccttttttcatgccaacta |
229 |
Q |
| |
|
||||| |||| ||||||||| |
|
|
| T |
15320417 |
gaaccctcttttgttgccaacta |
15320439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 15430346 - 15430292
Alignment:
| Q |
10 |
ggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcat |
64 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||| || ||||| |||||||||| |
|
|
| T |
15430346 |
ggttgaagcacttcaagaatctgctccacattttcttgcaattgggattcttcat |
15430292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 30206653 - 30206691
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30206653 |
gattgagcaagatcatggacaagatcatgcatcttgaaa |
30206691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 15422252 - 15422196
Alignment:
| Q |
306 |
caaatatagatgttgtagagctttcaagtgtaccagactcttaggcaacttttggag |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | | |||||||| | |||||| |
|
|
| T |
15422252 |
caaatatagatgttgtagagctttcaagtgtatcaaattattaggcaattgttggag |
15422196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 454 - 494
Target Start/End: Original strand, 16396444 - 16396484
Alignment:
| Q |
454 |
aagtaccttagatattttaaacgaccaattgaagacgacaa |
494 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16396444 |
aagtatcttagatattttagacgaccaattgaagacgacaa |
16396484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 16402591 - 16402663
Alignment:
| Q |
9 |
aggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaac |
81 |
Q |
| |
|
|||||||||| |||| ||||||| ||||| |||||| |||| ||| || |||||||||| |||||||||||| |
|
|
| T |
16402591 |
aggttgaagcgcttctagaatctgctcaatattttcttgtagttgggagacttcatttctttcccatgacaac |
16402663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 29853442 - 29853480
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
29853442 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
29853480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 29872305 - 29872343
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
29872305 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
29872343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 30242347 - 30242309
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
30242347 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
30242309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 30338497 - 30338459
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
30338497 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
30338459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 30435947 - 30435985
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
30435947 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
30435985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 30483535 - 30483573
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
30483535 |
gattgagcgagatcatggacaagatcatgcatcttgaaa |
30483573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 30521600 - 30521562
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
30521600 |
gattgagcaagatcatggacaagatcatgcaacttgaaa |
30521562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 30561940 - 30561902
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
30561940 |
gattgagcaagatcatggacaagatcatgcaacttgaaa |
30561902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 761
Target Start/End: Original strand, 30060500 - 30060537
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaa |
761 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
30060500 |
gattgagcaagatcatggacaaggtcatgcatcttgaa |
30060537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 761
Target Start/End: Original strand, 30749774 - 30749811
Alignment:
| Q |
724 |
gattgagcaagatcatgaacaagatcatgcatcttgaa |
761 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
30749774 |
gattgagcaagatcatggacaagatcatgaatcttgaa |
30749811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 190; Significance: 1e-102; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 666 - 1135
Target Start/End: Original strand, 8187107 - 8187576
Alignment:
| Q |
666 |
ttcagacatacttggtatgccactatcatttgtaatgtgacagatctcttcagcaatagattgagcaagatcatgaacaagatcatgcatcttgaaacat |
765 |
Q |
| |
|
|||||||||||| || |||||| | |||||||||| ||| | |||||| | |||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
8187107 |
ttcagacatactaggcatgccattgtcatttgtaacacaacaaacctcttctgatatagattgagcaagatcatgtacaagatcatgcatcttgaaatat |
8187206 |
T |
|
| Q |
766 |
acaatttctccaaattcatttgtcccagtatcttggaaaaatgatctacaatataattcattccacacctcactgcctatatcttgtgcttccaatattt |
865 |
Q |
| |
|
| ||||| ||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||| | ||||| | |||| |
|
|
| T |
8187207 |
ataatttttccaaattcatctgtcataatatcttggaaaaatgatctccaatataattcattccatacctcattgccaatatcctcagcttctagaattt |
8187306 |
T |
|
| Q |
866 |
cattcgatgaaataaatccgttagccgtccaaagctcgattagaaactgcttacttataattccatccttgggaaatagtgcacacaaggcgaagcattg |
965 |
Q |
| |
|
|||| ||||||||||| || |||||| |||| || || ||||| || ||||| |||| | | |||| || ||||| |||||||| ||||| || ||||| |
|
|
| T |
8187307 |
cattggatgaaataaaaccattagccatccatagatcaattaggaattgcttttttattaattcatcttttggaaaaagtgcacaaaaggcaaaacattg |
8187406 |
T |
|
| Q |
966 |
cctcaattttacaggcaaattcaagtaacttaacctcaaggcaggcatgaccgaattctcaccttgtaaactccatagcttgctttccttgacataacgc |
1065 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| || |||||| |||||| || |
|
|
| T |
8187407 |
tctcaattttattggcaaattcaagtaacttaatctcaaggcaggcatgactgtattctcaccttgtaaactccatagattactttccaagacatagagc |
8187506 |
T |
|
| Q |
1066 |
cattccttttcttgtcgtttaaaacgcaagagacttcctagtgcttttgctgcaagaggcactcccccac |
1135 |
Q |
| |
|
|| |||||||| | || |||||||||||||||||||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
8187507 |
cactccttttcctctcttttaaaacgcaagagacttcctagtgctattgctgcaagaggtacacccccac |
8187576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 325 - 564
Target Start/End: Original strand, 8186634 - 8186873
Alignment:
| Q |
325 |
gctttcaagtgtaccagactcttaggcaacttttggagattttgacaatagtttaactttaaaatctgcaaattccacaacgtacataaggattctggaa |
424 |
Q |
| |
|
|||||||| ||||||| ||| || |||||||||||||| |||||| || | ||| || | ||||||||||| |||| |||||||||||||||||| |
|
|
| T |
8186634 |
gctttcaattgtaccaaactatttggcaacttttggagggattgacagtaatctaagttaatcatctgcaaatttttcaacttacataaggattctggaa |
8186733 |
T |
|
| Q |
425 |
gagttacgaaatttccccaagaaagattcaagtaccttagatattttaaacgaccaattgaagacgacaacttttcttttctctcaaagtcaagcactcg |
524 |
Q |
| |
|
||||| ||| | || ||||||||||||||||||||||||||| ||||||||||||||||| || | ||||| |||||||||| |||||| ||| |
|
|
| T |
8186734 |
gagtttggaagtcaccgttagaaagattcaagtaccttagatatttcaaacgaccaattgaagatgatagctttttccttctctcaaaatcaagcgctct |
8186833 |
T |
|
| Q |
525 |
taaagaataacatctcaatacatggggtgagagttggtca |
564 |
Q |
| |
|
||||||||||||| |||| | || ||||| ||||||||| |
|
|
| T |
8186834 |
taaagaataacatttcaaaatataaggtgacagttggtca |
8186873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 8186317 - 8186528
Alignment:
| Q |
8 |
gaggttgaagcacttcaagaatctcctcaacattttcctgtaattgtgattcttcatttctatcccatgacaactccaacttgtccacgtacttgcttga |
107 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| ||| || || ||||||||||| ||||| |||||| ||| | || || | || || || |
|
|
| T |
8186317 |
gaggttgaagcgcttcaagaatctcctcaacattttcttgtgatacagactcttcatttctctcccacgacaacaacaattggttcaaatgtttactcga |
8186416 |
T |
|
| Q |
108 |
catattagcttccttggcattcattacacttttaactctctccaagtgcttaatgtaaaggtctccttgaaggttcatttgtcctaactctgctaaaaga |
207 |
Q |
| |
|
||| || ||||| ||||||| ||| |||| ||| |||||||| | |||||| |||||||||||||||| ||||||| |||| |||| ||||| ||||| |
|
|
| T |
8186417 |
catgttggcttctttggcatccatgacacattttactctctctaggtgcttgatgtaaaggtctcctttgaggttcaattgttctaattctgccaaaagt |
8186516 |
T |
|
| Q |
208 |
tacccttttttc |
219 |
Q |
| |
|
||||| ||||| |
|
|
| T |
8186517 |
aaccctcttttc |
8186528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 719 - 762
Target Start/End: Original strand, 52352084 - 52352127
Alignment:
| Q |
719 |
caatagattgagcaagatcatgaacaagatcatgcatcttgaaa |
762 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
52352084 |
caattgattgagcaagatcatgtacaagatcatgcatcttgaaa |
52352127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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