View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21636_high_28 (Length: 276)
Name: NF21636_high_28
Description: NF21636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21636_high_28 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 8091489 - 8091255
Alignment:
| Q |
19 |
aaaatttccaattagcatattccaagtaatactaaaatatcaaattggtcgctaaatttagcatctttaacacttaacgataaaattagagatggatttc |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
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| T |
8091489 |
aaaatttccaattagcatattccaagtaatactaaaatatcaaattggtcgctaaatttagcatctttaacacttagcgataaaattagagatgaatttc |
8091390 |
T |
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| Q |
119 |
gctttgttctatctgttaagttcggttgttatttcaactttttctaatagttaacacggtgagaagtgatatttacctctttcatgacatcatcattttg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8091389 |
gctttgttctatctgttaagttcggttgttatttcaactttttctaatagttaacacggtgagaagtgatatttacctctttcatgacatcatcattttg |
8091290 |
T |
|
| Q |
219 |
cagccgcgaaggaagggcattcttaatattcttgg |
253 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
8091289 |
cagccgcgaaggaagggcattcttaatattattgg |
8091255 |
T |
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