View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21637_high_24 (Length: 285)
Name: NF21637_high_24
Description: NF21637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21637_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 278
Target Start/End: Original strand, 13858711 - 13858970
Alignment:
| Q |
18 |
agaaatcacaattgctagctggggtctggcgtgctaatagtcatcgtatatcattgccatcatcagtcctttctactaataatatgcccattgatgcgct |
117 |
Q |
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| T |
13858711 |
agaaatcacaattgctagttggggtcaggc-tgctaatagtcatcgtatatcattgccatcatcagtcctttctgctaataatatgcccattgatgcgct |
13858809 |
T |
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| Q |
118 |
tgttgttgctgctaatcgaactctgttgcctgttgtatactatccaaggtatatttaatttgctctaagccttgcctaaccaaggttaatttatagtata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13858810 |
tgttgttgctgctaatcgaactctgttgcctgttgtatactatccagggtatatttaatttgctctaagccttgcctaaccaaggttaatttatagtata |
13858909 |
T |
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| Q |
218 |
acaaatacaaacttttggattaggatatacttttcttgagtgtaatgtctgtttcttctca |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
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| T |
13858910 |
acaaatacaaacttttggattaggatatacttttcttgagtgtaatgtttgtttctgctca |
13858970 |
T |
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