View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21639_low_1 (Length: 372)
Name: NF21639_low_1
Description: NF21639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21639_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 38566093 - 38566450
Alignment:
| Q |
1 |
gaatatttgtaagcactttgacgccaagataataagagaatatgatcagaagttgtgtactttgtatttgtgatgaataatgatgtcaatggtaaagttg |
100 |
Q |
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| T |
38566093 |
gaatatttgtaagcactttgacgccaagttaataagagaataagattagaagttgtgtactttgtatttatgatgaataatgatgtcaactgtaaagtcg |
38566192 |
T |
|
| Q |
101 |
tttgatggttgatgaccgttacagtgtggcgcgctattaatgtcgagctcatacccattaggtgtcatcaaggtgttttagaacggaggattttttacta |
200 |
Q |
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| T |
38566193 |
tttgatggttgatgaccgttacagtgtggcgcgctattaatgtcgagctcaaacccatt-----------agatgttttagaatggaggattttttacta |
38566281 |
T |
|
| Q |
201 |
atcttttgagaaattggtgagaaagaaagtttaaagttacttg------tttggtcgaatggacatattcagggcagagtgttattggactttatattca |
294 |
Q |
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| T |
38566282 |
atcttttgagaaattggtgagatagaaagtttaaagttactggacttgatttggtcgaatggacatattcagggcagagtgttgttgaactttatattca |
38566381 |
T |
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| Q |
295 |
tgcaatttaaagttaagattctctccaattttttcatcaccaatattttaaatttataaatagaataat |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38566382 |
tgcaatttaaagttaagattctctccaattttttcatcaccaatattttaaatttataaatagaataat |
38566450 |
T |
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