View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21639_low_2 (Length: 222)
Name: NF21639_low_2
Description: NF21639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21639_low_2 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3225743 - 3225538
Alignment:
| Q |
1 |
aatccatgagatatattaggttatagttttaacccattcctagagacgttacacatgaccacaatttccatgtttaattactctagtctaaacttatgtt |
100 |
Q |
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| T |
3225743 |
aatccatgagacatattaggttatagtttgaacccattcctagagaagttacacatgaccacaatgtccatgtttaattactctagtctaaacttatgtt |
3225644 |
T |
|
| Q |
101 |
aattacactttggtaaatttacaggtcaatggaagcagaagaaaacaacacaagaagggaaatgaggcaaaaaggtaaaaaacatgatggaccatgtgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3225643 |
aattacactttggtaaatttacaggtcaatggaagcagaagaaaacaacacaagaagggaaatgaggcaaaaaggtaaaaaacatgatggaccatgtgaa |
3225544 |
T |
|
| Q |
201 |
gcaacc |
206 |
Q |
| |
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|||||| |
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|
| T |
3225543 |
gcaacc |
3225538 |
T |
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