View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2163_high_4 (Length: 339)
Name: NF2163_high_4
Description: NF2163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2163_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 26606731 - 26606408
Alignment:
| Q |
8 |
tagcataggcattcagatctatttgattgtgaatcaatctcatttacctatatagaaaatggaactgtgaaacattacctaatttatttat-------ct |
100 |
Q |
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| T |
26606731 |
tagcataggcattcagatctatttgattttgaatcaatctcatttacctatatagaaaatggaactgtgaaacattgcctaatttatttatatttaatct |
26606632 |
T |
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| Q |
101 |
ccaaattcctttgttcttttgggagaacaaaagtaaaaggnnnnnnnnntgaaagcgtgcattattgagacatcatccacgttataaactcaccatctta |
200 |
Q |
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| T |
26606631 |
ctaaatttctttgttcttttgggagaacaaaagtaaaaggaaaaaaaaatgaaagcgtgcattattgagacatcatccacgttataaactcaccatctta |
26606532 |
T |
|
| Q |
201 |
atggccctccaaattgtgtgagaaaatgactagtagttctaatcctcaaaaggtaatgtactaaccaaaagaagaaaaggagaaaaaatatgtcatttat |
300 |
Q |
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| T |
26606531 |
atggccctccaaattatgtgagaaaatgactagtagttctaatcctcaaaaggtaatgtactagccaaaagaagaaaaggagaaaaaatatgtcatttat |
26606432 |
T |
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| Q |
301 |
ttccatatattgatgtacagttgt |
324 |
Q |
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|||||||||||||||||||||||| |
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| T |
26606431 |
ttccatatattgatgtacagttgt |
26606408 |
T |
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