View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2163_low_15 (Length: 250)
Name: NF2163_low_15
Description: NF2163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2163_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 48662889 - 48662652
Alignment:
| Q |
1 |
tgaggaaccaaaccgagtctcagttttgtaaggactagaatgagtcttcactctagtagtaagtcataagtttaaaagctacttgaagtatcttatcaag |
100 |
Q |
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| T |
48662889 |
tgaggaaccaaaccgagtctcagttttttaaggactagaatgaatcttcactctagtggtaagtcataagtttcaaagctacttgaagtatcttatcaag |
48662790 |
T |
|
| Q |
101 |
aaatgttacaagcaactcagataaactctgatatcaaatacatctaaacatacttataagttataagctagtcaaataagataaaactttcctatttatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
48662789 |
aaatgttacaagcaactcagataaactctgatatcaaatacatctaaacatacttataagttataagctagtcaaataagataaaactttccgatttatc |
48662690 |
T |
|
| Q |
201 |
taagcaatcatagtcttattcatagagctttttgtctg |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
48662689 |
taagcaatcatagtcttattcatagagctttttgtctg |
48662652 |
T |
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