View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2163_low_6 (Length: 326)
Name: NF2163_low_6
Description: NF2163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2163_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 3017065 - 3016768
Alignment:
| Q |
13 |
aaggtagatggtggatctttgtgtaatccgagtaacttaggatttggtggtcttattcgtaactctaatggtgagtggcatggagagtttcgtgtctgtt |
112 |
Q |
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| T |
3017065 |
aaggtagatggtagatctttgtgtaatccgagtaacttaggatttggtggtcttattcgtaactctaatggtgagtggcatggagagtttcgtgtctgtt |
3016966 |
T |
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| Q |
113 |
gtggtacaacaaccaatggtaatgcaaaactttctgtcatagtcttcggtttacaatatgtctattgtctgggacgagagccacatacatcttgcgttgg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3016965 |
gtggtacaacaaccaatggtaatgcaaaactttctgccatagccttcggtttacaatatgtctattgtctgggacgagagccacatacatcttgcgttgg |
3016866 |
T |
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| Q |
213 |
attctcagacagttttggatcttatcgttgaaggcacctcaaatatgactctttcattcccttggtgaagcatattaagaggtttcgtgatctggaat |
310 |
Q |
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||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
3016865 |
attctcagacaattttagatcttatcgttgaaggcacctcaaatatgactctttcattcccttggtgaagcatattaagaggtttcatgatctggaat |
3016768 |
T |
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