View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2163_low_7 (Length: 321)
Name: NF2163_low_7
Description: NF2163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2163_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 45461998 - 45462297
Alignment:
| Q |
1 |
agagttgtatacaaaccaaagaaataacttcttgtctatgaatcaaagtgcttcttatttgtgcttaannnnnnnnnnnnncacgataaaaaattagtct |
100 |
Q |
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| T |
45461998 |
agagttgtatacaaaccaaagaaataacttcttgtctatgaatcaaagtgcttcttatttgtgcttaatttttttttt---cacgataaaaaattagtct |
45462094 |
T |
|
| Q |
101 |
atttcattaaaaatcaaaggatcgatgcaagccgaaatgtaaataaagatgagaactgacattatatatgagcagccatattagactctcttagaaaact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
45462095 |
atttcattaaaaatcaaaggatcgatgcaagccgaaatgtaaataaagatgagaactgacattatatatgagcagccatgttagactctcttagaaaact |
45462194 |
T |
|
| Q |
201 |
ccagatggattgatggaatacatggcaccttttgaatcgaacgagaaaaagatttgcttaaaatccatatcccgcatcaactctatggctggtatggtaa |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
45462195 |
ccagatggattgatggaatacatggcaccttttgaatcgaacgagaaaaagatttgcttaaaatccatatcccgcgtcaactctatggctggtatggtaa |
45462294 |
T |
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