View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21643_low_33 (Length: 206)
Name: NF21643_low_33
Description: NF21643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21643_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 40429213 - 40429391
Alignment:
| Q |
16 |
gtaatgataggaggagattcataatacagatgcatatactttttagctcaaataggatcaagaggaacttgcttcgacaacagactcagcaggtaaacct |
115 |
Q |
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| T |
40429213 |
gtaatgataggaggagattcataatacagatgcatatactttttagctcaaataggatcaagaggaacttgcttcgacaacagactcagcaggtaaacct |
40429312 |
T |
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| Q |
116 |
ttaactgtgatagtaatatgacaagtacgttttagaatccggttagcccgtccttgagctcgtggtcttgttcatttca |
194 |
Q |
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| T |
40429313 |
ttaactgtgatagtaatatgacaagtacgttttagaatctggttagcccgtccttgagctcgtggtcttgttcttttca |
40429391 |
T |
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