View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21646_high_3 (Length: 335)
Name: NF21646_high_3
Description: NF21646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21646_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 44426412 - 44426102
Alignment:
| Q |
17 |
aagtatataattgcttaaatcgggtacattctgctttccaaggagaaggttttatgattaattaagtagttatttcagtttgaatataggaaatcatgtt |
116 |
Q |
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| T |
44426412 |
aagtatataattgcttaaaccgggtacattctgctttccaaggagaaggttttatgattaattaagtagttatttcagtttgaatataggaaatcatgtt |
44426313 |
T |
|
| Q |
117 |
tggatgttgctcatcgctcaatgggttggcaggatcacgacctgattagtggtatttagtatttactgacatgattcaccatagtttgaactagcttggc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
44426312 |
tggatgttgctcatcgctcaatgggttggcaggatcacgacctgattagtggtatttagtatttactgacatgattcaccatagtttgaactggcttggc |
44426213 |
T |
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| Q |
217 |
tttgttattactaggaggatatgcatgaagtgtaacaacgatatccttgatgtcatctaaaattgatcttgaaagtcagcacacaacgatctttcttagg |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44426212 |
tttgttattactaggaggatatgcatgaagtgtaacaacgatatccttggcgtcacctaaaattgatcttgaaagtcagcacacaacgatctttcttagg |
44426113 |
T |
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| Q |
317 |
tttcctatgct |
327 |
Q |
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||||||||||| |
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| T |
44426112 |
tttcctatgct |
44426102 |
T |
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