View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21647_high_3 (Length: 490)

Name: NF21647_high_3
Description: NF21647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21647_high_3
NF21647_high_3
[»] chr8 (7 HSPs)
chr8 (15-428)||(23745876-23746289)
chr8 (205-450)||(21208566-21208811)
chr8 (205-436)||(14887299-14887530)
chr8 (345-434)||(22835377-22835466)
chr8 (355-450)||(18236943-18237038)
chr8 (355-450)||(18246394-18246489)
chr8 (314-450)||(20748585-20748721)
[»] scaffold0163 (1 HSPs)
scaffold0163 (15-450)||(19803-20229)
[»] scaffold0066 (1 HSPs)
scaffold0066 (22-397)||(1799-2175)
[»] chr3 (7 HSPs)
chr3 (27-450)||(40089318-40089732)
chr3 (102-450)||(2159231-2159579)
chr3 (205-450)||(6426807-6427052)
chr3 (205-450)||(8977346-8977591)
chr3 (205-423)||(16406109-16406327)
chr3 (268-450)||(9541699-9541881)
chr3 (314-436)||(28360381-28360503)
[»] chr1 (1 HSPs)
chr1 (15-450)||(20175248-20175674)
[»] chr5 (12 HSPs)
chr5 (278-468)||(21081392-21081582)
chr5 (15-171)||(21081583-21081737)
chr5 (205-450)||(20952361-20952606)
chr5 (205-450)||(27416631-27416876)
chr5 (205-450)||(18384240-18384485)
chr5 (205-450)||(26197921-26198166)
chr5 (205-450)||(33943820-33944065)
chr5 (268-436)||(19381388-19381556)
chr5 (314-450)||(30450278-30450414)
chr5 (355-450)||(24296248-24296343)
chr5 (314-450)||(24416794-24416930)
chr5 (388-436)||(26040415-26040463)
[»] chr2 (7 HSPs)
chr2 (205-450)||(27165576-27165821)
chr2 (205-436)||(45018850-45019081)
chr2 (205-450)||(9509360-9509605)
chr2 (205-450)||(18655718-18655963)
chr2 (351-436)||(22103160-22103245)
chr2 (265-416)||(22906705-22906856)
chr2 (349-449)||(24721287-24721387)
[»] scaffold0313 (2 HSPs)
scaffold0313 (205-436)||(14057-14288)
scaffold0313 (306-436)||(1-131)
[»] chr6 (4 HSPs)
chr6 (205-450)||(24927761-24928006)
chr6 (205-450)||(16902446-16902691)
chr6 (205-450)||(31361319-31361564)
chr6 (205-423)||(18164565-18164783)
[»] scaffold0145 (1 HSPs)
scaffold0145 (268-450)||(33497-33679)
[»] chr4 (5 HSPs)
chr4 (268-436)||(16269619-16269787)
chr4 (205-450)||(6696718-6696963)
chr4 (268-436)||(17155979-17156147)
chr4 (314-450)||(26816455-26816591)
chr4 (314-450)||(54695462-54695598)
[»] scaffold0254 (1 HSPs)
scaffold0254 (205-450)||(13574-13819)
[»] chr7 (11 HSPs)
chr7 (205-450)||(6538977-6539222)
chr7 (205-450)||(8505549-8505794)
chr7 (205-450)||(16137780-16138025)
chr7 (205-450)||(32102880-32103125)
chr7 (205-450)||(46501614-46501859)
chr7 (205-436)||(9540850-9541081)
chr7 (205-450)||(5387511-5387756)
chr7 (205-450)||(26353895-26354140)
chr7 (205-450)||(44901857-44902102)
chr7 (268-436)||(18663448-18663616)
chr7 (314-450)||(15179700-15179836)
[»] scaffold0611 (1 HSPs)
scaffold0611 (268-436)||(2509-2677)
[»] scaffold0141 (1 HSPs)
scaffold0141 (303-436)||(30481-30614)
[»] scaffold0049 (1 HSPs)
scaffold0049 (303-436)||(84198-84331)
[»] scaffold0764 (1 HSPs)
scaffold0764 (308-436)||(6489-6617)
[»] scaffold0059 (1 HSPs)
scaffold0059 (346-450)||(46020-46124)
[»] scaffold0003 (1 HSPs)
scaffold0003 (268-416)||(153135-153283)
[»] scaffold0572 (1 HSPs)
scaffold0572 (339-450)||(13-124)
[»] scaffold0142 (1 HSPs)
scaffold0142 (345-436)||(32516-32607)
[»] scaffold0028 (1 HSPs)
scaffold0028 (314-450)||(99976-100112)
[»] scaffold0010 (2 HSPs)
scaffold0010 (355-450)||(261085-261180)
scaffold0010 (355-450)||(263388-263483)
[»] scaffold0233 (1 HSPs)
scaffold0233 (314-450)||(6858-6994)


Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 15 - 428
Target Start/End: Complemental strand, 23746289 - 23745876
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| | |    
T  23746289 agatgaacatcattattctagtcatcaacaaacttctgatatatcaaaacaaaaggatgaagacgaaccaaattcatcttctctatccattcgtccaagc 23746190  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||||||||||||||||||| |||||  |||||| ||||| ||||||| ||||||||  ||| ||||  ||||||||   |    
T  23746189 tggaaatcagttgttgatcatcctaaagagttaatcatttgtgactctgctgataaagtaagaacaagatcatcataacaacacaaatcaaacatggtta 23746090  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    ||||||||| |||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||    
T  23746089 tgatttctcaaatagagccaaaatccataaatgaagttatcactaatcaatcatggattgaagccatgacttaagagctttctcaatttgagagaaacaa 23745990  T
Q  315 agtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaac 414  Q
    ||| ||||||| ||| |||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  23745989 agtctggaattcggtacctgaacctcaagacgaaaccatcattggaacaagatgggtgttcagagatatactagatgaaaatggtaaggttgtcagaaac 23745890  T
Q  415 aaggcaagattagt 428  Q
    |||| |||||||||    
T  23745889 aaggaaagattagt 23745876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 21208811 - 21208566
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  21208811 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 21208712  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  21208711 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 21208612  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  21208611 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 21208566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 436
Target Start/End: Complemental strand, 14887530 - 14887299
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| ||   |||| | || |||||||| |||||||  || || |||||| | | ||    
T  14887530 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattcttgatgactcttggattgaggccatgaaggaggaactttctcagtttg 14887431  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| || || ||  |   |||| |||||| |||||||||||||||||||||||| ||||| || || ||| ||   ||||||||    
T  14887430 aaagaaacaaagtttggaacttagttccaaataatcaagacaaaagcatcattggaacaagatgggtgtttagaaacaagcttgataaaggaggtaaggt 14887331  T
Q  405 tgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||| ||||| |||||||||||||    
T  14887330 tgtcagaaacaaagcaaggttagttgctcaag 14887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 22835377 - 22835466
Alignment:
Q  345 caaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctca 434  Q
    ||||| ||||||||| ||||||| ||| ||||||||||| || |||||| | |||||||||||||||||||| ||||| |||||||||||    
T  22835377 caaaaccatcattggtacaagataggttttcagaaataagcttgatgaagaaggtaaggttgtcagaaacaatgcaaggttagttgctca 22835466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 450
Target Start/End: Original strand, 18236943 - 18237038
Alignment:
Q  355 attggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||||||||||||||||| || ||||||||||| |||||| | || || ||| ||||||| || || ||||||||||| ||||  || |||||||||    
T  18236943 attggaacaagatgggtttttagaaataaactagatgaagaaggaaaagttatcagaaataaagccagattagttgcacaaggctacaatcaacaa 18237038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 450
Target Start/End: Original strand, 18246394 - 18246489
Alignment:
Q  355 attggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||||||||||||||||| || ||||||||||| |||||| | || || ||| ||||||| || || ||||||||||| ||||  || |||||||||    
T  18246394 attggaacaagatgggtttttagaaataaactagatgaagaaggaaaagttatcagaaataaagccagattagttgcacaaggctacaatcaacaa 18246489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 20748585 - 20748721
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  |||||||||||||||||| || || |||||||||||  ||||| | || || ||| | |||||    
T  20748585 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgagtatttagaaataaactaaatgaagaaggaaaagttataagaaa 20748684  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  20748685 caaagctagattggtagctcaagggtacaatcaacaa 20748721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 15 - 450
Target Start/End: Original strand, 19803 - 20229
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||          ||||||||| | |    
T  19803 agatgaacctcatcattctagtcatcaacaaacctctgatatatcaaaacaaaaggatgaagatgaaccagattcatt---------cattcctccaagc 19893  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |    
T  19894 tggaaatcagttgttgatcatccaaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggcta 19993  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    ||||||||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  19994 tgatttctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgactgaagagctttctcagtttgaaagaaacaa 20093  T
Q  315 agtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaac 414  Q
    ||| |||||||| || |||||||||| | |||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| || |||||||||    
T  20094 agtctggaatttagtacctgaacctcgagacaaaaccatcattggaacaagatgggtgttcagaaataaactagatgaagatggtaaagtggtcagaaac 20193  T
Q  415 aaggcaagattagttgctcaagattataatcaacaa 450  Q
    || |||||| |||||||||||| |||||||||||||    
T  20194 aaagcaagactagttgctcaaggttataatcaacaa 20229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 22 - 397
Target Start/End: Complemental strand, 2175 - 1799
Alignment:
Q  22 catcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaactgaaaat 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||| ||||    
T  2175 catcatcattctagtcatcaacaaacttctgatatatcaaaacaaaaggatgaagacgaaccaaattcatcttctctatccattcctccaagctggaaat 2076  T
Q  122 cagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaatgatttc 221  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||  ||||||||  |||| ||| |  |||||||    
T  2075 cagttgttgatcatcctaaagagttaatcattggtgacactgctgataaagtaagaacaagatcatcataacaagacaaatcaaatatggctttgatttc 1976  T
Q  222 tctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttgg 321  Q
    || |||||||||||||||||| |||||||  |||| | |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||    
T  1975 tcaaatagagccaaaatccataaatgaagttatcattaatcaatcatggattgaagccatgactgaagagctttctcaatttgagagaaacaaagtatgg 1876  T
Q  322 aatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgt-tcagaaataaactggatgaaaatg 397  Q
    |||||||| ||| ||| |||| || ||| |||||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  1875 aatttggtacctaaacatcaagacgaaaccatcattggaacaaaatgcgtgtgtcagaaatatactggatgaaaatg 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-113; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 27 - 450
Target Start/End: Complemental strand, 40089732 - 40089318
Alignment:
Q  27 tcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaactgaaaatcagtt 126  Q
    ||||||||  ||||||||||| |||||| |||||||||| ||| |||||||  ||||| ||||||          ||||||||| ||||| |||||||||    
T  40089732 tcattctagacatcaacaaacctctgatgtatcaaaacagaagaatgaagatgaaccaaattcatt---------cattcctccaaactggaaatcagtt 40089642  T
Q  127 gctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaatgatttctctaa 226  Q
    | ||||||||||||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |||||||||| ||    
T  40089641 gttgatcatcctaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggctatgatttctcaaa 40089542  T
Q  227 tagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaattt 326  Q
    | |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  40089541 tggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgactgaagaactttctcaatttgaaagaaacaaagtctggaattt 40089442  T
Q  327 ggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagatta 426  Q
     || |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||| || || |||||||| |||||| ||    
T  40089441 agtacctgaacctcaagacaaaactatcattggaacaagatgggtgttcagaaataaactagatgaagatggtaaagtggtaagaaacaaagcaagacta 40089342  T
Q  427 gttgctcaagattataatcaacaa 450  Q
    || ||||||| |||||||||||||    
T  40089341 gtagctcaaggttataatcaacaa 40089318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 102 - 450
Target Start/End: Original strand, 2159231 - 2159579
Alignment:
Q  102 cattcctccgaactgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaag 201  Q
    ||||||||| | ||| |||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||| ||||||| ||||||||  ||||||||     
T  2159231 cattcctccaagctggaaatcagttgttgatcatcctaaagaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaa 2159330  T
Q  202 acaaacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaat 301  Q
    ||||||||| | ||||| |||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |||||| |||    
T  2159331 acaaacatggctatgatctctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgaatgaagaactttctcaat 2159430  T
Q  302 atgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaa 401  Q
     ||||||||||||||| |||||||| || |||||||| | | |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  2159431 ttgaaagaaacaaagtctggaatttagtacctgaaccacgagacaaaaccatcattggaacaagatgggtgttcagaaataaactagatgaagatggtaa 2159530  T
Q  402 ggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
     |||||||||||||| |||||  |||||||||||| |||||||||||||    
T  2159531 agttgtcagaaacaaagcaaggctagttgctcaaggttataatcaacaa 2159579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 6426807 - 6427052
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  6426807 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 6426906  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| |||||||| || || |||||| | ||||||||    
T  6426907 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaggt 6427006  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  6427007 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 6427052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 8977346 - 8977591
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  8977346 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 8977445  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  8977446 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 8977545  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  8977546 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 8977591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 205 - 423
Target Start/End: Original strand, 16406109 - 16406327
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  16406109 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 16406208  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| |||||||| || || |||||| | ||||| ||    
T  16406209 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaagt 16406308  T
Q  405 tgtcagaaacaaggcaaga 423  Q
    |||||||||||| ||||||    
T  16406309 tgtcagaaacaaagcaaga 16406327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 450
Target Start/End: Original strand, 9541699 - 9541881
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||| | |||||||  ||||| |||||| | | ||||||||||||||||||||| ||||| ||  |   |||| | |||| |||||||||||||||||    
T  9541699 tggattaaggccatgaaggaagaactttctcagtttgaaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagat 9541798  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||| || ||||| || || |||||| | ||||| |||||||||||||| ||| | ||||||||||||| ||| || ||||||    
T  9541799 gggtttttagaaacaagcttgatgaagaaggtaaagttgtcagaaacaaagcacggttagttgctcaaggttacaaccaacaa 9541881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 436
Target Start/End: Complemental strand, 28360503 - 28360381
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  |||||||||||||||||| || || |||||||||||  ||||| | || || ||| |||||||    
T  28360503 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgtgtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 28360404  T
Q  414 caaggcaagattagttgctcaag 436  Q
    ||| || ||||| || |||||||    
T  28360403 caaagctagattggtagctcaag 28360381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 450
Target Start/End: Original strand, 20175248 - 20175674
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| || |||||||||||  ||||||||||| ||||||||||||||||||||  |||||||  || || ||||||          ||||||||| | |    
T  20175248 agatgaacctcatcattctagacatcaacaaacatctgatatatcaaaacaaaaaaatgaagatgaaacaaattcata---------cattcctccaagc 20175338  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaagtgagaacaacatcatcatctcaagacaagacaaacatgacaa 214  Q
    || |||||||||| ||||||||| ||| | |||||||||||||||| |||||| ||||| ||||||| ||||||||  |||||||| ||||||||| | |    
T  20175339 tggaaatcagttgttgatcatccaaaaaaattaatcattggtgacactgctgataaagtaagaacaagatcatcattccaagacaaaacaaacatggcta 20175438  T
Q  215 tgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaa 314  Q
    |||| |||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  20175439 tgatatctcaaatggagccaaaatccataaatgaagctatcattgatcaatcatggattgaagccatgaatgaagaactttctcaatttgaaagaaacaa 20175538  T
Q  315 agtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaac 414  Q
    ||| |||||||| || ||| |||| | | |||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  20175539 agtctggaatttagtacctaaaccacgagacaaaaccatcattggaacaagatgggtgttcagaaataaactagatgaagatggtaaagttgtcagaaac 20175638  T
Q  415 aaggcaagattagttgctcaagattataatcaacaa 450  Q
    || |||||  |||||||||||| |||||||||||||    
T  20175639 aaagcaaggctagttgctcaaggttataatcaacaa 20175674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 2e-72; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 278 - 468
Target Start/End: Complemental strand, 21081582 - 21081392
Alignment:
Q  278 ccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcag 377  Q
    ||||||||||| |||||||| ||| ||| || |||||||| |||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||||    
T  21081582 ccatgactgaatagctttctcaatttgagaggaacaaagtctggaatttggtatctgaacctcaagacaaaaccatcattggaacaagatgggtgttcag 21081483  T
Q  378 aaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaaaaagtctattttgatgat 468  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  21081482 aaataaactggatgaaaatggtaaggttgtcagaaacaagccaagattagttgctcaaggttataatcaacaagaagtctattttgatgat 21081392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 21081737 - 21081583
Alignment:
Q  15 agatggacatcatcattctattcatcaacaaacttctgatatatcaaaacaaaaggatgaagacaaaccagattcatcttctctatccattcctccgaac 114  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||  | ||| | |    
T  21081737 agatgaacatcatcattctagtcatcaacaaacttctgatatatcaaaacaaaatgttgaagacgaaccagattcatcttctctatcca--cgtccaagc 21081640  T
Q  115 tgaaaatcagttgctgatcatcctaaagagttaatcattggtgacagtgctgacaaa 171  Q
    || |||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  21081639 tggaaattagttgttgatcatcctaaagagttaatcatttgtgacactgctgacaaa 21081583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 20952361 - 20952606
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| |||| |||| | |||||||||||||||||||  ||||| |||||| | | ||    
T  20952361 aacatggcaatgatttctcaattggaacctaagtcaatcaatgaagccatcattgatgactcatggattgaagccatgaaggaagaactttctcagtttg 20952460  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||| |||||||||||||| || ||  |   ||||| ||||| ||||||||||||||||||||| ||||| || || || |||||| | ||||||||    
T  20952461 aaagaaataaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcaggaacaagcttgatgaagaaggtaaggt 20952560  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| |||||  |||| ||||||| ||| |||||||||    
T  20952561 tgtcagaaacaaagcaaggctagtagctcaaggttacaatcaacaa 20952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 27416631 - 27416876
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||||||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  27416631 aacatgacaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 27416730  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| |||||||||||||| |||||| |||||||| ||||| |||||| | ||||||||    
T  27416731 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaacatgggttttcagaaacaaacttgatgaagaaggtaaggt 27416830  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  27416831 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 27416876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 18384240 - 18384485
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  18384240 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 18384339  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  18384340 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 18384439  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  18384440 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 18384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 26198166 - 26197921
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  26198166 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 26198067  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  26198066 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 26197967  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  26197966 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 26197921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 33943820 - 33944065
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  33943820 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 33943919  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||| | ||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  33943920 aaagaaatagagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 33944019  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  33944020 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 33944065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 268 - 436
Target Start/End: Complemental strand, 19381556 - 19381388
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||| | |||||| | | ||||||||||||||||||||| || || ||  |   ||||  ||||| ||||||||| |||||||    
T  19381556 tggattgaggccatgaaagaataactttctcagtttgaaagaaacaaagtttggaacttagttccaaatgatcaaggcaaaaccatcattggtacaagat 19381457  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
     ||| |||||||| || || |||||| | ||||||||||| |||||||| ||||| |||||||||||||    
T  19381456 aggttttcagaaacaagcttgatgaagaaggtaaggttgttagaaacaaagcaaggttagttgctcaag 19381388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 450
Target Start/End: Complemental strand, 30450414 - 30450278
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||| |||||||    
T  30450414 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 30450315  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  30450314 caaagctagattggtagctcaagggtacaatcaacaa 30450278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 450
Target Start/End: Complemental strand, 24296343 - 24296248
Alignment:
Q  355 attggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||||||||||||||||| || ||||||||||| |||||| | || || ||| ||||||| || || ||||||||||| ||||  || |||||||||    
T  24296343 attggaacaagatgggtttttagaaataaactagatgaagaaggaaaagttatcagaaataaagccagattagttgcacaaggctacaatcaacaa 24296248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 24416794 - 24416930
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||  |||||||    
T  24416794 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagtcatcagaaa 24416893  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  24416894 caaagctagattggtagctcaagggtacaatcaacaa 24416930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 26040463 - 26040415
Alignment:
Q  388 gatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||||| ||   ||||||||||||||||||||| |||||||    
T  26040463 gatgaaaatggtaatgtaaccagaaacaaggcaagattagtagctcaag 26040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 27165821 - 27165576
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| |||| |||| | |||||||||||||||||||  ||||| |||||| | | ||    
T  27165821 aacatggcaatgatttctcaattggaacctaagtcaatcaatgaagccatcattgatgactcatggattgaagccatgaaggaagaactttctcagtttg 27165722  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    |||||||||||||||||||||| || ||  |   ||||| ||||| ||||||||||||||||||||| ||||| || || || |||||| | ||||||||    
T  27165721 aaagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcaggaacaagcttgatgaagaaggtaaggt 27165622  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| |||||  |||| ||||||| ||| |||||||||    
T  27165621 tgtcagaaacaaagcaaggctagtagctcaaggttacaatcaacaa 27165576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 436
Target Start/End: Original strand, 45018850 - 45019081
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  45018850 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagctattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 45018949  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||| |||||||||||  | || ||  |   |||| |||||| ||||||||||||||||||||| |||||||| ||||| |||||| | ||||||||    
T  45018950 aaagaaaaaaagtttggaacctagttccaaataatcaagacaaaaccatcattggaacaagatgggttttcagaaacaaacttgatgaagaaggtaaggt 45019049  T
Q  405 tgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||| ||||| |||||||||||||    
T  45019050 tgtcagaaacaaagcaaggttagttgctcaag 45019081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 9509605 - 9509360
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  9509605 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 9509506  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  9509505 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 9509406  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  9509405 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 9509360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 18655718 - 18655963
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  18655718 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 18655817  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||| ||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  18655818 aaagaaacagagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 18655917  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  18655918 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 18655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 22103160 - 22103245
Alignment:
Q  351 catcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||||||||||||||| |||||||| || |||||| |||  || ||||  ||||||||||||||||| ||||||||||    
T  22103160 catcattggaacaagatgggtgtttagaaataagcttgatgaagatgacaaagttgctagaaacaaggcaagattggttgctcaag 22103245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 416
Target Start/End: Original strand, 22906705 - 22906856
Alignment:
Q  265 tcatggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaa 364  Q
    ||||||||||| |||||||  ||||| |||||| | |  ||||||||||||||||||||||| || ||  |   ||||| | ||| ||||||| ||||||    
T  22906705 tcatggattgaggccatgaaggaagaactttcttagttagaaagaaacaaagtttggaatttagttccaaataatcaaagcgaaaccatcattagaacaa 22906804  T
Q  365 gatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaa 416  Q
    ||||| | || ||||| || || |||||| | ||||||||| ||||||||||    
T  22906805 gatggatttttagaaacaagcttgatgaagaaggtaaggttttcagaaacaa 22906856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 449
Target Start/End: Complemental strand, 24721387 - 24721287
Alignment:
Q  349 aacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaac 448  Q
    ||||| |||||||||| |||||| |||||||| || ||| ||||| | ||| | || ||||||||||| |||||| | |||||||||| ||| | |||||    
T  24721387 aacattattggaacaaaatgggtattcagaaacaagctgaatgaacaaggtgaagtagtcagaaacaaagcaagacttgttgctcaaggttacagtcaac 24721288  T
Q  449 a 449  Q
    |    
T  24721287 a 24721287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 205 - 436
Target Start/End: Original strand, 14057 - 14288
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| | | || || || || || |||||||| || | |||| | |||||||||||||||||||  ||||| |||||| ||| ||    
T  14057 aacatggcaatgatttctcaattggaacccaagtcaatcaatgaagccattattgatgactcatggattgaagccatgaaggaagaactttctcaatttg 14156  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    |||||||||||||||||||||| || ||  |   ||||| ||||| ||||||||||||||||||||| |||||||| || || |||||| | ||||||||    
T  14157 aaagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaggt 14256  T
Q  405 tgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||| |||||  |||| |||||||    
T  14257 tgtcagaaacaaagcaaggctagtagctcaag 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 436
Target Start/End: Original strand, 1 - 131
Alignment:
Q  306 aagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggtt 405  Q
    ||||||||||||||||||||| || ||  |   ||||| ||||| ||||||||||||||||||||| |||||||| || || |||||| | |||||||||    
T  1 aagaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaggtt 100  T
Q  406 gtcagaaacaaggcaagattagttgctcaag 436  Q
    ||||||||||| |||||  |||| |||||||    
T  101 gtcagaaacaaagcaaggctagtagctcaag 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 24928006 - 24927761
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  24928006 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 24927907  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| |||||||| || || |||||| | ||||||||    
T  24927906 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaggt 24927807  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  24927806 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 24927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 16902446 - 16902691
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | | ||    
T  16902446 aacatggcaatgatctctcaaatggaacccaagtcaataaatgaagccattattgatgactcttggattgaggccatgaaggaagaactttctcagtttg 16902545  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||||||    
T  16902546 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaggt 16902645  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  16902646 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 16902691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 31361319 - 31361564
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  31361319 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 31361418  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  31361419 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 31361518  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  31361519 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 31361564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 423
Target Start/End: Original strand, 18164565 - 18164783
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  18164565 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 18164664  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  18164665 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 18164764  T
Q  405 tgtcagaaacaaggcaaga 423  Q
    |||||||||||| ||||||    
T  18164765 tgtcagaaacaaagcaaga 18164783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 268 - 450
Target Start/End: Complemental strand, 33679 - 33497
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| || || ||  ||  |||| |||||| |||||||||||||||||    
T  33679 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 33580  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||| |||||||| || || |||||| |  ||||||||||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  33579 gggttttcagaaacaagcttgatgaagaacgtaaggttgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 33497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 9e-31; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 268 - 436
Target Start/End: Original strand, 16269619 - 16269787
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| || || ||  ||  |||| |||||| |||||||||||||||||    
T  16269619 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 16269718  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||| |||||||| || || |||||| |  ||||||||||||||||||| ||||| |||||||||||||    
T  16269719 gggttttcagaaacaagcttgatgaagaacgtaaggttgtcagaaacaaagcaaggttagttgctcaag 16269787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 6696718 - 6696963
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  6696718 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 6696817  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  6696818 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 6696917  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  6696918 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 6696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 436
Target Start/End: Original strand, 17155979 - 17156147
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| || || ||  |   ||||  ||||| ||||||||| |||||||    
T  17155979 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaatgatcaaggcaaaaccatcattggtacaagat 17156078  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    | || |||| ||| || || |||||| | |||||||||||||||||||| ||||| |||||||||||||    
T  17156079 gagttttcataaacaagcttgatgaagaaggtaaggttgtcagaaacaaagcaaggttagttgctcaag 17156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 26816455 - 26816591
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||| |||||||    
T  26816455 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 26816554  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  26816555 caaagctagattggtagctcaagggtacaatcaacaa 26816591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 450
Target Start/End: Complemental strand, 54695598 - 54695462
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||| |||||||    
T  54695598 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 54695499  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  54695498 caaagctagattggtagctcaagggtacaatcaacaa 54695462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 13819 - 13574
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  13819 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 13720  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  13719 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 13620  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  13619 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 13574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 6538977 - 6539222
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  6538977 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 6539076  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  6539077 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 6539176  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  6539177 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 6539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 8505549 - 8505794
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| |||| |||||| | |||||||  ||||| |||||| | | ||    
T  8505549 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgaatcttggattaaggccatgaaggaagaactttctcagtttg 8505648  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||| ||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  8505649 aaagaaacagagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 8505748  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  8505749 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 8505794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 16138025 - 16137780
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| | |||||  ||||| |||||| | | ||    
T  16138025 aacatggcaatgatctctcaaatggaacccaagtcaataaatgaagccattattgatgactcttggattgaggtcatgaaggaagaactttctcagtttg 16137926  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||||||    
T  16137925 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaggt 16137826  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  16137825 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 16137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 32102880 - 32103125
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  32102880 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 32102979  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  32102980 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 32103079  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  32103080 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 32103125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 46501614 - 46501859
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  46501614 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 46501713  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  46501714 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 46501813  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  46501814 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 46501859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 205 - 436
Target Start/End: Complemental strand, 9541081 - 9540850
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||||| |||||||  ||||| |||||| | ||||    
T  9541081 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagctattattgatgactcttggattgaggccatgaaggaagaactttctcagtatg 9540982  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    |||||||||||||||||||  | || ||  |   | || |||||| ||||||||||||||||||| | |||||||| ||||| |||||| | ||||||||    
T  9540981 aaagaaacaaagtttggaacctagttccaaataattaagacaaaaccatcattggaacaagatggattttcagaaacaaacttgatgaagaaggtaaggt 9540882  T
Q  405 tgtcagaaacaaggcaagattagttgctcaag 436  Q
    ||||| |||||| ||||| |||||||||||||    
T  9540881 tgtcaaaaacaaagcaaggttagttgctcaag 9540850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 5387756 - 5387511
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||| | |||||| | | ||    
T  5387756 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaaaaactttctcagtttg 5387657  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  5387656 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 5387557  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  5387556 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 5387511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 450
Target Start/End: Complemental strand, 26354140 - 26353895
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| ||||||| |||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  26354140 aacatggcaatgatctctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 26354041  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||||||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  26354040 aaagaaacaaagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 26353941  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  26353940 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 26353895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 450
Target Start/End: Original strand, 44901857 - 44902102
Alignment:
Q  205 aacatgacaatgatttctctaatagagccaaaatccattaatgaagcaatcactgatcaatcatggattgaagccatgactgaagagctttctaaatatg 304  Q
    |||||| |||||||||||| ||| || || || || || |||||||| || | |||| | || |||||| | |||||||  ||||| |||||| | | ||    
T  44901857 aacatggcaatgatttctcaaatggaacccaagtcaatcaatgaagccattattgatgactcttggattaaggccatgaaggaagaactttctcagtttg 44901956  T
Q  305 aaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggt 404  Q
    ||||||||| ||||||||| ||||| ||  |   |||| | |||| ||||||||||||||||||||| || ||||| || || |||||| | ||||| ||    
T  44901957 aaagaaacagagtttggaacttggttccaaataatcaagataaaaccatcattggaacaagatgggtttttagaaacaagcttgatgaagaaggtaaagt 44902056  T
Q  405 tgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    |||||||||||| ||||| ||||||||||||| ||| || ||||||    
T  44902057 tgtcagaaacaaagcaaggttagttgctcaaggttacaaccaacaa 44902102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 436
Target Start/End: Original strand, 18663448 - 18663616
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  || || |||||| | | ||||||||||||||||||||| || || ||  |   ||||  ||||| |||||||||||||||||    
T  18663448 tggattgaggccatgagggaggaactttcttagtttgaaagaaacaaagtttggaacttagttccaaataatcaaggcaaaaccatcattggaacaagat 18663547  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    || | |||| ||| || || |||||| |  ||||||||||||||||||| ||||| || ||||||||||    
T  18663548 ggtttttcaaaaacaagcttgatgaagaaagtaaggttgtcagaaacaaagcaaggttggttgctcaag 18663616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 15179700 - 15179836
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||| |||||||    
T  15179700 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 15179799  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  15179800 caaagctagattggtagctcaagggtacaatcaacaa 15179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 436
Target Start/End: Original strand, 2509 - 2677
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| | | ||||||||||||||||||||| || || ||  ||  |||| |||||| |||||||||||||||||    
T  2509 tggattgaggccatgaaagaagaactttctcagtttgaaagaaacaaagtttggaacttagttccaaaaaatcaagacaaaaccatcattggaacaagat 2608  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||| |||||||| || || |||||| |   |||||||||||||||||| ||||| |||||||||||||    
T  2609 gggttttcagaaacaagcttgatgaagaatttaaggttgtcagaaacaaagcaaggttagttgctcaag 2677  T

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Target: scaffold0141 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 436
Target Start/End: Original strand, 30481 - 30614
Alignment:
Q  303 tgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaag 402  Q
    ||||||||||||||||||||| || || ||  |   ||||| ||||| ||||||||||||||||||||| |||||||| || || |||||| | || |||    
T  30481 tgaaagaaacaaagtttggaacttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggaaag 30580  T
Q  403 gttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||||| ||||| |||||||||||||    
T  30581 gttgtcagaaacaaagcaaggttagttgctcaag 30614  T

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Target: scaffold0049 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 436
Target Start/End: Complemental strand, 84331 - 84198
Alignment:
Q  303 tgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaag 402  Q
    ||||||||||||||||||||| || || ||  |   ||||| ||||| ||||||||||||||||||||| |||||||| || || |||||| | || |||    
T  84331 tgaaagaaacaaagtttggaacttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggaaag 84232  T
Q  403 gttgtcagaaacaaggcaagattagttgctcaag 436  Q
    |||||||||||||| ||||| |||||||||||||    
T  84231 gttgtcagaaacaaagcaaggttagttgctcaag 84198  T

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Target: scaffold0764 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 436
Target Start/End: Complemental strand, 6617 - 6489
Alignment:
Q  308 gaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgt 407  Q
    ||||||||||||||||||| || ||  |   ||||| ||||| ||||||||||||||||||||| |||||||| || || |||||| | |||||||||||    
T  6617 gaaacaaagtttggaatttagttccaaataatcaaagcaaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagaaggtaaggttgt 6518  T
Q  408 cagaaacaaggcaagattagttgctcaag 436  Q
    ||||||||| |||||  |||| |||||||    
T  6517 cagaaacaaagcaaggctagtagctcaag 6489  T

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Target: scaffold0059 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 46124 - 46020
Alignment:
Q  346 aaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatc 445  Q
    |||| ||||||||||||||||||||| |||||||| || || |||||| |||| || ||||||||||| || ||||| ||||||||||||| ||| || |    
T  46124 aaaaccatcattggaacaagatgggttttcagaaacaagcttgatgaagatggcaaagttgtcagaaataaagcaaggttagttgctcaaggttacaacc 46025  T
Q  446 aacaa 450  Q
    |||||    
T  46024 aacaa 46020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 268 - 416
Target Start/End: Original strand, 153135 - 153283
Alignment:
Q  268 tggattgaagccatgactgaagagctttctaaatatgaaagaaacaaagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagat 367  Q
    |||||||| |||||||  ||||| |||||| ||| |||| ||||||||||||||||||| ||  |  |   ||||| ||||| |||||||||||||||||    
T  153135 tggattgaggccatgaaggaagaactttctcaatttgaacgaaacaaagtttggaatttagttacaaataatcaaagcaaaaccatcattggaacaagat 153234  T
Q  368 gggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaa 416  Q
    |||| || ||||| || || |||||| | ||||||||| ||||||||||    
T  153235 gggttttaagaaacaagcttgatgaagaaggtaaggttatcagaaacaa 153283  T

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Target: scaffold0572 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 450
Target Start/End: Original strand, 13 - 124
Alignment:
Q  339 tcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagat 438  Q
    ||||| ||||| ||||||||||||||||||||| ||||  || || || |||||| | |||||||||||||||||||| |||||  |||| ||||||| |    
T  13 tcaaagcaaaaccatcattggaacaagatgggttttcaagaacaagcttgatgaagaaggtaaggttgtcagaaacaaagcaaggctagtagctcaaggt 112  T
Q  439 tataatcaacaa 450  Q
    || |||||||||    
T  113 tacaatcaacaa 124  T

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Target: scaffold0142 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 32607 - 32516
Alignment:
Q  345 caaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaag 436  Q
    ||||| |||||||||||||||||| || |||||||| ||||  |||||| | ||||||||||||||||  || ||||| |||||||||||||    
T  32607 caaaaccatcattggaacaagatgagttttcagaaacaaacatgatgaagaaggtaaggttgtcagaagaaaagcaaggttagttgctcaag 32516  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 450
Target Start/End: Complemental strand, 100112 - 99976
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||||| || |||||||||||  ||||| | || || ||| |||||||    
T  100112 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatgggtatttagaaataaactaaatgaagaaggaaaagttatcagaaa 100013  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  100012 caaagctagattggtagctcaagggtacaatcaacaa 99976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 450
Target Start/End: Original strand, 261085 - 261180
Alignment:
Q  355 attggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||||||||||||||||| || ||||||||||| |||||| | || || ||| ||||||| || || ||||||||||| ||||  || |||||||||    
T  261085 attggaacaagatgggtttttagaaataaactagatgaagaaggaaaagttatcagaaataaagccagattagttgcacaaggctacaatcaacaa 261180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 450
Target Start/End: Original strand, 263388 - 263483
Alignment:
Q  355 attggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaacaaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||||||||||||||||| || ||||||||||| |||||| | || || ||| ||||||| ||  | ||||||||||| ||||  || |||||||||    
T  263388 attggaacaagatgggtttttagaaataaactagatgaagaaggaaaagttatcagaaataaaaccagattagttgcacaaggctacaatcaacaa 263483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 6858 - 6994
Alignment:
Q  314 aagtttggaatttggtgcctgaacctcaaaacaaaaacatcattggaacaagatgggtgttcagaaataaactggatgaaaatggtaaggttgtcagaaa 413  Q
    |||| |||||| | || ||| ||||||||||  ||  ||||||||||||||||||| | || |||||||||||  ||||| | || || ||| |||||||    
T  6858 aagtatggaatcttgttcctaaacctcaaaatcaatccatcattggaacaagatggatatttagaaataaactaaatgaagaaggaaaagttatcagaaa 6957  T
Q  414 caaggcaagattagttgctcaagattataatcaacaa 450  Q
    ||| || ||||| || |||||||  || |||||||||    
T  6958 caaagctagattggtagctcaagggtacaatcaacaa 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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