View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21648_high_34 (Length: 247)
Name: NF21648_high_34
Description: NF21648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21648_high_34 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 30898035 - 30898281
Alignment:
| Q |
1 |
tctacagatacctgcccctcccaggaggtggtctaagcttagccaaggtctacgaaaaggattctggagaagggaactgatttaagatacaaagttcgaa |
100 |
Q |
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| T |
30898035 |
tctacagatacctgcccctcccaggaggtggtctaagcttagccaaggtctacgaaaaggattctggagaagggaactgatttaagatacaaagttcgaa |
30898134 |
T |
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| Q |
101 |
accccaaaaagaaagaagaaaagagttttgcactttatgatgagcaaagaaggatacttatgctttatctaacaaactgatgtagagtgattttgcaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30898135 |
accccaaaaagaaagaagaaaagagttttgcactttatgatgagcaaagaaggatacttatgctttatctaacaaactgatgtagagtgattttgcaaca |
30898234 |
T |
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| Q |
201 |
gtgagctctcgttctcaagtctcaaaatccacaggaggaactgtttc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30898235 |
gtgagctctcgttctcaagtctcaaaatccacaggaggaactgtttc |
30898281 |
T |
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