View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21648_high_38 (Length: 241)
Name: NF21648_high_38
Description: NF21648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21648_high_38 |
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Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 39272963 - 39272811
Alignment:
| Q |
60 |
gtaggaacacaatttcaacaccattcacaaacagaactgggcactttcaattccatatatataggaaatggaaaaacaaaacatcatatatcgcggttgg |
159 |
Q |
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| T |
39272963 |
gtaggaacacaatttcaacaccattcacaaacagaactgggcactttcaattccatatatataggaaatggaaaaacaaaacatcatatatcgcggttgg |
39272864 |
T |
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| Q |
160 |
tgtccttccaactcctacaattaccaagtccatgaagtaactgagcctatgct |
212 |
Q |
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| T |
39272863 |
tgtccttccaactcctacaattaccaagtccatgaagtaactgagcctatgct |
39272811 |
T |
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