View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21648_low_4 (Length: 601)

Name: NF21648_low_4
Description: NF21648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21648_low_4
NF21648_low_4
[»] scaffold1432 (1 HSPs)
scaffold1432 (51-519)||(627-1085)
[»] chr1 (57 HSPs)
chr1 (19-106)||(25274669-25274756)
chr1 (366-443)||(35536769-35536846)
chr1 (518-590)||(4102679-4102751)
chr1 (516-587)||(15811200-15811271)
chr1 (516-587)||(49907019-49907090)
chr1 (518-587)||(1039349-1039418)
chr1 (518-587)||(1046255-1046324)
chr1 (518-587)||(11741397-11741466)
chr1 (517-590)||(16456635-16456708)
chr1 (518-587)||(23541979-23542048)
chr1 (518-587)||(36694854-36694923)
chr1 (518-587)||(36710955-36711024)
chr1 (518-587)||(37951917-37951986)
chr1 (518-587)||(39497433-39497502)
chr1 (518-587)||(45039412-45039481)
chr1 (518-587)||(52431142-52431211)
chr1 (518-590)||(41855438-41855510)
chr1 (518-590)||(52601991-52602063)
chr1 (519-586)||(30289831-30289898)
chr1 (516-587)||(30290263-30290334)
chr1 (516-587)||(39363162-39363233)
chr1 (516-587)||(44649627-44649698)
chr1 (518-587)||(46075835-46075904)
chr1 (518-590)||(7763714-7763786)
chr1 (516-555)||(943637-943676)
chr1 (518-590)||(25509209-25509280)
chr1 (384-434)||(12178099-12178149)
chr1 (516-591)||(14171540-14171614)
chr1 (516-590)||(21631072-21631146)
chr1 (517-587)||(45335884-45335954)
chr1 (366-495)||(10645545-10645674)
chr1 (406-447)||(10645788-10645829)
chr1 (518-587)||(39750349-39750418)
chr1 (518-582)||(27037269-27037333)
chr1 (366-429)||(31061253-31061316)
chr1 (516-551)||(39497697-39497732)
chr1 (516-583)||(42872306-42872373)
chr1 (516-587)||(44646269-44646340)
chr1 (516-551)||(44646535-44646570)
chr1 (516-551)||(44649893-44649928)
chr1 (386-484)||(3142897-3142995)
chr1 (521-555)||(13343776-13343810)
chr1 (518-552)||(38920239-38920273)
chr1 (518-551)||(1047992-1048025)
chr1 (518-555)||(7783991-7784028)
chr1 (518-551)||(9202245-9202278)
chr1 (518-551)||(23542243-23542276)
chr1 (518-551)||(39362934-39362967)
chr1 (518-551)||(39750121-39750154)
chr1 (518-555)||(42276161-42276198)
chr1 (518-555)||(43456621-43456658)
chr1 (518-555)||(50008483-50008520)
chr1 (518-555)||(50937779-50937816)
chr1 (383-443)||(3371645-3371705)
chr1 (405-441)||(28843244-28843280)
chr1 (516-552)||(36695118-36695154)
chr1 (516-552)||(36711219-36711255)
[»] chr8 (67 HSPs)
chr8 (367-483)||(32884526-32884642)
chr8 (516-590)||(2944237-2944311)
chr8 (511-587)||(28192143-28192219)
chr8 (367-482)||(32879693-32879808)
chr8 (516-587)||(44251089-44251160)
chr8 (517-587)||(51063-51133)
chr8 (518-587)||(13153928-13153997)
chr8 (518-587)||(32675725-32675794)
chr8 (518-587)||(34490517-34490586)
chr8 (517-590)||(39029177-39029250)
chr8 (516-587)||(8948319-8948390)
chr8 (511-590)||(9035504-9035583)
chr8 (516-587)||(36177071-36177142)
chr8 (523-586)||(44580848-44580911)
chr8 (518-587)||(8251901-8251970)
chr8 (518-587)||(11798605-11798674)
chr8 (518-587)||(18455720-18455789)
chr8 (518-587)||(18754144-18754213)
chr8 (518-587)||(28579639-28579708)
chr8 (518-587)||(40741265-40741334)
chr8 (518-587)||(42885054-42885123)
chr8 (518-586)||(5162304-5162372)
chr8 (518-590)||(26016569-26016641)
chr8 (516-555)||(1774340-1774379)
chr8 (383-495)||(28883671-28883779)
chr8 (402-449)||(31599874-31599921)
chr8 (516-587)||(41014502-41014573)
chr8 (518-580)||(8951403-8951465)
chr8 (518-592)||(17856740-17856813)
chr8 (383-445)||(30525219-30525281)
chr8 (518-587)||(7758877-7758946)
chr8 (518-587)||(26625793-26625862)
chr8 (518-555)||(28572046-28572083)
chr8 (518-555)||(34568490-34568527)
chr8 (518-587)||(36408415-36408484)
chr8 (518-555)||(36786467-36786504)
chr8 (512-549)||(38183571-38183608)
chr8 (518-587)||(38878721-38878790)
chr8 (518-555)||(40784891-40784928)
chr8 (518-590)||(2152205-2152277)
chr8 (518-590)||(5784113-5784185)
chr8 (518-550)||(26990567-26990599)
chr8 (516-587)||(44502618-44502688)
chr8 (455-497)||(12704217-12704259)
chr8 (517-555)||(18641380-18641418)
chr8 (518-580)||(29598224-29598286)
chr8 (518-580)||(43654178-43654240)
chr8 (518-555)||(4631555-4631592)
chr8 (518-555)||(5593421-5593458)
chr8 (518-551)||(11798869-11798902)
chr8 (518-555)||(12802611-12802648)
chr8 (518-551)||(13154192-13154225)
chr8 (389-438)||(13532897-13532946)
chr8 (389-438)||(13622437-13622486)
chr8 (518-555)||(17069844-17069881)
chr8 (518-555)||(17578392-17578429)
chr8 (518-551)||(29279460-29279493)
chr8 (518-555)||(33980465-33980502)
chr8 (518-555)||(40529307-40529344)
chr8 (518-551)||(40530410-40530443)
chr8 (518-551)||(40741528-40741561)
chr8 (518-551)||(43653943-43653976)
chr8 (518-551)||(44250859-44250892)
chr8 (517-553)||(6050557-6050593)
chr8 (511-543)||(12255089-12255121)
chr8 (511-543)||(12260632-12260664)
chr8 (516-552)||(16998994-16999030)
[»] chr4 (82 HSPs)
chr4 (366-492)||(55240381-55240505)
chr4 (370-497)||(55240576-55240703)
chr4 (518-587)||(1859144-1859213)
chr4 (406-498)||(11784976-11785068)
chr4 (516-587)||(47806858-47806929)
chr4 (517-587)||(5743627-5743697)
chr4 (516-587)||(25708647-25708717)
chr4 (517-587)||(34273187-34273257)
chr4 (520-586)||(54676549-54676615)
chr4 (518-587)||(4035825-4035894)
chr4 (518-587)||(5375525-5375594)
chr4 (518-590)||(4415965-4416037)
chr4 (518-590)||(26625967-26626039)
chr4 (518-590)||(36391854-36391926)
chr4 (511-587)||(36990907-36990983)
chr4 (516-592)||(43387956-43388032)
chr4 (518-590)||(48030313-48030385)
chr4 (511-590)||(625932-626010)
chr4 (516-587)||(52977980-52978051)
chr4 (516-590)||(49373658-49373732)
chr4 (518-587)||(9328208-9328277)
chr4 (518-587)||(44294789-44294858)
chr4 (518-587)||(45742774-45742843)
chr4 (518-586)||(29520133-29520201)
chr4 (383-495)||(36165468-36165580)
chr4 (518-590)||(45097130-45097202)
chr4 (518-586)||(46481358-46481426)
chr4 (516-555)||(30771526-30771565)
chr4 (516-587)||(35675888-35675959)
chr4 (389-447)||(18523225-18523283)
chr4 (516-587)||(53277154-53277224)
chr4 (382-435)||(4316018-4316071)
chr4 (518-587)||(6753525-6753594)
chr4 (518-588)||(20455149-20455218)
chr4 (518-587)||(24754078-24754147)
chr4 (518-587)||(28501354-28501423)
chr4 (518-555)||(32032993-32033030)
chr4 (518-555)||(33413518-33413555)
chr4 (518-587)||(39797434-39797503)
chr4 (518-587)||(46949992-46950061)
chr4 (518-587)||(52870644-52870713)
chr4 (513-581)||(2615919-2615987)
chr4 (367-495)||(23564272-23564400)
chr4 (518-586)||(31937076-31937144)
chr4 (402-442)||(34542405-34542445)
chr4 (518-590)||(56432518-56432590)
chr4 (516-551)||(4549627-4549662)
chr4 (383-434)||(18523024-18523075)
chr4 (524-555)||(18882357-18882388)
chr4 (511-554)||(29427486-29427529)
chr4 (220-283)||(49031094-49031157)
chr4 (516-555)||(51536168-51536207)
chr4 (516-555)||(53564356-53564395)
chr4 (417-495)||(1460406-1460483)
chr4 (518-580)||(6807429-6807491)
chr4 (517-555)||(15241479-15241517)
chr4 (518-552)||(20391440-20391474)
chr4 (517-551)||(29014063-29014097)
chr4 (517-555)||(47228728-47228766)
chr4 (516-554)||(55563128-55563166)
chr4 (518-551)||(4036089-4036122)
chr4 (518-551)||(5743399-5743432)
chr4 (516-549)||(6629478-6629511)
chr4 (518-555)||(8343908-8343945)
chr4 (366-434)||(9928964-9929033)
chr4 (518-555)||(17610020-17610057)
chr4 (518-551)||(20747434-20747467)
chr4 (518-587)||(24073094-24073163)
chr4 (518-555)||(25124246-25124283)
chr4 (518-551)||(39144668-39144701)
chr4 (511-580)||(45921424-45921493)
chr4 (518-555)||(49793091-49793128)
chr4 (518-555)||(50533884-50533921)
chr4 (518-555)||(53629792-53629829)
chr4 (518-551)||(55631999-55632032)
chr4 (516-552)||(7698472-7698508)
chr4 (511-555)||(30868801-30868845)
chr4 (518-554)||(32899219-32899255)
chr4 (366-446)||(41389425-41389505)
chr4 (523-555)||(41620519-41620551)
chr4 (378-446)||(44019610-44019678)
chr4 (516-552)||(54878018-54878054)
[»] chr3 (74 HSPs)
chr3 (366-489)||(30135500-30135623)
chr3 (366-489)||(30141629-30141752)
chr3 (366-489)||(30145051-30145174)
chr3 (518-587)||(23700753-23700822)
chr3 (518-587)||(23719208-23719277)
chr3 (518-587)||(23737664-23737733)
chr3 (518-590)||(7181350-7181422)
chr3 (516-586)||(14428608-14428678)
chr3 (518-587)||(9499465-9499534)
chr3 (518-587)||(12683150-12683219)
chr3 (518-587)||(22103897-22103966)
chr3 (518-587)||(25149090-25149159)
chr3 (518-587)||(35868051-35868120)
chr3 (518-587)||(37728713-37728782)
chr3 (518-587)||(44543782-44543851)
chr3 (518-590)||(8321925-8321997)
chr3 (510-586)||(21756478-21756554)
chr3 (517-587)||(4024051-4024121)
chr3 (516-590)||(46049951-46050025)
chr3 (517-587)||(49127166-49127236)
chr3 (518-587)||(7051688-7051757)
chr3 (518-587)||(20862196-20862265)
chr3 (366-459)||(30130780-30130873)
chr3 (518-587)||(43868103-43868172)
chr3 (518-587)||(45252773-45252842)
chr3 (518-587)||(50647912-50647981)
chr3 (518-587)||(54782885-54782954)
chr3 (523-587)||(46703032-46703096)
chr3 (518-586)||(46845461-46845529)
chr3 (518-586)||(46878408-46878476)
chr3 (511-587)||(47008470-47008546)
chr3 (518-590)||(47066934-47067006)
chr3 (516-555)||(10220931-10220970)
chr3 (402-497)||(11047444-11047539)
chr3 (517-580)||(26593740-26593803)
chr3 (518-585)||(33868448-33868515)
chr3 (520-590)||(35711278-35711347)
chr3 (518-580)||(53361830-53361892)
chr3 (518-555)||(12050392-12050429)
chr3 (518-587)||(26058546-26058615)
chr3 (518-587)||(26221288-26221357)
chr3 (386-443)||(36236576-36236632)
chr3 (518-587)||(43701178-43701247)
chr3 (366-443)||(50196900-50196977)
chr3 (388-497)||(50197098-50197207)
chr3 (518-555)||(51284062-51284099)
chr3 (511-555)||(36098959-36099003)
chr3 (516-551)||(9779977-9780012)
chr3 (516-587)||(45048990-45049061)
chr3 (518-590)||(50726749-50726820)
chr3 (518-590)||(50786028-50786099)
chr3 (518-587)||(32963072-32963142)
chr3 (517-551)||(52058984-52059018)
chr3 (518-551)||(4024315-4024348)
chr3 (518-555)||(4759351-4759388)
chr3 (518-551)||(14428873-14428906)
chr3 (518-551)||(16434977-16435010)
chr3 (518-555)||(17699031-17699068)
chr3 (518-551)||(20862461-20862494)
chr3 (518-555)||(22832607-22832644)
chr3 (518-555)||(24087335-24087372)
chr3 (518-555)||(26306607-26306644)
chr3 (518-551)||(26806115-26806148)
chr3 (518-551)||(31531415-31531448)
chr3 (518-551)||(33868712-33868745)
chr3 (518-551)||(36005768-36005801)
chr3 (518-555)||(41392880-41392917)
chr3 (518-551)||(50647684-50647717)
chr3 (518-551)||(53271855-53271888)
chr3 (523-555)||(20918224-20918256)
chr3 (523-555)||(20927186-20927218)
chr3 (402-442)||(20995747-20995787)
chr3 (511-555)||(33212390-33212434)
chr3 (523-555)||(33976508-33976540)
[»] chr6 (35 HSPs)
chr6 (518-587)||(9388759-9388828)
chr6 (517-587)||(12106032-12106102)
chr6 (517-587)||(34301800-34301870)
chr6 (518-587)||(287382-287451)
chr6 (518-587)||(5457412-5457481)
chr6 (518-590)||(402586-402658)
chr6 (516-590)||(925898-925972)
chr6 (383-445)||(10742249-10742311)
chr6 (518-587)||(9038642-9038711)
chr6 (518-587)||(30248647-30248716)
chr6 (518-555)||(33487833-33487870)
chr6 (518-587)||(8743188-8743256)
chr6 (518-590)||(19097766-19097838)
chr6 (518-586)||(25045612-25045680)
chr6 (518-590)||(34915508-34915580)
chr6 (517-555)||(231105-231143)
chr6 (517-551)||(6418135-6418169)
chr6 (518-555)||(4844400-4844437)
chr6 (518-587)||(23398107-23398176)
chr6 (516-552)||(11847835-11847871)
chr6 (520-555)||(6417878-6417913)
chr6 (367-482)||(27134291-27134406)
chr6 (517-555)||(2090657-2090695)
chr6 (367-441)||(11340005-11340079)
chr6 (518-551)||(9388529-9388562)
chr6 (518-555)||(10195993-10196030)
chr6 (518-555)||(13901641-13901678)
chr6 (518-555)||(15498629-15498666)
chr6 (518-551)||(23397879-23397912)
chr6 (518-555)||(23604460-23604497)
chr6 (518-555)||(25197152-25197189)
chr6 (518-551)||(34741730-34741763)
chr6 (518-550)||(12144043-12144075)
chr6 (518-554)||(13648130-13648166)
chr6 (523-555)||(17227527-17227559)
[»] chr2 (50 HSPs)
chr2 (518-587)||(5664638-5664707)
chr2 (516-587)||(2438223-2438294)
chr2 (516-587)||(39833967-39834038)
chr2 (517-587)||(27560205-27560275)
chr2 (517-590)||(8912839-8912912)
chr2 (518-587)||(34883816-34883885)
chr2 (518-587)||(40607702-40607771)
chr2 (518-590)||(15228114-15228186)
chr2 (518-587)||(25624733-25624801)
chr2 (518-590)||(34113531-34113603)
chr2 (516-587)||(23788967-23789038)
chr2 (517-587)||(8716860-8716930)
chr2 (518-587)||(8841625-8841694)
chr2 (518-587)||(16805759-16805828)
chr2 (518-587)||(17408262-17408331)
chr2 (518-587)||(20252210-20252279)
chr2 (518-587)||(34062633-34062702)
chr2 (518-587)||(37229440-37229509)
chr2 (518-587)||(40680727-40680796)
chr2 (518-587)||(41450516-41450585)
chr2 (391-443)||(43829620-43829672)
chr2 (517-580)||(7491843-7491906)
chr2 (518-581)||(36131002-36131065)
chr2 (518-555)||(8990204-8990241)
chr2 (516-549)||(10757984-10758017)
chr2 (518-555)||(11201683-11201720)
chr2 (518-587)||(22897391-22897460)
chr2 (518-590)||(7116264-7116336)
chr2 (518-587)||(16845041-16845109)
chr2 (516-552)||(34113789-34113825)
chr2 (516-551)||(2438489-2438524)
chr2 (524-555)||(17665529-17665560)
chr2 (516-551)||(22897655-22897690)
chr2 (518-580)||(26322268-26322330)
chr2 (518-552)||(29830757-29830791)
chr2 (517-551)||(45474350-45474384)
chr2 (518-555)||(2060316-2060353)
chr2 (518-555)||(4711728-4711765)
chr2 (518-551)||(7492108-7492141)
chr2 (518-551)||(16108215-16108248)
chr2 (518-555)||(28566151-28566188)
chr2 (405-434)||(30841581-30841610)
chr2 (367-444)||(35469415-35469492)
chr2 (518-551)||(39833739-39833772)
chr2 (511-555)||(10399462-10399506)
chr2 (516-552)||(18374707-18374743)
chr2 (518-550)||(22182929-22182961)
chr2 (516-552)||(24345681-24345717)
chr2 (516-544)||(29239331-29239359)
chr2 (520-552)||(42629373-42629405)
[»] chr5 (40 HSPs)
chr5 (516-587)||(1265947-1266018)
chr5 (511-590)||(43060376-43060455)
chr5 (518-587)||(9828393-9828462)
chr5 (518-587)||(22527692-22527761)
chr5 (518-587)||(40004377-40004446)
chr5 (516-586)||(23286443-23286513)
chr5 (518-587)||(3497768-3497837)
chr5 (518-587)||(5527974-5528043)
chr5 (518-587)||(6673196-6673265)
chr5 (518-590)||(14913648-14913721)
chr5 (518-587)||(15190783-15190852)
chr5 (518-587)||(16127259-16127328)
chr5 (367-480)||(28431955-28432068)
chr5 (518-555)||(32147294-32147331)
chr5 (518-587)||(34662204-34662273)
chr5 (518-587)||(41641095-41641164)
chr5 (518-590)||(16440931-16441003)
chr5 (518-590)||(26894838-26894910)
chr5 (523-587)||(31642192-31642256)
chr5 (521-587)||(4985084-4985150)
chr5 (517-587)||(7951561-7951630)
chr5 (386-492)||(8402141-8402247)
chr5 (518-587)||(16153223-16153292)
chr5 (518-590)||(3028013-3028085)
chr5 (516-552)||(10734526-10734562)
chr5 (518-550)||(13661124-13661156)
chr5 (518-586)||(25601029-25601097)
chr5 (524-555)||(4194688-4194719)
chr5 (517-552)||(14570893-14570928)
chr5 (518-552)||(9020694-9020728)
chr5 (516-554)||(19571940-19571978)
chr5 (518-551)||(186362-186395)
chr5 (382-443)||(6423984-6424045)
chr5 (518-555)||(8949812-8949849)
chr5 (518-551)||(9828657-9828690)
chr5 (518-555)||(13862995-13863032)
chr5 (518-555)||(15521942-15521979)
chr5 (518-555)||(23260138-23260175)
chr5 (518-555)||(41384172-41384209)
chr5 (518-554)||(32964133-32964169)
[»] chr7 (48 HSPs)
chr7 (518-587)||(21295151-21295220)
chr7 (518-587)||(38858298-38858367)
chr7 (518-587)||(39871581-39871650)
chr7 (518-587)||(41252329-41252398)
chr7 (518-590)||(19920563-19920635)
chr7 (371-443)||(23972462-23972534)
chr7 (516-587)||(31457995-31458066)
chr7 (516-587)||(40300228-40300299)
chr7 (516-587)||(44510311-44510382)
chr7 (518-587)||(29286005-29286074)
chr7 (518-587)||(32814433-32814502)
chr7 (518-587)||(32872343-32872412)
chr7 (518-587)||(34979045-34979114)
chr7 (518-587)||(36646605-36646674)
chr7 (518-587)||(41026064-41026133)
chr7 (518-555)||(44547426-44547463)
chr7 (379-491)||(2911964-2912076)
chr7 (518-587)||(7449270-7449338)
chr7 (383-443)||(8745877-8745937)
chr7 (518-582)||(33858839-33858903)
chr7 (516-580)||(39197716-39197780)
chr7 (518-590)||(25950831-25950902)
chr7 (516-555)||(26255094-26255133)
chr7 (518-587)||(29177220-29177289)
chr7 (518-555)||(36698131-36698168)
chr7 (518-555)||(48521029-48521066)
chr7 (518-590)||(2289981-2290053)
chr7 (518-587)||(25247659-25247727)
chr7 (516-552)||(32759554-32759590)
chr7 (518-590)||(33381539-33381610)
chr7 (511-551)||(38428411-38428451)
chr7 (405-444)||(35035249-35035288)
chr7 (518-552)||(35888312-35888346)
chr7 (517-555)||(41003154-41003192)
chr7 (518-551)||(20075111-20075144)
chr7 (518-551)||(21295415-21295448)
chr7 (518-551)||(28060981-28061014)
chr7 (518-555)||(31803120-31803157)
chr7 (518-555)||(34012517-34012554)
chr7 (518-555)||(36711298-36711335)
chr7 (518-555)||(38736451-38736488)
chr7 (518-555)||(46148431-46148468)
chr7 (518-555)||(46415005-46415042)
chr7 (383-495)||(5473286-5473398)
chr7 (511-555)||(17878360-17878404)
chr7 (455-495)||(29155802-29155842)
chr7 (523-555)||(31769332-31769364)
chr7 (523-555)||(41787255-41787287)
[»] scaffold0604 (2 HSPs)
scaffold0604 (518-590)||(3748-3819)
scaffold0604 (511-552)||(3518-3559)
[»] scaffold0236 (1 HSPs)
scaffold0236 (384-482)||(22367-22465)
[»] scaffold0308 (1 HSPs)
scaffold0308 (518-587)||(14316-14385)
[»] scaffold0161 (1 HSPs)
scaffold0161 (516-590)||(3436-3509)
[»] scaffold0029 (1 HSPs)
scaffold0029 (518-587)||(51650-51719)
[»] scaffold0025 (2 HSPs)
scaffold0025 (518-555)||(65637-65674)
scaffold0025 (517-551)||(65377-65411)
[»] scaffold0012 (1 HSPs)
scaffold0012 (518-587)||(47640-47709)
[»] scaffold0122 (1 HSPs)
scaffold0122 (518-587)||(12065-12133)
[»] scaffold0557 (1 HSPs)
scaffold0557 (382-443)||(3924-3985)
[»] scaffold0442 (2 HSPs)
scaffold0442 (382-443)||(1547-1608)
scaffold0442 (382-443)||(7662-7723)
[»] scaffold0008 (1 HSPs)
scaffold0008 (518-555)||(259122-259159)
[»] scaffold0674 (1 HSPs)
scaffold0674 (516-555)||(5149-5188)
[»] scaffold0549 (3 HSPs)
scaffold0549 (516-555)||(10182-10221)
scaffold0549 (367-441)||(1104-1178)
scaffold0549 (367-441)||(3194-3268)
[»] scaffold0368 (1 HSPs)
scaffold0368 (516-583)||(8216-8283)
[»] scaffold0240 (1 HSPs)
scaffold0240 (516-555)||(18495-18534)
[»] scaffold0047 (1 HSPs)
scaffold0047 (518-549)||(61857-61888)
[»] scaffold0339 (1 HSPs)
scaffold0339 (517-555)||(7140-7178)
[»] scaffold0107 (1 HSPs)
scaffold0107 (517-555)||(48653-48691)
[»] scaffold0039 (1 HSPs)
scaffold0039 (517-555)||(104061-104099)
[»] scaffold0002 (1 HSPs)
scaffold0002 (518-552)||(355334-355368)


Alignment Details
Target: scaffold1432 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 51 - 519
Target Start/End: Original strand, 627 - 1085
Alignment:
Q  51 tccgactgtattaagttataaattatatcagattttt-atagtgtatcatttctttgctataattattttaacacatatttacttcaaagaaatgttcaa 149  Q
    ||||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  627 tccgagtgcattaaattataaattatatcagattttttatagtgtatcatttctttgctataattattttaacacagatttacttcaaagaaatgttcat 726  T
Q  150 atgagaatttgtttgtttgaatagcgcgtatcataaaaaatcatttttaactttggacacgacatttttaggataataaaatttaaaaacatgattaaaa 249  Q
    ||||||||| |||||||| |||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  727 atgagaattagtttgtttcaatatcg--tatcataaaaaatcatttttaactttgaacacgacatttttaggataataaaatttaaaaacatgattaaaa 824  T
Q  250 cgagaagttattttgaatagtttttaataaaaatgcaacttcaaggaggaggtgatttatggtaaatgggccgcttaaatctcttctcaaaatgcggctt 349  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||| ||||    
T  825 tgagaagttgttttgaatagtttttaataaaaatgcaacttcaaggaggaggtgatttatggta---------cttaaatctcttctcaaaatgcagctt 915  T
Q  350 gaagtggatgtgatttatgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccat 449  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  916 caagaggatgtgatttatgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacctat 1015  T
Q  450 gatcctgagcgatatgagactaacaacaaactacaaataacttcaacaatgtaatcgagcgaaaacatta 519  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1016 gatcctgagcgatatgagactaacaacaaactacaaacaacttcaacaatgtaatcgagcgaaaacatta 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 25274669 - 25274756
Alignment:
Q  19 aaaattgatcatcgaaatggttctctacgcattccgactgtattaagttataaattatatcagatttttatagtgtatcatttctttg 106  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25274669 aaaattgatcatcgaaatgattctctacgcattccaactgtattaaattataaattatatcagatttttatagtgtatcatttctttg 25274756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 35536769 - 35536846
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    ||||||||| ||||| |||||||||||||||| | ||||||| ||||||||||||  |||||||||||||||||||||    
T  35536769 atgttaaatggacttcaatctcatcccaaaagttaactcaaatgatgaggatacttgaacatatttatacattcaaca 35536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 4102751 - 4102679
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  4102751 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 4102679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 15811271 - 15811200
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  15811271 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 15811200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 49907019 - 49907090
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  49907019 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 49907090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 1039418 - 1039349
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1039349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 1046324 - 1046255
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 11741397 - 11741466
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  11741397 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 11741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 517 - 590
Target Start/End: Original strand, 16456635 - 16456708
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    ||||||||||||||||||||||||||||| || ||||||        |||||||||||||||||||||||||||    
T  16456635 ttactccctccgtccctaattataagacccttctgagaaatttttctgtccctttttataagacccctttgcta 16456708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 23541979 - 23542048
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 23542048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 36694854 - 36694923
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 36710955 - 36711024
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36711024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 37951986 - 37951917
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  37951986 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 37951917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 39497433 - 39497502
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  39497433 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 39497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 45039412 - 45039481
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  45039412 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 45039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 52431211 - 52431142
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  52431211 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 52431142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 41855510 - 41855438
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  41855510 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 41855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 52601991 - 52602063
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||||||||    
T  52601991 tactccctccgtccctaattataagacccttttaagaattttttttgtccctttttataagacccctttgcta 52602063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 586
Target Start/End: Complemental strand, 30289898 - 30289831
Alignment:
Q  519 actccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    ||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 30289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 30290263 - 30290334
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| |||||    
T  30290263 attactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacctctttg 30290334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 39363233 - 39363162
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  39363233 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 39363162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 44649627 - 44649698
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  44649627 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 44649698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 46075904 - 46075835
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaatattttttgtccctttttataagacccttttg 46075835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 7763786 - 7763714
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||| ||||||||||    
T  7763786 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttgcta 7763714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 943676 - 943637
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  943676 attactccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 25509209 - 25509280
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  25509209 tactacctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 25509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 12178099 - 12178149
Alignment:
Q  384 tctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 434  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  12178099 tctcatcccaaaagctaggtcaaaggatgagggtactcaaacatatttata 12178149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 591
Target Start/End: Original strand, 14171540 - 14171614
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgctac 591  Q
    ||||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||||||| ||||    
T  14171540 attactccctccgtctctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttactac 14171614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 21631146 - 21631072
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||||| ||||||  |        |||||||||||||||||||||||||||    
T  21631146 attactacctccgtccctaattataagacccttttgaagaaacaaattgtccctttttataagacccctttgcta 21631072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 45335884 - 45335954
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||| ||||||||||||||||| |||||||||        |||| |||||||||||||||||||    
T  45335884 ttactccctccctccctaattataagacccttttgagaattttttttgtccttttttataagacccctttg 45335954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 10645674 - 10645545
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 465  Q
    |||||||||||  ||  |||||||||||| |||  |||| ||| ||| || ||||||| |||||||||||| |||| | | |  || |||||||||| ||    
T  10645674 atgttaaataggttttgatctcatcccaacagccaactctaagtatgggggtactcaagcatatttatacactcaataccgcgggaacctgagcgatgtg 10645575  T
Q  466 agactaacaacaaactacaaataacttcaa 495  Q
     ||| |||||||||||||||| ||| ||||    
T  10645574 ggacaaacaacaaactacaaacaacctcaa 10645545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 10645829 - 10645788
Alignment:
Q  406 aaggatgaggatactcaaacatatttatacattcaacaaccc 447  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  10645829 aaggatgagggtactcaaacatatttatacactcaacaaccc 10645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 39750418 - 39750349
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||| |||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  39750418 tactccctctgtccctaattataagacccttttgagaattttttttgttcctttttataagacccctttg 39750349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 27037269 - 27037333
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccc 582  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||    
T  27037269 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccc 27037333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 31061316 - 31061253
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatat 429  Q
    ||||||||||| ||| |||||||| | ||||||| ||||||| ||||| |||||||||| ||||    
T  31061316 atgttaaataggcttgaatctcattctaaaagctaactcaaaagatgatgatactcaaatatat 31061253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Complemental strand, 39497732 - 39497697
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  39497732 attactccctccgtccctaattataagacccttttg 39497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 583
Target Start/End: Complemental strand, 42872373 - 42872306
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccc 583  Q
    |||||||||||||||||||||| ||||||| |||||| ||        ||||||||||||||||||||    
T  42872373 attactccctccgtccctaattgtaagacccttttgaaaaaaaaatttgtccctttttataagacccc 42872306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 44646269 - 44646340
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||| ||||||||||||||||||||| |||||| |         ||||||||||||||||||||||||    
T  44646269 attactccttccgtccctaattataagacccttttgaaatttttttttgtccctttttataagacccctttg 44646340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Complemental strand, 44646570 - 44646535
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  44646570 attactccctccgtccctaattataagacccttttg 44646535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Complemental strand, 44649928 - 44649893
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  44649928 attactccctccgtccctaattataagacccttttg 44649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 3142995 - 3142897
Alignment:
Q  386 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactaca 484  Q
    |||||||||||||| |||| ||| |||| | ||||| | |||||||||||||||||||   ||  | | |||||||| || ||||||||| ||||||||    
T  3142995 tcatcccaaaagctaactcgaagaatgaaggtactcgagcatatttatacattcaacagttcagaaacttgagcgatgtgggactaacaataaactaca 3142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 521 - 555
Target Start/End: Original strand, 13343776 - 13343810
Alignment:
Q  521 tccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||| |||||||||    
T  13343776 tccctccgtccctaattataagacccttttgagaa 13343810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Original strand, 38920239 - 38920273
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||| ||||||    
T  38920239 tactccctccgtccctaattataagacccttttga 38920273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 1047992 - 1048025
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  1047992 tactccctccgtccctaattataagacccttttg 1048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 7783991 - 7784028
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  7783991 tactccctccgtccctaattataatacccttttgagaa 7784028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 9202245 - 9202278
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  9202245 tactccctccgtccctaattataagacccttttg 9202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 23542276 - 23542243
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  23542276 tactccctccgtccctaattataagacccttttg 23542243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 39362934 - 39362967
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  39362934 tactccctccgtccctaattataagacccttttg 39362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 39750121 - 39750154
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  39750121 tactccctccgtccctaattataagacccttttg 39750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 42276198 - 42276161
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  42276198 tactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 43456658 - 43456621
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  43456658 tactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 50008520 - 50008483
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  50008520 tactccctccgtccctaattataagatcattttgagaa 50008483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 50937779 - 50937816
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  50937779 tactacctccgtccctaattataagaccattttgagaa 50937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 3371705 - 3371645
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||||||||||  |||||| ||||||| ||||||| ||| | |||||| ||||||    
T  3371705 atctcatcccaaaagctacctcaaaagatgagggtactcaagcatgtgtatacactcaaca 3371645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 28843244 - 28843280
Alignment:
Q  405 aaaggatgaggatactcaaacatatttatacattcaa 441  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  28843244 aaaggatgaggatattcaaaaatatttatacattcaa 28843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 36695154 - 36695118
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  36695154 attactccctctgtccctaattataagacccttttga 36695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 36711255 - 36711219
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  36711255 attactccctctgtccctaattataagacccttttga 36711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 483
Target Start/End: Original strand, 32884526 - 32884642
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 466  Q
    |||||||||| ||| ||| ||||||||||| || ||| |||||||||||||||||||||||||||| ||| |  ||| ||||||| ||||||| || |||    
T  32884526 tgttaaatagtcttgaatttcatcccaaaaactaacttaaaggatgaggatactcaaacatatttaaacacttgacatcccatgaacctgagcaatgtga 32884625  T
Q  467 gactaacaacaaactac 483  Q
    ||| || ||||||||||    
T  32884626 gacaaataacaaactac 32884642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 2944311 - 2944237
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  2944311 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 2944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 28192219 - 28192143
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  28192219 aaaatattactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 28192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 367 - 482
Target Start/End: Original strand, 32879693 - 32879808
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 466  Q
    |||||||||| ||| ||||||||||||||| || ||| ||||||||||| ||||| |||||||||| ||| |  ||| ||||||| ||||| | || |||    
T  32879693 tgttaaatagtcttgaatctcatcccaaaaactaacttaaaggatgagggtactcgaacatatttaaacacttgacatcccatgaacctgaacaatgtga 32879792  T
Q  467 gactaacaacaaacta 482  Q
    ||| || |||||||||    
T  32879793 gacaaataacaaacta 32879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 44251160 - 44251089
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  44251160 attactccctccgtccctaattataagaccattttgagaattttttttgtccctttttataagacccctttg 44251089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 51133 - 51063
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  51133 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 13153928 - 13153997
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  13153928 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 13153997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 32675794 - 32675725
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  32675794 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 32675725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 34490517 - 34490586
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||||||    
T  34490517 tactccctccgtccctaattataagatctttttgagaattttttttgtccctttttataagacccctttg 34490586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 517 - 590
Target Start/End: Original strand, 39029177 - 39029250
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    ||||||||||||||||||||||||||||| |||||||||        |||| ||||||||||||||||||||||    
T  39029177 ttactccctccgtccctaattataagacccttttgagaaaattttttgtccttttttataagacccctttgcta 39029250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 8948390 - 8948319
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  8948390 attactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 8948319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 511 - 590
Target Start/End: Complemental strand, 9035583 - 9035504
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| |||||||||||||||||||||||||||||| |||||||||        |||  ||||||||||||||||||||||    
T  9035583 aaaaaattactccctccgtccctaattataagaccattttgagaattttttttgtctttttttataagacccctttgcta 9035504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 36177142 - 36177071
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  36177142 attactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 36177071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 44580911 - 44580848
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  44580911 cctccgtccctaattataagacctttttgagaaatttttttgtccctttttataagaccccttt 44580848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 8251970 - 8251901
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  8251970 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 8251901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 11798605 - 11798674
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||| |||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  11798605 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 11798674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 18455720 - 18455789
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||||||||||    
T  18455720 tactccctccgtccctaattataagacccttttaagaattttttttgtccctttttataagacccctttg 18455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 18754144 - 18754213
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  18754144 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 18754213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 28579639 - 28579708
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  28579639 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 28579708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 40741265 - 40741334
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||| ||| |||||||||        ||||||||||||||||||||||||    
T  40741265 tactccctccgtccctaattataatacccttttgagaattttttttgtccctttttataagacccctttg 40741334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 42885054 - 42885123
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||||||||    
T  42885054 tactccctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacccctttg 42885123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Original strand, 5162304 - 5162372
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 5162372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 26016569 - 26016641
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||| ||        |||||||||||||||||| ||||||||    
T  26016569 tactccctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagaccgctttgcta 26016641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 1774340 - 1774379
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  1774340 attactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 495
Target Start/End: Original strand, 28883671 - 28883779
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 482  Q
    |||||||| ||||||||  |||  || |||||| |||||||||||||||||||| | ||||||||   | |||||||    || ||||||||||||||||    
T  28883671 atctcatctcaaaagctacctcggagaatgagggtactcaaacatatttatacacttaacaacccgaaaacctgagc----tgggactaacaacaaacta 28883766  T
Q  483 caaataacttcaa 495  Q
    |||| ||||||||    
T  28883767 caaacaacttcaa 28883779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 449
Target Start/End: Complemental strand, 31599921 - 31599874
Alignment:
Q  402 ctcaaaggatgaggatactcaaacatatttatacattcaacaacccat 449  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||    
T  31599921 ctcaaaggatgaaagtactcaaacatatttatacattcaacaacccat 31599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 41014502 - 41014573
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| ||||||||||         || |||||||||||||||||||||    
T  41014502 attactccctccgtccctaattataagatctttttgagatttttttttgttcctttttataagacccctttg 41014573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 8951465 - 8951403
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 8951403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 592
Target Start/End: Complemental strand, 17856813 - 17856740
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgctact 592  Q
    |||||||||||||||||||||||||||| |||||| ||        |||||||||||||||||||||||| ||||    
T  17856813 tactccctccgtccctaattataagacccttttga-aaaaaaaattgtccctttttataagacccctttgttact 17856740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 30525281 - 30525219
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaac 445  Q
    |||||||||||||||||  ||||||| |||||  |||||||||||||||||||| | ||||||    
T  30525281 atctcatcccaaaagctagctcaaagaatgagagtactcaaacatatttatacactaaacaac 30525219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 7758946 - 7758877
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||| ||||||    
T  7758946 tactccctccgtccctaattataagacacttttgagaatattttttgtccctttttataagactcctttg 7758877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 26625793 - 26625862
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||| |||||||||||||||||||||||||||        ||||||||||||||||| ||||||    
T  26625793 tactacctccatccctaattataagacctttttgagaaaaaaatttgtccctttttataagactcctttg 26625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 28572046 - 28572083
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  28572046 tactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 34568490 - 34568527
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34568490 tactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 36408415 - 36408484
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| |||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||    
T  36408415 tactacctccgtccctaattataagacctttttgaaaaaataatttatccctttttataagacccctttg 36408484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 36786467 - 36786504
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||||||||||||||||||||||||||||||    
T  36786467 tacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 38183608 - 38183571
Alignment:
Q  512 aaacattactccctccgtccctaattataagacctttt 549  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38183608 aaacactactccctccgtccctaattataagacctttt 38183571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 38878721 - 38878790
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||| |||||||||||||| |||||||||        |||||||||||||||||| |||||    
T  38878721 tactccctccgtctctaattataagacccttttgagaattttttttgtccctttttataagacctctttg 38878790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 40784891 - 40784928
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40784891 tactacctccgtccctaattataagacctttttgagaa 40784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 2152277 - 2152205
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||  |||||||    
T  2152277 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctatttgcta 2152205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 5784185 - 5784113
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||| |||||||||||        |||||||||||||||| || |||||||    
T  5784185 tactacctccgtccctaattataagatctttttgagaattttttttgtccctttttataagatccttttgcta 5784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 550
Target Start/End: Original strand, 26990567 - 26990599
Alignment:
Q  518 tactccctccgtccctaattataagaccttttt 550  Q
    |||||||||||||||||||||||||||||||||    
T  26990567 tactccctccgtccctaattataagaccttttt 26990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 44502618 - 44502688
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| | ||||||| |        ||||||||||||||||||||||||    
T  44502618 attactccctccgtccctaattataagatccttttgag-attttttttgtccctttttataagacccctttg 44502688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 12704259 - 12704217
Alignment:
Q  455 tgagcgatatgagactaacaacaaactacaaataacttcaaca 497  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  12704259 tgagcgatgtgggactaacaacaaactacaaacaacttcaaca 12704217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 18641418 - 18641380
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  18641418 ttactacctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 580
Target Start/End: Original strand, 29598224 - 29598286
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    ||||||||||||| |||||||||||||| |||||||||        |||||||||||||||||    
T  29598224 tactccctccgtctctaattataagacccttttgagaattttttttgtccctttttataagac 29598286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 43654240 - 43654178
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||||||||||||||||||||||||||  |||||||||        |||||||||||||||||    
T  43654240 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagac 43654178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 4631592 - 4631555
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  4631592 tactccatccgtccctaattataagaccattttgagaa 4631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 5593421 - 5593458
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  5593421 tactccttccgtccctaattataagacccttttgagaa 5593458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 11798902 - 11798869
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  11798902 tactccctccgtccctaattataagacccttttg 11798869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 12802611 - 12802648
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12802611 tactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 13154225 - 13154192
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  13154225 tactccctccgtccctaattataagacccttttg 13154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 13532897 - 13532946
Alignment:
Q  389 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacatt 438  Q
    |||||||||||  || |||||||||| | |||||||||||||||||||||    
T  13532897 tcccaaaagctagcttaaaggatgagaagactcaaacatatttatacatt 13532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 13622437 - 13622486
Alignment:
Q  389 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacatt 438  Q
    |||||||||||  || |||||||||| | |||||||||||||||||||||    
T  13622437 tcccaaaagctagcttaaaggatgagaagactcaaacatatttatacatt 13622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 29279493 - 29279460
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  29279493 tactccctccgtccctaattataagacccttttg 29279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 33980465 - 33980502
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  33980465 tactacctccgtccctaattataagacttttttgagaa 33980502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 40529307 - 40529344
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  40529307 tactccctccgtccctaattataagatccttttgagaa 40529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 40530443 - 40530410
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  40530443 tactccctccgtccctaattataagacccttttg 40530410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 40741561 - 40741528
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  40741561 tactccctccgtccctaattataagaccattttg 40741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 43653943 - 43653976
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  43653943 tactccctccgtccctaattataagacccttttg 43653976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 44250859 - 44250892
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  44250859 tactccctccgtccctaattataagacccttttg 44250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 517 - 553
Target Start/End: Complemental strand, 6050593 - 6050557
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgag 553  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  6050593 ttactacctccgtccctaattataagacccttttgag 6050557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 543
Target Start/End: Original strand, 12255089 - 12255121
Alignment:
Q  511 aaaacattactccctccgtccctaattataaga 543  Q
    |||| ||||||||||||||||||||||||||||    
T  12255089 aaaatattactccctccgtccctaattataaga 12255121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 543
Target Start/End: Original strand, 12260632 - 12260664
Alignment:
Q  511 aaaacattactccctccgtccctaattataaga 543  Q
    |||| ||||||||||||||||||||||||||||    
T  12260632 aaaatattactccctccgtccctaattataaga 12260664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 16998994 - 16999030
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  16998994 attactccctccgtccataattataagacccttttga 16999030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 366 - 492
Target Start/End: Complemental strand, 55240505 - 55240381
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 465  Q
    ||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||  |||||  |||| |||||||||    | ||||||| ||||     
T  55240505 atgttaaattggcttgaatctcatcccaaaagctaactcaaaggatgaggatactcaagtatatt--tacactcaacaacctgaaaacctgagcaatata 55240408  T
Q  466 agactaacaacaaactacaaataactt 492  Q
    | ||||||||||||||||||| |||||    
T  55240407 aaactaacaacaaactacaaacaactt 55240381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 370 - 497
Target Start/End: Complemental strand, 55240703 - 55240576
Alignment:
Q  370 taaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagac 469  Q
    |||||||| ||  |||||||||||||||||| |||||| ||||||| ||||||| |||||||||| | |||||| ||    | | ||||| ||| || ||    
T  55240703 taaatagatttggatctcatcccaaaagctcgctcaaaagatgagggtactcaagcatatttatatactcaacatcctgaaaacttgagcaatacgaaac 55240604  T
Q  470 taacaacaaactacaaataacttcaaca 497  Q
    ||||||||||||||||| ||||||||||    
T  55240603 taacaacaaactacaaacaacttcaaca 55240576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 1859144 - 1859213
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  1859144 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 1859213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 498
Target Start/End: Complemental strand, 11785068 - 11784976
Alignment:
Q  406 aaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaacaa 498  Q
    |||||||||| |||||||||||||||||||| ||||||  ||  || ||||||  || || |||||||||||||||||||| |||||||||||    
T  11785068 aaggatgagggtactcaaacatatttatacactcaacagtccgagaacctgagtaatgtgggactaacaacaaactacaaacaacttcaacaa 11784976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 47806858 - 47806929
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  47806858 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 47806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 5743697 - 5743627
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  5743697 ttactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 5743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 25708717 - 25708647
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  25708717 attactccctccgtccctaattataagacctttttgagaa-tttttttgtccctttttataagacccctttg 25708647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 34273257 - 34273187
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  34273257 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 520 - 586
Target Start/End: Original strand, 54676549 - 54676615
Alignment:
Q  520 ctccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  54676549 ctccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagaccccttt 54676615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 4035825 - 4035894
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  4035825 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 4035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 5375594 - 5375525
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 5375525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 4415965 - 4416037
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttgagaatgttttttgtccctttttataagacccctttgcta 4416037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 26626039 - 26625967
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttgcta 26625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 36391854 - 36391926
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  36391854 tactccctccgtccttaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 36391926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 511 - 587
Target Start/End: Original strand, 36990907 - 36990983
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  36990907 aaaaaattactacctccgtctctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 36990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 592
Target Start/End: Complemental strand, 43388032 - 43387956
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgctact 592  Q
    |||||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||| ||||    
T  43388032 attacttcctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacccctttgttact 43387956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 48030313 - 48030385
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||| ||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  48030313 tactccctccatccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 48030385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 511 - 590
Target Start/End: Complemental strand, 626010 - 625932
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| |||||| ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||    
T  626010 aaaaaattactacctccgtccctaattataagacctttttg-gaaaaaaaattgtccctttttataagacccctttgcta 625932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 52977980 - 52978051
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||| ||||||    
T  52977980 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagactcctttg 52978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 49373732 - 49373658
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||||| |||||||||        | |||||||||||||||||||||||||    
T  49373732 attactacctccgtccctaattataagacccttttgagaattttttttggccctttttataagacccctttgcta 49373658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 9328277 - 9328208
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 9328208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 44294789 - 44294858
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||| |||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaattttttttgtccttttttataagacccctttg 44294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 45742843 - 45742774
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  45742843 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 45742774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 29520201 - 29520133
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagaccccttt 29520133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 495
Target Start/End: Original strand, 36165468 - 36165580
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 482  Q
    |||||||||||||| ||  | |||| ||||||| ||||||||||| |||||||| ||||||||||  || ||| ||| || || |||||  |||||| ||    
T  36165468 atctcatcccaaaatctagcacaaaagatgagggtactcaaacatctttatacactcaacaacccgggaaccttagcaatgtgggactagaaacaaatta 36165567  T
Q  483 caaataacttcaa 495  Q
    |||| ||||||||    
T  36165568 caaacaacttcaa 36165580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 45097202 - 45097130
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||| |||||||||        |||||||||||||||| ||||||||||    
T  45097202 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttgcta 45097130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 46481426 - 46481358
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  46481426 tactacctccatccctaattataagacctttttgagaatttttcttgtccctttttataagaccccttt 46481358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 30771526 - 30771565
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  30771526 attactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 35675959 - 35675888
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||| ||||||    
T  35675959 attactccctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagactcctttg 35675888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 18523225 - 18523283
Alignment:
Q  389 tcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaaccc 447  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||  |||||||||||    
T  18523225 tcccaaaagatacctcaaaggatgagggtactcaaacatatttatatgttcaacaaccc 18523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 53277224 - 53277154
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||||||||||    
T  53277224 attactccctccgtccctaattataagacccttttaagaa-tttttttgtccctttttataagacccctttg 53277154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 4316018 - 4316071
Alignment:
Q  382 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatac 435  Q
    ||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||    
T  4316018 aatctcaacccaacagctaactcaaaggatgaggatattcaatcatatttatac 4316071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 6753525 - 6753594
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        |||||||||||||||||| |||||    
T  6753525 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacctctttg 6753594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 588
Target Start/End: Complemental strand, 20455218 - 20455149
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgc 588  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||    
T  20455218 tactacctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgc 20455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 24754078 - 24754147
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        |||||||||||||||||| |||||    
T  24754078 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacctctttg 24754147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 28501423 - 28501354
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  28501423 tactacctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccttttg 28501354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 39797434 - 39797503
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| |||||||||||||||||||||||||||||| ||        ||||||||||||||||||| ||||    
T  39797434 tactacctccgtccctaattataagacctttttgaaaaaatcatttgtccctttttataagacccttttg 39797503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 46949992 - 46950061
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  46949992 tactacctccgtccctaattataagacccttttgagaatattttttgttcctttttataagacccctttg 46950061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 52870644 - 52870713
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||| |||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  52870644 tactccctccgtctctaattataagacccttttgagaaatttttttgtccctttttataagatccctttg 52870713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 2615987 - 2615919
Alignment:
Q  513 aacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 581  Q
    |||| ||||||||||||||||||| |||||||| |||||||||        ||||||||||||||||||    
T  2615987 aacaatactccctccgtccctaatcataagacccttttgagaaatttttttgtccctttttataagacc 2615919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 495
Target Start/End: Original strand, 23564272 - 23564400
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 466  Q
    |||||||| |||||  ||||||||||||| ||| ||| ||| ||||| | | || ||||||| ||||||| |||||||||    | ||||||| || ||     
T  23564272 tgttaaattgacttggatctcatcccaaatgctaacttaaaagatgaaggttctaaaacatacttatacactcaacaacctgaaaacctgagcaatgtgg 23564371  T
Q  467 gactaacaacaaactacaaataacttcaa 495  Q
    ||| || ||||||||||||| ||||||||    
T  23564372 gacaaataacaaactacaaacaacttcaa 23564400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 586
Target Start/End: Original strand, 31937076 - 31937144
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctcttt 31937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 34542405 - 34542445
Alignment:
Q  402 ctcaaaggatgaggatactcaaacatatttatacattcaac 442  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  34542405 ctcaaaggatgatgatactcaaacatatttatacactcaac 34542445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 56432518 - 56432590
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        ||| ||||||||||||| |||||||||    
T  56432518 tactacctccgtccctaattataagacccttttgagaattttttttgtctctttttataagactcctttgcta 56432590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Original strand, 4549627 - 4549662
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  4549627 attactccctccgtccctaattataagacccttttg 4549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 434
Target Start/End: Original strand, 18523024 - 18523075
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 434  Q
    ||||||| |||||||||| |||||||||||| | ||||||| ||||||||||    
T  18523024 atctcataccaaaagctcgctcaaaggatgatggtactcaagcatatttata 18523075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 555
Target Start/End: Original strand, 18882357 - 18882388
Alignment:
Q  524 ctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||    
T  18882357 ctccgtccctaattataagacctttttgagaa 18882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 554
Target Start/End: Original strand, 29427486 - 29427529
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgaga 554  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||    
T  29427486 aaaacactactccctctgtccctaattataagatctttttgaga 29427529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 49031094 - 49031157
Alignment:
Q  220 ggataataaaatttaaaaacatgattaaaacgagaagttattttgaatagtttttaataaaaat 283  Q
    |||||||||||||| |||| ||| |||||   ||||| |||||||||||| |||||||||||||    
T  49031094 ggataataaaatttcaaaaaatgtttaaagttagaagctattttgaatagattttaataaaaat 49031157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 51536168 - 51536207
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  51536168 attactctctccctccctaattataagacctttttgagaa 51536207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 53564395 - 53564356
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  53564395 attactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 1460483 - 1460406
Alignment:
Q  417 tactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaa 495  Q
    |||||||||||||||||||| ||  ||||||  || ||||||| || |||||| || ||||||||||||| ||||||||    
T  1460483 tactcaaacatatttatacactcc-caacccgagaacctgagcaatgtgagacaaataacaaactacaaacaacttcaa 1460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 580
Target Start/End: Original strand, 6807429 - 6807491
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    ||||||||| |||||||||||||||||| |||||||||        |||||||||||||||||    
T  6807429 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagac 6807491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Original strand, 15241479 - 15241517
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  15241479 ttactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Complemental strand, 20391474 - 20391440
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||| ||||||    
T  20391474 tactccctccgtccctaattataagacccttttga 20391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 29014063 - 29014097
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||||||||||||||||||| |||||    
T  29014063 ttactccctccgtccctaattataagacccttttg 29014097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 47228766 - 47228728
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  47228766 ttacttcctccgtccctaattataagacccttttgagaa 47228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 55563166 - 55563128
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgaga 554  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  55563166 attactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 4036122 - 4036089
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  4036122 tactccctccgtccctaattataagacccttttg 4036089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 5743399 - 5743432
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  5743399 tactccctccgtccctaattataagaccattttg 5743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 6629511 - 6629478
Alignment:
Q  516 attactccctccgtccctaattataagacctttt 549  Q
    |||||| |||||||||||||||||||||||||||    
T  6629511 attactacctccgtccctaattataagacctttt 6629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 8343908 - 8343945
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  8343908 tactccttccgttcctaattataagacctttttgagaa 8343945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 9928964 - 9929033
Alignment:
Q  366 atgttaaatagactta-aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttata 434  Q
    ||||||||||| |||  ||||| || ||||||| |  |||||| ||||||||||||||||||||||||||    
T  9928964 atgttaaataggcttggaatcttattccaaaagttagctcaaaagatgaggatactcaaacatatttata 9929033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 17610057 - 17610020
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  17610057 tactccctccgtccctaattataagatccttttgagaa 17610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 20747467 - 20747434
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  20747467 tactccctccgtccctaattataagacccttttg 20747434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 24073163 - 24073094
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||||||| ||||||||||||||||||||||         |||||||||||||||| |||||||    
T  24073163 tactacctccgtccttaattataagacctttttgagataaaaaattgtccctttttataagatccctttg 24073094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 39144701 - 39144668
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||| ||||||||||||||||||||    
T  39144701 tactccctccgtctctaattataagacctttttg 39144668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 580
Target Start/End: Original strand, 45921424 - 45921493
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||| |||||| |||  ||||||||||||||||||||||||||||        |||||||||||||||||    
T  45921424 aaaaaattactacctttgtccctaattataagacctttttgagaattttttttgtccctttttataagac 45921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 49793091 - 49793128
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  49793091 tactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 50533884 - 50533921
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  50533884 tactccctccgtccctaattataagatcattttgagaa 50533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 53629792 - 53629829
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  53629792 tactccctccatccctaattataagacccttttgagaa 53629829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 55631999 - 55632032
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  55631999 tactccctccgtccctaattataagacccttttg 55632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 7698508 - 7698472
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  7698508 attactacctccgtccctaattataagacccttttga 7698472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 30868845 - 30868801
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||| | ||||||||||||||||||||| |||||||||    
T  30868845 aaaatattactacatccgtccctaattataagacccttttgagaa 30868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 554
Target Start/End: Complemental strand, 32899255 - 32899219
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgaga 554  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32899255 tactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 41389425 - 41389505
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacc 446  Q
    |||||||||||  || ||||| ||| |||||| |  |||||||||| |||  ||| ||| |||||||||||||||||||||    
T  41389425 atgttaaataggtttgaatctaatctcaaaaggtagctcaaaggataaggggactgaaatatatttatacattcaacaacc 41389505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 41620519 - 41620551
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  41620519 cctccgtccctaattataagacccttttgagaa 41620551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 44019610 - 44019678
Alignment:
Q  378 cttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacc 446  Q
    |||| ||||||||||||||| |  |||||||||||||| | | |||||| ||||||||||  |||||||    
T  44019610 cttagatctcatcccaaaagttagctcaaaggatgagggtgcccaaacacatttatacatcaaacaacc 44019678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 54878054 - 54878018
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  54878054 attactacctccgtccctaattataagaccgttttga 54878018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 30135500 - 30135623
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 465  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30135500 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30135599  T
Q  466 agactaacaacaaactacaaataa 489  Q
     ||| || ||||||||||||||||    
T  30135600 ggacaaataacaaactacaaataa 30135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 30141629 - 30141752
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 465  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30141629 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30141728  T
Q  466 agactaacaacaaactacaaataa 489  Q
     ||| || ||||||||||||||||    
T  30141729 ggacaaataacaaactacaaataa 30141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 30145051 - 30145174
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatg 465  Q
    ||||||||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| ||||||||||||| ||||| || | || | ||||||||||     
T  30145051 atgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttatacatccaacagcctaagaacttgagcgatata 30145150  T
Q  466 agactaacaacaaactacaaataa 489  Q
     ||| || ||||||||||||||||    
T  30145151 ggacaaataacaaactacaaataa 30145174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 23700822 - 23700753
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  23700822 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23700753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 23719277 - 23719208
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  23719277 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 23737733 - 23737664
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  23737733 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23737664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 7181350 - 7181422
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  7181350 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttgcta 7181422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 586
Target Start/End: Original strand, 14428608 - 14428678
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  14428608 attactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagaccccttt 14428678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 9499534 - 9499465
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 12683219 - 12683150
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  12683219 tactccctccgtccctaattataagaccattttgagaatttttttagtccctttttataagacccctttg 12683150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 22103966 - 22103897
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  22103966 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22103897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 25149159 - 25149090
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  25149159 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 25149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 35868120 - 35868051
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  35868120 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 35868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 37728713 - 37728782
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  37728713 tactccctccgtccctaattataagacccttttgagaatatttgttgtccctttttataagacccctttg 37728782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 44543782 - 44543851
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  44543782 tactccctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacccctttg 44543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 8321925 - 8321997
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 8321997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 510 - 586
Target Start/End: Original strand, 21756478 - 21756554
Alignment:
Q  510 gaaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||    
T  21756478 gaaaaaattactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctcttt 21756554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 4024051 - 4024121
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||    
T  4024051 ttactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 4024121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 46050025 - 46049951
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||||| |||||||||        |||| |||||||||||||| |||||||    
T  46050025 attactccctccgtccctaattataagacccttttgagaaatttttttgtccttttttataagacccttttgcta 46049951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 49127236 - 49127166
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||||    
T  49127236 ttaccccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagactcctttg 49127166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 7051757 - 7051688
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||||    
T  7051757 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 7051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 20862196 - 20862265
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  20862196 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 20862265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 459
Target Start/End: Original strand, 30130780 - 30130873
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagc 459  Q
    |||||||||||  ||  |||||||||||||| ||  |||||| ||||| ||||||||| |||||||||||| |||||| |||| || |||||||    
T  30130780 atgttaaataggtttggatctcatcccaaaaactagctcaaatgatgaagatactcaagcatatttatacactcaacagcccaagaacctgagc 30130873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 43868103 - 43868172
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| |||||    
T  43868103 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctctttg 43868172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 45252773 - 45252842
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 45252842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 50647981 - 50647912
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  50647981 tactccctccgtctctaattataagacccttttgagaaaaaattttgtccctttttataagacccctttg 50647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 54782954 - 54782885
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||| ||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  54782954 tactcccttcgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 54782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 46703032 - 46703096
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  46703032 cctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 46703096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 46845529 - 46845461
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 46845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 46878476 - 46878408
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||||    
T  46878476 tactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagaccccttt 46878408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 47008546 - 47008470
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| |||||| ||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  47008546 aaaatattactacctccgtccctaattataagacacttttgagaaatttttttgtccctttttataagacccctttg 47008470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 47066934 - 47067006
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||||||    
T  47066934 tacttcctccgtccctaattataagacccttttgagaatattttttgtccctttttataagaccactttgcta 47067006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 10220931 - 10220970
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  10220931 attactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 497
Target Start/End: Complemental strand, 11047539 - 11047444
Alignment:
Q  402 ctcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaataacttcaaca 497  Q
    |||||||||||||| ||||||| | |||||||||| |||||| | ||  | ||||||| || || |||||  ||||||||||||| ||||||||||    
T  11047539 ctcaaaggatgagggtactcaagcgtatttatacactcaacagcgcacaaacctgagcaatgtgggactagaaacaaactacaaacaacttcaaca 11047444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 580
Target Start/End: Complemental strand, 26593803 - 26593740
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    ||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  26593803 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 26593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 585
Target Start/End: Original strand, 33868448 - 33868515
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctt 585  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||    
T  33868448 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctt 33868515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 590
Target Start/End: Original strand, 35711278 - 35711347
Alignment:
Q  520 ctccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||| |||||||||        |||||||||||||||| ||||||||||    
T  35711278 ctccctccgtccctaattataagacc-ttttgagaattttttttgtccctttttataagatccctttgcta 35711347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 53361892 - 53361830
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  53361892 tactccctccgtccctaattataagaccattttgagaattttttttgtccctttttataagac 53361830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 12050429 - 12050392
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12050429 tactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 26058546 - 26058615
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  26058546 tacttcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 26058615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 26221288 - 26221357
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||| ||||    
T  26221288 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccttttg 26221357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 36236576 - 36236632
Alignment:
Q  386 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||||| | ||||||| ||||||| | |||||||||||||||||||||||||    
T  36236576 tcatcccaaaagataactcaaatgatgagg-tgctcaaacatatttatacattcaaca 36236632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 43701178 - 43701247
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||| |||||||||||||||||| |||||||||        ||||||||||||||||| ||||||    
T  43701178 tactccctctgtccctaattataagacccttttgagaattttttttgtccctttttataagactcctttg 43701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 50196977 - 50196900
Alignment:
Q  366 atgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||||  ||  ||||||||||||||| |  |||||||||||||| || | ||||||||||||||| ||||||    
T  50196977 atgttaaataggtttggatctcatcccaaaagttagctcaaaggatgagggtatttaaacatatttatacactcaaca 50196900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 50197207 - 50197098
Alignment:
Q  388 atcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaaat 487  Q
    ||||||||||||   ||||||||||||| ||||| | |||||||||||| ||||||   | ||| ||||||| || || ||| || ||||||||| |||     
T  50197207 atcccaaaagctagatcaaaggatgagggtactcgaccatatttatacactcaacagttcgtgaacctgagcaatgtgggacaaataacaaactataaac 50197108  T
Q  488 aacttcaaca 497  Q
    ||||||||||    
T  50197107 aacttcaaca 50197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 51284099 - 51284062
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  51284099 tactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 36098959 - 36099003
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||    
T  36098959 aaaatattactccatccgtccctaattataagacccttttgagaa 36099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Original strand, 9779977 - 9780012
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  9779977 attactccctccgtccctaattataagacccttttg 9780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 45049061 - 45048990
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||| |||| |||||||||||||||||||| ||        |||||||||||||||||| |||||    
T  45049061 attactccctctgtccttaattataagacctttttgaaaaaaaattttgtccctttttataagacctctttg 45048990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 50726820 - 50726749
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||| ||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  50726820 tactccctccgtccctgattataagacccttttgagaa-tttttttgttcctttttataagacccctttgcta 50726749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 50786028 - 50786099
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||| ||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  50786028 tactccctccgtccctgattataagacccttttgagaa-tttttttgttcctttttataagacccctttgcta 50786099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 32963142 - 32963072
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa-nnnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||         ||||||||||||||||||||||||    
T  32963142 tactccctccgtccctaattataagatccttttgagaatttttttttgtccctttttataagacccctttg 32963072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 52058984 - 52059018
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||||||||||||||||||| |||||    
T  52058984 ttactccctccgtccctaattataagacccttttg 52059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 4024348 - 4024315
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  4024348 tactccctccgtccctaattataagacccttttg 4024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 4759388 - 4759351
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4759388 tactacctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 14428906 - 14428873
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  14428906 tactccctccgtccctaattataagacccttttg 14428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 16434977 - 16435010
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  16434977 tactccctccgtccctaattataagacccttttg 16435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 17699068 - 17699031
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17699068 tactacctccgtccctaattataagaccattttgagaa 17699031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 20862494 - 20862461
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  20862494 tactccctccgtccctaattataagacccttttg 20862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 22832644 - 22832607
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  22832644 tactccttccgtccctaattataagacccttttgagaa 22832607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 24087372 - 24087335
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  24087372 tactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 26306644 - 26306607
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  26306644 tactccctccgttcctaattataagacccttttgagaa 26306607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 26806115 - 26806148
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  26806115 tactccctccgtccctaattataagacccttttg 26806148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 31531448 - 31531415
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  31531448 tactccctccgtccctaattataagacccttttg 31531415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 33868745 - 33868712
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  33868745 tactccctccgtccctaattataagacccttttg 33868712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 36005801 - 36005768
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  36005801 tactccctccgtccctaattataagacccttttg 36005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 41392917 - 41392880
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  41392917 tactacctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 50647684 - 50647717
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  50647684 tactccctccgtccctaattataagacccttttg 50647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 53271888 - 53271855
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||||||||||||||||| ||||||    
T  53271888 tactccctccgtccctaattataagacttttttg 53271855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 20918224 - 20918256
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  20918224 cctccgtccctaattataagacccttttgagaa 20918256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 20927186 - 20927218
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  20927186 cctccgtccctaattataagacccttttgagaa 20927218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 20995787 - 20995747
Alignment:
Q  402 ctcaaaggatgaggatactcaaacatatttatacattcaac 442  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  20995787 ctcaaaggatgagcgtagtcaaacatatttatacattcaac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 33212390 - 33212434
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||| ||||||||||||||||||||| | |||||||||    
T  33212390 aaaatattactacctccgtccctaattataagatccttttgagaa 33212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 33976508 - 33976540
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  33976508 cctccgtccctaattataagaccattttgagaa 33976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 9388828 - 9388759
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  9388828 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 9388759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 12106102 - 12106032
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  12106102 ttactctctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 12106032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 34301870 - 34301800
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  34301870 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34301800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 287451 - 287382
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||    
T  287451 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagatccctttg 287382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 5457412 - 5457481
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  5457412 tactccctccgtccctaattataagacctttttgagaattttttttgttcctttttataagacccctttg 5457481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 402658 - 402586
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  402658 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 402586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 925972 - 925898
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||| ||||||||||||||| |||||||||        |||||||||||||||| ||||||||||    
T  925972 attactccctccgttcctaattataagacccttttgagaattttttttgtccctttttataagatccctttgcta 925898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 10742311 - 10742249
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaac 445  Q
    ||||||||||||||||| | ||||| ||| ||| ||| |||||||||||||||||||||||||    
T  10742311 atctcatcccaaaagctaaatcaaatgattagggtacccaaacatatttatacattcaacaac 10742249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 9038642 - 9038711
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||||||||    
T  9038642 tactccctccgtccctaattataagacccttttgaaaaaatcatttgtccctttttataagacccctttg 9038711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 30248647 - 30248716
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  30248647 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccatttg 30248716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 33487833 - 33487870
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33487833 tactccctccgtccctaattataagacctttttgagaa 33487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 8743188 - 8743256
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttg 8743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 19097838 - 19097766
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    ||||||||||||| |||||||||||||| |||||||||        |||| ||||||||||||||||||||||    
T  19097838 tactccctccgtctctaattataagacccttttgagaattttttttgtccttttttataagacccctttgcta 19097766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 25045680 - 25045612
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 25045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 34915580 - 34915508
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||| |||||||||||    
T  34915580 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagtcccctttgcta 34915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 231143 - 231105
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  231143 ttactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 551
Target Start/End: Complemental strand, 6418169 - 6418135
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||||||||    
T  6418169 ttactccctccgtccctaattataagacctttttg 6418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 4844400 - 4844437
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  4844400 tactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 23398176 - 23398107
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| ||||||| |         |||||||||||||||||||||||    
T  23398176 tactccctccgtccctaattataagacccttttgaggattttttttatccctttttataagacccctttg 23398107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 11847871 - 11847835
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11847871 attactccctccgtccctaattataagacccttttga 11847835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 555
Target Start/End: Original strand, 6417878 - 6417913
Alignment:
Q  520 ctccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||| ||||||||||||||||||    
T  6417878 ctccctccgtccctaatcataagacctttttgagaa 6417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 27134406 - 27134291
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 466  Q
    |||||||| | |||||||   |||||||||||| | ||||  |||| |  |||||||||||||||||||| |||||||| |  ||  || ||| || |||    
T  27134406 tgttaaattggcttaaattgtatcccaaaagctgattcaatagatgtgagtactcaaacatatttatacactcaacaactcgagaatctaagcaatgtga 27134307  T
Q  467 gactaacaacaaacta 482  Q
    ||||||||||||||||    
T  27134306 gactaacaacaaacta 27134291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Original strand, 2090657 - 2090695
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  2090657 ttactacctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 11340079 - 11340005
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 441  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  11340079 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 11340005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 9388529 - 9388562
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  9388529 tactccctccgtccctaattataagacccttttg 9388562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 10196030 - 10195993
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  10196030 tactccctccgtctctaattataagacccttttgagaa 10195993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 13901641 - 13901678
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  13901641 tactacctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 15498629 - 15498666
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  15498629 tactacctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 23397879 - 23397912
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  23397879 tactccctccgtccctaattataagaccattttg 23397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 23604460 - 23604497
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23604460 tactacctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 25197152 - 25197189
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  25197152 tactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 34741763 - 34741730
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  34741763 tactccctccgtccctaattataagacccttttg 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 550
Target Start/End: Complemental strand, 12144075 - 12144043
Alignment:
Q  518 tactccctccgtccctaattataagaccttttt 550  Q
    |||||||||||||||||||||||||||| ||||    
T  12144075 tactccctccgtccctaattataagaccctttt 12144043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 554
Target Start/End: Complemental strand, 13648166 - 13648130
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgaga 554  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  13648166 tactccctccgtccttaattataagacccttttgaga 13648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Complemental strand, 17227559 - 17227527
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  17227559 cctccgtccctaattataagacccttttgagaa 17227527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 5664638 - 5664707
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  5664638 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 5664707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 2438223 - 2438294
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  2438223 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 2438294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 39834038 - 39833967
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  39834038 attactccctcagtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 39833967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 27560205 - 27560275
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  27560205 ttactccctccgtccctaattataagacccttttgagaaaaatttttgtccctttttataagacccctttg 27560275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 517 - 590
Target Start/End: Complemental strand, 8912912 - 8912839
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    ||||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  8912912 ttactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 8912839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 34883885 - 34883816
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  34883885 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34883816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 40607702 - 40607771
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  40607702 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 40607771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 15228186 - 15228114
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||| | |||||||||        |||||||||||||||||||||||||||    
T  15228186 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttgcta 15228114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 25624733 - 25624801
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  25624733 tactccctccgtccctaattataagacctttttgagaa-tttttttgtccctttttataagacccctttg 25624801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 34113531 - 34113603
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  34113531 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 34113603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 23788967 - 23789038
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  23788967 attactccctccgtccttaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 23789038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 8716930 - 8716860
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  8716930 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 8716860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 8841694 - 8841625
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  8841694 tactccctccgtccttaattataagacccttttgagaattttttttgtccctttttataagacccctttg 8841625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 16805828 - 16805759
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||||    
T  16805828 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 16805759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 17408331 - 17408262
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 17408262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 20252210 - 20252279
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||| ||||||||||||||||||||    
T  20252210 tactccctccgtccctaattataagacccttttgagaatttcttttgtcactttttataagacccctttg 20252279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 34062702 - 34062633
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  34062702 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 34062633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 37229440 - 37229509
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  37229440 tactccttccgtccctaattataagaccattttgagaatttcttttgtccctttttataagacccctttg 37229509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 40680727 - 40680796
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  40680727 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 40680796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 41450516 - 41450585
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  41450516 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 41450585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 43829620 - 43829672
Alignment:
Q  391 ccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||| ||||||    
T  43829620 ccaaaagctagctcaaagaatgaggatactcaaacatatttatacactcaaca 43829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 580
Target Start/End: Original strand, 7491843 - 7491906
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    ||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  7491843 ttactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 7491906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 581
Target Start/End: Complemental strand, 36131065 - 36131002
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacc 581  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacc 36131002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 8990204 - 8990241
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8990204 tactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 10758017 - 10757984
Alignment:
Q  516 attactccctccgtccctaattataagacctttt 549  Q
    ||||||||||||||||||||||||||||||||||    
T  10758017 attactccctccgtccctaattataagacctttt 10757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 11201683 - 11201720
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11201683 tactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 22897391 - 22897460
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        |||||||||||||| |||||||||    
T  22897391 tactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataaaacccctttg 22897460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 7116336 - 7116264
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||| || |||||||    
T  7116336 tactacctccgtccctaattataagacccttttgagaaaaaaaattgtccctttttataagatccttttgcta 7116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 16845109 - 16845041
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||||    
T  16845109 tactccctccgtccctaattataagatccttttgagaa-tttttttgtccctttttataagacccctttg 16845041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 34113825 - 34113789
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||||| ||||||    
T  34113825 attactccctccgtccctaattataagacccttttga 34113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Complemental strand, 2438524 - 2438489
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  2438524 attactccctccgtccctaattataagacccttttg 2438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 555
Target Start/End: Original strand, 17665529 - 17665560
Alignment:
Q  524 ctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||    
T  17665529 ctccgtccctaattataagacctttttgagaa 17665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 551
Target Start/End: Complemental strand, 22897690 - 22897655
Alignment:
Q  516 attactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||||| |||||    
T  22897690 attactccctccgtccctaattataagacccttttg 22897655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 26322330 - 26322268
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  26322330 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 26322268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Complemental strand, 29830791 - 29830757
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||| ||||||||||||||||||||||||||||||    
T  29830791 tactacctccgtccctaattataagacctttttga 29830757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 45474350 - 45474384
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||||||||||||||||||| |||||    
T  45474350 ttactccctccgtccctaattataagacccttttg 45474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 4711728 - 4711765
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  4711728 tactccctccgtccctaattaaaagacccttttgagaa 4711765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 7492141 - 7492108
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  7492141 tactccctccgtccctaattataagacccttttg 7492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 16108215 - 16108248
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  16108215 tactccctccgtccctaattataagacccttttg 16108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 28566151 - 28566188
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaa 28566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 434
Target Start/End: Original strand, 30841581 - 30841610
Alignment:
Q  405 aaaggatgaggatactcaaacatatttata 434  Q
    ||||||||||||||||||||||||||||||    
T  30841581 aaaggatgaggatactcaaacatatttata 30841610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 444
Target Start/End: Original strand, 35469415 - 35469492
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaa 444  Q
    ||||||| ||||||  ||||||||| |||| || ||| ||||||| |  ||| ||||||||||||||||| |||||||    
T  35469415 tgttaaaaagactttgatctcatcctaaaaactaacttaaaggataaaaatattcaaacatatttatacactcaacaa 35469492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Original strand, 39833739 - 39833772
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  39833739 tactccctccgtccctaattataagacccttttg 39833772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 10399506 - 10399462
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||| ||||| ||||||||||||||||| |||||||||    
T  10399506 aaaaaattactacctccatccctaattataagacccttttgagaa 10399462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 18374743 - 18374707
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  18374743 attactacctccgtccctaattataagacccttttga 18374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 550
Target Start/End: Complemental strand, 22182961 - 22182929
Alignment:
Q  518 tactccctccgtccctaattataagaccttttt 550  Q
    |||||||||||||||||||||||||||| ||||    
T  22182961 tactccctccgtccctaattataagaccctttt 22182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 24345717 - 24345681
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  24345717 attactacctccgtccctaattataagacccttttga 24345681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 544
Target Start/End: Original strand, 29239331 - 29239359
Alignment:
Q  516 attactccctccgtccctaattataagac 544  Q
    |||||||||||||||||||||||||||||    
T  29239331 attactccctccgtccctaattataagac 29239359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 552
Target Start/End: Original strand, 42629373 - 42629405
Alignment:
Q  520 ctccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||| ||||||    
T  42629373 ctccctccgtccctaattataagacccttttga 42629405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 1265947 - 1266018
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  1265947 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 511 - 590
Target Start/End: Complemental strand, 43060455 - 43060376
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||| |||||||    
T  43060455 aaaacattactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttgcta 43060376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 9828393 - 9828462
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 22527692 - 22527761
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  22527692 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22527761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 40004446 - 40004377
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  40004446 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 40004377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 516 - 586
Target Start/End: Complemental strand, 23286513 - 23286443
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||    
T  23286513 attactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 23286443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 3497837 - 3497768
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||| ||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  3497837 tactccctccgttcctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 3497768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 5527974 - 5528043
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||| |||||||||||||||||||||||        |||| |||||||||||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaattttttttgtccttttttataagacccctttg 5528043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 6673265 - 6673196
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| |||||    
T  6673265 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctctttg 6673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 14913648 - 14913721
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa-nnnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||    
T  14913648 tactccctccgtccctaattataagacccttttgagaatttttttttgtccctttttataagacccctttgcta 14913721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 15190852 - 15190783
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  15190852 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 15190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 16127259 - 16127328
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| |||||    
T  16127259 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacctctttg 16127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 480
Target Start/End: Original strand, 28431955 - 28432068
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatga 466  Q
    |||||||||| ||| ||| |||| |||||||||   | ||||||||||||||||||| |||||||||||| ||| || |||| || ||| ||| || |||    
T  28431955 tgttaaataggcttgaatttcattccaaaagctagtttaaaggatgaggatactcaagcatatttatacactcagcagcccaggaacctaagcaatgtga 28432054  T
Q  467 gactaacaacaaac 480  Q
    ||| || |||||||    
T  28432055 gacaaataacaaac 28432068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 32147294 - 32147331
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32147294 tactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 34662204 - 34662273
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||    
T  34662204 tactccctccgtccctaattataagacccttttgagagttttttttgtccctttttataagacccctttg 34662273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 41641095 - 41641164
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        ||||||||||||||||||||||||    
T  41641095 tactccctccgtccctaattataagatcattttgagaattttttttgtccctttttataagacccctttg 41641164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 16440931 - 16441003
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||| ||||        |||||| ||||||||||||||||||||    
T  16440931 tactccctccgtccctaattataagacccttttaagaattttttttgtccctctttataagacccctttgcta 16441003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 26894910 - 26894838
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||         |||||||||||||||||| |||||||    
T  26894910 tactccctccgtccctaattataagacccttttgagaattttttttatccctttttataagacccatttgcta 26894838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 31642192 - 31642256
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||    
T  31642192 cctccgtccctaattataagacctctttgagaaaaaaaattgtccctttttataagacccctttg 31642256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 4985150 - 4985084
Alignment:
Q  521 tccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||| |||||||||||||        ||||||||||||||||||| ||||    
T  4985150 tccctccgtccctaattataaaacctttttgagaattttttttgtccctttttataagacccttttg 4985084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 7951561 - 7951630
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||||||||||| ||||||| |        ||||||||||||||||||||||||    
T  7951561 ttactccctccgtccctaattataagacccttttgag-attttttttgtccctttttataagacccctttg 7951630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 492
Target Start/End: Original strand, 8402141 - 8402247
Alignment:
Q  386 tcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaactacaa 485  Q
    |||||||||||| |  ||||||||| |||| |||||||||||||||||||| || ||| |||   | |||||| ||| ||  | ||||||||||||||||    
T  8402141 tcatcccaaaagttagctcaaaggaggagggtactcaaacatatttatacactcgacagcccgaaaacctgagagatgtggaagtaacaacaaactacaa 8402240  T
Q  486 ataactt 492  Q
    | |||||    
T  8402241 acaactt 8402247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 16153292 - 16153223
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  16153292 tactccatccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccatttg 16153223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 3028013 - 3028085
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||| | |||||||    
T  3028013 tactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagactcatttgcta 3028085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 552
Target Start/End: Complemental strand, 10734562 - 10734526
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||||| ||||||    
T  10734562 attactccctccgtccctaattataagacccttttga 10734526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 550
Target Start/End: Complemental strand, 13661156 - 13661124
Alignment:
Q  518 tactccctccgtccctaattataagaccttttt 550  Q
    |||||||||||||||||||||||||||||||||    
T  13661156 tactccctccgtccctaattataagaccttttt 13661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 586
Target Start/End: Complemental strand, 25601097 - 25601029
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccccttt 586  Q
    |||||||||||| ||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  25601097 tactccctccgttcctaattataagacccttttgagaattttttttgttcctttttataagaccccttt 25601029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 555
Target Start/End: Original strand, 4194688 - 4194719
Alignment:
Q  524 ctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||    
T  4194688 ctccgtccctaattataagacctttttgagaa 4194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 552
Target Start/End: Complemental strand, 14570928 - 14570893
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttga 552  Q
    ||||| ||||||||||||||||||||||||||||||    
T  14570928 ttactacctccgtccctaattataagacctttttga 14570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Original strand, 9020694 - 9020728
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||| ||||||    
T  9020694 tactccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 19571978 - 19571940
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgaga 554  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  19571978 attactacctccgtccctaattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 186395 - 186362
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  186395 tactccctccgtccctaattataagacccttttg 186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Complemental strand, 6424045 - 6423984
Alignment:
Q  382 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||| |||| ||  || ||| ||||| |||||||||||||||||||||| ||||||    
T  6424045 aatctcatcctaaaaactagcttaaaagatgatgatactcaaacatatttatacactcaaca 6423984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 8949812 - 8949849
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8949812 tactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 9828690 - 9828657
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  9828690 tactccctccgtccctaattataagacccttttg 9828657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 13863032 - 13862995
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  13863032 tactccctccgtccctaattatatgacccttttgagaa 13862995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 15521979 - 15521942
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  15521979 tactccctccgtccctaattataaaacccttttgagaa 15521942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 23260175 - 23260138
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23260175 tactacctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 41384209 - 41384172
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||| | |||||||||    
T  41384209 tactccctccgtccctaattataagatccttttgagaa 41384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 518 - 554
Target Start/End: Original strand, 32964133 - 32964169
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgaga 554  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32964133 tactacctccgtccctaattataagaccattttgaga 32964169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 21295151 - 21295220
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 21295220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 38858298 - 38858367
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  38858298 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 38858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 39871650 - 39871581
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  39871650 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 39871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 41252398 - 41252329
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 41252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 19920563 - 19920635
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaattttttttgttcctttttataagacccctttgcta 19920635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 23972534 - 23972462
Alignment:
Q  371 aaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||| ||| |||||||| ||||||| | ||||||||||||||| ||||||||||||||||||  |||||||    
T  23972534 aaataggcttgaatctcattccaaaagttaactcaaaggatgagggtactcaaacatatttatatgttcaaca 23972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 31457995 - 31458066
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  31457995 attacttcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 31458066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Original strand, 40300228 - 40300299
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||    
T  40300228 attactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 40300299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 44510382 - 44510311
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||||| |||||| ||        ||||||||||||||||||||||||    
T  44510382 attactccctccgtccctaattataagaccattttgaaaaaataatttgtccctttttataagacccctttg 44510311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 29286074 - 29286005
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  29286074 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttg 29286005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 32814433 - 32814502
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  32814433 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccatttg 32814502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 32872412 - 32872343
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 32872343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 34979114 - 34979045
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  34979114 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 34979045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 36646674 - 36646605
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    ||||||||||||||||||||| |||||| |||||||||        ||||||||||||||||||||||||    
T  36646674 tactccctccgtccctaattagaagacccttttgagaattctttttgtccctttttataagacccctttg 36646605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 41026133 - 41026064
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||| ||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccatttg 41026064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 44547426 - 44547463
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44547426 tactccctccgtccctaattataagacctttttgagaa 44547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 491
Target Start/End: Original strand, 2911964 - 2912076
Alignment:
Q  379 ttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaa 478  Q
    |||||||||||||||||  || ||||||| ||||| | || ||||||||||||||||| |||| | |||| || ||||| | || || ||| || |||||    
T  2911964 ttaaatctcatcccaaaccctaactcaaatgatgaaggtattcaaacatatttatacactcaatagcccaggaacctgatccatgtgggacaaataacaa 2912063  T
Q  479 actacaaataact 491  Q
    |||||||| ||||    
T  2912064 actacaaacaact 2912076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 7449270 - 7449338
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  7449270 tactccctccgtccctaattataagaccattttgagaa-tttttttgtccctttttataagacccctttg 7449338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 8745877 - 8745937
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    ||||||||||||||| |  || ||||||||||||||||| |||||||||||||| ||||||    
T  8745877 atctcatcccaaaagttagcttaaaggatgaggatactcgaacatatttatacactcaaca 8745937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 33858903 - 33858839
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagaccc 582  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||    
T  33858903 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccc 33858839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 516 - 580
Target Start/End: Original strand, 39197716 - 39197780
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagac 580  Q
    |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  39197716 attactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagac 39197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 590
Target Start/End: Original strand, 25950831 - 25950902
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  25950831 tactacctccgtccttaattataagacctttttgagaa-tttttttgtccctttttataagacccctttgcta 25950902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 26255094 - 26255133
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  26255094 attactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 29177289 - 29177220
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||| | |||||||||        |||||||||||||||||| |||||    
T  29177289 tactccctccgtccctaattataagatccttttgagaatattttttgtccctttttataagacctctttg 29177220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 36698168 - 36698131
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  36698168 tactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 2290053 - 2289981
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||| |||||||| |||||||    
T  2290053 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttctaagacccttttgcta 2289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 25247727 - 25247659
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||  |||||||||        ||||||||||||||||||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaa-tttttttgtccctttttataagacccctttg 25247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 32759554 - 32759590
Alignment:
Q  516 attactccctccgtccctaattataagacctttttga 552  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32759554 attactacctccgtccctaattataagacctttttga 32759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 33381610 - 33381539
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||| ||||||||||||||||||||||| ||||||| |        |||||||||||||||||||||||||||    
T  33381610 tactacctccgtccctaattataagacccttttgag-attttttttgtccctttttataagacccctttgcta 33381539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 551
Target Start/End: Complemental strand, 38428451 - 38428411
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttg 551  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  38428451 aaaatattactccctccgtccctaattataagacccttttg 38428411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 444
Target Start/End: Original strand, 35035249 - 35035288
Alignment:
Q  405 aaaggatgaggatactcaaacatatttatacattcaacaa 444  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  35035249 aaaggatgaggctactcaaacatatttatacactcaacaa 35035288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Original strand, 35888312 - 35888346
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||| ||||||||||||||||||||||||||||||    
T  35888312 tactacctccgtccctaattataagacctttttga 35888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 41003192 - 41003154
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  41003192 ttactccctccgtccttaattataagacccttttgagaa 41003154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 20075144 - 20075111
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  20075144 tactccctccgtccctaattataagacccttttg 20075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 21295448 - 21295415
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||| |||||||    
T  21295448 tactccctccgtccctaattataagaactttttg 21295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 551
Target Start/End: Complemental strand, 28061014 - 28060981
Alignment:
Q  518 tactccctccgtccctaattataagacctttttg 551  Q
    |||||||||||||||||||||||||||| |||||    
T  28061014 tactccctccgtccctaattataagacccttttg 28060981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 31803157 - 31803120
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  31803157 tactacctccgtccctaattataagatctttttgagaa 31803120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 34012554 - 34012517
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34012554 tactacctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 36711335 - 36711298
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  36711335 tactccctccgttcctaattataagacccttttgagaa 36711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 38736451 - 38736488
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  38736451 tactacctccctccctaattataagacctttttgagaa 38736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 46148431 - 46148468
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  46148431 tactacctccgtccctaaatataagacctttttgagaa 46148468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 46415042 - 46415005
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  46415042 tactacctccgtccctaattataagaccattttgagaa 46415005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 495
Target Start/End: Complemental strand, 5473398 - 5473286
Alignment:
Q  383 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 482  Q
    ||||||| | ||||||| ||| ||| ||| ||| |||||| ||||||||||||||| | ||||||  || | ||||| ||||   || || |||||||||    
T  5473398 atctcattctaaaagctaacttaaaagataagggtactcatacatatttatacatttagcaacccgagaacttgagcaatatataacaaataacaaacta 5473299  T
Q  483 caaataacttcaa 495  Q
    |||| ||||||||    
T  5473298 caaacaacttcaa 5473286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 17878404 - 17878360
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttgagaa 555  Q
    |||| |||||| | |||||||||||||||||||||||||| ||||    
T  17878404 aaaatattactacttccgtccctaattataagacctttttaagaa 17878360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 495
Target Start/End: Original strand, 29155802 - 29155842
Alignment:
Q  455 tgagcgatatgagactaacaacaaactacaaataacttcaa 495  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  29155802 tgagctatatgagactaacaacaaactataaataacatcaa 29155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Complemental strand, 31769364 - 31769332
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||| |||||||||    
T  31769364 cctccgtccctaattataagacccttttgagaa 31769332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 555
Target Start/End: Original strand, 41787255 - 41787287
Alignment:
Q  523 cctccgtccctaattataagacctttttgagaa 555  Q
    ||||| |||||||||||||||||||||||||||    
T  41787255 cctccatccctaattataagacctttttgagaa 41787287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 590
Target Start/End: Complemental strand, 3819 - 3748
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 3748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 552
Target Start/End: Original strand, 3518 - 3559
Alignment:
Q  511 aaaacattactccctccgtccctaattataagacctttttga 552  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  3518 aaaaaattactccctccgtccctaattataggacccttttga 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 482
Target Start/End: Complemental strand, 22465 - 22367
Alignment:
Q  384 tctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaacaacccatgatcctgagcgatatgagactaacaacaaacta 482  Q
    |||||||||||||||| | ||||||||||| | ||||||| |||||||||||| | |||| |||  || ||| |||||| || ||||| ||||||||||    
T  22465 tctcatcccaaaagctaattcaaaggatgaaggtactcaagcatatttatacactgaacatcccgggaacctaagcgatgtgggactagcaacaaacta 22367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 14385 - 14316
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  14385 tactccctccgtccttaattataagacccttttgagaattttttctgtccctttttataagacccctttg 14316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 590
Target Start/End: Original strand, 3436 - 3509
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttgcta 590  Q
    |||||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  3436 attactacctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Complemental strand, 51719 - 51650
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        |||||||||||||||| |||||||    
T  51719 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttg 51650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 65674 - 65637
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||||||||||||||||||||||||||||||||||||    
T  65674 tactccctccgtccctaattataagacctttttgagaa 65637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 65377 - 65411
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttg 551  Q
    ||||||||||||||||||||||||||||| |||||    
T  65377 ttactccctccgtccctaattataagacccttttg 65411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 47640 - 47709
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||| ||||||    
T  47640 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagactcctttg 47709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 587
Target Start/End: Original strand, 12065 - 12133
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccctttg 587  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  12065 tactccctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttg 12133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 3924 - 3985
Alignment:
Q  382 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  3924 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 1547 - 1608
Alignment:
Q  382 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  1547 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 7662 - 7723
Alignment:
Q  382 aatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaaca 443  Q
    |||||||||  ||||| | ||| ||||||||||| ||||||||||||||| |||||||||||    
T  7662 aatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaaca 7723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 259159 - 259122
Alignment:
Q  518 tactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||||||||||||||||||||||||| |||||||||    
T  259159 tactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 5149 - 5188
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  5149 attactacctccgtccctaattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Complemental strand, 10221 - 10182
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  10221 attactacctccgtccctaattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 1178 - 1104
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 441  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  1178 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 3268 - 3194
Alignment:
Q  367 tgttaaatagacttaaatctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 441  Q
    ||||||||||| ||| |||| |||| |||| ||  ||||||||||  ||||||||| ||||||||||||| ||||    
T  3268 tgttaaatagagttagatctgatcctaaaaactagctcaaaggatatggatactcagacatatttatacactcaa 3194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 583
Target Start/End: Original strand, 8216 - 8283
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaannnnnnnngtccctttttataagacccc 583  Q
    |||||||||||||||||||||| ||||||| |||||| ||        ||||||||||||||||||||    
T  8216 attactccctccgtccctaattgtaagacccttttgaaaaaaaaatttgtccctttttataagacccc 8283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 18495 - 18534
Alignment:
Q  516 attactccctccgtccctaattataagacctttttgagaa 555  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  18495 attactacctccgtccctaattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 549
Target Start/End: Complemental strand, 61888 - 61857
Alignment:
Q  518 tactccctccgtccctaattataagacctttt 549  Q
    ||||||||||||||||||||||||||||||||    
T  61888 tactccctccgtccctaattataagacctttt 61857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 7178 - 7140
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  7178 ttacttcctccgtccctaattataagacccttttgagaa 7140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Original strand, 48653 - 48691
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  48653 ttactacctccgtccctaattataagacccttttgagaa 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 555
Target Start/End: Complemental strand, 104099 - 104061
Alignment:
Q  517 ttactccctccgtccctaattataagacctttttgagaa 555  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  104099 ttactacctccgtccctaattataagatctttttgagaa 104061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Complemental strand, 355368 - 355334
Alignment:
Q  518 tactccctccgtccctaattataagacctttttga 552  Q
    |||||||||||||||||||||||||||| ||||||    
T  355368 tactccctccgtccctaattataagacccttttga 355334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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