View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21648_low_7 (Length: 495)

Name: NF21648_low_7
Description: NF21648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21648_low_7
NF21648_low_7
[»] chr1 (24 HSPs)
chr1 (17-386)||(46135587-46135957)
chr1 (103-310)||(3448959-3449166)
chr1 (381-480)||(46135986-46136085)
chr1 (141-369)||(3447241-3447461)
chr1 (103-280)||(11670949-11671126)
chr1 (103-283)||(12180812-12180993)
chr1 (103-224)||(29292619-29292740)
chr1 (103-224)||(29263469-29263591)
chr1 (17-101)||(52766790-52766874)
chr1 (385-480)||(46132796-46132891)
chr1 (103-226)||(21087685-21087805)
chr1 (106-310)||(4033096-4033289)
chr1 (103-222)||(20771093-20771209)
chr1 (103-191)||(11672557-11672645)
chr1 (103-283)||(12181095-12181275)
chr1 (221-359)||(12181482-12181613)
chr1 (103-250)||(13993671-13993818)
chr1 (103-190)||(35238903-35238990)
chr1 (103-182)||(36814109-36814188)
chr1 (103-182)||(36817254-36817333)
chr1 (231-300)||(13995591-13995659)
chr1 (231-300)||(14003705-14003773)
chr1 (103-198)||(12181382-12181477)
chr1 (102-198)||(10162848-10162943)
[»] chr5 (4 HSPs)
chr5 (103-311)||(6454360-6454568)
chr5 (102-310)||(13858191-13858403)
chr5 (102-280)||(11664661-11664845)
chr5 (103-268)||(13860044-13860213)
[»] chr8 (8 HSPs)
chr8 (103-306)||(7305493-7305694)
chr8 (103-305)||(7302960-7303161)
chr8 (103-265)||(13014719-13014881)
chr8 (102-196)||(38064352-38064446)
chr8 (103-177)||(39544793-39544867)
chr8 (103-182)||(26228583-26228662)
chr8 (103-197)||(13013459-13013553)
chr8 (141-287)||(11361844-11361991)
[»] chr4 (10 HSPs)
chr4 (103-310)||(36761721-36761929)
chr4 (103-310)||(40603846-40604054)
chr4 (106-310)||(4897424-4897626)
chr4 (103-280)||(22497860-22498037)
chr4 (156-307)||(49408660-49408811)
chr4 (103-280)||(42430749-42430930)
chr4 (103-258)||(49058242-49058393)
chr4 (109-214)||(3071628-3071733)
chr4 (144-287)||(38705567-38705709)
chr4 (325-380)||(42430673-42430728)
[»] chr2 (5 HSPs)
chr2 (116-359)||(35549709-35549944)
chr2 (114-310)||(5813420-5813615)
chr2 (234-310)||(14389696-14389772)
chr2 (149-306)||(5816314-5816472)
chr2 (103-189)||(14389768-14389854)
[»] chr6 (3 HSPs)
chr6 (103-298)||(1520396-1520591)
chr6 (226-276)||(35026715-35026765)
chr6 (103-194)||(35026140-35026232)
[»] chr3 (7 HSPs)
chr3 (103-310)||(49089475-49089682)
chr3 (173-310)||(34618918-34619055)
chr3 (143-310)||(52655442-52655609)
chr3 (103-298)||(3964621-3964816)
chr3 (103-156)||(34618856-34618909)
chr3 (231-311)||(3956873-3956954)
chr3 (264-310)||(49095273-49095319)
[»] chr7 (8 HSPs)
chr7 (103-309)||(41397674-41397885)
chr7 (102-310)||(22130479-22130687)
chr7 (102-310)||(40500419-40500627)
chr7 (103-307)||(48572684-48572889)
chr7 (194-305)||(26198901-26199012)
chr7 (103-214)||(30879434-30879544)
chr7 (103-224)||(22112209-22112330)
chr7 (103-224)||(40494121-40494242)


Alignment Details
Target: chr1 (Bit Score: 335; Significance: 0; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 17 - 386
Target Start/End: Original strand, 46135587 - 46135957
Alignment:
Q  17 agaagggttttagtgtgaggataagtaccccaagctctctcccttcacaacaactccacttcatcaaatgtcaacccttaggtttaaacaaccgacatcg 116  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46135587 agaagggttttaatgtgaggataagtaccctaagctctctcccttcacaacaactccacttcatcaaatgtcaacccttaggtttaaacaatcgacatcg 46135686  T
Q  117 aattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgact 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46135687 aattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacaacatgaactatgact 46135786  T
Q  217 cttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatacagatac 316  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46135787 cttcatttgcataccacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatacagatac 46135886  T
Q  317 gaggcatgaaaaactcgggggcttgaagccc-ttgctttagtggcaacccccttagacaggccctaaaaaa 386  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  46135887 gaggcctgaaaaactcgggggcttgaagccctttgctttagtggcaacccccttagacaggccctgaaaaa 46135957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 3448959 - 3449166
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| || |||||  ||||||| ||||  ||| ||||||| ||||||||||||||||||| |||||||||  ||| ||||| ||||||||| ||     
T  3448959 aacaaccgatattgaattacattgataggaatctgaaggcaaaaataatttaaggttcaaataactaataaaatagttagcattgagatcgaacttgcaa 3449058  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgagg 302  Q
    |||||||||||||||||||||| |||| ||||||| ||| |||||||| | ||| | |||||| ||||||||||||||||||||| |||||||||||||     
T  3449059 catgaactatgactcttcatttacataccacttgagctttgagtgaacatatttgcaaaatttaacgtacgaaaatattttcaaacataaaaatatgaga 3449158  T
Q  303 cctaatac 310  Q
    ||||||||    
T  3449159 cctaatac 3449166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 46136085 - 46135986
Alignment:
Q  381 aaaaaactaactaacctataaaccataacttgtatttcggacttaacaagtctccccagtatatgtatagtcggatactcaagattcttccagttgtaga 480  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46136085 aaaaaactaactaacctataaaccataacttgtattttggacttaacaagtctccccagtatatgtatagtcggatactcaagattcttccggttgtaga 46135986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 141 - 369
Target Start/End: Original strand, 3447241 - 3447461
Alignment:
Q  141 gcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaact 240  Q
    ||||||| |||||||||| |||||||||||||||||| |||  ||||||||||||||| || ||||||||| |||||||||||| |||| ||||||| ||    
T  3447241 gcaaaaataatttaaggtacaaataaccaataaaatagctatcattgaaatcgaacttgcaacatgaactaagactcttcatttacataccacttgagct 3447340  T
Q  241 tcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatacagatacgaggcatgaaaaactcgggggctt 340  Q
    | |||||||| ||||||  ||||||||||||| |||||||||| ||||  | ||||||||| |      || ||| | ||| |||||||||||||||| |    
T  3447341 ttgagtgaacatgtttataaaatttgacgtacaaaaatatttttaaag--acaaatatgagac------caaatatggggcttgaaaaactcgggggcct 3447432  T
Q  341 gaagcccttgctttagtggcaaccccctt 369  Q
     |||||||||||||||||||| |||||||    
T  3447433 aaagcccttgctttagtggcatccccctt 3447461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 103 - 280
Target Start/End: Original strand, 11670949 - 11671126
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||||| | ||||  |||||||| |||  ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||| |      
T  11670949 aacaaccgacaacaaattacattgataaaaatctgaaggcaaaaagaattcaaggttcaaataaccaataaaatagttagcattgaaatcgaacttgcta 11671048  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatat 280  Q
    ||||||| ||||||| |||||| |||| ||||||| ||||| |||||  |||| || |||||||||||||||||||||    
T  11671049 catgaaccatgactcctcatttacataccacttgagcttcgggtgaatatgttaacaaaatttgacgtacgaaaatat 11671126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 103 - 283
Target Start/End: Original strand, 12180812 - 12180993
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaa-agaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttaca 201  Q
    |||||||||||||||||| |||||||| |||| | || |||||| |||||||||||||||||||| |||||||||  |||  |||||||| |||||| ||    
T  12180812 aacaaccgacatcgaattagattgataggaatccaaaggcaaaaaagaatttaaggttcaaataaacaataaaatggctaacattgaaattgaacttgca 12180911  T
Q  202 gcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatatttt 283  Q
      |||||||||||||| ||||||||||| ||||||| |||||||| ||| | ||||  |||||||||  || ||||||||||    
T  12180912 aaatgaactatgactcctcatttgcataccacttgagcttcgagtaaacatttttaaaaaatttgacaaacaaaaatatttt 12180993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 29292740 - 29292619
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||| || |||||||||||||  |||  ||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  29292740 aacaaccgacgtctaattcgattgatagaaatcagaaggtaaaaagaatttaaggttcaaataaccaataaaatacctaacattgaaatcgaacttacaa 29292641  T
Q  203 catgaactatgactcttcattt 224  Q
    |||||||||| |||||||||||    
T  29292640 catgaactataactcttcattt 29292619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 29263591 - 29263469
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaa-agcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttaca 201  Q
    |||||||||| || |||||||||||||  |||  |||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  29263591 aacaaccgacgtctaattcgattgatagaaatcagaagggcaaaaagaatttaaggttcaaataaccaataaaatacctaacattgaaatcgaacttaca 29263492  T
Q  202 gcatgaactatgactcttcattt 224  Q
     |||||||||| | |||||||||    
T  29263491 acatgaactataattcttcattt 29263469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 52766790 - 52766874
Alignment:
Q  17 agaagggttttagtgtgaggataagtaccccaagctctctcccttcacaacaactccacttcatcaaatgtcaacccttaggttt 101  Q
    ||||||||||||||| ||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  52766790 agaagggttttagtgcgaggattcttaccccaagctctctccctccacaacaactccacttcatcaaatgtcaaccctttggttt 52766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 385 - 480
Target Start/End: Complemental strand, 46132891 - 46132796
Alignment:
Q  385 aactaactaacctataaaccataacttgtatttcggacttaacaagtctccccagtatatgtatagtcggatactcaagattcttccagttgtaga 480  Q
    |||||||||||||||| ||||||||| ||||  ||||| |||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||    
T  46132891 aactaactaacctatacaccataactcgtatcccggacctaacaagtctccccagtagagatatagtcggatcctcaagattcttccagttgtaga 46132796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 21087805 - 21087685
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| |||||||| |||||||| ||||   || ||||||||||||||||  | ||||||||||||||||| |||| |||||||||||||   ||     
T  21087805 aacaaccgaaatcgaattagattgataggaatctaaaggcaaaaagaatttaagtattaaataaccaataaaatagctagcattgaaatcgaac---caa 21087709  T
Q  203 catgaactatgactcttcatttgc 226  Q
    ||||||||||||||||||||||||    
T  21087708 catgaactatgactcttcatttgc 21087685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 310
Target Start/End: Original strand, 4033096 - 4033289
Alignment:
Q  106 aaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcat 205  Q
    |||||||||||||||  ||||||| ||||  ||| ||||||||||||||||||||||||| |            | | |||||||| |||||| || |||    
T  4033096 aaccgacatcgaattaaattgatatgaatctgaaggcaaaaagaatttaaggttcaaatagc------------tggcattgaaatagaacttgcaacat 4033183  T
Q  206 gaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatatttt-caaagataaaaatatgaggcc 304  Q
    || ||| ||||| || ||| |||| ||||| | ||| || ||||| ||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  4033184 gacctacgactcctcgtttacataccacttaagctttgaatgaacatgtttacaaaatttgacgtgcgaaaatattttccaaagacaaaaatatgaggcc 4033283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 20771209 - 20771093
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| |||||||| |||||||| ||||   || ||||||||||||||||  | ||||||||||||| ||| |||| |||||||||||||   ||     
T  20771209 aacaaccgaaatcgaattagattgataggaatctaaaggcaaaaagaatttaagtattaaataaccaataagatagctagcattgaaatcgaac---caa 20771113  T
Q  203 catgaactatgactcttcat 222  Q
    ||||||||||||||||||||    
T  20771112 catgaactatgactcttcat 20771093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 11672557 - 11672645
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaat 191  Q
    |||||||||||||||||| |||||||   |||  ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||    
T  11672557 aacaaccgacatcgaattagattgatcgaaatctgaaggcaaaaagaattcaaggttcaaataaccaataaaatagttagcattgaaat 11672645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 283
Target Start/End: Original strand, 12181095 - 12181275
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||| ||| ||| |||| |||||| | ||||  ||| |||| | |||||||| |||||||| ||||||||||||  ||| |||||||| ||||||  |     
T  12181095 aacaatcgaaatcaaattagattgacaggaatctgaaggcaacatgaatttaatgttcaaatcaccaataaaatagttagcattgaaattgaacttgtaa 12181194  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatatttt 283  Q
     || ||||||||||| ||||||||||| ||||||| |||  ||| | | |||| |  ||||||||||||| ||||||||||    
T  12181195 aataaactatgactcctcatttgcataccacttgagctttaagtaagcatgttgaaaaaatttgacgtacaaaaatatttt 12181275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 359
Target Start/End: Original strand, 12181482 - 12181613
Alignment:
Q  221 atttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatacagatacgagg 320  Q
    ||||||||| ||||||| || | ||||||  ||||||| |||||  ||||||||||||||||||||||| ||||||| ||||||||      |||||||     
T  12181482 atttgcataccacttgagctccaagtgaatatgtttac-aaattgaacgtacgaaaatattttcaaagacaaaaatacgaggccta------atacgaga 12181574  T
Q  321 catgaaaaactcgggggcttgaagcccttgctttagtgg 359  Q
    | | |||||||||||||| | ||||||||| ||||||||    
T  12181575 cctaaaaaactcgggggcctaaagcccttgatttagtgg 12181613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 13993671 - 13993818
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||||||| |||| |||| |||  |||| ||| |||||||||||||||| | |||||||||||||||||  |||| ||  ||||| ||||| ||     
T  13993671 aacaaccgacatcaaattagatttatagaaatttgaaggcaaaaagaatttaagatccaaataaccaataaaatggctagcatataaatcaaacttccat 13993770  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaac 250  Q
    |||||||  | |||||| ||||  ||| ||||||||||| | ||||||    
T  13993771 catgaaccgtaactctttatttaaataccacttgaactttgggtgaac 13993818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 35238903 - 35238990
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaa 190  Q
    |||||||||| || ||||||||||||| ||||  |||  |||||| ||||||||||||||||||  |||||||||||||| |||||||    
T  35238903 aacaaccgacgtcaaattcgattgataggaatcagaagacaaaaaaaatttaaggttcaaataattaataaaatacctagcattgaaa 35238990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 36814188 - 36814109
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctag 182  Q
    |||||||||||| ||||| |||| ||| ||||  ||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  36814188 aacaaccgacattgaattagattaataggaatctgaaggcaaaaagaatttaaagttcaaataaccaataaaatagctag 36814109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 36817333 - 36817254
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctag 182  Q
    |||||||||||| ||||| |||| ||| ||||| ||| |||||||||| |||| ||||||||||||||||||||| ||||    
T  36817333 aacaaccgacattgaattagattaataggaatttgaatgcaaaaagaaattaatgttcaaataaccaataaaatagctag 36817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 13995659 - 13995591
Alignment:
Q  231 cacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatga 300  Q
    |||||||  ||||||||||| ||||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  13995659 cacttgagattcgagtgaacatgtttat-aaatttgacgtactaaaatattttcaaaaataaaaatatga 13995591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 14003773 - 14003705
Alignment:
Q  231 cacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatga 300  Q
    |||||||  ||||||||||| ||||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  14003773 cacttgagattcgagtgaacatgtttat-aaatttgacgtactaaaatattttcaaaaataaaaatatga 14003705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 12181382 - 12181477
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    ||||||| | || ||||| ||| |||| ||||  ||| |||| ||||||||||||||||||||| ||||||||||  ||| | || ||||||||||    
T  12181382 aacaaccaaaattgaattagatcgatacgaatctgaaggcaacaagaatttaaggttcaaataatcaataaaatagttagcactgtaatcgaactt 12181477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 10162943 - 10162848
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    |||||||| ||||| |||| ||||||||  |||  ||| | |||||||| |||||| | ||||||||||| ||||| |||| |||||||| ||||||    
T  10162943 aaacaaccaacatcaaattagattgatagaaatatgaaggtaaaaagaagttaaggatgaaataaccaat-aaatagctagcattgaaatagaactt 10162848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 4e-76; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 103 - 311
Target Start/End: Original strand, 6454360 - 6454568
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||| |||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  6454360 aacaaccgacctcgaattcgattgataggaatctgaaggcaaaaagaatttaaggttcaaataaccaataaaattcctagcattgaaatcgaacttacaa 6454459  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgagg 302  Q
     |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||    
T  6454460 tatgaactatgactcttcatttgcataccacttgaacttcgagtgaacatgtttacaaaatttgatgtacggaaatattttcaaacataaaaatatgagg 6454559  T
Q  303 cctaataca 311  Q
     ||||||||    
T  6454560 tctaataca 6454568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 102 - 310
Target Start/End: Original strand, 13858191 - 13858403
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaag----gttcaaataaccaataaaatacctagtattgaaatcgaact 197  Q
    ||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||    ||||||||||| | ||||||| |||| ||||||||||||||    
T  13858191 aaacaaccgacatcgaattagattgataggaatctgaaggcaaaaagaatttaagtatggttcaaataactagtaaaatagctagcattgaaatcgaact 13858290  T
Q  198 tacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaata 297  Q
    | || |||||| |||||||| |||||| |||| ||||||| |||||||||||| ||||||| ||||||||||| | |||||||||||||| | |||||||    
T  13858291 tgcaacatgaattatgactcatcatttacataccacttgagcttcgagtgaacatgtttacaaaatttgacgttcaaaaatattttcaaaaacaaaaata 13858390  T
Q  298 tgaggcctaatac 310  Q
    |||||||||||||    
T  13858391 tgaggcctaatac 13858403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 11664661 - 11664845
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaa------atcgaa 195  Q
    ||||||||||||||||||| ||||||||  |||  ||| |||||| ||||| ||||||||||||||||||||||||  ||| ||||||      ||| ||    
T  11664661 aaacaaccgacatcgaattagattgatagaaatctgaaggcaaaaggaattcaaggttcaaataaccaataaaatagttagcattgaactcaaaatcaaa 11664760  T
Q  196 cttacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatat 280  Q
    ||| |  |||||||||||||||||||||| |||| ||||||| |||||||| ||| ||||||  |||||||||||||||||||||    
T  11664761 cttgctacatgaactatgactcttcatttacataccacttgagcttcgagttaacatgtttataaaatttgacgtacgaaaatat 11664845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 103 - 268
Target Start/End: Complemental strand, 13860213 - 13860044
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaag----gttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    |||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||    ||||||||||| ||||||||| |||  | |||||||||||||    
T  13860213 aacaaccgacatcgaattagattgataggaatctgaaggcaaaaagaatttaagtatggttcaaataactaataaaatagctaacactgaaatcgaactt 13860114  T
Q  199 acagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgac 268  Q
      | |||||| |||||||| |||||| |||| ||||||| |||| | ||||| ||||||| |||||||||    
T  13860113 gaaacatgaattatgactcctcatttacataccacttgagcttcaaatgaacatgtttacaaaatttgac 13860044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 9e-62; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 7305493 - 7305694
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| ||||||||||||||||| ||||  |||  ||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||     
T  7305493 aacaaccgatatcgaattcgattgataggaatctgaagacaaaaggaatttaaggttcaaataaccaataaaatatctagcattgaaatcaaacttacaa 7305592  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgagg 302  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||| |||  |||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  7305593 catgaactatgactcttcatttgtataccacttaaacttcgagagaa--tgtttacgaattttgacgtatgaaaatattttcaaaaataaaaatatgagg 7305690  T
Q  303 ccta 306  Q
    ||||    
T  7305691 ccta 7305694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 103 - 305
Target Start/End: Original strand, 7302960 - 7303161
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||| ||||||||||||||||||||| ||||  |||   ||||||||||||| ||| |||||| |||||||||||  |  ||||||||| ||||||||     
T  7302960 aacaatcgacatcgaattcgattgataggaatctgaagataaaaagaatttaaagtttaaataatcaataaaatactcaacattgaaatcaaacttacaa 7303059  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgagg 302  Q
    |||||||||||| | ||||| | |||| ||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7303060 catgaactatgatttttcatctacataccacttaaacttcgagagaacatgtttacgaaatttgacgta-gaaaatattttcaaagataaaaatatgagg 7303158  T
Q  303 cct 305  Q
    |||    
T  7303159 cct 7303161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 103 - 265
Target Start/End: Original strand, 13014719 - 13014881
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||| | |||||||| ||||| |||||||  |||||||||||||||| ||||||||||||| || ||||||| |||| ||||||||| ||||| ||     
T  13014719 aacaaccaaaatcgaattagattgttaagaatctgaaagcaaaaagaattcaaggttcaaataatcattaaaatagctagcattgaaatcaaacttgcaa 13014818  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaattt 265  Q
    ||||||| |||| || | |||| |||||||||||| |||||||||||| ||||| | ||||||    
T  13014819 catgaacgatgattcctaatttacatatcacttgagcttcgagtgaacatgttttcaaaattt 13014881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 38064352 - 38064446
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaac 196  Q
    ||||||||||||||||||| |||| ||| ||||  |||||||||||||| |||||||| ||||||||||||||||   ||| |||||||||||||    
T  38064352 aaacaaccgacatcgaattagattaataggaatatgaaagcaaaaagaagttaaggttaaaataaccaataaaattgttagcattgaaatcgaac 38064446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 39544867 - 39544793
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaata 177  Q
    ||||||||||||| |||| |||||||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  39544867 aacaaccgacatcaaattagattgataagaatctgaaggtaaaaagaatttaaggttcaaataaccaataaaata 39544793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 26228662 - 26228583
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctag 182  Q
    ||||||| |||||||||| |||||||||||||| ||| |||||| |||||||| || |||||||| |||| |||| ||||    
T  26228662 aacaaccaacatcgaattagattgataagaatttgaaggcaaaacgaatttaatgtccaaataacaaatagaatagctag 26228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 13013459 - 13013553
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaact 197  Q
    ||||||||||||| ||||  ||||||| ||||  |||   ||||||||||||||||||||||||| ||||||||  |||| ||||||||| ||||    
T  13013459 aacaaccgacatcaaattaaattgataggaatctgaagataaaaagaatttaaggttcaaataacgaataaaattactagcattgaaatcaaact 13013553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 11361844 - 11361991
Alignment:
Q  141 gcaaaaagaatttaag-gttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaac 239  Q
    |||||||||||||||  ||||||||||| ||||||| |  ||| ||||||||||||| | || |||||||||  | |  || ||| |||| |||||||||    
T  11361844 gcaaaaagaatttaaaagttcaaataactaataaaacagatagcattgaaatcgaacatgcaacatgaactacaatttctcgtttacataccacttgaac 11361943  T
Q  240 ttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaa 287  Q
    || |||| |||   ||||| ||||||||| ||  ||||||||||||||    
T  11361944 tttgagtaaacacttttacaaaatttgacatagaaaaatattttcaaa 11361991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 103 - 310
Target Start/End: Complemental strand, 36761929 - 36761721
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| ||||||||||||||||| ||||  ||| |||||||||||||||  |||||||||||||||||||| |||| ||||||||| ||||||||     
T  36761929 aacaaccgatatcgaattcgattgataggaatctgaacgcaaaaagaatttaaatttcaaataaccaataaaatagctagcattgaaatcaaacttacaa 36761830  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacg-aaaatattttcaaagataaaaatatgag 301  Q
    |||||   ||||||| ||||||||||| || ||||||||||| |||||  |||||| |||||||||||||| |||||||||||||||| ||||||| |||    
T  36761829 catgagtaatgactcctcatttgcataccatttgaacttcgaatgaacaagtttacaaaatttgacgtacgaaaaatattttcaaagacaaaaatacgag 36761730  T
Q  302 gcctaatac 310  Q
    | |||||||    
T  36761729 gtctaatac 36761721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 103 - 310
Target Start/End: Complemental strand, 40604054 - 40603846
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||||||||||||| |||||||||||||||||||||  || ||||| |||||||||     
T  40604054 aacaaccgacatcgaaatcgattgatagtaatttgaagataaaaagaatttaaggtttaaataaccaataaaatacctaacatcgaaatggaacttacaa 40603955  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtac-gaaaatattttcaaagataaaaatatgag 301  Q
    ||| |||||||| |||||||  |||||||||||||||||||||||||| | ||||  |||||| ||||||  |||||||||||| |||| ||||||||||    
T  40603954 cataaactatgattcttcatcagcatatcacttgaacttcgagtgaacatatttataaaatttaacgtacaaaaaatattttcatagattaaaatatgag 40603855  T
Q  302 gcctaatac 310  Q
    |||||||||    
T  40603854 gcctaatac 40603846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 106 - 310
Target Start/End: Complemental strand, 4897626 - 4897424
Alignment:
Q  106 aaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcat 205  Q
    ||||||||||||||| |||||||| ||||| ||| ||||| | |||||||| ||||||||||| |||||||| || | | | ||||||||||| ||  ||    
T  4897626 aaccgacatcgaattagattgatatgaatttgaaggcaaacaaaatttaagattcaaataacctataaaatagctcgcactaaaatcgaacttgca--at 4897529  T
Q  206 gaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcct 305  Q
    ||  |||||||| |  ||| |||| |||||||| ||||| ||||| ||| ||| |||||| |||| |||| ||||||||||| |||||||||||||||||    
T  4897528 gagttatgactcattttttacataccacttgaatttcgattgaacatgtctacaaaatttcacgtgcgaatatattttcaaaaataaaaatatgaggcct 4897429  T
Q  306 aatac 310  Q
    |||||    
T  4897428 aatac 4897424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 103 - 280
Target Start/End: Original strand, 22497860 - 22498037
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||| ||||||||| | ||||||||  |||| ||| |||||||||||| ||||||||||||||||||||||||  || |||  ||||| ||||| |      
T  22497860 aacaactgacatcgaactagattgatagaaatttgaaggcaaaaagaattcaaggttcaaataaccaataaaatagttattatgtaaatcaaacttgcta 22497959  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatat 280  Q
    ||||||||||||||| |||||| |||| ||||| | |||||||||||||| ||||| ||||||||| ||| |||||||    
T  22497960 catgaactatgactcctcatttacataccacttaagcttcgagtgaacgtatttacaaaatttgacatacaaaaatat 22498037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 156 - 307
Target Start/End: Complemental strand, 49408811 - 49408660
Alignment:
Q  156 ggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtt 255  Q
    ||||||| |||| ||||||||| |||| ||||||||||||||||||  || || |||||||| |||||| |||| |||||||  ||||| ||||| ||||    
T  49408811 ggttcaactaactaataaaatagctagcattgaaatcgaacttacaatataaattatgactcctcatttacataccacttgagtttcgaatgaacatgtt 49408712  T
Q  256 tacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaa 307  Q
    ||  ||||||||| |||||||||||||  ||||| | |||||||||||||||    
T  49408711 tagaaaatttgacatacgaaaatatttctaaagacacaaatatgaggcctaa 49408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 103 - 280
Target Start/End: Complemental strand, 42430930 - 42430749
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||| |||||||| ||||||||  |||  ||| ||| |||||||| ||||||||||||| ||||||||||  ||| |||||||||||| || |      
T  42430930 aacaaccgaaatcgaattagattgatagaaatctgaaggcacaaagaattcaaggttcaaataatcaataaaataattagcattgaaatcgaatttgcta 42430831  T
Q  203 catgaactatgactcttcatttgcatat----cacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatat 280  Q
    |||||||||||| || |||||| |||||    ||||| | |||| ||||||| ||||||| ||||||||| |||||||||||    
T  42430830 catgaactatgattcctcatttacatatataccacttcagcttcaagtgaacatgtttacaaaatttgacctacgaaaatat 42430749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 49058393 - 49058242
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||| ||||||||||| |||||| ||  ||  ||| ||||||||||||||| ||| ||||||||||||||||| |||  ||| ||||||||||| ||     
T  49058393 aacaactgacatcgaattagattgacaaatatctgaaggcaaaaagaatttaatgttaaaataaccaataaaatagctaacattaaaatcgaacttgcaa 49058294  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttac 258  Q
    |||||||    ||| ||| ||| |||| ||||||| ||| |||||||| |||||||    
T  49058293 catgaac----acttttcgtttacataccacttgagctttgagtgaacatgtttac 49058242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 3071628 - 3071733
Alignment:
Q  109 cgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaa 208  Q
    ||||||| |||| |||||||| ||||   || |||||||||||| || ||||||||||||||||||||| |||| |||||||| ||||||  | ||||||    
T  3071628 cgacatcaaattagattgataggaatctaaaggcaaaaagaattaaaagttcaaataaccaataaaatagctagcattgaaattgaacttgtaacatgaa 3071727  T
Q  209 ctatga 214  Q
    ||||||    
T  3071728 ctatga 3071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 287
Target Start/End: Complemental strand, 38705709 - 38705567
Alignment:
Q  144 aaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaacttcg 243  Q
    ||||||||||||| ||||||||||||||||||||  ||| |||||||| ||| || || |||||| | | |||  ||||||  ||||||||| |  ||||    
T  38705709 aaaagaatttaagattcaaataaccaataaaatagttagcattgaaattgaatttgcaacatgaattttaact-atcatttaaatatcacttaagtttcg 38705611  T
Q  244 agtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaa 287  Q
    || |||| | ||||  |||||||||| || ||||||||||||||    
T  38705610 agcgaacatttttataaaatttgacgaacaaaaatattttcaaa 38705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 42430728 - 42430673
Alignment:
Q  325 aaaaactcgggggcttgaagcccttgctttagtggcaacccccttagacaggccct 380  Q
    |||||||||||||| | ||||| |||||||||||||| ||||||| ||| ||||||    
T  42430728 aaaaactcgggggcctaaagcctttgctttagtggcagcccccttggactggccct 42430673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 116 - 359
Target Start/End: Original strand, 35549709 - 35549944
Alignment:
Q  116 gaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgac 215  Q
    |||||| ||||||| ||||  ||| |||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||| ||   ||||||||    
T  35549709 gaattccattgataggaatctgaaggcaaaaagaatttaaggttcaaataaccaataaaataggtagcattaaaatcgaacttacatca---actatgac 35549805  T
Q  216 tcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatacagata 315  Q
    |||| |||| |||| ||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||| |   |||    
T  35549806 tctttatttacataccacttgagcttcgagtgaacaggtttacgaaatttgatgtacgaaaatattttcaaagataaaa--atgaggcataaca---ata 35549900  T
Q  316 cgaggcatgaaaaactcgggggcttgaagcccttgctttagtgg 359  Q
    |  ||| | |||||||||||||| | ||||||||||||||||||    
T  35549901 cagggcctaaaaaactcgggggcataaagcccttgctttagtgg 35549944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 114 - 310
Target Start/End: Original strand, 5813420 - 5813615
Alignment:
Q  114 tcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatg 213  Q
    ||||||| |||||||| ||||| ||  | |||||||||||||| ||||||||||||||||||||  ||| ||| |||| |||||| || ||| ||||||     
T  5813420 tcgaattagattgataggaatttgagggaaaaaagaatttaagattcaaataaccaataaaatagatagcattaaaattgaacttgcaacataaactata 5813519  T
Q  214 actcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatac 310  Q
    ||||  ||||| |||||||||| |  |||| || ||| ||||||| ||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||    
T  5813520 actccacatttacatatcactttagtttcgcgtcaacatgtttacaaaatttgacatacaaaaatattttcaaaga-aaaaatacgaggcttaatac 5813615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 14389772 - 14389696
Alignment:
Q  234 ttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatac 310  Q
    |||||||| |||||||| | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14389772 ttgaactttgagtgaacatatttataaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatac 14389696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 5816472 - 5816314
Alignment:
Q  149 aatttaaggttcaaataaccaataaaatacctagt-attgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtg 247  Q
    |||||||| |||||||||||||||||||| || |  ||| ||||||||||| || | |  ||||  ||||   |||| |||| || ||||  ||||||||    
T  5816472 aatttaagattcaaataaccaataaaatagcttggcattaaaatcgaacttgcaacctatactacaactccaaatttacataccatttgagtttcgagtg 5816373  T
Q  248 aacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggccta 306  Q
    ||  ||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  5816372 aatatgtttacaaaatttgacatacaaaaatattttcaaagacaaaaatatgaggccta 5816314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 14389854 - 14389768
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaa 189  Q
    ||||| |||||| |||||||||||||| ||||  ||| ||||||| |||||||| | ||||||||||||||||||||||| ||||||    
T  14389854 aacaatcgacattgaattcgattgataggaatcagaaggcaaaaataatttaagatacaaataaccaataaaatacctagcattgaa 14389768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 103 - 298
Target Start/End: Original strand, 1520396 - 1520591
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||| |||||||||||||||||| || |   || | |||| |||| |||||||||||||||||||||||||||||  ||| |||||||||||| |     
T  1520396 aacaaccgtcatcgaattcgattgataggagtcttaaggtaaaaggaatctaaggttcaaataaccaataaaatacctaacattaaaatcgaacttataa 1520495  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatat 298  Q
    ||| |||||| |||||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  1520496 cataaactataactctttatttgcataccacttaaacttcgagtgaacatgttttcgaaatttgacgtacaaaaatattttcaaacataaaaatat 1520591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 35026715 - 35026765
Alignment:
Q  226 catatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaa 276  Q
    |||| ||||||| |||||||||||| ||||||| |||||||||||||||||    
T  35026715 cataccacttgagcttcgagtgaacatgtttacaaaatttgacgtacgaaa 35026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 35026140 - 35026232
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaag-caaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcga 194  Q
    |||||||||||||||||| ||||||||  || ||  ||| |||||||||||  | ||| |||||||||||||||||  ||| |||||||||||    
T  35026140 aacaaccgacatcgaattagattgatattaaatctgaagacaaaaagaattcgaagtttaaataaccaataaaatagttaggattgaaatcga 35026232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 103 - 310
Target Start/End: Complemental strand, 49089682 - 49089475
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||||| ||||| |||||||| ||||   || ||||||||||||||||  ||||||||||||||||||| |||| ||||||||| ||||| ||     
T  49089682 aacaaccgacattgaattagattgataggaatcttaaggcaaaaagaatttaagagtcaaataaccaataaaatagctagcattgaaatcaaacttgcaa 49089583  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgagg 302  Q
    ||| |||||  |||| |||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||  ||||| ||| ||  ||||    
T  49089582 cataaactacaactcctcatttacatatcacttgagcttcgagtgaacatgtttacaaaatttgacgtacgaaaatatttgtaaagacaaagattggagg 49089483  T
Q  303 cctaatac 310  Q
    ||||||||    
T  49089482 cctaatac 49089475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 34618918 - 34619055
Alignment:
Q  173 aaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtac 272  Q
    ||||| |||| ||||||||||||||| || |||||| |||||||| |||||| |||| ||||||| |||||||||||| ||||||| |||||||| ||||    
T  34618918 aaataactagcattgaaatcgaacttgcaacatgaattatgactcctcatttacataccacttgagcttcgagtgaacatgtttacaaaatttgatgtac 34619017  T
Q  273 gaaaatattttcaaagataaaaatatgaggcctaatac 310  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  34619018 gaaaatattttcaaagacaaaaatatgaagcctaatac 34619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 52655609 - 52655442
Alignment:
Q  143 aaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacagcatgaactatgactcttcatttgcatatcacttgaacttc 242  Q
    ||||||||||||| ||||||||||| | ||||||| |  | ||||||||||||||| || ||| || |||| |||| |||||  |||  |||||| |||     
T  52655609 aaaaagaatttaaagttcaaataactagtaaaatagcatgcattgaaatcgaacttgcaacataaattatggctctccatttaaatacaacttgagcttt 52655510  T
Q  243 gagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatac 310  Q
    |||||||| ||||||| |||| | ||||||||||||||||||||| | |||||||| |||| ||||||    
T  52655509 gagtgaacatgtttacaaaatctaacgtacgaaaatattttcaaaaacaaaaatataaggcataatac 52655442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 298
Target Start/End: Complemental strand, 3964816 - 3964621
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    ||||||||||||| | || |||| |||  |||| ||| |||||||||||||||| | |||||||||||||||||  |||| ||  ||||| ||||| ||     
T  3964816 aacaaccgacatcaagttagattaatagaaatttgaaggcaaaaagaatttaagatccaaataaccaataaaatggctagcatataaatcaaacttccat 3964717  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatat 298  Q
    |||||||  | |||||| ||||  ||| ||||||||||| | ||||||   ||||  | ||| || |||| ||||||| ||||||| |||||||||    
T  3964716 catgaaccgtaactctttatttaaataccacttgaactttgggtgaacaaatttataagattagatgtacaaaaatatattcaaagctaaaaatat 3964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 34618856 - 34618909
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaag 156  Q
    ||||||||||||| |||| |||||||| ||||| ||| ||||||||||||||||    
T  34618856 aacaaccgacatcaaattagattgataggaatttgaaggcaaaaagaatttaag 34618909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 3956873 - 3956954
Alignment:
Q  231 cacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagata--aaaatatgaggcctaataca 311  Q
    |||||||  ||||||||||| ||||||  ||||||||||||| |||||||| |||||||||  ||||||||||  ||||||||    
T  3956873 cacttgagattcgagtgaacatgtttat-aaatttgacgtacaaaaatattatcaaagataataaaatatgagagctaataca 3956954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 49095319 - 49095273
Alignment:
Q  264 ttgacgtacgaaaatattttcaaagataaaaatatgaggcctaatac 310  Q
    |||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  49095319 ttgacgtacggaaatatttccaaagacaaaaataggaggcctaatac 49095273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 103 - 309
Target Start/End: Original strand, 41397674 - 41397885
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaag----gttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    |||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||    |||||  |||||||||||||| |||| |||||||||||||||    
T  41397674 aacaaccgacatcgaattagattgataggaatctgaaggcaaaaagaatttaagtatggttcatgtaaccaataaaatagctagcattgaaatcgaactt 41397773  T
Q  199 acagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgttta-cgaaatttgacgtacgaaaatattttcaaagataaaaata 297  Q
     || |||||| |||||||| |  ||| ||||  |||||| |||||||||||| |||||  | |||||||||||||||||||||||||||||| |||||||    
T  41397774 tcaacatgaattatgactccttctttacatacgacttgagcttcgagtgaacatgttttgcaaaatttgacgtacgaaaatattttcaaagacaaaaata 41397873  T
Q  298 tgaggcctaata 309  Q
    || |||||||||    
T  41397874 tggggcctaata 41397885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 102 - 310
Target Start/End: Original strand, 22130479 - 22130687
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaa---agaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    ||||||||||||||||||| |||||||| ||||  ||| ||||||   | |||| ||||||||||||| |||||| ||| |||| |||||||||||||||    
T  22130479 aaacaaccgacatcgaattagattgataggaatctgaatgcaaaacaaaaaattaaaggttcaaataatcaataatatagctagaattgaaatcgaactt 22130578  T
Q  199 acagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatat 298  Q
     || |||||| |||||||| || ||| |||| |||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||  ||||||||    
T  22130579 gcaacatgaagtatgactcctcgtttacataccacttgaacttcgaatgaacgtgtttacaaaatttaacgt---aaaatattttcaaagtcaaaaatat 22130675  T
Q  299 gaggcctaatac 310  Q
    |||||| |||||    
T  22130676 gaggccgaatac 22130687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 102 - 310
Target Start/End: Complemental strand, 40500627 - 40500419
Alignment:
Q  102 aaacaaccgacatcgaattcgattgataagaattcgaaagcaaaa---agaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaactt 198  Q
    ||||||||||||||||||| |||||||| ||||  ||| ||||||   | |||| ||||||||||||| |||||| ||| |||| |||||||||||||||    
T  40500627 aaacaaccgacatcgaattagattgataggaatctgaatgcaaaacaaaaaattaaaggttcaaataatcaataatatagctagaattgaaatcgaactt 40500528  T
Q  199 acagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaaaatat 298  Q
     || |||||| |||||||| || ||| |||| |||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||  ||||||||    
T  40500527 gcaacatgaagtatgactcctcgtttacataccacttgaacttcgaatgaacgtgtttacaaaatttaacgt---aaaatattttcaaagtcaaaaatat 40500431  T
Q  299 gaggcctaatac 310  Q
    |||||| |||||    
T  40500430 gaggccgaatac 40500419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 103 - 307
Target Start/End: Original strand, 48572684 - 48572889
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||| |||| |||| |||||||| ||||  |||  |||||| |||||||||||||||||||||||||||||  ||| ||| |||| |||||| ||     
T  48572684 aacaaccggcatcaaattagattgataggaatcagaagacaaaaaaaatttaaggttcaaataaccaataaaatagttagcattaaaattgaacttgcaa 48572783  T
Q  203 catgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatatttt-caaagataaaaatatgag 301  Q
    ||||||||| ||||| |||||| |||| ||||||| ||||||||||||   ||||| ||||||||||||| |||||||||| |||||| ||||||| |||    
T  48572784 catgaactacgactcctcatttacataccacttgagcttcgagtgaacacatttacaaaatttgacgtacaaaaatattttccaaagacaaaaatacgag 48572883  T
Q  302 gcctaa 307  Q
     |||||    
T  48572884 acctaa 48572889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 26199012 - 26198901
Alignment:
Q  194 aacttacagcatgaactatgactcttcatttgcatatcacttgaacttcgagtgaacgtgtttacgaaatttgacgtacgaaaatattttcaaagataaa 293  Q
    |||||||| |||||| |||||||||||||||||||| ||  |||||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  26199012 aacttacaacatgaagtatgactcttcatttgcataccatgtgaacttcaagtgaacatgttaacgaaatttgacgtacggaaatattttcaaagataaa 26198913  T
Q  294 aatatgaggcct 305  Q
    ||||||||||||    
T  26198912 aatatgaggcct 26198901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 214
Target Start/End: Original strand, 30879434 - 30879544
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||| |  |||| ||||||||| |||| ||| ||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||     
T  30879434 aacaaccgactttaaattagattgataacaatttgaaggcaaaaagaatttaaggtttaaataaccaat-aaatagctagcattgaaatcgaacttgcaa 30879532  T
Q  203 catgaactatga 214  Q
    ||| ||||||||    
T  30879533 cataaactatga 30879544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 22112209 - 22112330
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||||||||||| |||| ||| ||||   || | ||||||||||||||||||||||||| ||||| |||  ||  ||| ||||||||||| ||     
T  22112209 aacaaccgacatcgaattagattaatatgaatctaaaggtaaaaagaatttaaggttcaaataacaaataatataattaaaattaaaatcgaacttgcaa 22112308  T
Q  203 catgaactatgactcttcattt 224  Q
     |||| | ||||||| ||||||    
T  22112309 aatgatccatgactcatcattt 22112330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 40494242 - 40494121
Alignment:
Q  103 aacaaccgacatcgaattcgattgataagaattcgaaagcaaaaagaatttaaggttcaaataaccaataaaatacctagtattgaaatcgaacttacag 202  Q
    |||||||||||||||||| |||| ||| ||||   || | ||||||||||||||||||||||||| ||||| |||  ||  ||| ||||||||||| ||     
T  40494242 aacaaccgacatcgaattagattaatatgaatctaaaggtaaaaagaatttaaggttcaaataacaaataatataattaaaattaaaatcgaacttgcaa 40494143  T
Q  203 catgaactatgactcttcattt 224  Q
     |||| | ||||||| ||||||    
T  40494142 aatgatccatgactcatcattt 40494121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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