View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21649_high_10 (Length: 321)
Name: NF21649_high_10
Description: NF21649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21649_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 1653733 - 1653424
Alignment:
| Q |
1 |
catagaacaaaccaacgcacatctgagagaccaaggcgaaagctttctttgataatgcgagaaatccggaggccagaagggtgacctatgggattagtgt |
100 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1653733 |
cataggacaaaccaacgcacatctgagagaccaaggcgaaagctttctttgataatgcgagaaatccggaggccagaagggtgacctatgggattagtgt |
1653634 |
T |
|
| Q |
101 |
aacggaagtacgaaatgtctccagaaatcatggtagggg-taataactcatctccatgttcttcaaccactttttcctctaaccagacatggccacgcat |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
1653633 |
aacggaagtacgaaatgtctccagaaatcatggtagggggtaataactcatctccatgttcttcaaccactttttcctctaaccacacatggccacgcat |
1653534 |
T |
|
| Q |
200 |
gtcattgggacgccaccatagtctaatatattccttcctccgtttccaaagctgagatgatccagctatgccaaaaacaatatgttgaactgacaaacct |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1653533 |
gtcattgggacgccaccatagtctaatatattccttcctccgtttccaaagctgagatgatccagctatgccaaaaacaatatgttgaactgacaaacct |
1653434 |
T |
|
| Q |
300 |
tcttgttctg |
309 |
Q |
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|||||||||| |
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| T |
1653433 |
tcttgttctg |
1653424 |
T |
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