View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2164_high_1 (Length: 446)
Name: NF2164_high_1
Description: NF2164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2164_high_1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 16 - 441
Target Start/End: Original strand, 9160043 - 9160468
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||| |||||||| ||| |||| || ||||| |||||||||||||| |||||||||||||||||||| ||||||| |||||| |||| ||| |
|
|
| T |
9160043 |
tattcttcctatagttgcaacctcactaatgaaatcttgtccattacccttagacttacccaacatctttatggcaacaaatgcaccacttcttaacttt |
9160142 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9160143 |
cctttataaacagaaccaaaccctccttcacccaacttgtccttaaaacttttagtcatcttctttatatctttgtatgaatacctgattggcatcaagg |
9160242 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggccaagcat |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9160243 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggcctagcat |
9160342 |
T |
|
| Q |
316 |
aaatctcattataaatgatggcaagagataccttccacttattcttcctaattcaatggcaattttagaatcagaaactttggataaatcaaaggctcca |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9160343 |
aaatctcattataaatgatggcaagagataccttccacttattcttcctaattcaatggcaattttagaatcagaaactttggataaatcaaaggctcca |
9160442 |
T |
|
| Q |
416 |
cctaataattccgaacttcttctcac |
441 |
Q |
| |
|
||||||||| | ||||||||| |||| |
|
|
| T |
9160443 |
cctaataatactgaacttcttttcac |
9160468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 323; Significance: 0; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 16 - 433
Target Start/End: Complemental strand, 9317949 - 9317529
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9317949 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
9317850 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
9317849 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacctgattggcatcatgg |
9317750 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggccaagcat |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
9317749 |
tacttccacgaagaaaaacttcaatattttcgtaaattgaggcatgttttcttcgacatgtatatatcaatagcacaaagaaaactacaaggcccgtcgt |
9317650 |
T |
|
| Q |
316 |
aaatctcattataaatgatggcaagagataccttccacttattcttcctaattcaatggcaattttagaatcagaaact---ttggataaatcaaaggct |
412 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||| || |
|
|
| T |
9317649 |
aaatctcattaccaatgatggcaagatataccttccacttattcttcctaatttaatggcaattttggaatcagaaactttgttggataaatcaaattct |
9317550 |
T |
|
| Q |
413 |
ccacctaataattccgaactt |
433 |
Q |
| |
|
|||||| |||||| |||||| |
|
|
| T |
9317549 |
ccacctgctaattctgaactt |
9317529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 9320353 - 9320646
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||||||||| |||||| |||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||| || || || ||| |
|
|
| T |
9320353 |
tattcttcctatggttgcgacttcactaatgaaatcttgtccattacccttagatttacccaacatctttatggccacaaatggcccgctgcatagcttt |
9320452 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||| | |||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| | |
|
|
| T |
9320453 |
cctttataaacagctccaaagcctccttcacccaacttgtctttaaaacttcgagtcatcttctttatttctttgtatgaatacctaattggcatcaaag |
9320552 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggcc |
309 |
Q |
| |
|
|||| || |||||||||||||||||| ||| || ||| |||||||||| | ||| |||||||||||||||||||||||||| | |||||| |
|
|
| T |
9320553 |
tactcccttgaagaaaaacttcaatatcttcatacattgatatatgtcttctccgacaagtatatatcaatagcacaaagaaaaccagaaggcc |
9320646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 9350670 - 9350963
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||||||||| |||||| |||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||| || || || ||| |
|
|
| T |
9350670 |
tattcttcctatggttgcgacttcactaatgaaatcttgtccattacccttagatttacccaacatctttatggccacaaatggcccgctgcatagcttt |
9350769 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||| | ||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||| | |
|
|
| T |
9350770 |
cctttataaacagttccaaagcctccttcacccaacttgtctctaaaacttcgagtcatcttctttatttctttgtatgaatacctaattggcatcaaag |
9350869 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggcc |
309 |
Q |
| |
|
|||| || |||||||||||||||||| ||| || ||| |||||||||| | ||| ||||||||||| |||||||||||||| | |||||| |
|
|
| T |
9350870 |
tactcccttgaagaaaaacttcaatatcttcatatattgatatatgtcttctccgacaagtatatatcaacagcacaaagaaaaccagaaggcc |
9350963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 309
Target Start/End: Complemental strand, 9254687 - 9254394
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||||||||| |||||| |||| || || || |||||||||||||| ||| |||||||||||||||| |||||||| ||||| || ||| |
|
|
| T |
9254687 |
tattcttcctatggttgcgacttcactaatgaaatcatgtccattacccttagatttaaccaacatctttatggcaacaaatggcccactgcgtagcttt |
9254588 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||| |||| || || ||||||||||| |||||| | ||||| ||| ||||||||||||||| |||||||| |||||| | ||||| |||| | |
|
|
| T |
9254587 |
cctttaaaaacggctccaaagcctccttcacccaacttgtctctaaaatttcgagtcatcttctttatttctttgtaagaatacctaattggaatcagag |
9254488 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaactacaaggcc |
309 |
Q |
| |
|
|||| || |||||||||||||||||| ||| || ||| |||||||||| | ||| |||||||||||||||||||||||||| | |||||| |
|
|
| T |
9254487 |
tactcccttgaagaaaaacttcaatatcttcatacattgatatatgtcttctccgacaagtatatatcaatagcacaaagaaaaccagaaggcc |
9254394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 278 - 397
Target Start/End: Complemental strand, 9348616 - 9348497
Alignment:
| Q |
278 |
tatatcaatagcacaaagaaaactacaaggccaagcataaatctcattataaatgatggcaagagataccttccacttattcttcctaattcaatggcaa |
377 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |||| ||| |
|
|
| T |
9348616 |
tatatcaattgcacaaagaaaactacaaggcctaccataaatctcattataaatgatggcaagagataccttgcacttgttcttccgaattgaatgccaa |
9348517 |
T |
|
| Q |
378 |
ttttagaatcagaaactttg |
397 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
9348516 |
ttctagaatcagaaactttg |
9348497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 8942468 - 8942668
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattaccctta-----gagtt-acccaacatctttatggccacaaatggaccactaatt |
109 |
Q |
| |
|
|||||||||||| |||||||||||||| || || ||||||||||| |||||| | ||| |||||||||||||||||| || |||| ||||| | |
|
|
| T |
8942468 |
tattcttcctattgttgcaacttcattgatgaaatcttgcccatttcccttacccttgtgtttacccaacatctttatggctaccgatggcccactgcgt |
8942567 |
T |
|
| Q |
110 |
aaatttcctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggca |
209 |
Q |
| |
|
| ||||| |||||||| ||| | ||||||||||| |||||| ||||||||| ||||||| |||||||| ||| ||||||||||| | ||||||| |
|
|
| T |
8942568 |
agctttcccttataaaccttaccatagcctccttcacccaacttgtccttaaaaccattagtcattttctttatctctgtgtatgaatacctaattggca |
8942667 |
T |
|
| Q |
210 |
t |
210 |
Q |
| |
|
| |
|
|
| T |
8942668 |
t |
8942668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 9453484 - 9453286
Alignment:
| Q |
15 |
atattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacc---caacatctttatggccacaaatggaccactaattaa |
111 |
Q |
| |
|
||||||| |||||||||||||||||| | || || |||||||||||| || || ||| ||||||||||||||| | |||||||||||| |||| |
|
|
| T |
9453484 |
atattctccctatggttgcaacttcacttatgaaatcttgcccattagtttttgatttaattttcaacatctttatggctataaatggaccacttattag |
9453385 |
T |
|
| Q |
112 |
atttcctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcat |
210 |
Q |
| |
|
|||||||||||| ||| || | ||||||||||| || || ||||| |||| | | | ||||| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
9453384 |
atttcctttatacacatctccataacctccttcacccaattttaccttgaaaccttttgccatctgctttatctctttgtatgaataccttattggcat |
9453286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 9000113 - 9000204
Alignment:
| Q |
15 |
atattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccacta |
106 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||||| |||| ||||||||| || || ||||||||||||||||| |||||| | ||||||||| |
|
|
| T |
9000113 |
atattcttccgatggttgagacttcactaataaaatctttcccattacctttcgatttacccaacatctttattgccacacaaggaccacta |
9000204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 9400146 - 9400280
Alignment:
| Q |
76 |
caacatctttatggccacaaatggaccactaattaaatttcctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatc |
175 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| ||||||| |||| ||| || | ||||||||||| || || ||||| ||| || | |||||| |
|
|
| T |
9400146 |
caacatctttatggctacaaatggcccacttattagatttcctctatacacatctccataacctccttcacccaattttaccttgaaattttttgtcatc |
9400245 |
T |
|
| Q |
176 |
ttctttatatctttgtatgaatacttgattggcat |
210 |
Q |
| |
|
| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
9400246 |
tgctttatctctttgtatgaataccttattggcat |
9400280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 8873727 - 8873545
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||| || |||||||| |||||| | ||||||||| |||| ||||| || || |||||||||||||| || |||||| | ||||| ||| || ||| |
|
|
| T |
8873727 |
tattctcccaatggttgctacttcacttataaagtctcgcccgttaccttttgatttacccaacatcttgattgccacacaaggaccgctacgtagtttt |
8873628 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaata |
198 |
Q |
| |
|
|| ||| | ||| || || |||||||||||||| ||| | || |||| ||||| ||| ||||| || |||||||||||||| |
|
|
| T |
8873627 |
cccttaaacacagtgccaaagcctccttcacctaatttgtctttgaaacctctagccattttcttaatttctttgtatgaata |
8873545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 210
Target Start/End: Original strand, 8932598 - 8932752
Alignment:
| Q |
56 |
ccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaatttcctttataaacacaaccgaaccctccttcacctaacttga |
155 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| || || || |||||| | ||||| |||||||| ||| | ||||||||||| ||||| |
|
|
| T |
8932598 |
ccattacccttaagtttgcccaacatctttatggctaccaaaggcccactacgaagctttcccttataaaccttaccatatcctccttcacccaactttt |
8932697 |
T |
|
| Q |
156 |
ccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcat |
210 |
Q |
| |
|
||||||| ||||||||||||| ||||| ||||||||||||||| | |||||||| |
|
|
| T |
8932698 |
ccttaaagcttctagtcatctgttttatctctttgtatgaatacctaattggcat |
8932752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 8964967 - 8965041
Alignment:
| Q |
20 |
cttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccaca |
94 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| ||||||||||| || || ||||| |||||||| || |||||| |
|
|
| T |
8964967 |
cttccaatggttgctacttcattaataaagtcctgcccattaccttttgatttacctaacatcttgattgccaca |
8965041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 9057012 - 9057090
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccaca |
94 |
Q |
| |
|
||||||||| || |||| |||||||| |||||||||||||||||||| || || || |||||||||||||| |||||| |
|
|
| T |
9057012 |
tattcttccaatagttgtgacttcattgataaagtcttgcccattacctttggacttgcccaacatctttattgccaca |
9057090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 9082198 - 9082120
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccaca |
94 |
Q |
| |
|
||||||||| || |||| |||||||| |||||||||||||||||||| || || |||||||||||||| || |||||| |
|
|
| T |
9082198 |
tattcttccaatagttgtgacttcattgataaagtcttgcccattaccttttgacttacccaacatcttgattgccaca |
9082120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 9104646 - 9104572
Alignment:
| Q |
20 |
cttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccaca |
94 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||||| |||||||| || || |||||||||||||| || |||||| |
|
|
| T |
9104646 |
cttccaatggttgctacttcactaataaagtcttgtccattacctttcgacttacccaacatcttgattgccaca |
9104572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 9485785 - 9485651
Alignment:
| Q |
76 |
caacatctttatggccacaaatggaccactaattaaatttcctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatc |
175 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||| ||||||| |||| ||| || | ||||||||||| || || || || ||| || | |||||| |
|
|
| T |
9485785 |
caacatctttatggctacaaatggcccacttattagatttcctctatacacatctccataacctccttcacccaattttactttgaaattttttgtcatc |
9485686 |
T |
|
| Q |
176 |
ttctttatatctttgtatgaatacttgattggcat |
210 |
Q |
| |
|
| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
9485685 |
tgctttatctctttgtatgaataccttattggcat |
9485651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 9142530 - 9142440
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccacta |
106 |
Q |
| |
|
||||||||| ||||| ||||||| ||||||| |||||||||||||| || || ||||||| |||||| || |||||| | ||||||||| |
|
|
| T |
9142530 |
tattcttccgatggtcataacttcactaataaaatcttgcccattaccttttgacttacccagcatcttgattgccacacaaggaccacta |
9142440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 8956601 - 8956674
Alignment:
| Q |
137 |
cctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcat |
210 |
Q |
| |
|
||||||||||| ||||| ||||||| | ||| ||||||| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
8956601 |
cctccttcacccaacttttccttaaagcctctcgtcatctgctttatctctttgtatgaatacctaattggcat |
8956674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 8921147 - 8921191
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccatt |
60 |
Q |
| |
|
|||| ||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
8921147 |
tatttttcctatggttgcaacttcattaatgaaatcttgcccatt |
8921191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 8921274 - 8921336
Alignment:
| Q |
137 |
cctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatac |
199 |
Q |
| |
|
||||||||||| ||||| | ||||| | ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
8921274 |
cctccttcacccaacttttcgttaaagcctctcgtcatcttctttatctctttgtatgaatac |
8921336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 9096468 - 9096390
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccaca |
94 |
Q |
| |
|
||||||||| || |||| |||||||| ||||| |||||||||||||| || || |||||||||| ||| || |||||| |
|
|
| T |
9096468 |
tattcttccaatagttgtgacttcatttataaaatcttgcccattaccttttgaattacccaacaacttgattgccaca |
9096390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 16 - 385
Target Start/End: Complemental strand, 15926855 - 15926486
Alignment:
| Q |
16 |
tattcttcctatggttgcaacttcattaataaagtcttgcccattacccttagagttacccaacatctttatggccacaaatggaccactaattaaattt |
115 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||| ||||| | |||||| ||||||||||||||||||||||||||||| || || || ||| |
|
|
| T |
15926855 |
tattcttcctatggttgccacttcattaataaaatcttgtccattgctcttagatttacccaacatctttatggccacaaatggcccgctgcatagcttt |
15926756 |
T |
|
| Q |
116 |
cctttataaacacaaccgaaccctccttcacctaacttgaccttaaaacttctagtcatcttctttatatctttgtatgaatacttgattggcatcaagg |
215 |
Q |
| |
|
|||||||||||| ||| || || |||||||| |||||| | | |||| |||||||||||| ||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
15926755 |
cctttataaacagcaccaaaaccaccttcacccaacttgtctctgaaacctctagtcatcttttttatttctttgtatgaataccttattggcatcaagg |
15926656 |
T |
|
| Q |
216 |
tacttccacgaagaaaaacttcaatattttcgtaagctgaggtatgtcttcttctacatgtatatatcaatagcacaaagaaaacta-caaggccaagca |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||| ||||||||||| | || |||| | |
|
|
| T |
15926655 |
tacttccacgaagaaaaacttcaatattttcgtaaattgagttatgtctgcttcgacatgtatatatcaatagaacaaagaaaacaatgaatcccaatga |
15926556 |
T |
|
| Q |
315 |
taaatctcattataaatgatggcaagagataccttccacttattcttcctaattcaatggcaattttagaa |
385 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||| ||||| | | |||||||| |||||| ||||||||||| |
|
|
| T |
15926555 |
-aaatctcactataagtgatggcaagatatatcttcctgtgactcttcctatctcaatgccaattttagaa |
15926486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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