View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21650_high_4 (Length: 333)
Name: NF21650_high_4
Description: NF21650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21650_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 7810618 - 7810936
Alignment:
| Q |
13 |
aaaataggtatgcataatacgttaaccgtaatatagtaatctagcttatgacttaatttaattagttcattaagatatatagttacttgcgaaacaagta |
112 |
Q |
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| T |
7810618 |
aaaataggtatgcataatacgttaaccgtcatatagtaatctagcttatgacttaatttaattagttcattaagatatatagttacttgcgaaacaagta |
7810717 |
T |
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| Q |
113 |
aagtaactagttaaactccatagt----------------tgtattttgttgtattgtggacaatatttaaaggcattatatggttaataagatgagtga |
196 |
Q |
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| T |
7810718 |
aagtaactagttaaactccatagttgtattttgttgtagttgtattttgttgtattgtggacaatatttaaaggcattatatggttaataagatgagtga |
7810817 |
T |
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| Q |
197 |
aatcaagtttgattttaacaattggtattagagtctggttgaggattcaacctagagaaccaaaataacttatataagttttcagtttgcaagtttgtta |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7810818 |
aatcaagtttgattttaacaattggtattagagtctggttgaggattcaacctagagaaccaaaataacttatataagttttcagtttgcaagtttgtta |
7810917 |
T |
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| Q |
297 |
cacatgcaatctcaaagat |
315 |
Q |
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||||||||||||||||||| |
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| T |
7810918 |
cacatgcaatctcaaagat |
7810936 |
T |
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