View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21650_low_3 (Length: 379)
Name: NF21650_low_3
Description: NF21650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21650_low_3 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 17 - 372
Target Start/End: Complemental strand, 27878979 - 27878624
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
27878979 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttag |
27878880 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878879 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
27878780 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctg |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27878779 |
gtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagcccctggttcgtagctg |
27878680 |
T |
|
| Q |
317 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878679 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
27878624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 1234751 - 1235018
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
1234751 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
1234848 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234849 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
1234948 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
1234949 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
1235018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 26976398 - 26976131
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26976398 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttaga |
26976301 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976300 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccttggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
26976201 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
26976200 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
26976131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 27874257 - 27873990
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
27874257 |
aaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttaga |
27874160 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874159 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccctttatttgttgaggggtttccacgtaaaatattgtg |
27874060 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
27874059 |
tgttcagttcctcttttctcttctcttattttagatgcgtgataatattttgttactctggtacctaaca |
27873990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 101 - 287
Target Start/End: Original strand, 18968007 - 18968194
Alignment:
| Q |
101 |
ctctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtt |
199 |
Q |
| |
|
||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18968007 |
ctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttttctactcttgccccgtggttttttccccttatttgttgaggggtt |
18968106 |
T |
|
| Q |
200 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
18968107 |
tccacgtaaaatattatgtattcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
18968194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 23 - 288
Target Start/End: Original strand, 30986566 - 30986830
Alignment:
| Q |
23 |
tagtttctcctg-tgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagaga |
121 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||| | ||||||||| |
|
|
| T |
30986566 |
tagtttctcctcatgaggtttctcctaggtagtgtcagt------attcttctatttacaagagagagtggtaattgtactctccttgcatttagagaga |
30986659 |
T |
|
| Q |
122 |
ggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtgg--ttttttccccttatttgttgagggg---tttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
30986660 |
ggtcctgcaatttcttccacttagtgaaagttctctactcttgccccgtggttttttttttccttatttgttgaggggtactttccacgt-aaatattgt |
30986758 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacag |
288 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||| |
|
|
| T |
30986759 |
gcgttcagttcctcttttctcgtctcttattttagctacgtgataatattttgttactctgatacctaacag |
30986830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 65 - 241
Target Start/End: Original strand, 30966747 - 30966923
Alignment:
| Q |
65 |
gtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
164 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||| ||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30966747 |
gtattcttctatttacaagagagagtggtaattgtactctccttgcatttagagagaggttctgcaatttcttccacttagtgaaagttctctactcttg |
30966846 |
T |
|
| Q |
165 |
ccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtct |
241 |
Q |
| |
|
||||||| |||| || |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30966847 |
ccccgtgattttatttcccttatttgttgatgggtttccacgt-aaatattgtgtgttcagttcctcttttctcgtct |
30966923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 30967674 - 30967810
Alignment:
| Q |
236 |
tcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaac |
335 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
30967674 |
tcgtctcttattttagctgcttgataatattttgttactctggtacctaacagtggtatcagagcctttagttcgtagctgttattccgctgcgataaac |
30967773 |
T |
|
| Q |
336 |
tagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30967774 |
tagtggtgtggtaagaaaaatcttagtatgctctgtg |
30967810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 282
Target Start/End: Original strand, 21966680 - 21966860
Alignment:
| Q |
99 |
tactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggt |
198 |
Q |
| |
|
||||||| ||| | ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| | | |||||||| |||||| ||||||||| |
|
|
| T |
21966680 |
tactctctttgaaattagagagaggtcttataatttcttccatttagtgaaagttctctactcttgccccat-gatttttccctttatttattgaggggt |
21966778 |
T |
|
| Q |
199 |
ttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacc |
282 |
Q |
| |
|
|||||| | ||||||| | |||| ||||||||||||||| | | ||| ||||| || |||||||| ||| |||||| ||||||| |
|
|
| T |
21966779 |
ttccacat-aaatattttatgtttagttcctcttttctcatatgtta-tttagctgcgtgataatgtttcgttactttggtacc |
21966860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 372
Target Start/End: Complemental strand, 23012667 - 23012415
Alignment:
| Q |
119 |
agaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgt |
218 |
Q |
| |
|
||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||| ||| | |||||| || | ||||||||||||| || ||||| |
|
|
| T |
23012667 |
agaggtcttgaaatttctctcacttagtgaaagttctctactcttgccca-tggtttttccccttaatttgt-gacgagtttccacgtaaa-taatgtgt |
23012571 |
T |
|
| Q |
219 |
gttcagttcctctttt-ctcgtctcttattttagttgtgtgataata-ttttgttactctggtacctaacagtggtatcagagcccttggttcgtagctg |
316 |
Q |
| |
|
||||| ||| |||||| |||||||||||||||||||| ||||||||| |||| ||||| || |||| |||| || || ||||| |||| |||||| || |
|
|
| T |
23012570 |
gttcaattcttctttttctcgtctcttattttagttgcgtgataatattttttttactttgttacccaacaatgtcatttgagccattggctcgtagttg |
23012471 |
T |
|
| Q |
317 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|| |||| | | |||| |||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
23012470 |
ttgttccacatcaacaaacaagtgcagtggtaagaaaaaacttagtatgctttgtg |
23012415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 17 - 372
Target Start/End: Complemental strand, 30950452 - 30950098
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
30950452 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactttccttgtatttag |
30950353 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30950352 |
agagaggttctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgt |
30950254 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctg |
316 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
30950253 |
gtgttcagttcctcttttctcttatcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagctcctggttcgtagctg |
30950154 |
T |
|
| Q |
317 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950153 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
30950098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 372
Target Start/End: Complemental strand, 48702088 - 48701736
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
48702088 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
48701991 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701990 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
48701891 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48701890 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgt |
48701791 |
T |
|
| Q |
318 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701790 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
48701736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 18 - 372
Target Start/End: Original strand, 42265953 - 42266305
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
42265953 |
aaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttaga |
42266050 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266051 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
42266150 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
42266151 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtatctaacagtggtatcagagccgctggttcgtagctgt |
42266250 |
T |
|
| Q |
318 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266251 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
42266305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 288
Target Start/End: Complemental strand, 30945746 - 30945476
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
30945746 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtatttag |
30945647 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945646 |
agagaggttctgtaatttcttccacttagtgaaagttctctactcttgccccgtgatttttt-cccttatttgttgaggggtttccacgtaaaatattgt |
30945548 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacag |
288 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| |
|
|
| T |
30945547 |
gtgttcagttcctcttttctcttctcttattttagctgcgtgataatattttgttactctgatacctaacag |
30945476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 24520292 - 24520031
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24520292 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttaga |
24520195 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520194 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
24520095 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtac |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24520094 |
tgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgttactctggtac |
24520031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 42270672 - 42270941
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
42270672 |
aaaaatagcttctcctgtgaggtttctcctagtttgtgttagt--ttgtattctcctatttataagagagagtggtaattgtactctccttgtatttaga |
42270769 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270770 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
42270869 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagt |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| |
|
|
| T |
42270870 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtatctaacagt |
42270941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 48697399 - 48697131
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
48697399 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
48697302 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtt-ttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697301 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgt |
48697202 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
48697201 |
gtgttcagttcctcttttctcttctcttattttagctgcgtgataatattttgttactctggtacctaaca |
48697131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 57 - 287
Target Start/End: Original strand, 10427368 - 10427597
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttct |
155 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||| | |
|
|
| T |
10427368 |
tagtgttagtattctcctatttc-aagagagag-ggtaatttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttat |
10427465 |
T |
|
| Q |
156 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgt |
255 |
Q |
| |
|
||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10427466 |
ctactttttccccgtagttttttccccttatttgttgaggggtttccgcgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgc |
10427565 |
T |
|
| Q |
256 |
gtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |
|
|
| T |
10427566 |
gtgataatattctgttactctggtacctaaca |
10427597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 48782850 - 48783031
Alignment:
| Q |
79 |
ataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttt |
178 |
Q |
| |
|
||||||||||||||||||| ||||| | |||| ||||||||||||| | |||||||||||||||||||||||||||| ||| || ||||| |
|
|
| T |
48782850 |
ataagagagagtggtaattgtactc--catgtatttagagagaggtcatctaatttcttccacttagtgaaagttctc---------cccatg--ttttt |
48782936 |
T |
|
| Q |
179 |
ccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttact |
274 |
Q |
| |
|
||| |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||| | | |||||||||||||| |||| |
|
|
| T |
48782937 |
ccctttatttgttgagaaatttccacgtaaa-tattgtgtgttcagttcctgttttctcgtttcttattttaatcgcgtgataatattttgatact |
48783031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 1979269 - 1979375
Alignment:
| Q |
55 |
gttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttc |
154 |
Q |
| |
|
||||||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | || ||||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
1979269 |
gttagtgctagtattctcctgtttataagagagagtggtaaatataccctccttgcattt--agagaggtcgtgtaatttcttcctcttactgaaagtta |
1979366 |
T |
|
| Q |
155 |
tctactctt |
163 |
Q |
| |
|
||||||||| |
|
|
| T |
1979367 |
tctactctt |
1979375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 17248015 - 17248112
Alignment:
| Q |
136 |
ttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctctttt |
234 |
Q |
| |
|
||||||||| |||||||||| ||||||| || |||||||||||||||||||| || |||| |||||| || ||||||||||| || |||| ||||||| |
|
|
| T |
17248015 |
ttccacttaatgaaagttctatactcttatccggtggttttttccccttatttattaagggatttccatgt-aaatattgtgtatttagtttctctttt |
17248112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 30165900 - 30165968
Alignment:
| Q |
208 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactct |
276 |
Q |
| |
|
||||||| |||||||| ||| | ||||||| | ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30165900 |
aaatattatgtgttcaattcattttttctcatatcttattttagttgtgtgatattattttgttactct |
30165968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 21515516 - 21515462
Alignment:
| Q |
246 |
ttttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagc |
300 |
Q |
| |
|
|||||||||||||| |||| |||||||||||| |||| |||| |||||||||||| |
|
|
| T |
21515516 |
ttttagttgtgtgaaaatactttgttactctgatacccaacaatggtatcagagc |
21515462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 36615438 - 36615361
Alignment:
| Q |
208 |
aaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaa |
285 |
Q |
| |
|
||||| ||| ||||| ||| |||||||||| | |||||||||| |||| ||||||||||| ||||||| |||||||| |
|
|
| T |
36615438 |
aaataatgtatgttcggtttctcttttctcatatcttattttaactgtgcgataatattttattactctagtacctaa |
36615361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 1979567 - 1979604
Alignment:
| Q |
183 |
ttatttgttgaggggtttccacgtaaaatattgtgtgtt |
221 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1979567 |
ttatttgttgaggggtttccacgt-aaatattgtgtgtt |
1979604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 1999189 - 1999230
Alignment:
| Q |
267 |
ttgttactctggtacctaacagtggtatcagagcccttggtt |
308 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
1999189 |
ttgttattctgatacctaacagtggtatcagagcacttggtt |
1999230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 18 - 372
Target Start/End: Complemental strand, 5823542 - 5823190
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5823542 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttaga |
5823445 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823444 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
5823345 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5823344 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgt |
5823245 |
T |
|
| Q |
318 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823244 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
5823190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 54545931 - 54546200
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54545931 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttgtagttag |
54546030 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
54546031 |
agagaggtcctgtaatttcatccacttagtgaaagttctctactctagccccgtggttttttccccttatttgttgaggggtttccacgt-aaatattgt |
54546129 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
54546130 |
atgttcagttcctcttttctcatctcttattttagctgcgtgataatattttgttactctggtacctaaca |
54546200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 5818780 - 5818513
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5818780 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttaga |
5818683 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5818682 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttattagttgaggggtttccacgtaaaatattgtg |
5818583 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5818582 |
tgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgttactctggtacctaaca |
5818513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 65 - 372
Target Start/End: Complemental strand, 2817486 - 2817178
Alignment:
| Q |
65 |
gtattctcctatttataagagagag--tggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactct |
162 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||| || |||||||||||||||||||||| |||||| |||||| |
|
|
| T |
2817486 |
gtattctcctatttataagagagagagtggtgattgtactctccttgtatttagagagagttcttgtaatttcttccacttagtgagagttctttactct |
2817387 |
T |
|
| Q |
163 |
tgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataa |
262 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
2817386 |
tgccctgtggttttttccc-ttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcttctcttattttagctgcgtgataa |
2817288 |
T |
|
| Q |
263 |
tattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagt |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
2817287 |
tattttgttactctggtacctaacagtggtatcaaagccgctggttcgtagttgttattccgcagtaataaactagtggtgtggtaagaaaaatcttagt |
2817188 |
T |
|
| Q |
363 |
atgctctgtg |
372 |
Q |
| |
|
||||| |||| |
|
|
| T |
2817187 |
atgctatgtg |
2817178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 24659287 - 24659136
Alignment:
| Q |
134 |
tcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttt |
233 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24659287 |
tcttccacttagtgaaagttct--actcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatgttgtgtgttcagttcctcttt |
24659190 |
T |
|
| Q |
234 |
tctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
24659189 |
tctcatctcttattttagctgtgtgataatattttattactctggtacctaaca |
24659136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 4579254 - 4579360
Alignment:
| Q |
173 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgtta |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4579254 |
ttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgcgtgataatattttgtta |
4579353 |
T |
|
| Q |
273 |
ctctggt |
279 |
Q |
| |
|
||||||| |
|
|
| T |
4579354 |
ctctggt |
4579360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 273
Target Start/End: Complemental strand, 31204936 - 31204781
Alignment:
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgcc-ccgtggttttttccccttatttgttgaggggtttccacgtaaaatattg |
215 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
31204936 |
agagaggttttgtaatttttcccacttagtgaaagttctctactattgcctccgtgattttttcctcttatttgttgaggggtttccacgt-aaatattg |
31204838 |
T |
|
| Q |
216 |
tgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttac |
273 |
Q |
| |
|
|| |||||||||||||||| || |||||| ||||| || ||| |||||||||||||| |
|
|
| T |
31204837 |
tgagttcagttcctctttt-tcatctcttcttttaactgcgtgctaatattttgttac |
31204781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 25877086 - 25877142
Alignment:
| Q |
243 |
ttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagag |
299 |
Q |
| |
|
|||||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
25877086 |
ttattttagttgcgtaataatattatgttattctggtacctaacagtggtatcagag |
25877142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 35977103 - 35977258
Alignment:
| Q |
92 |
gtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttc-tctactcttgccccgtggttttttccccttatttgt |
190 |
Q |
| |
|
|||||| | ||||||||||| ||||||||| ||| |||||||| ||||||||||||||| || | |||||||||| ||| |||||||| ||| ||| |
|
|
| T |
35977103 |
gtaattgttctctccttgtatttagagagaagtcttgtaattttttccacttagtgaaaactcttttactcttgccaagtgagtttttccc--tatatgt |
35977200 |
T |
|
| Q |
191 |
tgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttatttt |
249 |
Q |
| |
|
||| || ||| |||| ||||||||| |||||| || |||||||||| |||||||||| |
|
|
| T |
35977201 |
tgatggttttttacgt-aaatattgtttgttcaatttctcttttctcacctcttatttt |
35977258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 24671248 - 24671173
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaattt |
134 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
24671248 |
tagtgttagtattctcctatttc-aagagagag-ggtaatttgtctctccttgtatttagagagaagtcttgtaattt |
24671173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 372
Target Start/End: Complemental strand, 9444359 - 9444007
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
9444359 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
9444262 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444261 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
9444162 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9444161 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgt |
9444062 |
T |
|
| Q |
318 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444061 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
9444007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 9439639 - 9439372
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
9439639 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
9439542 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439541 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
9439442 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
9439441 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
9439372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 4799315 - 4799371
Alignment:
| Q |
214 |
tgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgt |
270 |
Q |
| |
|
|||||||||| || |||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
4799315 |
tgtgtgttcaatttctcttttctcatctcttattttagcagtgtgataatattttgt |
4799371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 304; Significance: 1e-171; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 372
Target Start/End: Original strand, 41718460 - 41718812
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
41718460 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
41718557 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718558 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
41718657 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
41718658 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgt |
41718757 |
T |
|
| Q |
318 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718758 |
tattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
41718812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 34360005 - 34360273
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34360005 |
aaaaattagtttctcctgtgagatttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttag |
34360102 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34360103 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttctacgtaaaatattgt |
34360202 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
34360203 |
gtgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
34360273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 41723186 - 41723453
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
41723186 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
41723283 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723284 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
41723383 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
41723384 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaaca |
41723453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 287
Target Start/End: Complemental strand, 29585568 - 29585300
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
29585568 |
aaaaattagtttctcctgtgaggtttctcctagtttgtattagt--tagtattctcctatttataagagagagtggtaattgtactctctttgtagttag |
29585471 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585470 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
29585371 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
29585370 |
gtgttcagttcctcttttctcgtctcttattttagctgcatgataatattttgttactctgatacctaaca |
29585300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 268
Target Start/End: Original strand, 34352297 - 34352546
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| | |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34352297 |
aaaaattagtttctcctgtgagatttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtaattgtactctccttgtagttag |
34352394 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352395 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
34352494 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatatttt |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
34352495 |
gtgttcagttcctcttttctcgtctcttattttagctgcgtgataatatttt |
34352546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 23319458 - 23319392
Alignment:
| Q |
243 |
ttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgt |
311 |
Q |
| |
|
||||||||||||||| |||||||| |||| | || |||||||||||||||||||||| ||||||||| |
|
|
| T |
23319458 |
ttattttagttgtgtaataatatt--gttattatgatacctaacagtggtatcagagcttttggttcgt |
23319392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 124 - 372
Target Start/End: Original strand, 825632 - 825881
Alignment:
| Q |
124 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
825632 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttttttccccttatttgttgagtggtttccacgtaaaatattgtgtgttc |
825731 |
T |
|
| Q |
223 |
agttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattc |
322 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
825732 |
agttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctggtacctaacagtggtatcagagccgctggttcgtagctgttattc |
825831 |
T |
|
| Q |
323 |
cgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
825832 |
cgctgtgataaactagtgaagtggtaagaaaaatcttagtatgctctgtg |
825881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 5198922 - 5198664
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
5198922 |
aaaaatagtttctcctgtgaggtttctcctagtttgtgttagt--tagtattctcctatttataagagagagtggtatttgtactctccttgtagttaga |
5198825 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198824 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
5198725 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctgg |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
5198724 |
tgttcagttcctcttttctcgtctcttattttagctgcgtgataatattttgttactctgg |
5198664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 365
Target Start/End: Original strand, 15602926 - 15603272
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttag |
116 |
Q |
| |
|
||||||||| || | || ||||||||||| ||| ||||||||| | ||||||||||||||| |||| ||| |||||||| ||| |||| || | |||| |
|
|
| T |
15602926 |
aaaaattagatttttctatgaggtttctcttagtaagtgttagt--tagtattctcctatttacaagatagaatggtaattgtacactccatgcatttag |
15603023 |
T |
|
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603024 |
agagaggtcttgtaatttcttctacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
15603123 |
T |
|
| Q |
217 |
gtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagcccttggttcgtagctg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||| ||| ||||||| |||||||| | |||||||||| || |
|
|
| T |
15603124 |
gtgttcagttcctcttttctcgtctcttatttcaattgcgtgataatattttcttactctcacacccaacagtgctatcagagtcattggttcgtaattg |
15603223 |
T |
|
| Q |
317 |
ttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatg |
365 |
Q |
| |
|
|||||||| || | ||||| |||||||||||||||| ||||||||||| |
|
|
| T |
15603224 |
ttattccgatgcaaaaaactggtggagtggtaagaaatatcttagtatg |
15603272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 830288 - 830452
Alignment:
| Q |
124 |
tcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggtttt-ttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830288 |
tcctgtaatttcttccacttagtgaaagttctccactcttgccccgtggtttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttc |
830387 |
T |
|
| Q |
223 |
agttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
830388 |
agttcctcttttctcgtctcttattttaactgcgtgataatattttgttactctggtacctaaca |
830452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 28715816 - 28716070
Alignment:
| Q |
18 |
aaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttaga |
117 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| || | ||||||||| ||||||||||| | ||||| |
|
|
| T |
28715816 |
aaaaatagtttctcttgtaaggtttctcctaggtagtgttagt------attctcctatttataggaaacggtggtaattgtactctccttgcatttaga |
28715909 |
T |
|
| Q |
118 |
gagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtg |
217 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
28715910 |
gagatgtcctgtaatttcttccactttgtgaaagttctctattcttctcttgtgg-tttttccccttatttaatgaggggtttccacgt-aaatattgtg |
28716007 |
T |
|
| Q |
218 |
tgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggta |
280 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
28716008 |
tgttcaattcctcttttgtcgtctcttattttaaatgtgtgataatattttgttactctggta |
28716070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 30397096 - 30396920
Alignment:
| Q |
101 |
ctctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaa-gttctctactcttgccccgtggttttttccccttatttgttgaggggtt |
199 |
Q |
| |
|
||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
30397096 |
ctctccttgtatatagaaagaggtcttgtaatttcttccacttagtgaaaagttctctactctcgccctgtgatttttttcccttatttgttgaggggtt |
30396997 |
T |
|
| Q |
200 |
tccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctgg |
278 |
Q |
| |
|
|| ||| ||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
30396996 |
tcaacg-aaaatat-gtgtgttcagttcgtcttttctcgtctcttattttagctgcgtgataatattttgctactctgg |
30396920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 365
Target Start/End: Complemental strand, 13844014 - 13843719
Alignment:
| Q |
67 |
attctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgcc |
166 |
Q |
| |
|
|||||||||||| ||| | |||||||||||| || ||| |||||| ||| | || ||||||||||||||||||||||| ||||| |||| |||| || | |
|
|
| T |
13844014 |
attctcctatttttaaaatagagtggtaattttattcttcttgtatttataaaggggtcctgtaatttcttccacttaatgaaaattctatacttttaac |
13843915 |
T |
|
| Q |
167 |
ccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttca-gttcctcttttctcgtctcttattttagttgtgtgataatat |
265 |
Q |
| |
|
| | |||||| |||||||||||||||||||||||||| |||||| |||||||| || || ||||||| |||| |||| || |||||||||| |
|
|
| T |
13843914 |
ctat-aatttttctccttatttgttgaggggtttccacgt-aaatat--tgtgttcatttttcttttttctcaaaacttactttacttacgtgataatat |
13843819 |
T |
|
| Q |
266 |
tttgttactctggtacctaacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatg |
365 |
Q |
| |
|
||| |||||||| || | | |||||||| |||||| |||| |||| ||| ||||||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
13843818 |
tttattactctgatagccacaagtggtattagagccattggctcgtgatagttgttccgctgtagcaaactggtggagtggtaagaaaaatattagtatg |
13843719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 830234 - 830291
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct |
74 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830234 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct |
830291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 31593068 - 31592910
Alignment:
| Q |
127 |
tgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagtt |
226 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| | |||||||||| | |||||| ||||| | |||||||||||| |||||| |||| ||| |
|
|
| T |
31593068 |
tgtaatttctttcggttagtgaaagttctctactcttatct-gtggttttttttc-ttatttattgagagatttccacgtaaattattgtatgttatgtt |
31592971 |
T |
|
| Q |
227 |
cctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||| ||||||| || |||| |||| |
|
|
| T |
31592970 |
cctcttttctcgtctcttattctatctgtgtgataatattatgttactttgatacccaaca |
31592910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 825578 - 825635
Alignment:
| Q |
17 |
aaaaattagtttctcctgtgaggtttctcctaggtagtgttagtgtttgtattctcct |
74 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
825578 |
aaaaattagtttctcctgcgaggtttctcctaggtagtgttagtgtttgtattctcct |
825635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 192
Target Start/End: Original strand, 8004161 - 8004292
Alignment:
| Q |
59 |
gtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctcta |
158 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||| |||||| ||| | ||| |||||||| | |||||||||||| | |||||||||| |||| |
|
|
| T |
8004161 |
gtgttagtattctcctatttataagagagagt-gtaattgtactcttcttacatttaaagagaggttttataatttcttccattcagtgaaagttttcta |
8004259 |
T |
|
| Q |
159 |
ctcttgccccgtggttttttccccttatttgttg |
192 |
Q |
| |
|
|| | |||||| | ||||||| ||||||||||| |
|
|
| T |
8004260 |
gtcataccccgttg-tttttcctcttatttgttg |
8004292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 287
Target Start/End: Complemental strand, 13840456 - 13840240
Alignment:
| Q |
65 |
gtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
164 |
Q |
| |
|
||||||| ||||| ||||||||| | |||||| |||||||||| || |||||||||||| |||||||| || |||| || ||| || |||||||||| |
|
|
| T |
13840456 |
gtattcttttatttttaagagagaattgtaattgtactctccttatatttagagagaggttttgtaattt-ttttacttggtaaaaattttctactcttg |
13840358 |
T |
|
| Q |
165 |
ccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataata |
264 |
Q |
| |
|
| || || |||| |||||| |||||||||| || || || |||||| ||||||| ||||||| |||||| ||| ||||| || || ||||||||| |
|
|
| T |
13840357 |
ctccatg--ttttcccccttgtttgttgaggaattctcatgt-aaatat--tgtgttcggttcctcctttctcatcttttattataattacgtgataata |
13840263 |
T |
|
| Q |
265 |
ttttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||| ||||||||| |||| |
|
|
| T |
13840262 |
ttttgttattctggtacccaaca |
13840240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 12175881 - 12175768
Alignment:
| Q |
152 |
ttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttag |
251 |
Q |
| |
|
||||||||||||| || | ||||||||| |||||| ||||| |||||||| ||||||||||||||||| || || |||| || ||| ||||||||| |
|
|
| T |
12175881 |
ttctctactcttgtccaattgttttttcca-ttatttattgagatgtttccaca-aaaatattgtgtgttcaatttcttttttatcatcttttattttag |
12175784 |
T |
|
| Q |
252 |
ttgtgtgataatattt |
267 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
12175783 |
ttgcgtgataatattt |
12175768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 42117769 - 42117876
Alignment:
| Q |
117 |
agagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgt |
216 |
Q |
| |
|
||||||||| | |||||||| | ||| |||||||| |||||| ||| | ||||||||| |||||||||| ||||| |||||| |||| ||||||||| |
|
|
| T |
42117769 |
agagaggtcttataatttctctcgtttaatgaaagttatctacttttgtctcgtggtttt-tccccttattaattgagaggtttctacgt-aaatattgt |
42117866 |
T |
|
| Q |
217 |
gtgttcagtt |
226 |
Q |
| |
|
||||||||| |
|
|
| T |
42117867 |
atgttcagtt |
42117876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 57 - 282
Target Start/End: Complemental strand, 16183860 - 16183636
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttct |
155 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
16183860 |
tagtgttagtattctcctatttc-aagagagag-ggtaatttgtctctccttgtatttagagagaggtcttgtaattgtcttccacttagtgaaagttct |
16183763 |
T |
|
| Q |
156 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
16183762 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagctgc |
16183663 |
T |
|
| Q |
256 |
gtgataatattttgttactctggtacc |
282 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
16183662 |
gtgataatattttgttactctggtacc |
16183636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 30235067 - 30235339
Alignment:
| Q |
17 |
aaaaattagtttctcctg-tgaggtttctcctaggtagtgttagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagtta |
115 |
Q |
| |
|
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || |
|
|
| T |
30235067 |
aaaaattagtttctccttatgaggtttctcttacgtagtgttagtgtttgtattctcctatttataagagagagtggtaattgtactctccttataaata |
30235166 |
T |
|
| Q |
116 |
-gagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtgg-ttttttccccttatttgttgaggggtttccacgtaaaatat |
213 |
Q |
| |
|
||||||||||||||||||||||| | ||| |||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
30235167 |
ggagagaggtcctgtaatttcttctagttattgaaagttttctactcttatcccgtggtttttttccccttattcgttgaggggtttccacgt-aaatat |
30235265 |
T |
|
| Q |
214 |
tgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||| | | ||||||||| ||||| ||||||||||| |||||||||||| |||| |
|
|
| T |
30235266 |
tgtgtgttcagttcctcttttctcattttttattttagctgtgtaataatattttgctactctggtacccaaca |
30235339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 65 - 311
Target Start/End: Complemental strand, 8140183 - 8139940
Alignment:
| Q |
65 |
gtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttg |
164 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||| | ||||||||||| | |||||||||||||| |||||||||| |||| |||| |
|
|
| T |
8140183 |
gtattctcctatttc-aagagagag-ggtaatttgtctctccttgtattaagagagaggtcttataatttcttccactgagtgaaagttttctaatctta |
8140086 |
T |
|
| Q |
165 |
ccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataata |
264 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
8140085 |
ccccatggttttctccccttatttgttgaggggtttccacataaa-tattgtgcgttcagtttctcttttctcatctcttattttagctgtgtgataata |
8139987 |
T |
|
| Q |
265 |
ttttgttactctggtacctaacagtggtatcagagcccttggttcgt |
311 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| ||||||||| |
|
|
| T |
8139986 |
ttttgttactctggtacccaacagtggtattagagccattggttcgt |
8139940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 101 - 367
Target Start/End: Complemental strand, 8138645 - 8138384
Alignment:
| Q |
101 |
ctctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggttt |
200 |
Q |
| |
|
||||||||||| |||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||| |||||| |||||||| |
|
|
| T |
8138645 |
ctctccttgtatttagagggaggtcttgtaatttcttccatttagtgaaagttctctaatcttgcctcgtggttttctccccttgtttgttaaggggttt |
8138546 |
T |
|
| Q |
201 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacctaacagtggtatcagagc |
300 |
Q |
| |
|
|||| | || || |||||||| |||| ||||||||||||||||||||||| || ||||||||| |||| ||||||| |||| ||||||||||| ||||| |
|
|
| T |
8138545 |
ccacat-aattactgtgtgttaagtttttcttttctcgtctcttattttagctgcgtgataatactttgatactctgctacccaacagtggtattagagc |
8138447 |
T |
|
| Q |
301 |
ccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgct |
367 |
Q |
| |
|
| ||||||||| | ||||||| || | |||| || ||||||||||||||||||||||||||| |
|
|
| T |
8138446 |
cattggttcgttgtcgttattctgccg----caactggtcgagtggtaagaaaaatcttagtatgct |
8138384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 25441073 - 25441161
Alignment:
| Q |
284 |
aacagtggtatcagagcccttggttcgtagctgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
372 |
Q |
| |
|
|||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25441073 |
aacagtggtatcagagccattgatttgtagttgttattccgctgtgataaactagtggagtggtaagaaaaatcttagtatgctctgtg |
25441161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 274
Target Start/End: Complemental strand, 5102749 - 5102606
Alignment:
| Q |
129 |
taatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcc |
228 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||||||||| || |||||||| |||||||||||||||||| |||| | ||||| |||| ||| || ||| || |
|
|
| T |
5102749 |
taatttctcccacttagtaaaagttatctactcttgctccatggttttt-ccccttatttgttgagggttttc-atgtaaa-tattatgtatttagtccc |
5102653 |
T |
|
| Q |
229 |
tctttt-ctcgtctcttattttagttgtgtgataatattttgttact |
274 |
Q |
| |
|
|||||| ||| ||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
5102652 |
tctttttctcatcttttattttagttgagtgataatattttgttact |
5102606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 36528529 - 36528415
Alignment:
| Q |
172 |
gttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgtt |
271 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||| || || || |||||| |
|
|
| T |
36528529 |
gttttttttccttattcgtggaggggtttccacgtaaa-tattgtgtgttcaattcctctattctcatctcttattttagttgcgtaattttactttgtt |
36528431 |
T |
|
| Q |
272 |
actctggtacctaaca |
287 |
Q |
| |
|
|||||| |||| |||| |
|
|
| T |
36528430 |
actctgatacccaaca |
36528415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 57 - 287
Target Start/End: Complemental strand, 27455 - 27226
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttct |
155 |
Q |
| |
|
||||||| |||||| ||||||| |||||||| |||||||| ||||||||||| ||||||||| || ||||||| |||||||||||||||||||||| |
|
|
| T |
27455 |
tagtgttagtattcacctatttc-aagagaga-tggtaatttgtctctccttgtatttagagagaagtattgtaattgtcttccacttagtgaaagttct |
27358 |
T |
|
| Q |
156 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
27357 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaagtattgtgtgttcagtttctcttttctcgtctcttattttagctgc |
27258 |
T |
|
| Q |
256 |
gtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
27257 |
gtgataatattttgttactctggtacctaaca |
27226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 141; Significance: 8e-74; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 57 - 287
Target Start/End: Original strand, 46191319 - 46191546
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttct |
155 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||||| |||||||| || ||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
46191319 |
tagtgttagtattctcctatttc-aagagagag-ggtaatttgtctctccttctatttagagagaagtcttgtaattgtcttccacttagtgaaagttct |
46191416 |
T |
|
| Q |
156 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgt |
255 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
46191417 |
ctactcttgtcccgtggttttttccccttatttgttgaggggtttccacgtaaaatat--tgtgttcagttcctcttttctcgtctcttattttagctgc |
46191514 |
T |
|
| Q |
256 |
gtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
46191515 |
atgataatattttgttactctggttcctaaca |
46191546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 57 - 287
Target Start/End: Original strand, 4130173 - 4130401
Alignment:
| Q |
57 |
tagtgtttgtattctcctatttataagagagagtggtaattatactctccttgtagttagagagaggtcctgtaatt-tcttccacttagtgaaagttct |
155 |
Q |
| |
|
||||||| ||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4130173 |
tagtgttagtattgtcctatttc-aagagagag-ggtaatttgtctctccttgtatttagagagaagtcttgtaattatcttccacttagtgaaagttct |
4130270 |
T |
|
| Q |
156 |
ctactcttgccccgtggttttttccccttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgt |
255 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4130271 |
ctactcttgccccgtggttttttccctttatttgttgagggatttccacgt-aaattttgtgtgttcagttcctcttttctcgtcacttattttagttgc |
4130369 |
T |
|
| Q |
256 |
gtgataatattttgttactctggtacctaaca |
287 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |
|
|
| T |
4130370 |
gtgataatattttgttactcaagtacctaaca |
4130401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 101 - 282
Target Start/End: Complemental strand, 30697300 - 30697120
Alignment:
| Q |
101 |
ctctccttgtagttagagagaggtcctgtaatttcttccacttagtgaaagttctctactcttgccccgtggttttttccccttatttgttgaggggttt |
200 |
Q |
| |
|
||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
30697300 |
ctctccttgtatttagaaagaggtcttgtaatttcttccacttagtgaaagttctctactcttgccacgtggctttttccccttatttgttgaggggttt |
30697201 |
T |
|
| Q |
201 |
ccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacc |
282 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||| |
|
|
| T |
30697200 |
ccacgt-aaatattttgtgttaagttcctcttttctcgtctcttatgttagctgcgtgataatattttgttactctagtacc |
30697120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 364683 - 364786
Alignment:
| Q |
183 |
ttatttgttgaggggtttccacgtaaaatattgtgtgttcagttcctcttttctcgtctcttattttagttgtgtgataatattttgttactctggtacc |
282 |
Q |
| |
|
||||| ||| ||||| ||| ||||||| ||||||||| || ||||| ||||||| ||| |||||||| |||| ||||| |||||| ||||||| ||||| |
|
|
| T |
364683 |
ttattggttaaggggattcaacgtaaa-tattgtgtggtcgattccttttttctcatctattattttaattgtatgatattattttattactctcgtacc |
364781 |
T |
|
| Q |
283 |
taaca |
287 |
Q |
| |
|
|||| |
|
|
| T |
364782 |
aaaca |
364786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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