View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21651_high_2 (Length: 270)
Name: NF21651_high_2
Description: NF21651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21651_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 2239825 - 2239584
Alignment:
| Q |
17 |
acaattcaagaggatagaaagatataaatactaaagacagaaaaactacctttaatataatttaacatatataatcacagacatctactgatatacaaaa |
116 |
Q |
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||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2239825 |
acaatacaagaggatagaaagatataaatactaaagacacaaaaactacctttaatacaatttaacatatataatcatagacatctactgatatacaaaa |
2239726 |
T |
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| Q |
117 |
catttacaatttatcccctaaaatatggatcacttagaaatgaattggagaaagtccctccaatattagggaaaagggtgagaaaacatatcaagccaag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2239725 |
catttacaatttatcccctaaaatatggatcacttagaaatgaattggagaaagtccctccaatattagggaaaagggtgagaaaacatatcaagccaag |
2239626 |
T |
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| Q |
217 |
aacaataccccaagcatatctgctttcccctagggggatgat |
258 |
Q |
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||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
2239625 |
aacaataccccaagcatatctgctttcccctagaggggtgat |
2239584 |
T |
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