View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21656_high_26 (Length: 390)

Name: NF21656_high_26
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21656_high_26
NF21656_high_26
[»] chr8 (15 HSPs)
chr8 (1-369)||(44633779-44634150)
chr8 (1-54)||(14816570-14816623)
chr8 (1-54)||(14829117-14829170)
chr8 (1-54)||(39567063-39567116)
chr8 (1-53)||(45378553-45378605)
chr8 (1-54)||(9311021-9311074)
chr8 (1-54)||(39270799-39270852)
chr8 (303-358)||(44622605-44622660)
chr8 (3-54)||(45377427-45377478)
chr8 (1-51)||(9312181-9312231)
chr8 (1-51)||(44632709-44632759)
chr8 (1-54)||(13463153-13463206)
chr8 (4-52)||(39568516-39568564)
chr8 (17-54)||(14819391-14819428)
chr8 (1-54)||(22013957-22014010)
[»] chr4 (18 HSPs)
chr4 (1-54)||(702655-702708)
chr4 (1-54)||(756487-756540)
chr4 (1-54)||(770954-771007)
chr4 (1-54)||(35060458-35060511)
chr4 (1-54)||(701633-701686)
chr4 (1-54)||(769932-769985)
chr4 (1-54)||(16038275-16038328)
chr4 (1-54)||(35055333-35055386)
chr4 (1-54)||(757504-757557)
chr4 (1-54)||(36220605-36220658)
chr4 (1-54)||(11038577-11038630)
chr4 (1-54)||(51645976-51646029)
chr4 (1-52)||(16039683-16039734)
chr4 (1-54)||(40681506-40681559)
chr4 (1-53)||(36219408-36219460)
chr4 (1-54)||(41845501-41845554)
chr4 (1-53)||(1098401-1098453)
chr4 (6-54)||(11039740-11039788)
[»] chr2 (13 HSPs)
chr2 (4-54)||(35738363-35738413)
chr2 (1-54)||(36889752-36889805)
chr2 (1-54)||(36888338-36888391)
chr2 (1-54)||(3603504-3603557)
chr2 (1-54)||(7184881-7184934)
chr2 (1-54)||(43820333-43820386)
chr2 (6-53)||(13809426-13809473)
chr2 (6-53)||(3607049-3607098)
chr2 (1-51)||(40468049-40468099)
chr2 (1-54)||(8028966-8029019)
chr2 (1-54)||(19297527-19297580)
chr2 (1-54)||(20686682-20686735)
chr2 (2-54)||(15044739-15044791)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-54)||(71834-71887)
scaffold0029 (1-54)||(70669-70722)
[»] chr7 (10 HSPs)
chr7 (1-54)||(21709158-21709211)
chr7 (1-53)||(26024888-26024940)
chr7 (1-54)||(21710606-21710659)
chr7 (1-54)||(40738193-40738246)
chr7 (1-54)||(45088257-45088310)
chr7 (1-52)||(19543492-19543543)
chr7 (1-52)||(45087067-45087118)
chr7 (1-54)||(30766689-30766742)
chr7 (6-54)||(10986695-10986743)
chr7 (6-54)||(26025876-26025924)
[»] chr6 (13 HSPs)
chr6 (1-54)||(21611915-21611968)
chr6 (1-54)||(21282817-21282870)
chr6 (3-54)||(5660198-5660249)
chr6 (1-54)||(29744781-29744834)
chr6 (1-54)||(29751145-29751198)
chr6 (1-52)||(5659106-5659158)
chr6 (1-54)||(12260446-12260499)
chr6 (1-54)||(14403688-14403741)
chr6 (2-54)||(29467291-29467343)
chr6 (1-52)||(17971852-17971903)
chr6 (15-54)||(21283922-21283961)
chr6 (1-48)||(21612886-21612933)
chr6 (5-54)||(29465755-29465804)
[»] chr1 (17 HSPs)
chr1 (1-54)||(51597961-51598014)
chr1 (6-54)||(51599443-51599491)
chr1 (3-54)||(16963433-16963484)
chr1 (2-54)||(16962010-16962062)
chr1 (1-54)||(6241253-6241306)
chr1 (1-54)||(46015862-46015915)
chr1 (1-53)||(50682592-50682644)
chr1 (1-51)||(33333417-33333467)
chr1 (1-54)||(15073932-15073985)
chr1 (8-54)||(46014701-46014747)
chr1 (1-54)||(6242702-6242755)
chr1 (1-54)||(7964113-7964166)
chr1 (1-54)||(24326582-24326635)
chr1 (1-54)||(33332177-33332230)
chr1 (1-54)||(36143140-36143193)
chr1 (1-54)||(47113119-47113172)
chr1 (1-53)||(32194000-32194052)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-54)||(123424-123477)
scaffold0031 (1-54)||(134300-134353)
scaffold0031 (1-54)||(129424-129477)
[»] chr3 (14 HSPs)
chr3 (4-53)||(21815909-21815958)
chr3 (1-53)||(21817405-21817457)
chr3 (1-54)||(20184448-20184501)
chr3 (1-54)||(27688486-27688539)
chr3 (1-54)||(27695580-27695633)
chr3 (1-54)||(32304232-32304285)
chr3 (1-54)||(39992499-39992552)
chr3 (1-52)||(39991507-39991558)
chr3 (4-54)||(14859141-14859191)
chr3 (1-54)||(17509464-17509517)
chr3 (1-54)||(40503737-40503790)
chr3 (1-54)||(42540163-42540216)
chr3 (1-54)||(45940685-45940738)
chr3 (11-51)||(49221510-49221550)
[»] chr5 (4 HSPs)
chr5 (6-54)||(19718900-19718948)
chr5 (1-54)||(4959561-4959614)
chr5 (1-54)||(16669506-16669559)
chr5 (2-54)||(25333194-25333246)
[»] scaffold0394 (1 HSPs)
scaffold0394 (1-54)||(14270-14324)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-54)||(19250-19303)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-54)||(83391-83444)


Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 369
Target Start/End: Original strand, 44633779 - 44634150
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagccnnnnnnn--------gt-ctactcttaata----aatatactcaaa 87  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |               || ||||||||||||    ||||||||||||    
T  44633779 gggaccaaagcgataccaaaaaattagttaaggaaccaaaatagcaattaagacaaaaaaaaaaaaaaagtactactcttaataaataaatatactcaaa 44633878  T
Q  88 atatcaattacgcttgaatttgaaaagtatgaaactaaagagaagaagtagcatctaattaatactttttatttaaaaaattaaacaccaacaagtaaac 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44633879 atatcaattacgcttgaatttgaaaagtatgaaactaaagagaagaagtagcatctaattaatactttttatttaaaaaattaaacaccaacaagtaaac 44633978  T
Q  188 tgtaaatagataaatgtagttgctcataacaatgtggcaagagaatgaaaatcgttgcgaccacaagtaaatagttctgaaatagcttgccttcgttgcc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          | |||| ||||||||||||||    
T  44633979 tgtaaatagataaatgtagttgctcataacaatgtggcaagagaatgaaaatcgttgcgaccacaagta----------atatagtttgccttcgttgcc 44634068  T
Q  288 attaaatacaaaacgtgaaactatggattgaaagcctttgccaaaccaaaagcagctgcggatgcaatggcgccgatgagag 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44634069 attaaatacaaaacgtgaaactatggattgaaagcctttgccaaaccaaaagcagctgcggatgcaatggcgccgatgagag 44634150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14816623 - 14816570
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  14816623 gggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 14816570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14829117 - 14829170
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  14829117 gggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 14829170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39567116 - 39567063
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39567116 gggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcc 39567063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45378553 - 45378605
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  45378553 gggaccaaagcgataccaaaaaattatttaagggacgaaaatagcaattaagc 45378605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9311074 - 9311021
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  9311074 gggaccaaagcgataccaaaaaattagataagggactaaaatagcaattaagcc 9311021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39270799 - 39270852
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  39270799 gggaccaaaacgataccaaaaaataagttaagggacgaaaatagcaattaagcc 39270852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 44622605 - 44622660
Alignment:
Q  303 tgaaactatggattgaaagcctttgccaaaccaaaagcagctgcggatgcaatggc 358  Q
    ||||||||||||| ||||||||||||||||||| ||||||| || || ||||||||    
T  44622605 tgaaactatggatggaaagcctttgccaaaccataagcagccgcagaggcaatggc 44622660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 45377478 - 45377427
Alignment:
Q  3 gaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  45377478 gaccaaagcgataccaaaaaatcaattaagggacgaaaataacaattaagcc 45377427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9312181 - 9312231
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaa 51  Q
    |||| |||||||||||||||||||||||||| | || ||||||||||||||    
T  9312181 gggatcaaagcgataccaaaaaattagttaaaggactaaaatagcaattaa 9312231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44632759 - 44632709
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaa 51  Q
    ||||||||| |||||||||||||||| |||||  |||||||||||||||||    
T  44632759 gggaccaaaacgataccaaaaaattaattaagagacgaaaatagcaattaa 44632709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13463153 - 13463206
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| ||||||||||||    
T  13463153 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 13463206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 39568516 - 39568564
Alignment:
Q  4 accaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    |||||| |||||| |||||||||||||||| || |||||||||||||||    
T  39568516 accaaaacgatactaaaaaattagttaagggacaaaaatagcaattaag 39568564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 14819391 - 14819428
Alignment:
Q  17 caaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||| || |||||||||||||||||    
T  14819391 caaaaaattagttaagggactaaaatagcaattaagcc 14819428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22013957 - 22014010
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || |||||||||||| |||| |||| |||||||    
T  22013957 gggaccaaagcgataccaattaaatagttaaggaaccaaaagagcatttaagcc 22014010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 702655 - 702708
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  702655 gggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 702708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 756540 - 756487
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  756540 gggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 756487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 770954 - 771007
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  770954 gggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 771007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35060458 - 35060511
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35060458 gggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 35060511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 701686 - 701633
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  701686 gggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 701633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 769985 - 769932
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  769985 gggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 769932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16038328 - 16038275
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16038328 gggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcc 16038275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35055386 - 35055333
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35055386 gggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcc 35055333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 757504 - 757557
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  757504 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 757557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36220605 - 36220658
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  36220605 gggaccaaaacgataccaaaaaattagttaaggtactaaaatagcaattaagcc 36220658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11038630 - 11038577
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||| ||||||||||||||| ||||| || |||||||||||||||||    
T  11038630 gggaccaaagcaataccaaaaaattagctaagggactaaaatagcaattaagcc 11038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51645976 - 51646029
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||| ||||| || |||||||||||||||||    
T  51645976 gggaccaaaccgataccaaaaaattagctaagggactaaaatagcaattaagcc 51646029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16039683 - 16039734
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    |||||| || ||||||||||||||||||||||| || |||||||||||||||    
T  16039683 gggaccgaaacgataccaaaaaattagttaagggacaaaaatagcaattaag 16039734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40681506 - 40681559
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| ||||||||||||    
T  40681506 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 40681559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36219460 - 36219408
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||| ||||||  ||||||||||||||| || ||||||||||||||||    
T  36219460 gggaccaaaccgatactcaaaaattagttaagggactaaaatagcaattaagc 36219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41845554 - 41845501
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  |||||||||||| || |||| |||| |||||||    
T  41845554 gggaccaaagcgataccaattaattagttaagggaccaaaagagcatttaagcc 41845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1098401 - 1098453
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    |||||||||||||||||||  || |||||||||||| |||| |||| ||||||    
T  1098401 gggaccaaagcgataccaattaaatagttaaggaaccaaaagagcatttaagc 1098453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 11039740 - 11039788
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||| ||||||||||||||||||||   || |||||||||||||||||    
T  11039740 caaagtgataccaaaaaattagttaaatgactaaaatagcaattaagcc 11039788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 35738413 - 35738363
Alignment:
Q  4 accaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35738413 accaaagcgataccaaaaaattagttaaggaacgaaaatagtaattaagcc 35738363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36889752 - 36889805
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  36889752 gggaccaaaccgataccaaaaaattagttaagggactaaaatagcaattaagcc 36889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36888391 - 36888338
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||| ||||| || |||||||||||||||||    
T  36888391 gggaccaaaccgataccaaaaaattagctaagggactaaaatagcaattaagcc 36888338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3603557 - 3603504
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| ||| || ||||||||| ||||||||| ||||||||||    
T  3603557 gggaccaaagcgatactaaataaatagttaagggacgaaaataacaattaagcc 3603504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7184934 - 7184881
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||| |||| ||||||||||||||||||||||  || |||||||||||||||||    
T  7184934 gggatcaaaccgataccaaaaaattagttaagagactaaaatagcaattaagcc 7184881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43820333 - 43820386
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || |||||||||||| ||||||||| |||||||    
T  43820333 gggaccaaagcgataccaattaaatagttaaggaaccaaaatagcatttaagcc 43820386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 13809473 - 13809426
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||||||||||||||||||||||  | ||||||| ||||||||    
T  13809473 caaagcgataccaaaaaattagttaagggcctaaaatagaaattaagc 13809426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 3607049 - 3607098
Alignment:
Q  6 caaagcgataccaa--aaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||||| ||  ||||||| ||||||||||||||||||||||||||    
T  3607049 caaagcgatactaattaaaattaattaaggaacgaaaatagcaattaagc 3607098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40468099 - 40468049
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaa 51  Q
    |||||||||||||||||||| ||| | |||||| ||||||| |||||||||    
T  40468099 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaa 40468049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8029019 - 8028966
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||  ||| ||||||||||||||||    
T  8029019 gggaccaaagcgataccaaataataacttaagagacggaaatagcaattaagcc 8028966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19297580 - 19297527
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| ||| | |||||| ||||||| ||||||||||||    
T  19297580 gggaccaaaacgataccaaataataacttaagggacgaaaagagcaattaagcc 19297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20686682 - 20686735
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||| |||||||| ||| | |||||| ||||||| ||||||||||||    
T  20686682 gggaccaaagcaataccaaataataacttaagggacgaaaaaagcaattaagcc 20686735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 15044791 - 15044739
Alignment:
Q  2 ggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||  || ||||||||| || ||||||||| |||||||    
T  15044791 ggaccaaagcgataccaattaaatagttaagggaccaaaatagcacttaagcc 15044739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 71834 - 71887
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  71834 gggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 71887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 70722 - 70669
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  70722 gggaccaaaccgataccaaaaaattagttaagggactaaaatagcaattaagcc 70669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21709211 - 21709158
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  21709211 gggaccaaagcgatactaaaaaattagttaagggacgaaaatagcaattaagcc 21709158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26024940 - 26024888
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  26024940 gggaccaaagcgataccaaaaaataagttaagggacgaagatagcaattaagc 26024888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21710606 - 21710659
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||||| ||||    
T  21710606 gggaccaaagcgataccaaaaaataagttaagggacaaaaatatcaattcagcc 21710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40738246 - 40738193
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| ||  |||||||| ||| ||||||||||||||||||||    
T  40738246 gggaccaaagcgatactaattaattagttgagggacgaaaatagcaattaagcc 40738193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45088257 - 45088310
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||  ||||||||| |||||||||||| || |||||||||||||||||    
T  45088257 gggaccaaactgataccaaacaattagttaagggactaaaatagcaattaagcc 45088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19543543 - 19543492
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    |||| ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  19543543 gggatcaaagcgatactaaataaatagttaagggacgaaaatagcaattaag 19543492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45087118 - 45087067
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    ||||||||| ||||||||||||||||||||| | || |||||| ||||||||    
T  45087118 gggaccaaaccgataccaaaaaattagttaaaggactaaaataacaattaag 45087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30766689 - 30766742
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||| ||||||||| ||| | |||||| ||||||| ||||||||||||    
T  30766689 gggaccaaagtgataccaaataataacttaagggacgaaaaaagcaattaagcc 30766742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 10986743 - 10986695
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||| ||||||||||||| ||||||||| ||||||| || |||||||||    
T  10986743 caaaacgataccaaaaaaatagttaagggacgaaaagagaaattaagcc 10986695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 26025876 - 26025924
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||| ||||||| ||||||||||| | || |||||||||||||||||    
T  26025876 caaagcaataccaagaaattagttaaaggacaaaaatagcaattaagcc 26025924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21611968 - 21611915
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  21611968 gggaccaaatcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 21611915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21282870 - 21282817
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  21282870 gggaccaaagcgatacaaaaaaattaattaagggacgaaaatagcaattaagcc 21282817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 5660198 - 5660249
Alignment:
Q  3 gaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  5660198 gaccaaaacgataccaaaaaattagtttagggacgaaaatagcaattaagcc 5660249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29744834 - 29744781
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| |||||||||||| || |||||||||||||||||    
T  29744834 gggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagcc 29744781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29751145 - 29751198
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| |||||||||||| || |||||||||||||||||    
T  29751145 gggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagcc 29751198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5659158 - 5659106
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacg-aaaatagcaattaag 52  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  5659158 gggaccaaagtgataccaaaaaattagttaagggacgaaaaatagcaattaag 5659106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12260499 - 12260446
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| ||||||||||||    
T  12260499 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 12260446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14403741 - 14403688
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||| |||||||| ||||||| ||||| || |||||||||||||||||    
T  14403741 gggaccaaagtgataccaacaaattaggtaagggactaaaatagcaattaagcc 14403688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 29467291 - 29467343
Alignment:
Q  2 ggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||| |||| ||| || ||||||||| ||||||||||||||||||||    
T  29467291 ggaccaaagcaatactaaataaatagttaagggacgaaaatagcaattaagcc 29467343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17971852 - 17971903
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    |||||||||||||||| |  ||| ||||||||||||||||||| ||||||||    
T  17971852 gggaccaaagcgatactactaaaatagttaaggaacgaaaatatcaattaag 17971903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 21283922 - 21283961
Alignment:
Q  15 accaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  21283922 accaaaaaattagttaagggacgaaaataacaattaagcc 21283961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21612886 - 21612933
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaat 48  Q
    ||||||||| |||||||||||||||| |||||| ||||||||| ||||    
T  21612886 gggaccaaaacgataccaaaaaattaattaagggacgaaaataacaat 21612933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29465804 - 29465755
Alignment:
Q  5 ccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||| ||||| ||  |||||||||||| ||||||||||||||||||||    
T  29465804 ccaaagtgatactaattaattagttaagggacgaaaatagcaattaagcc 29465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51598014 - 51597961
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  51598014 gggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 51597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 51599443 - 51599491
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51599443 caaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 51599491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 16963433 - 16963484
Alignment:
Q  3 gaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16963433 gaccaaatcgataccaaaaaattagttaaggaacgaaaataacaattaagcc 16963484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 16962062 - 16962010
Alignment:
Q  2 ggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  16962062 ggaccaaagcaataccaaaaaattagttaagggacaaaaatagcaattaagcc 16962010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6241306 - 6241253
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  6241306 gggaccaaagcgatactaaataaatagttaaggaacgaaaatagaaattaagcc 6241253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46015862 - 46015915
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||||| |||||| || |||||| ||||||||||    
T  46015862 gggaccaaagcgataccaaaaaattacttaagggactaaaataacaattaagcc 46015915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50682592 - 50682644
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||||||||    
T  50682592 gggaccaaagcgataccaaaaaaataattaagggaccaaaatagcaattaagc 50682644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33333417 - 33333467
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaa 51  Q
    |||||||||  |||||||||||||||||||||| || ||||||||||||||    
T  33333417 gggaccaaactgataccaaaaaattagttaagggactaaaatagcaattaa 33333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15073932 - 15073985
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || |||||||||||| ||||||||| |||||||    
T  15073932 gggaccaaagcgataccaattaaatagttaaggaaccaaaatagcatttaagcc 15073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 46014747 - 46014701
Alignment:
Q  8 aagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||||||||   || |||||||||||||||||    
T  46014747 aagcgataccaaaaaattagttaaatgactaaaatagcaattaagcc 46014701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6242702 - 6242755
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||| ||  |||||||||||| | ||||||| ||||||||||    
T  6242702 gggaccaaagcgatactaattaattagttaagggatgaaaatatcaattaagcc 6242755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7964166 - 7964113
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| || ||||||||| || |||| |||| |||||||    
T  7964166 gggaccaaagcgataccaaataaatagttaagggaccaaaagagcatttaagcc 7964113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24326635 - 24326582
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| || ||||||||| || |||| |||| |||||||    
T  24326635 gggaccaaagcgataccaaataaatagttaagggaccaaaagagcatttaagcc 24326582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33332230 - 33332177
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| || ||||||||  || |||||||||||||||||    
T  33332230 gggaccaaaccgataccaaacaactagttaagagactaaaatagcaattaagcc 33332177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36143140 - 36143193
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| ||| | |||||| ||||||| ||||||||||||    
T  36143140 gggaccaaatcgataccaaataataacttaagggacgaaaagagcaattaagcc 36143193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47113119 - 47113172
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||| ||||||||||||||| ||| | |||||| ||||||| ||||||||||||    
T  47113119 gggatcaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 47113172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32194000 - 32194052
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    |||||||||||||||||||  || |||||||||||| |||| |||| ||||||    
T  32194000 gggaccaaagcgataccaattaaatagttaaggaaccaaaagagcatttaagc 32194052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 123477 - 123424
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  123477 gggaccaaagcaataccaagaaattagttaagggacgaaaatagcaattaagcc 123424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 134353 - 134300
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  134353 gggaccaaagcaataccaagaaattagttaagggacgaaaatagcaattaagcc 134300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 129424 - 129477
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||    
T  129424 gggaccaaagtgataccaaaaaataagttaagggacgaaaataacaattaagcc 129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 21815958 - 21815909
Alignment:
Q  4 accaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  21815958 accaaagcgatactaaaaaattagttaagggacgaaaatagcaattaagc 21815909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21817405 - 21817457
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagc 53  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  21817405 gggaccaaagcgataccaaaaaattagttaagggatgaaaatagtaattaagc 21817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20184501 - 20184448
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||||||||||||| || |||||| ||||||||||    
T  20184501 gggaccaaaccgataccaaaaaattagttaagggactaaaataacaattaagcc 20184448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27688539 - 27688486
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| |||||||||||| || |||||||||||||||||    
T  27688539 gggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagcc 27688486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27695580 - 27695633
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| |||||||||| |||||||||||| || |||||||||||||||||    
T  27695580 gggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagcc 27695633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32304285 - 32304232
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| ||||||||||||    
T  32304285 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 32304232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39992499 - 39992552
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||| |||| |||||||||||||||||||||| || ||||||| |||||||||    
T  39992499 gggacaaaagtgataccaaaaaattagttaagggactaaaatagtaattaagcc 39992552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39991558 - 39991507
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaag 52  Q
    |||| |||| ||||| |||||||||||||||||||| |||||| ||||||||    
T  39991558 gggatcaaaacgatatcaaaaaattagttaaggaactaaaataacaattaag 39991507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 14859141 - 14859191
Alignment:
Q  4 accaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||| |||||| || |||||| | ||||||||||||||||||    
T  14859141 accaaagcgatactaaaaaaatatttaagggaagaaaatagcaattaagcc 14859191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17509517 - 17509464
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| | ||||||||||    
T  17509517 gggaccaaagcgataccaaataataacttaagggacgaaaagaacaattaagcc 17509464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40503737 - 40503790
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || ||||||||| || |||| ||||||||||||    
T  40503737 gggaccaaagcgataccaattaaatagttaagggaccaaaagagcaattaagcc 40503790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42540216 - 42540163
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||| ||| | |||||| ||||||| || |||||||||    
T  42540216 gggaccaaagcgataccaaataataacttaagggacgaaaagagtaattaagcc 42540163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45940685 - 45940738
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || ||||||||| || ||||||||| |||||||    
T  45940685 gggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcc 45940738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 49221550 - 49221510
Alignment:
Q  11 cgataccaaaaaattagttaaggaacgaaaatagcaattaa 51  Q
    ||||||||||||||||||||||| || |||||| |||||||    
T  49221550 cgataccaaaaaattagttaagggacaaaaataacaattaa 49221510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19718900 - 19718948
Alignment:
Q  6 caaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||    
T  19718900 caaagcgataccaaaaaattagttaaaggactaaaatagcaattaagcc 19718948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4959614 - 4959561
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || ||||||||| || ||||||||| |||||||    
T  4959614 gggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcc 4959561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16669559 - 16669506
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || |||||||||||| |||| |||| |||||||    
T  16669559 gggaccaaagcgataccaattaaatagttaaggaaccaaaagagcatttaagcc 16669506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 25333194 - 25333246
Alignment:
Q  2 ggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||||||||||||  || ||||||||| || ||||||||| |||||||    
T  25333194 ggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcc 25333246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14324 - 14270
Alignment:
Q  1 gggaccaaagcgataccaaaaaa-ttagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||||||||||| |||||||||| || |||||||||||||||||    
T  14324 gggaccaaaccgataccaaaaaaattagttaagggactaaaatagcaattaagcc 14270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19250 - 19303
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    ||||||||| ||||| |||||||||||||||||||| ||| || ||||||||||    
T  19250 gggaccaaaccgatatcaaaaaattagttaaggaactaaagtaacaattaagcc 19303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 83391 - 83444
Alignment:
Q  1 gggaccaaagcgataccaaaaaattagttaaggaacgaaaatagcaattaagcc 54  Q
    |||||||||||||||||||  || ||||||||| || ||||||||| |||||||    
T  83391 gggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcc 83444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University