View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21656_high_43 (Length: 289)

Name: NF21656_high_43
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21656_high_43
NF21656_high_43
[»] chr1 (8 HSPs)
chr1 (60-262)||(35235448-35235650)
chr1 (60-164)||(29287073-29287177)
chr1 (1-59)||(25878840-25878898)
chr1 (1-60)||(30936700-30936759)
chr1 (211-274)||(29287174-29287239)
chr1 (5-43)||(33372305-33372343)
chr1 (124-207)||(29284917-29284998)
chr1 (5-59)||(28007618-28007672)
[»] chr2 (6 HSPs)
chr2 (88-207)||(25999925-26000044)
chr2 (1-59)||(30870129-30870187)
chr2 (2-59)||(34214515-34214572)
chr2 (5-39)||(8907826-8907860)
chr2 (205-260)||(21712840-21712895)
chr2 (9-44)||(29454522-29454557)
[»] chr8 (7 HSPs)
chr8 (1-59)||(15075275-15075333)
chr8 (5-59)||(2751468-2751522)
chr8 (1-59)||(4975644-4975702)
chr8 (5-59)||(20990976-20991030)
chr8 (206-260)||(5478799-5478853)
chr8 (4-40)||(25689048-25689084)
chr8 (3-55)||(38758547-38758599)
[»] chr3 (5 HSPs)
chr3 (1-59)||(22604508-22604566)
chr3 (5-44)||(50093690-50093729)
chr3 (5-44)||(54378432-54378471)
chr3 (5-59)||(11559890-11559944)
chr3 (5-59)||(11569159-11569213)
[»] chr4 (4 HSPs)
chr4 (5-60)||(22433592-22433647)
chr4 (2-59)||(9591530-9591587)
chr4 (206-260)||(46449866-46449920)
chr4 (207-260)||(8569176-8569229)
[»] chr5 (7 HSPs)
chr5 (5-61)||(41249477-41249533)
chr5 (1-44)||(7032952-7032995)
chr5 (5-44)||(29069529-29069568)
chr5 (1-59)||(26708317-26708375)
chr5 (1-59)||(26978051-26978109)
chr5 (1-52)||(25860227-25860278)
chr5 (205-260)||(39897154-39897209)
[»] chr7 (2 HSPs)
chr7 (2-56)||(42594573-42594627)
chr7 (2-59)||(23429166-23429223)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 60 - 262
Target Start/End: Original strand, 35235448 - 35235650
Alignment:
Q  60 ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  35235448 ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctacggaaagctttgttgaaaagcattcttgtttgaaacttagaaacaaatagg 35235547  T
Q  160 aacaatgccaagaaagctacaggcgcgaagagatgcaagcccattattgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatat 259  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | | |||||    
T  35235548 aacaataccaagaaagctacaggcgcgaagagatgcaagcccattattgtcacaaataatgctttgatgtctttctcattgttattccttatatatatat 35235647  T
Q  260 ata 262  Q
    |||    
T  35235648 ata 35235650  T

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Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 29287073 - 29287177
Alignment:
Q  60 ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg 159  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29287073 ggcgcgatcccttctctaaccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg 29287172  T
Q  160 aacaa 164  Q
    |||||    
T  29287173 aacaa 29287177  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25878840 - 25878898
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25878840 acaagtggaggcaagtggggtcgcttgaccccattgctcccacattgtatccgtgcctg 25878898  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30936759 - 30936700
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctgg 60  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||    
T  30936759 acaagtggaggcaagtggggtcggttgactccattgcccccacattggatccgtgtctgg 30936700  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 29287174 - 29287239
Alignment:
Q  211 acaaataatgctttcatgtcttcctcattgttattcctt--gtgtgtatatatagatagaggttac 274  Q
    ||||||| |||||| ||||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  29287174 acaaatattgctttgatgtcttcctcattgttattccttgcgtgtgtgtgtatagatagaggttac 29287239  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33372343 - 33372305
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccac 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33372343 gtggaggcaagtggggtcgcttgaccccattgcccccac 33372305  T

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Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 29284917 - 29284998
Alignment:
Q  124 aaaagcattcttgtttgaaacttagaaacaaataggaacaatgccaagaaagctacaggcgcgaagagatgcaagcccattatt 207  Q
    |||||||||||||||||||||| |  ||||||| ||||| ||||||||||||| || || | ||||||| ||||||| ||||||    
T  29284917 aaaagcattcttgtttgaaactca--aacaaatcggaaccatgccaagaaagcaactggtgtgaagagaagcaagcctattatt 29284998  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 28007618 - 28007672
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||||||||||||||| ||||||| |||||||||||||| |  |||||||||||    
T  28007618 gtggaggcaagtggggtggcttgactccattgcccccacactagatccgtgcctg 28007672  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 25999925 - 26000044
Alignment:
Q  88 cgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaataggaacaatgccaagaaagctacaggcgcga 187  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||  ||||||||| | ||| |||||||||||||||| || | ||    
T  25999925 cgagaaatttgtaaacctctactgaaagcttggttgaaaagcattcttgtttgaaactctgaaacaaatggaaaccatgccaagaaagctactggtgtga 26000024  T
Q  188 agagatgcaagcccattatt 207  Q
    ||||  ||||||||||||||    
T  26000025 agagtagcaagcccattatt 26000044  T

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Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30870187 - 30870129
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30870187 acaagtgaaggcaagtggggtcacttgaccccattgcccccacattgtatccgtgcctg 30870129  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 34214515 - 34214572
Alignment:
Q  2 caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||| ||||    
T  34214515 caagtggaggcaagtggggtcggttgaccccattgcccccacactgcatccgtccctg 34214572  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 8907860 - 8907826
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgccc 39  Q
    |||||||||||||||||||||||||||||||||||    
T  8907860 gtggaggcaagtggggtcgcttgaccccattgccc 8907826  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 21712895 - 21712840
Alignment:
Q  205 attgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata 260  Q
    ||||||||||||||||  || ||| ||| |||||||||||||||||||| ||||||    
T  21712895 attgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata 21712840  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 29454522 - 29454557
Alignment:
Q  9 aggcaagtggggtcgcttgaccccattgcccccaca 44  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29454522 aggcaagtggggtcgcttgaccccattgctcccaca 29454557  T

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Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15075333 - 15075275
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15075333 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 15075275  T

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Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 2751522 - 2751468
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2751522 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccatgcctg 2751468  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4975644 - 4975702
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4975644 acaagtggatacaagtggggtcgcttgaccccattgcccccatattgtatccgtgcctg 4975702  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 20990976 - 20991030
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||||||||| ||||||||||| |  |||||||||||    
T  20990976 gtggaggcaagtggggtcgcttgaccccgttgcccccacactagatccgtgcctg 20991030  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 5478799 - 5478853
Alignment:
Q  206 ttgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata 260  Q
    |||||||||||||||  || ||| ||| |||||||||||||||||||| ||||||    
T  5478799 ttgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata 5478853  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 25689084 - 25689048
Alignment:
Q  4 agtggaggcaagtggggtcgcttgaccccattgcccc 40  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  25689084 agtggaggcaagtggggtcggttgactccattgcccc 25689048  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 38758599 - 38758547
Alignment:
Q  3 aagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtg 55  Q
    |||||||||||| ||| |||| ||||||||||| | ||||||||| |||||||    
T  38758599 aagtggaggcaaatggagtcggttgaccccattactcccacattggatccgtg 38758547  T

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Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22604508 - 22604566
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22604508 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtattcgtgcctg 22604566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 50093690 - 50093729
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccaca 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50093690 gtggaggcaagtggggtcgcttgaccccattgcccccaca 50093729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 54378432 - 54378471
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccaca 44  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  54378432 gtggaggcaagtggggtcgcttgaccccattgtccccaca 54378471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11559890 - 11559944
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||||| ||||||||||||||||||| ||||||| |||| |  |||||||||||    
T  11559890 gtggaggtaagtggggtcgcttgacccgattgcccacacactagatccgtgcctg 11559944  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11569159 - 11569213
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||||| ||||||||||||||||||| ||||||| |||| |  |||||||||||    
T  11569159 gtggaggtaagtggggtcgcttgacccgattgcccacacactagatccgtgcctg 11569213  T

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Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 22433647 - 22433592
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctgg 60  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22433647 gtggaggcaagtggggtcgcttgaccccattgcccccacatggtatccgtgcctgg 22433592  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 9591587 - 9591530
Alignment:
Q  2 caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||| | |||||||||||||||||||| | ||||| ||||||    
T  9591587 caagtggaggcaagtggggttggttgaccccattgcccccacactctatccatgcctg 9591530  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 46449866 - 46449920
Alignment:
Q  206 ttgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata 260  Q
    |||||||||||||||  || ||| ||| |||||||||||||||||||| ||||||    
T  46449866 ttgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata 46449920  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 8569176 - 8569229
Alignment:
Q  207 tgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata 260  Q
    ||||||||||||||  || ||| ||| |||||||||||||||||||| ||||||    
T  8569176 tgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata 8569229  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41249533 - 41249477
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctggg 61  Q
    |||||||||||||||||| ||||||||||||| |||||||||  |||||||||||||    
T  41249533 gtggaggcaagtggggtcacttgaccccattgtccccacattagatccgtgcctggg 41249477  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7032952 - 7032995
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  7032952 acaagtggaggcaagtggggtcggttgaccccattgcccccaca 7032995  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 29069529 - 29069568
Alignment:
Q  5 gtggaggcaagtggggtcgcttgaccccattgcccccaca 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29069529 gtggaggcaagtggggtcgcttgaccccattgcccccaca 29069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26708375 - 26708317
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  26708375 acaagaggaggcaagtggggtcacttgaccccattgccctcacattgattccgtgcctg 26708317  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26978109 - 26978051
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  26978109 acaagaggaggcaagtggggtcacttgaccccattgccctcacattgattccgtgcctg 26978051  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25860227 - 25860278
Alignment:
Q  1 acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatcc 52  Q
    ||||||||||| |||||| |||| ||||||||||||||||||| ||| ||||    
T  25860227 acaagtggagggaagtggagtcggttgaccccattgcccccactttggatcc 25860278  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 39897154 - 39897209
Alignment:
Q  205 attgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata 260  Q
    ||||||||||||||||  || ||| ||| |||||||||||||||||||| ||||||    
T  39897154 attgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata 39897209  T

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Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 42594573 - 42594627
Alignment:
Q  2 caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgc 56  Q
    |||||||||||||||||||||| |||||||||||||| |||||||| ||| ||||    
T  42594573 caagtggaggcaagtggggtcggttgaccccattgccaccacattggatctgtgc 42594627  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 23429166 - 23429223
Alignment:
Q  2 caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg 59  Q
    |||||||||||||||||||||| |||||||| ||||||||||| || |||||| ||||    
T  23429166 caagtggaggcaagtggggtcggttgaccccgttgcccccacactgcatccgtccctg 23429223  T

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