View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21656_high_53 (Length: 249)
Name: NF21656_high_53
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21656_high_53 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 16293995 - 16293757
Alignment:
| Q |
13 |
aatataaatgttctaaaagaatacttttgaacagcacacaatcattattttttccgagtctgtacttgtgaactcgtgtcacgggtggagaatttgtttt |
112 |
Q |
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| T |
16293995 |
aatataaatgttctaaaagaatacttttgaacagcacacaatcattattttttctgagtctgtatttgtgaactcgtgtcacgggtggagaatttgtttt |
16293896 |
T |
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| Q |
113 |
ccatagtcatttgtttgtggtttcatgcattgttttttggtgatatgcaaacacttgagcattaaaacaaagtagtgacgaagtgattttagaaactcaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
16293895 |
ccatagtcatttgtttgtggtttcatgcattgttttttggtgatatgcaaacacttgagcattaaaacaaagtagtgaggaagtgattttagaaactcaa |
16293796 |
T |
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| Q |
213 |
ttgtaaac--aatctctggtataagtaaacatccaaaat |
249 |
Q |
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| T |
16293795 |
ttgtaaacaaaatctttggtataagtaaacatccaaaat |
16293757 |
T |
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