View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21656_low_25 (Length: 405)

Name: NF21656_low_25
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21656_low_25
NF21656_low_25
[»] chr7 (60 HSPs)
chr7 (2-346)||(30127464-30127811)
chr7 (17-173)||(21724363-21724522)
chr7 (1-131)||(18670139-18670269)
chr7 (1-131)||(30128623-30128753)
chr7 (1-131)||(5457183-5457313)
chr7 (2-131)||(43123198-43123327)
chr7 (2-131)||(20426606-20426735)
chr7 (1-121)||(10935816-10935936)
chr7 (1-53)||(27992062-27992114)
chr7 (1-61)||(28469354-28469414)
chr7 (1-53)||(32298799-32298851)
chr7 (1-53)||(48788825-48788877)
chr7 (1-54)||(37657190-37657243)
chr7 (1-118)||(45010893-45011010)
chr7 (1-53)||(6253794-6253846)
chr7 (1-61)||(6571035-6571095)
chr7 (1-53)||(13386101-13386153)
chr7 (1-53)||(17885650-17885702)
chr7 (1-53)||(24389139-24389191)
chr7 (1-53)||(42362472-42362524)
chr7 (1-56)||(6253493-6253548)
chr7 (1-56)||(17102042-17102097)
chr7 (1-56)||(40379791-40379846)
chr7 (361-403)||(30127840-30127882)
chr7 (4-53)||(2640203-2640252)
chr7 (6-83)||(5455854-5455931)
chr7 (21-122)||(15714437-15714538)
chr7 (2-83)||(18855978-18856059)
chr7 (1-53)||(10936148-10936200)
chr7 (1-61)||(16803991-16804051)
chr7 (1-53)||(17102343-17102395)
chr7 (5-61)||(19204515-19204571)
chr7 (1-61)||(22871623-22871683)
chr7 (1-61)||(32299051-32299111)
chr7 (1-53)||(42019619-42019671)
chr7 (1-48)||(27396954-27397001)
chr7 (1-56)||(42731441-42731496)
chr7 (1-119)||(17886778-17886896)
chr7 (1-67)||(23608830-23608896)
chr7 (5-83)||(32687423-32687501)
chr7 (134-175)||(20425642-20425683)
chr7 (70-131)||(20567276-20567336)
chr7 (1-53)||(18086311-18086363)
chr7 (1-53)||(18087692-18087744)
chr7 (2-106)||(23608961-23609065)
chr7 (1-61)||(24388841-24388901)
chr7 (5-53)||(27396655-27396703)
chr7 (1-53)||(28469032-28469084)
chr7 (1-53)||(40380038-40380090)
chr7 (2-53)||(3914492-3914542)
chr7 (1-56)||(27991761-27991816)
chr7 (2-60)||(7354885-7354943)
chr7 (2-48)||(18855433-18855479)
chr7 (1-50)||(28105523-28105572)
chr7 (1-61)||(23181340-23181400)
chr7 (4-56)||(32053494-32053546)
chr7 (13-53)||(33808357-33808397)
chr7 (5-53)||(42731773-42731821)
chr7 (1-53)||(47945379-47945431)
chr7 (1-53)||(47950809-47950861)
[»] chr6 (34 HSPs)
chr6 (2-200)||(13378548-13378746)
chr6 (2-200)||(26464405-26464604)
chr6 (1-195)||(15116445-15116638)
chr6 (1-159)||(8090175-8090333)
chr6 (4-200)||(12408377-12408574)
chr6 (2-126)||(26463202-26463326)
chr6 (2-131)||(28498301-28498430)
chr6 (2-131)||(29810712-29810841)
chr6 (1-53)||(3059610-3059662)
chr6 (1-53)||(30726113-30726165)
chr6 (1-53)||(33517888-33517940)
chr6 (1-53)||(33647305-33647357)
chr6 (1-116)||(30337471-30337586)
chr6 (1-131)||(681004-681134)
chr6 (4-129)||(12407533-12407658)
chr6 (2-53)||(8089466-8089517)
chr6 (2-53)||(13379836-13379887)
chr6 (1-53)||(679888-679940)
chr6 (5-53)||(11393158-11393206)
chr6 (1-53)||(12080990-12081042)
chr6 (1-121)||(21627999-21628119)
chr6 (1-53)||(30337772-30337824)
chr6 (1-53)||(30804215-30804267)
chr6 (2-53)||(20651033-20651084)
chr6 (1-83)||(15115361-15115443)
chr6 (1-53)||(11434824-11434876)
chr6 (5-61)||(33517560-33517616)
chr6 (2-89)||(1215030-1215117)
chr6 (1-56)||(12080658-12080713)
chr6 (2-53)||(20652001-20652052)
chr6 (1-61)||(3059279-3059339)
chr6 (1-61)||(7905265-7905325)
chr6 (1-53)||(17734218-17734270)
chr6 (1-57)||(31406900-31406956)
[»] chr5 (66 HSPs)
chr5 (5-200)||(30096748-30096944)
chr5 (2-129)||(40148921-40149048)
chr5 (2-53)||(37991222-37991273)
chr5 (1-53)||(6301897-6301949)
chr5 (1-53)||(8322758-8322810)
chr5 (1-53)||(11762071-11762123)
chr5 (1-53)||(14194445-14194497)
chr5 (8-131)||(14848982-14849106)
chr5 (1-53)||(19892330-19892382)
chr5 (1-53)||(28770891-28770943)
chr5 (1-121)||(40150100-40150220)
chr5 (1-56)||(3529193-3529248)
chr5 (2-53)||(42265758-42265809)
chr5 (8-121)||(12904783-12904896)
chr5 (1-53)||(3528895-3528947)
chr5 (1-53)||(16156877-16156929)
chr5 (1-53)||(17202753-17202805)
chr5 (1-61)||(20840555-20840615)
chr5 (1-53)||(27587469-27587521)
chr5 (1-53)||(28269444-28269496)
chr5 (1-53)||(35512468-35512520)
chr5 (1-56)||(11761771-11761826)
chr5 (1-56)||(27587170-27587225)
chr5 (5-90)||(5835649-5835734)
chr5 (1-61)||(5993911-5993971)
chr5 (1-53)||(6150774-6150826)
chr5 (1-61)||(16157201-16157261)
chr5 (1-53)||(18247430-18247482)
chr5 (1-121)||(19892594-19892714)
chr5 (1-53)||(24547199-24547251)
chr5 (1-61)||(35512170-35512230)
chr5 (1-53)||(38442421-38442473)
chr5 (1-61)||(38475345-38475405)
chr5 (1-61)||(39453322-39453382)
chr5 (1-53)||(39453653-39453705)
chr5 (2-61)||(5326080-5326139)
chr5 (1-56)||(20814486-20814541)
chr5 (2-53)||(21257515-21257566)
chr5 (3-48)||(35920543-35920588)
chr5 (1-53)||(186773-186825)
chr5 (1-53)||(5024041-5024093)
chr5 (1-53)||(5994243-5994295)
chr5 (1-53)||(11740709-11740761)
chr5 (1-61)||(13362574-13362634)
chr5 (1-61)||(13962886-13962946)
chr5 (5-53)||(13963183-13963231)
chr5 (2-90)||(14848762-14848850)
chr5 (1-61)||(24547471-24547531)
chr5 (5-53)||(29646388-29646436)
chr5 (2-134)||(42067794-42067929)
chr5 (1-49)||(43159172-43159220)
chr5 (3-53)||(21265167-21265217)
chr5 (12-53)||(6301576-6301617)
chr5 (1-54)||(8875618-8875671)
chr5 (11-120)||(15644999-15645108)
chr5 (4-61)||(16083002-16083059)
chr5 (4-61)||(17202424-17202481)
chr5 (1-46)||(18670224-18670269)
chr5 (2-83)||(24141475-24141556)
chr5 (1-53)||(5835780-5835832)
chr5 (1-61)||(17544392-17544452)
chr5 (1-45)||(18247108-18247152)
chr5 (1-53)||(19517961-19518013)
chr5 (1-121)||(32242264-32242384)
chr5 (1-53)||(32242596-32242647)
chr5 (5-53)||(35920254-35920302)
[»] chr2 (52 HSPs)
chr2 (2-218)||(43741865-43742081)
chr2 (143-196)||(3556181-3556234)
chr2 (2-119)||(44045290-44045407)
chr2 (1-53)||(13692574-13692626)
chr2 (11-90)||(11689755-11689834)
chr2 (2-53)||(25230125-25230176)
chr2 (1-134)||(15848110-15848243)
chr2 (1-53)||(6588705-6588757)
chr2 (1-53)||(6658201-6658253)
chr2 (1-53)||(9076421-9076473)
chr2 (8-84)||(11721222-11721298)
chr2 (1-53)||(16099378-16099430)
chr2 (1-53)||(34448149-34448201)
chr2 (1-53)||(37895369-37895421)
chr2 (1-56)||(11163374-11163429)
chr2 (5-56)||(39498336-39498387)
chr2 (2-83)||(25231172-25231253)
chr2 (1-49)||(3555272-3555320)
chr2 (1-53)||(3556363-3556415)
chr2 (1-53)||(11163076-11163128)
chr2 (1-61)||(30729643-30729703)
chr2 (1-53)||(36382481-36382533)
chr2 (1-53)||(36480072-36480124)
chr2 (1-53)||(36755442-36755494)
chr2 (1-53)||(39423869-39423921)
chr2 (1-53)||(39498633-39498685)
chr2 (8-83)||(16105581-16105656)
chr2 (20-83)||(17266654-17266717)
chr2 (1-56)||(45556134-45556189)
chr2 (8-126)||(11689570-11689688)
chr2 (5-83)||(28230063-28230141)
chr2 (70-131)||(11349481-11349542)
chr2 (1-49)||(6307076-6307124)
chr2 (1-53)||(10713077-10713129)
chr2 (2-46)||(28228693-28228737)
chr2 (1-121)||(37895633-37895753)
chr2 (2-50)||(44044137-44044185)
chr2 (1-61)||(44714107-44714167)
chr2 (5-53)||(45556401-45556449)
chr2 (1-56)||(14900801-14900856)
chr2 (1-56)||(16099077-16099132)
chr2 (8-126)||(11721371-11721489)
chr2 (1-51)||(15848444-15848494)
chr2 (8-90)||(17266427-17266509)
chr2 (12-53)||(21370556-21370597)
chr2 (1-46)||(36479740-36479785)
chr2 (1-61)||(10712745-10712805)
chr2 (1-61)||(15604361-15604421)
chr2 (1-61)||(15604683-15604743)
chr2 (1-61)||(28226088-28226148)
chr2 (1-61)||(36382183-36382243)
chr2 (5-53)||(44713821-44713869)
[»] scaffold0182 (2 HSPs)
scaffold0182 (17-173)||(33001-33160)
scaffold0182 (33-131)||(31678-31776)
[»] chr3 (52 HSPs)
chr3 (65-218)||(26718636-26718789)
chr3 (225-294)||(26718521-26718593)
chr3 (2-129)||(33154900-33155027)
chr3 (2-131)||(25107236-25107365)
chr3 (2-53)||(3849054-3849105)
chr3 (4-53)||(9367766-9367815)
chr3 (2-50)||(3850484-3850532)
chr3 (1-53)||(9368655-9368707)
chr3 (1-53)||(23458001-23458053)
chr3 (8-120)||(26479212-26479324)
chr3 (5-53)||(36417714-36417762)
chr3 (2-131)||(25108371-25108500)
chr3 (2-83)||(26479093-26479174)
chr3 (1-54)||(51993986-51994039)
chr3 (1-61)||(2796201-2796261)
chr3 (1-61)||(9294304-9294364)
chr3 (1-61)||(19741238-19741298)
chr3 (1-61)||(23458325-23458385)
chr3 (1-45)||(34142580-34142624)
chr3 (5-53)||(36418042-36418090)
chr3 (2-53)||(1079575-1079626)
chr3 (2-53)||(19740946-19740997)
chr3 (5-131)||(21783426-21783550)
chr3 (8-87)||(30381064-30381143)
chr3 (17-91)||(14633890-14633964)
chr3 (1-78)||(14634081-14634158)
chr3 (3-52)||(21783850-21783899)
chr3 (143-196)||(33155080-33155133)
chr3 (1-54)||(35712066-35712119)
chr3 (5-54)||(55052318-55052367)
chr3 (2-46)||(1078560-1078604)
chr3 (1-53)||(26463654-26463706)
chr3 (1-61)||(33689725-33689785)
chr3 (1-53)||(40758464-40758516)
chr3 (1-53)||(53757077-53757129)
chr3 (1-48)||(36150549-36150596)
chr3 (1-56)||(36314618-36314673)
chr3 (1-48)||(40758169-40758216)
chr3 (1-52)||(41558030-41558081)
chr3 (2-53)||(41558236-41558287)
chr3 (2-53)||(43607803-43607854)
chr3 (1-56)||(46474837-46474892)
chr3 (1-56)||(48322697-48322752)
chr3 (2-108)||(23276282-23276388)
chr3 (1-131)||(33156270-33156400)
chr3 (2-83)||(21186019-21186100)
chr3 (1-54)||(40033541-40033594)
chr3 (1-53)||(33689404-33689455)
chr3 (1-53)||(42855659-42855711)
chr3 (1-53)||(43384637-43384689)
chr3 (20-108)||(54896069-54896157)
chr3 (70-122)||(54896202-54896254)
[»] chr4 (71 HSPs)
chr4 (2-126)||(11857915-11858039)
chr4 (2-125)||(55866134-55866255)
chr4 (1-53)||(24349696-24349748)
chr4 (1-53)||(50418690-50418742)
chr4 (1-53)||(51692873-51692925)
chr4 (2-53)||(148109-148160)
chr4 (1-56)||(7451856-7451911)
chr4 (2-121)||(41582470-41582589)
chr4 (8-122)||(7280238-7280352)
chr4 (4-53)||(147344-147393)
chr4 (1-53)||(1179154-1179206)
chr4 (1-53)||(7452157-7452209)
chr4 (1-53)||(10781838-10781890)
chr4 (1-53)||(13058336-13058388)
chr4 (1-53)||(18831671-18831723)
chr4 (1-53)||(23613632-23613684)
chr4 (1-53)||(24350786-24350838)
chr4 (1-53)||(35028020-35028072)
chr4 (1-61)||(37248258-37248318)
chr4 (1-53)||(37248559-37248611)
chr4 (1-53)||(43155551-43155603)
chr4 (1-53)||(48528507-48528559)
chr4 (1-56)||(24711133-24711188)
chr4 (17-129)||(29320067-29320181)
chr4 (5-56)||(43155847-43155898)
chr4 (2-53)||(55867468-55867519)
chr4 (8-53)||(5369221-5369266)
chr4 (2-90)||(11858106-11858195)
chr4 (1-54)||(16006146-16006199)
chr4 (2-83)||(40387490-40387571)
chr4 (1-53)||(10780735-10780787)
chr4 (1-53)||(10974344-10974396)
chr4 (1-53)||(15507695-15507747)
chr4 (1-53)||(24411702-24411754)
chr4 (1-53)||(24711434-24711486)
chr4 (1-121)||(35028284-35028404)
chr4 (1-49)||(44967091-44967139)
chr4 (1-53)||(49879229-49879281)
chr4 (1-49)||(54086717-54086765)
chr4 (1-56)||(44967389-44967444)
chr4 (5-115)||(11448021-11448131)
chr4 (4-61)||(18831374-18831431)
chr4 (1-38)||(46661283-46661320)
chr4 (1-54)||(50418990-50419043)
chr4 (5-46)||(54087056-54087097)
chr4 (1-53)||(11108194-11108246)
chr4 (4-56)||(17356273-17356325)
chr4 (1-53)||(34765402-34765454)
chr4 (1-121)||(34765666-34765786)
chr4 (5-53)||(36008870-36008918)
chr4 (1-53)||(37976175-37976227)
chr4 (1-56)||(5368969-5369024)
chr4 (1-56)||(9400839-9400894)
chr4 (1-48)||(13058059-13058106)
chr4 (1-56)||(23613331-23613386)
chr4 (1-56)||(27934554-27934609)
chr4 (2-121)||(40388392-40388511)
chr4 (1-131)||(16605624-16605754)
chr4 (10-48)||(36009172-36009210)
chr4 (2-120)||(41583518-41583636)
chr4 (2-83)||(32063660-32063741)
chr4 (1-62)||(53129851-53129912)
chr4 (32-125)||(56014778-56014871)
chr4 (1-61)||(10408233-10408293)
chr4 (1-53)||(17355947-17355999)
chr4 (1-121)||(29321191-29321311)
chr4 (1-53)||(39539272-39539324)
chr4 (1-61)||(49879522-49879582)
chr4 (1-61)||(52909275-52909335)
chr4 (1-53)||(54435451-54435503)
chr4 (1-61)||(54858904-54858964)
[»] chr1 (68 HSPs)
chr1 (1-141)||(13300170-13300310)
chr1 (1-131)||(34850341-34850471)
chr1 (12-123)||(42267484-42267595)
chr1 (2-129)||(44522170-44522297)
chr1 (8-122)||(22103638-22103752)
chr1 (1-131)||(9443594-9443725)
chr1 (118-200)||(31198129-31198212)
chr1 (1-128)||(34849033-34849160)
chr1 (1-121)||(6367584-6367704)
chr1 (1-53)||(37578214-37578266)
chr1 (1-56)||(25647906-25647961)
chr1 (4-53)||(183246-183295)
chr1 (2-83)||(10304179-10304260)
chr1 (1-58)||(40435367-40435424)
chr1 (1-54)||(42533046-42533099)
chr1 (1-121)||(4960562-4960682)
chr1 (1-53)||(6367916-6367968)
chr1 (1-53)||(26024746-26024798)
chr1 (1-53)||(30711681-30711733)
chr1 (1-53)||(32917614-32917666)
chr1 (1-53)||(43759176-43759228)
chr1 (1-53)||(47999145-47999197)
chr1 (1-53)||(48691170-48691222)
chr1 (1-53)||(49723080-49723132)
chr1 (11-122)||(19227144-19227255)
chr1 (8-126)||(22103787-22103905)
chr1 (2-83)||(10303946-10304027)
chr1 (17-106)||(13246048-13246137)
chr1 (1-54)||(35152683-35152736)
chr1 (1-54)||(40772812-40772865)
chr1 (1-53)||(1103815-1103867)
chr1 (1-53)||(13914090-13914142)
chr1 (1-53)||(17661874-17661925)
chr1 (1-121)||(17662136-17662256)
chr1 (1-61)||(23209673-23209733)
chr1 (1-61)||(26024445-26024505)
chr1 (1-121)||(34464471-34464591)
chr1 (1-53)||(35473653-35473705)
chr1 (1-53)||(36694304-36694356)
chr1 (1-53)||(36710405-36710457)
chr1 (2-126)||(42267326-42267450)
chr1 (2-53)||(46899084-46899135)
chr1 (3-53)||(4960863-4960913)
chr1 (1-51)||(24009597-24009647)
chr1 (17-126)||(13245888-13245997)
chr1 (8-53)||(17691248-17691293)
chr1 (4-53)||(41099087-41099136)
chr1 (9-53)||(1841812-1841856)
chr1 (1-53)||(14879312-14879364)
chr1 (1-53)||(17692539-17692591)
chr1 (1-61)||(19017975-19018035)
chr1 (1-121)||(34464735-34464855)
chr1 (1-121)||(37578478-37578598)
chr1 (1-61)||(40714466-40714526)
chr1 (1-61)||(41098755-41098815)
chr1 (1-48)||(40772529-40772576)
chr1 (5-56)||(47999443-47999494)
chr1 (10-56)||(183542-183588)
chr1 (2-48)||(31197088-31197134)
chr1 (1-90)||(24905189-24905278)
chr1 (1-53)||(5734032-5734083)
chr1 (1-61)||(7820976-7821036)
chr1 (1-61)||(14878993-14879053)
chr1 (1-61)||(17188976-17189036)
chr1 (1-45)||(19515841-19515885)
chr1 (1-53)||(40210392-40210444)
chr1 (1-121)||(40210656-40210776)
chr1 (5-61)||(46163056-46163112)
[»] chr8 (50 HSPs)
chr8 (70-174)||(30459462-30459566)
chr8 (1-131)||(20385590-20385720)
chr8 (1-131)||(20386706-20386836)
chr8 (1-50)||(23663567-23663616)
chr8 (1-53)||(8316675-8316727)
chr8 (2-83)||(2535874-2535955)
chr8 (2-83)||(31873223-31873304)
chr8 (1-50)||(38956029-38956078)
chr8 (1-53)||(1425075-1425127)
chr8 (5-121)||(4405946-4406062)
chr8 (1-121)||(9337048-9337168)
chr8 (1-61)||(31608859-31608919)
chr8 (1-53)||(38862917-38862969)
chr8 (1-47)||(12273213-12273259)
chr8 (1-53)||(35756936-35756989)
chr8 (1-61)||(8316934-8316994)
chr8 (1-104)||(10749813-10749914)
chr8 (1-53)||(12198972-12199024)
chr8 (1-53)||(12443400-12443452)
chr8 (1-53)||(13186413-13186465)
chr8 (1-61)||(23663860-23663920)
chr8 (5-61)||(23698590-23698646)
chr8 (1-53)||(33357520-33357572)
chr8 (1-61)||(39071698-39071758)
chr8 (1-53)||(40317986-40318038)
chr8 (8-83)||(20050112-20050187)
chr8 (17-119)||(13084775-13084877)
chr8 (17-136)||(9499645-9499763)
chr8 (5-50)||(34177327-34177372)
chr8 (1-53)||(7295281-7295333)
chr8 (1-53)||(12272940-12272992)
chr8 (1-61)||(34061674-34061734)
chr8 (5-53)||(36186127-36186175)
chr8 (4-56)||(36325259-36325311)
chr8 (1-53)||(39071996-39072047)
chr8 (5-48)||(9065691-9065734)
chr8 (1-56)||(11674717-11674772)
chr8 (1-56)||(44664530-44664585)
chr8 (8-89)||(11291056-11291137)
chr8 (5-54)||(12199259-12199308)
chr8 (5-54)||(12443687-12443736)
chr8 (1-46)||(16388605-16388650)
chr8 (1-90)||(23507742-23507831)
chr8 (1-61)||(7983450-7983510)
chr8 (1-61)||(10445679-10445739)
chr8 (1-121)||(13186082-13186202)
chr8 (1-61)||(15229953-15230013)
chr8 (1-121)||(16388812-16388932)
chr8 (1-53)||(34685612-34685663)
chr8 (1-61)||(40318310-40318370)
[»] scaffold0181 (1 HSPs)
scaffold0181 (17-122)||(9388-9493)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-53)||(6433-6485)
[»] scaffold0220 (1 HSPs)
scaffold0220 (8-131)||(24622-24745)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-131)||(239827-239957)
[»] scaffold0100 (1 HSPs)
scaffold0100 (17-122)||(31058-31163)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-56)||(139694-139749)
scaffold0020 (1-53)||(139995-140047)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-121)||(68987-69107)
scaffold0031 (1-53)||(69319-69371)
[»] scaffold0291 (1 HSPs)
scaffold0291 (3-90)||(6523-6610)
[»] scaffold0775 (1 HSPs)
scaffold0775 (4-53)||(4987-5036)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-61)||(12583-12643)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-53)||(19879-19931)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-61)||(1791-1851)
scaffold0007 (1-34)||(2114-2147)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-56)||(14741-14796)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-61)||(11484-11544)


Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 2 - 346
Target Start/End: Original strand, 30127464 - 30127811
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||| ||||||||||| || ||| | |||| ||||||||||||||||||||||||||| | |||||||||||||||||| || ||||| ||||    
T  30127464 tgcaattagggatcgtttaaaaattg-tccatatatttgttaatccttgcaatttgccctcccaaggtttaatcacttaaaaattgatccctcaacccag 30127562  T
Q  102 ttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttccttgcagt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  30127563 ttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcatcatcttctcccttttccctctcgtttgcttgcagt 30127662  T
Q  202 cttctcccagcaacacaa-tttaccaaatccatgttcccccactttcatcaaacaaacaatagcatgaaacta---aaaaatatcatcatatcatatcat 297  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  30127663 cttctcccagcaacacaattttaccaaatccatgttcccccactttcatcaaacaaacaatagcatgaaactaaataaaaatatcatcatatcatatcat 30127762  T
Q  298 ataaaatttcaatgcatgattcaagattaattgcataaacaaattctct 346  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  30127763 ataaaatttcaatacatgattcaagattaattgcataaacaagttctct 30127811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 21724522 - 21724363
Alignment:
Q  17 tttaaaaaatggtccctgtattcgtt---aatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgcc 113  Q
    ||||||||||||||| ||||||||||   |||||| ||||||||||||||||||  ||||||||||||||||| ||| ||||||||| ||||||||||||    
T  21724522 tttaaaaaatggtccatgtattcgttgttaatcctagcaatttgccctcccaaaatttaatcacttaaaaattagtccctcaatccaattaatcagtgcc 21724423  T
Q  114 acgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttc 173  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||    
T  21724422 acgtcactgattagctgatataacttttgaaaagaccaaaatacccatggcttcatcttc 21724363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18670269 - 18670139
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |  |||    
T  18670269 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaatcacttaaaatttggtccctaagccca 18670170  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||| | ||||||||||||||||||||||    
T  18670169 tttaattactgccacgtcactgattagctga 18670139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30128753 - 30128623
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||||| ||| || || |  |||    
T  30128753 ttgcaattaagggtcgtttaaaaaatggtccctatattcgttaattcttgcaatttaccctcccaaagtttaatcacttaaaatttgatccctgagccca 30128654  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||| | ||||||||||||||||||||||    
T  30128653 tttaattactgccacgtcactgattagctga 30128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5457313 - 5457183
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||||  ||| | ||||||| |||||| || ||| ||||  |||    
T  5457313 ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttcgtccctcatccca 5457214  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
    |||||||| ||||||||||||||||||||||    
T  5457213 gttaatcactgccacgtcactgattagctga 5457183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 43123198 - 43123327
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||||  | ||||| |||||  |||||| ||||||||| ||| || |  |||     
T  43123198 tgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactaccctctcaaagtataatcatttaaaaattagtccctgagcccaa 43123297  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    ||||| | ||||||||||||||||||||||    
T  43123298 ttaatgactgccacgtcactgattagctga 43123327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 20426735 - 20426606
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||| ||||| ||||||| |||||| || ||| ||||  |||     
T  20426735 tgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatttaaaatttagtccctcatcccac 20426636  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    | || || ||||||||||| ||||||||||    
T  20426635 taaaccactgccacgtcaccgattagctga 20426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10935816 - 10935936
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||  ||  | ||||||| |||||| || ||| |||  ||||    
T  10935816 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctcca 10935915  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||| ||||||    
T  10935916 cttaatcactgccatgtcact 10935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27992114 - 27992062
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27992114 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 27992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28469414 - 28469354
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  28469414 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccct 28469354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32298799 - 32298851
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  32298799 ttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaa 32298851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48788825 - 48788877
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  48788825 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 48788877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37657243 - 37657190
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  37657243 ttgcaattagggatcgtttaaaaattgatccctgtattcgttaatccttgcaat 37657190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45011010 - 45010893
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||||||||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  45011010 ttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccca 45010911  T
Q  101 gttaatcagtgccacgtc 118  Q
     ||||||| |||||||||    
T  45010910 cttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6253846 - 6253794
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  6253846 ttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaa 6253794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6571035 - 6571095
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||| ||||    
T  6571035 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttaccct 6571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13386153 - 13386101
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  13386153 ttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaa 13386101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17885650 - 17885702
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  17885650 ttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaa 17885702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24389191 - 24389139
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  24389191 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 24389139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42362472 - 42362524
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  42362472 ttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaa 42362524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6253493 - 6253548
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  6253493 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 6253548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17102042 - 17102097
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  17102042 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 17102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40379791 - 40379846
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| |||||  |||||||| |||||||||||||||    
T  40379791 ttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaattt 40379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 30127840 - 30127882
Alignment:
Q  361 gataacaattaataaatttccttagcaccatgtctgcaacacc 403  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  30127840 gataacaattaataaatttccttagcaccatgtatgcaacacc 30127882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 2640203 - 2640252
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  2640203 caattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaa 2640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 5455854 - 5455931
Alignment:
Q  6 attaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||  ||| |||  ||||| ||||||| ||||||    
T  5455854 attaggggtcgtttaaaaattggtccctgtattctctaatccttgcatattgtcctttcaaagtttaatcatttaaaa 5455931  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 15714437 - 15714538
Alignment:
Q  21 aaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcac 120  Q
    ||||||||| | ||||||| |||||||| ||| |||||||| |||||  || ||||||||||||||||||  |||| ||||||||  | |||||| ||||    
T  15714437 aaaaatggttcatgtattccttaatcctggcattttgccctgccaaaatttcatcacttaaaaattggtccttcaacccagttaactactgccacatcac 15714536  T
Q  121 tg 122  Q
    ||    
T  15714537 tg 15714538  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 18856059 - 18855978
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||| | |||| || ||||  ||||| ||||||| ||||||    
T  18856059 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaa 18855978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10936200 - 10936148
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| ||||||||| |||||| |||||||| ||||||||||||    
T  10936200 ttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaa 10936148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16804051 - 16803991
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| |||  |||||| ||||||| ||||    
T  16804051 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttaccct 16803991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17102395 - 17102343
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||| ||||    
T  17102395 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaa 17102343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 19204515 - 19204571
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||| ||||||||||| |||||||| || ||||||| ||||    
T  19204515 aattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttaccct 19204571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22871683 - 22871623
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||||||| |||||||| ||||||||||| | | ||||||||||||||| ||||    
T  22871683 ttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttaccct 22871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32299111 - 32299051
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  32299111 ttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 32299051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42019619 - 42019671
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||    
T  42019619 ttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 42019671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27397001 - 27396954
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  27397001 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27396954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42731441 - 42731496
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||| |||||||    
T  42731441 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaattt 42731496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17886896 - 17886778
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||| || |||||||| || ||| |||||||||||||||||||||  | ||||  ||||  ||||||| |||||| || ||| ||  | |||    
T  17886896 ttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcatttaaaatttcgtcccttgaccca 17886797  T
Q  101 gttaatcagtgccacgtca 119  Q
     ||||||| ||||||||||    
T  17886796 cttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23608830 - 23608896
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaa 67  Q
    |||||| |||||||| |||||||| |||||||||||||  |||||||| ||| |||||||| |||||    
T  23608830 ttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcattttgccctgccaaa 23608896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 32687423 - 32687501
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||| |||| |||||||  ||||  ||||||| ||||||    
T  32687423 aattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaa 32687501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 20425642 - 20425683
Alignment:
Q  134 taacttgcaaaaagaccaaaatacccttggcttcatcttctc 175  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  20425642 taacttgcgaaaagaccaaaatacccctggcttcatcttctc 20425683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 20567336 - 20567276
Alignment:
Q  70 ttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| |||| || ||||| ||||| | ||||||||||||||||||||||||||||||||    
T  20567336 ttaatcatttaagaactggtc-ctcaacctagttaatcagtgccacgtcactgattagctga 20567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18086311 - 18086363
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| |||||||||||  || ||||||||||||    
T  18086311 ttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaa 18086363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18087744 - 18087692
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||| |||||||| ||||| ||||| ||| ||||||||||||    
T  18087744 ttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaa 18087692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 23609065 - 23608961
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||| ||||| || ||||||||||||||||| ||||| ||||||||  || |||||  |  ||||  ||||||||||||||| ||||  ||||| ||||    
T  23609065 tgcaaatagggatcatttaaaaaatggtccctatattccttaatcctgacattttgcattgtcaaaatttaatcacttaaaaagtggtttctcaacccag 23608966  T
Q  102 ttaat 106  Q
    |||||    
T  23608965 ttaat 23608961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24388841 - 24388901
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||| |||||||||||||| ||||| ||||||||| ||||| | ||||||| ||||    
T  24388841 ttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttaccct 24388901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27396655 - 27396703
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||| |||||| |||||||| ||||||||||||    
T  27396655 aattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaa 27396703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28469032 - 28469084
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| | |||||| ||||| ||||||    
T  28469032 ttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaa 28469084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40380090 - 40380038
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| |||||| ||||||||  |||||||||||    
T  40380090 ttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaa 40380038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 3914542 - 3914492
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  3914542 tgcaattagaggtcgtttaaaat-tggtccctgtattcgctaatccttgcaa 3914492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27991761 - 27991816
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||| ||| || |||||||| ||| ||||||| |||||||    
T  27991761 ttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaattt 27991816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 7354885 - 7354943
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccc 60  Q
    ||||| |||||||| |||||||| |||||||| |||||||||||| | ||| |||||||    
T  7354885 tgcaaataggggtcatttaaaaattggtccctatattcgttaatcgtggcattttgccc 7354943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18855433 - 18855479
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    ||||| |||||||| ||||||||||||||||| || |||||||||||    
T  18855433 tgcaaataggggtcatttaaaaaatggtccctataatcgttaatcct 18855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28105523 - 28105572
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    ||||||||| |||||||||||||| | ||||||||||||  |||||||||    
T  28105523 ttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatccttg 28105572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23181400 - 23181340
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||| | |||||| |||| ||| ||||| | ||||||| ||||    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttaccct 23181340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 32053546 - 32053494
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||| ||||||||||| |||| ||| || ||||||||||| |||||||    
T  32053546 caattagggatcgtttaaaaattggttcctataatcgttaatcctagcaattt 32053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 33808357 - 33808397
Alignment:
Q  13 gtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  33808357 gtcgtttaaaaattggtctctgtattcgctaatccttgcaa 33808397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42731821 - 42731773
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||| || ||||| ||| || ||||||||||||    
T  42731821 aattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaa 42731773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47945379 - 47945431
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||| ||||||||||| |||| | |||||||| ||||||||||||    
T  47945379 ttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaa 47945431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47950809 - 47950861
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||| ||||||||||| |||| | |||||||| ||||||||||||    
T  47950809 ttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaa 47950861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 5e-75; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 13378548 - 13378746
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||| |||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||| |||  ||||||||||||||||||||| ||||| ||||    
T  13378548 tgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaatcacttaaaaattggtccctcaacccag 13378647  T
Q  102 ttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttccttgcag 200  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13378648 ttaatcagtgccacgtcactgattagctgatgtaacttgtgaaaagaccaaaatacccatggcttcatcttcttccttttccctctcgtttccttgcag 13378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 26464604 - 26464405
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||| |||  |||||||||||||||||| || ||||| | ||    
T  26464604 tgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccctcctaaaaattaatcacttaaaaattgatccctcaacctag 26464505  T
Q  102 ttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctc-gtttccttgcag 200  Q
    |||||||||||||| || || |||||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||    
T  26464504 ttaatcagtgccacatcgctaattagtggatgtaacttgcgaaaagaccaaaatacccctggcttcatcttcttccttttccctatcagtttccttgcag 26464405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 15116638 - 15116445
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||  ||| ||| ||||||||||||  |  |||  ||||| ||||||| ||||||||||||| ||||| |||    
T  15116638 ttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatttaaaaattggtccctcaaccca 15116539  T
Q  101 gttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttcct 195  Q
    |||||||  ||||||||||||||||| || ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  15116538 gttaatcgatgccacgtcactgattaact-atgtaacttgcgaaaataccaaaatacccatggcttcatcttcttccttttccctctcatttcct 15116445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 8090333 - 8090175
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| |||||| |||||||  |||||||||||| || ||||  ||||| ||||||| |||||| |||||| || |  |||    
T  8090333 ttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaatttggtccctgagccca 8090234  T
Q  101 gttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaataccc 159  Q
    |||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  8090233 gttaattattgccacgtcgctgattagctgatgtaacttgcgaaaagaccaaaataccc 8090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 12408574 - 12408377
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtt 103  Q
    ||||||||||| ||||||||  |||||| |||||||| |||||||||||| ||  |||  ||||| ||||||| |||||| ||| || || |  ||||||    
T  12408574 caattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcatttaaaatttgatccctgagcccagtt 12408475  T
Q  104 aatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctc-gtttccttgcag 200  Q
    ||| |  | ||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||| || ||||||||||||    
T  12408474 aattaccgtcacatcactgattagctgatgtagcttgcaaaaagaccaaaatgcccctggcttcatcttcttccttttccctttcagtttccttgcag 12408377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 26463202 - 26463326
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||  ||||| ||||||| |||||| || ||| ||||  ||||    
T  26463202 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccag 26463301  T
Q  102 ttaatcagtgccacgtcactgatta 126  Q
    ||||||| |||||||||||||||||    
T  26463302 ttaatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 28498430 - 28498301
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||| || |||||||| |||||| |||| ||| ||||||| ||||  | ||||||||||| ||||||| |||||| |||||| || |  ||||    
T  28498430 tgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaatttggtccctgagcccag 28498331  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| ||||||||||||||||||||||    
T  28498330 ttaatcactgccacgtcactgattagctga 28498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 29810841 - 29810712
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||| || |||||||| |||||| |||| ||  ||||| | ||||  | ||||||||||| ||||||| |||||| |||||| || |  ||||    
T  29810841 tgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatcatttaaaatttggtccctgagcccag 29810742  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| ||||||||||||||||||||||    
T  29810741 ttaatcactgccacgtcactgattagctga 29810712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3059662 - 3059610
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  3059662 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 3059610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30726165 - 30726113
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  30726165 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 30726113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33517940 - 33517888
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  33517940 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 33517888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33647357 - 33647305
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  33647357 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 33647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30337471 - 30337586
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||  ||  ||||||||| |||||| || ||| |||   |||    
T  30337471 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctcccca 30337570  T
Q  101 gttaatcagtgccacg 116  Q
     ||||||| |||||||    
T  30337571 cttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 681134 - 681004
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||  |  |||  |||   ||||||| |||||| || |||  | |  |||    
T  681134 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccatgagccca 681035  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
    |||||| | ||||||||||||||||||||||    
T  681034 gttaattactgccacgtcactgattagctga 681004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 12407533 - 12407658
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtt 103  Q
    |||||| || ||||||||||| ||||| ||||||||| ||||||||| || || | ||  ||||| ||||||| |||||| |||||| || || | ||||    
T  12407533 caattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatttaaaatttggtccctgaacctagtt 12407632  T
Q  104 aatcagtgccacgtcactgattagct 129  Q
    ||| | |||||||||||| |||||||    
T  12407633 aattactgccacgtcactaattagct 12407658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 8089466 - 8089517
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  8089466 tgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaa 8089517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 13379887 - 13379836
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  13379887 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaa 13379836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 679888 - 679940
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||    
T  679888 ttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 679940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 11393206 - 11393158
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  11393206 aattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaa 11393158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12081042 - 12080990
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| | ||||||||||||| ||||||||||||    
T  12081042 ttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaa 12080990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21628119 - 21627999
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||| ||||||| ||||||||||| ||| |||||||  |||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  21628119 ttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctcccca 21628020  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  21628019 cttaatcactgccacgtcact 21627999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30337824 - 30337772
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||    
T  30337824 ttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaa 30337772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30804267 - 30804215
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || |||||||||||| |||| |||||||    
T  30804267 ttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaa 30804215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 20651033 - 20651084
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| ||||||||||| |||| |||||||||| ||||||||||||    
T  20651033 tgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaa 20651084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15115361 - 15115443
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||| | ||||||||||| |||||||| || |||||||||||||||| ||  |||  ||||| ||||||| ||||||    
T  15115361 ttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaa 15115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11434824 - 11434876
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||| ||||||    
T  11434824 ttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaa 11434876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33517560 - 33517616
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  33517560 aattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 33517616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 1215030 - 1215117
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggt 89  Q
    ||||| ||||| || ||||||| |||||| |||||||  ||||||||  || ||||||||  ||||  ||||||||||||||||||||    
T  1215030 tgcaaatagggctcatttaaaacatggtctctgtattgcttaatcctgacattttgccctgtcaaaatttaatcacttaaaaattggt 1215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12080658 - 12080713
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| || |||||||| ||| ||||| | |||||||    
T  12080658 ttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaattt 12080713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 20652052 - 20652001
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| |||||||||||||| || |||||||||||  ||||||||||||    
T  20652052 tgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaa 20652001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3059279 - 3059339
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||| ||||||||||||| || |||| |||| ||| ||||||| ||||||| ||||    
T  3059279 ttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttaccct 3059339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7905265 - 7905325
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | |||| |||| ||||||||||| ||||||| ||||    
T  7905265 ttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttaccct 7905325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17734218 - 17734270
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| | |||| | | ||||||||||||    
T  17734218 ttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaa 17734270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31406900 - 31406956
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttg 57  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||| | ||||||    
T  31406900 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttg 31406956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 30096944 - 30096748
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtta 104  Q
    ||||||||||| ||||||||||||||||||||| | ||||| || ||||||| |||||| |||  ||||||||||||||||||||| ||||| | |||||    
T  30096944 aattaggggtcatttaaaaaatggtccctgtatccattaattctggcaatttaccctcctaaaaattaatcacttaaaaattggtccctcaacctagtta 30096845  T
Q  105 atcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctc-tcgtttccttgcag 200  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||    
T  30096844 atcagtgccacatcaccgattagttgatgtaacttgcgaaaagaccaaaatacccctggcttcatcttcttccttttccctcttagtttccttgcag 30096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 40148921 - 40149048
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||| | || |||||||| |||||| |||| ||||||||||| |||| || ||||  ||||| ||||||| |||| |||||||| ||||  ||||    
T  40148921 tgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaagaattggtccctcatcccag 40149020  T
Q  102 ttaatcagtgccacgtcactgattagct 129  Q
    |||||||||| ||||| |||||||||||    
T  40149021 ttaatcagtgtcacgtgactgattagct 40149048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 37991222 - 37991273
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37991222 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaa 37991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6301949 - 6301897
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  6301949 ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaa 6301897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8322810 - 8322758
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  8322810 ttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaa 8322758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11762123 - 11762071
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11762123 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 11762071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14194445 - 14194497
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  14194445 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 14194497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 14849106 - 14848982
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    ||||| || ||||||||||||||| ||||||| |||||| | ||| |||||||| |||||  ||||||| |||||| |||||| ||||  ||| ||||||    
T  14849106 tagggatcatttaaaaaatggtccatgtattccttaatcgtggcattttgccctaccaaaatttaatcatttaaaatttggtccctcaccccacttaatc 14849007  T
Q  108 agtgccacgtcact-gattagctga 131  Q
    | |||||| ||||| ||||||||||    
T  14849006 actgccacatcactagattagctga 14848982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19892330 - 19892382
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  19892330 ttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaa 19892382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28770891 - 28770943
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  28770891 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 28770943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40150220 - 40150100
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||||||||| | || || ||||  ||||| ||||||| |||| |||||||| ||||| | |    
T  40150220 ttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcatttaagaattggtccctcaaccta 40150121  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| |||||| |||||    
T  40150120 attaatcactgccacatcact 40150100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3529248 - 3529193
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  3529248 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattt 3529193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 42265758 - 42265809
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  42265758 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 42265809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 12904783 - 12904896
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||||||| |||||||||  ||||| | |||||| || ||| |||   ||| ||||||    
T  12904783 tagggatcatttaaaaaatggtccctgtattcgttaatcctgacaatttgtcctcccaaaatttaataatttaaaatttcgtccctctccccacttaatc 12904882  T
Q  108 agtgccacgtcact 121  Q
    | || |||||||||    
T  12904883 aatgtcacgtcact 12904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3528895 - 3528947
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  3528895 ttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaa 3528947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16156877 - 16156929
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  16156877 ttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaa 16156929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17202805 - 17202753
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  17202805 ttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaa 17202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20840555 - 20840615
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||| ||||    
T  20840555 ttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttaccct 20840615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27587521 - 27587469
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  27587521 ttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaa 27587469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28269444 - 28269496
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  28269444 ttgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaa 28269496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35512520 - 35512468
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  35512520 ttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaa 35512468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11761771 - 11761826
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  11761771 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 11761826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27587170 - 27587225
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  27587170 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 27587225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 5835649 - 5835734
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    |||||||| ||||||||||| |||| | |||||||||||||| |||||| || ||||  ||||| ||||||| |||||| ||||||    
T  5835649 aattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagtttaatcatttaaaatttggtc 5835734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5993911 - 5993971
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||| || ||||||| ||||    
T  5993911 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttaccct 5993971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6150826 - 6150774
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| | |||| |||||||||||||| ||||||    
T  6150826 ttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaa 6150774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16157261 - 16157201
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||  |||||| ||||    
T  16157261 ttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttaccct 16157201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18247482 - 18247430
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  18247482 ttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaa 18247430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19892714 - 19892594
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||| ||||||||||||| ||||| ||||| |||||||||||  |||||| ||||  ||  | ||||||| |||||| || |||| ||   |||    
T  19892714 ttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcattctcccca 19892615  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  19892614 cttaatcactgccacgtcact 19892594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24547199 - 24547251
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||    
T  24547199 ttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaa 24547251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35512170 - 35512230
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  35512170 ttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 35512230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38442473 - 38442421
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||    
T  38442473 ttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaa 38442421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38475405 - 38475345
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||  |||||| ||||    
T  38475405 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttaccct 38475345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39453322 - 39453382
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||| ||||||| ||||    
T  39453322 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccct 39453382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39453705 - 39453653
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  39453705 ttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaa 39453653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 5326080 - 5326139
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||| |||||||| |||||||||||||||||| |||| |||||||| ||| ||||||||    
T  5326080 tgcaaataggggtcatttaaaaaatggtccctgcattccttaatcctggcattttgccct 5326139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20814541 - 20814486
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||| |||||||    
T  20814541 ttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaattt 20814486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 21257566 - 21257515
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||    
T  21257566 tgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaa 21257515  T

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Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 35920588 - 35920543
Alignment:
Q  3 gcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 186825 - 186773
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||| ||||||||||||| ||||||||||||| | ||||| ||||||    
T  186825 ttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaa 186773  T

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Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5024041 - 5024093
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || | | |||||||| ||||||||||||    
T  5024041 ttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaa 5024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5994295 - 5994243
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||| | |||||||| ||||||||||||    
T  5994295 ttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaa 5994243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11740709 - 11740761
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || ||| | |||||| ||||||||||||    
T  11740709 ttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaa 11740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13362634 - 13362574
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||| | ||||||| ||||    
T  13362634 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttaccct 13362574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13962886 - 13962946
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| | | ||||||| | ||||| ||||    
T  13962886 ttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttaccct 13962946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13963231 - 13963183
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  13963231 aattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaa 13963183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 14848762 - 14848850
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||| ||||| || |||||||||||||   || |||| |||||||||||| ||| ||||||||||  ||||||| |||||| ||||||    
T  14848762 tgcaaatagggatcatttaaaaaatggtttgtgcattccttaatccttgcatttttccctcccaaaatttaatcatttaaaatttggtc 14848850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24547531 - 24547471
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||| | || ||| ||||||| ||||||| ||||    
T  24547531 ttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttaccct 24547471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 29646388 - 29646436
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  29646388 aattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaa 29646436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 42067929 - 42067794
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactca--atcc 99  Q
    |||||||||||||| |||||||  ||||||||||| | | ||||||| ||||  |||||   ||||  ||||||| |||||| || |||  |||  |||     
T  42067929 tgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatcatttaaaatttcgtccttcatcatca 42067830  T
Q  100 a-gttaatcagtgccacgtcactgattagctgatgt 134  Q
    | |||||||| |||||||||||||||||||||||||    
T  42067829 aagttaatcactgccacgtcactgattagctgatgt 42067794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43159220 - 43159172
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 49  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||||||    
T  43159220 ttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatcctt 43159172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21265167 - 21265217
Alignment:
Q  3 gcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||||||||||||| |||||| |||||| | ||||||||||||    
T  21265167 gcaattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaa 21265217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 6301576 - 6301617
Alignment:
Q  12 ggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  6301576 ggtcgtttaaaaattggtccttgtattcgctaatccttgcaa 6301617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8875671 - 8875618
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||| |||||    
T  8875671 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 15645108 - 15644999
Alignment:
Q  11 gggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagt 110  Q
    ||||| |||||||| ||||   ||||||||||||||||  || ||||||||||||||  ||||||| |||||| || ||| ||  | ||| ||||||| |    
T  15645108 gggtcatttaaaaattggtttatgtattcgttaatcctgacattttgccctcccaaaatttaatcatttaaaatttcgtccctacacccacttaatcact 15645009  T
Q  111 gccacgtcac 120  Q
    ||||| ||||    
T  15645008 gccacatcac 15644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16083002 - 16083059
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  16083002 caattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttaccct 16083059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17202424 - 17202481
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||||||||||||| ||||| ||||| ||| |||||||  |||||| ||||    
T  17202424 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttaccct 17202481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18670224 - 18670269
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||| ||||||||||||||||| ||||||||||| ||| |||||    
T  18670224 ttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc 18670269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 24141475 - 24141556
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||  ||| |||||||| ||||||||||| ||||||||||| |||| ||  |||  ||||| ||||||| ||||||    
T  24141475 tgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaa 24141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5835832 - 5835780
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| || ||||||||| ||||  ||||||||| ||||||||||||    
T  5835832 ttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaa 5835780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17544452 - 17544392
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | || |||||| ||||||||||| ||||||| ||||    
T  17544452 ttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttaccct 17544392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18247108 - 18247152
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaat 45  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||    
T  18247108 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat 18247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19518013 - 19517961
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| ||||||||| | |||| |||||||| ||||| ||||||    
T  19518013 ttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaa 19517961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32242264 - 32242384
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| || |||||||| | | ||||| | ||||||| | ||  ||  | ||||||| |||||| || ||| |||   |||    
T  32242264 ttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctcccca 32242363  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  32242364 cttaatcactgccacgtcact 32242384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32242647 - 32242596
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| ||||||||| | || |||||||||| ||||||||||||    
T  32242647 ttgcaattaggggttgtttaaaaattagt-cctgtattcgctaatccttgcaa 32242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 35920254 - 35920302
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||||||||||| |||||  |||||||| ||||||||||||    
T  35920254 aattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaa 35920302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 43742081 - 43741865
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||| | |||| |||||||| |||||| |||| || ||||||||  ||| || ||||  ||||| ||||||| |||||||||| || ||||| ||||    
T  43742081 tgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcatttaaaaattgatccctcaacccag 43741982  T
Q  102 ttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttccttgcagt 201  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||||  ||    
T  43741981 ttaatcggtgccacgtcattgattagctgatgtaacttgcgaaaagaccaaaatatcactggcttcatcttctcccttttccctctcgtttccttgtcgt 43741882  T
Q  202 cttctcccagcaacaca 218  Q
    ||||||||| |||||||    
T  43741881 cttctcccaacaacaca 43741865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 3556234 - 3556181
Alignment:
Q  143 aaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttcctt 196  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  3556234 aaaagaccaaaatacccatggcttcatcttcttccttttccctctcgtttcctt 3556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 44045407 - 44045290
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |  |||  |||   ||||||| |||||| || ||| ||||  ||||    
T  44045407 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtccctcatcccag 44045308  T
Q  102 ttaatcagtgccacgtca 119  Q
    ||||||| ||||||||||    
T  44045307 ttaatcactgccacgtca 44045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13692626 - 13692574
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  13692626 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 13692574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 11689834 - 11689755
Alignment:
Q  11 gggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||| ||||||||||||||  ||||||| |||||||| |||||||| ||| |||||  |||||||||||||||||||||    
T  11689834 gggtcatttaaaaaatggtctttgtattctttaatcctagcaatttgtcctgccaaaatttaatcacttaaaaattggtc 11689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 25230125 - 25230176
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  25230125 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 25230176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15848110 - 15848243
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| | ||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  15848110 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 15848209  T
Q  101 gttaatcagtgccacgtcactgattagctgatgt 134  Q
     ||||||| |||||||||||| ||| | ||||||    
T  15848210 cttaatcactgccacgtcactaatttgatgatgt 15848243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6588705 - 6588757
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  6588705 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 6588757  T

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Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6658253 - 6658201
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  6658253 ttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 6658201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9076473 - 9076421
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  9076473 ttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaa 9076421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 11721222 - 11721298
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaa 84  Q
    |||||||| ||||||||||| ||| ||||||| |||||||| ||| |||||||| |||||  |||||||||||||||    
T  11721222 taggggtcatttaaaaaatgatccttgtattctttaatcctagcattttgccctgccaaaatttaatcacttaaaaa 11721298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16099430 - 16099378
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  16099430 ttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaa 16099378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34448201 - 34448149
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  34448201 ttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaa 34448149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37895369 - 37895421
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  37895369 ttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 37895421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11163429 - 11163374
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  11163429 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 11163374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 39498336 - 39498387
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  39498336 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattt 39498387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 25231253 - 25231172
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||| |||| || ||||  ||||  ||||||| ||||||    
T  25231253 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatttaaaa 25231172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3555272 - 3555320
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 49  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  3555272 ttgcaattaggggtcgtttaaaaattggtctctgtattcgttattcctt 3555320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3556415 - 3556363
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  3556415 ttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaa 3556363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11163076 - 11163128
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  11163076 ttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 11163128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30729643 - 30729703
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||  |||||||||||| |||||||| |||||| |||||||||||| |||||||    
T  30729643 ttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgccct 30729703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36382533 - 36382481
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  36382533 ttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaa 36382481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36480124 - 36480072
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||||||||||||    
T  36480124 ttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaa 36480072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36755494 - 36755442
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  36755494 ttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaa 36755442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39423921 - 39423869
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  39423921 ttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaa 39423869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39498685 - 39498633
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||||||||||||    
T  39498685 ttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaa 39498633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 16105581 - 16105656
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||| | |||||||||||||||||| |||| ||||||||  || ||||||||||||||  ||||||| ||||||    
T  16105581 taggggccatttaaaaaatggtccctgcattccttaatcctgacattttgccctcccaaaatttaatcatttaaaa 16105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 17266717 - 17266654
Alignment:
Q  20 aaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||||||||| ||||||||||||||| |  |||||||||||||||||  ||||||| ||||||    
T  17266717 aaaaaatggtctctgtattcgttaatcttgacaatttgccctcccaaaatttaatcatttaaaa 17266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45556134 - 45556189
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||| |||||||    
T  45556134 ttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 45556189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 11689570 - 11689688
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| |||||||| || ||||||||||| |||||||  ||| |||| ||| |||||  |||||||||||||| || |||  ||   ||| ||||||    
T  11689570 taggggtcatttaaaaattgatccctgtattctttaatcccggcattttgtcctgccaaaatttaatcacttaaaatttcgtccatctccccacttaatc 11689669  T
Q  108 agtgccacgtcactgatta 126  Q
    | |||||||||||| ||||    
T  11689670 actgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 28230141 - 28230063
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||| |||| || ||||  ||||| ||||||| ||||||    
T  28230141 aattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaa 28230063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 11349542 - 11349481
Alignment:
Q  70 ttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| |||||| || ||| ||||| |||||||||||||||||||||  |||||||||||    
T  11349542 ttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacgtctttgattagctga 11349481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6307124 - 6307076
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 49  Q
    |||||||||| ||||||||||||| |||||||| || ||||||||||||    
T  6307124 ttgcaattagtggtcgtttaaaaattggtccctataatcgttaatcctt 6307076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10713129 - 10713077
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||  ||||||||| ||||||||||||    
T  10713129 ttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaa 10713077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 28228693 - 28228737
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||    
T  28228693 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 28228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37895753 - 37895633
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||| ||||||||||||||||||| || ||| ||| ||||||| ||||||| | ||  ||  | ||||||| |||||| || ||| |||   |||    
T  37895753 ttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgtccctctcccca 37895654  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  37895653 cttaatcactgccacgtcact 37895633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 44044137 - 44044185
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    ||||||||||||| ||||||||| ||||||||||||||  |||||||||    
T  44044137 tgcaattaggggtggtttaaaaattggtccctgtattcactaatccttg 44044185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44714167 - 44714107
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| | ||||||||| | | ||||||| ||||||| ||||    
T  44714167 ttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttaccct 44714107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 45556449 - 45556401
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||| ||||| ||||||||| ||||| ||||||    
T  45556449 aattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaa 45556401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14900856 - 14900801
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| | ||||||||| | | ||||||| |||||||    
T  14900856 ttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattt 14900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16099077 - 16099132
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||||||| |||||||| ||||||||||| ||  ||||||| |||||||    
T  16099077 ttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaattt 16099132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 11721489 - 11721371
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| |||||||| || ||||||||||| ||||||||  || |||  ||| |||||  |||||||||||||| || ||| |||   ||| ||||||    
T  11721489 taggggtcatttaaaaattgatccctgtattctttaatcctgacattttatcctgccaaaatttaatcacttaaaatttcgtctctctccccacttaatc 11721390  T
Q  108 agtgccacgtcactgatta 126  Q
    | || ||||||||| ||||    
T  11721389 actgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15848494 - 15848444
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgc 51  Q
    |||||||||||||||||||||||| ||||   |||||||| ||||||||||    
T  15848494 ttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgc 15848444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 17266427 - 17266509
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||| || ||||||||||||||  |||||||||| |||||  |||||| |||| |||||  ||||||| |||||| ||||||    
T  17266427 tagggatcatttaaaaaatggtcaatgtattcgtttatcctgacaattttcccttccaaaatttaatcatttaaaatttggtc 17266509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21370597 - 21370556
Alignment:
Q  12 ggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||| || ||| |||||||||||||||||||||    
T  21370597 ggtcgtttaaaaattgatccatgtattcgttaatccttgcaa 21370556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36479740 - 36479785
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||||||||||||||||||||| |||||| |||| ||| |||||    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 36479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10712745 - 10712805
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||| ||||||||||| |||||| | || || |||||||| ||||||| ||||    
T  10712745 ttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttaccct 10712805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15604361 - 15604421
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  15604361 ttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 15604421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15604743 - 15604683
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  15604743 ttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttaccct 15604683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28226148 - 28226088
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  28226148 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 28226088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36382183 - 36382243
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||| ||||||||||| |||||||| || ||| |||||||  |||||| ||||    
T  36382183 ttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttaccct 36382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44713821 - 44713869
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||| |||||||||||||| |||||  |||||||| ||||||||||||    
T  44713821 aattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaa 44713869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 33160 - 33001
Alignment:
Q  17 tttaaaaaatggtccctgtattcgtt---aatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgcc 113  Q
    ||||||||||||||| ||||||||||   |||||| ||||||||||||||||||  ||||||||||||||||| ||| ||||||||| ||||||||||||    
T  33160 tttaaaaaatggtccatgtattcgttgttaatcctagcaatttgccctcccaaaatttaatcacttaaaaattagtccctcaatccaattaatcagtgcc 33061  T
Q  114 acgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttc 173  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||    
T  33060 acgtcactgattagctgatataacttttgaaaagaccaaaatacccatggcttcatcttc 33001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 31678 - 31776
Alignment:
Q  33 tgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgattagctga 131  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  31678 tgtattcgttaatccttacaatttgccctcccaaaatttaatcacttaaaaattggtctctcaacccagttaatcaatgccacgtcactgattagctga 31776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 26718789 - 26718636
Alignment:
Q  65 aaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggc 164  Q
    |||| ||||||| ||||||||||||| ||||| ||  ||||| || ||||| ||| | ||||||||||||||||||| |||||||||||||| || || |    
T  26718789 aaagtttaatcatttaaaaattggtccctcaaccccattaataagcgccacatcattaattagctgatgtaacttgcgaaaagaccaaaatatccctgac 26718690  T
Q  165 ttcatcttctcccttttccctctcgtttccttgcagtcttctcccagcaacaca 218  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||| |||||||    
T  26718689 ttcatcttctccctttcccctctcgtttccttgtcgtcttctcccaacaacaca 26718636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 26718593 - 26718521
Alignment:
Q  225 caaatccatgttcccccactttcatcaaacaaacaatagcatgaaacta---aaaaatatcatcatatcatat 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  26718593 caaatccatgttcccccactttcatcaaacaaacaatagcatgaaactaaataaaaatatcatcatatcatat 26718521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 33154900 - 33155027
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||  ||| ||  |||   |||| ||||||| |||| |||||||| ||||| ||||    
T  33154900 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatttaagaattggtccctcaacccag 33154999  T
Q  102 ttaatcagtgccacgtcactgattagct 129  Q
    ||||| ||||||| ||||||||||||||    
T  33155000 ttaattagtgccaagtcactgattagct 33155027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 25107236 - 25107365
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||| ||||| || || ||| ||||||| |||| ||||||   |||| |||||||| |||||| || ||| ||||   |||    
T  25107236 tgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaatttcgtccctcatcacag 25107335  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| |||||||||| |||||||||||    
T  25107336 ttaatcactgccacgtcagtgattagctga 25107365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3849054 - 3849105
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  3849054 tgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaa 3849105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9367766 - 9367815
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  9367766 caattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaa 9367815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 3850532 - 3850484
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  3850532 tgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttg 3850484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9368707 - 9368655
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  9368707 ttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaa 9368655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23458001 - 23458053
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  23458001 ttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 23458053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 26479324 - 26479212
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| |||||||||||||| ||||| || |||||| | ||||  ||||||||||||| |||||||||||||| || ||| || || ||| |||||     
T  26479324 taggggtcatttaaaaaatggtctctgtaatccttaatcgtggcaacctgccctcccaaagtttaatcacttaaaattttgtcccttaacccacttaatg 26479225  T
Q  108 agtgccacgtcac 120  Q
    | ||||| |||||    
T  26479224 attgccatgtcac 26479212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36417714 - 36417762
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  36417714 aattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 36417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 25108500 - 25108371
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||  ||||||||||| | | ||||||| ||||  || ||   |||| |||||||| |||||| || |||  |||   |||    
T  25108500 tgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcatttaaaatttcgtccttcatcacag 25108401  T
Q  102 ttaatcagtgccacgtcactgattagctga 131  Q
    ||||||| ||||||||||||||||||||||    
T  25108400 ttaatcactgccacgtcactgattagctga 25108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 26479093 - 26479174
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||| |||||||  ||||||||||||||| |||| |||||||||||  |||| || |||||||||| ||| ||||||||||    
T  26479093 tgcaaataggggtgatttaaaaaatggtccatgtaatcgttaatcctgacaatctgacctcccaaagtttagtcacttaaaa 26479174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51993986 - 51994039
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||    
T  51993986 ttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttacaat 51994039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2796201 - 2796261
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  2796201 ttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 2796261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9294364 - 9294304
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||| ||||||| ||||    
T  9294364 ttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttaccct 9294304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19741298 - 19741238
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||| | ||||||| ||||    
T  19741298 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttaccct 19741238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23458385 - 23458325
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||| ||||    
T  23458385 ttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttaccct 23458325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34142624 - 34142580
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaat 45  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  34142624 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaat 34142580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 36418090 - 36418042
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  36418090 aattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaa 36418042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 1079626 - 1079575
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  1079626 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaa 1079575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 19740946 - 19740997
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  19740946 tgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaa 19740997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 21783426 - 21783550
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtta 104  Q
    ||||| ||||||||||||   |||| |||||||||| ||||||||||||  |  |||| |||||  |||||| | ||||||||||| || |  | |||||    
T  21783426 aattaagggtcgtttaaat--tggttcctgtattcgctaatccttgcaaactatcctctcaaagtataatcattgaaaaattggtccctgagcctagtta 21783523  T
Q  105 atcagtgccacgtcactgattagctga 131  Q
    || | ||||||||||||||||||||||    
T  21783524 atgactgccacgtcactgattagctga 21783550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 30381143 - 30381064
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattg 87  Q
    |||| ||| ||||||||||||||| ||||||| ||||| || ||| |||||||| |||||  ||||||| ||||||||||    
T  30381143 taggagtcatttaaaaaatggtccatgtattctttaattctggcattttgccctgccaaaatttaatcatttaaaaattg 30381064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 14633890 - 14633964
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtca 91  Q
    ||||||||||||||  ||||||| ||||||||  || |||| ||| |||||  ||||||||||||||||||||||    
T  14633890 tttaaaaaatggtctatgtattctttaatcctgacattttgtcctaccaaaatttaatcacttaaaaattggtca 14633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14634158 - 14634081
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcact 78  Q
    |||||| |||||||| |||||||| |||||||||||||| ||||||   ||| |||||||| |||||  |||||||||    
T  14634158 ttgcaaataggggtcatttaaaaattggtccctgtattccttaatcgaggcattttgccctgccaaaatttaatcact 14634081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 21783899 - 21783850
Alignment:
Q  3 gcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgca 52  Q
    |||||||||||||||||||||| | |||| | ||||||||||||||||||    
T  21783899 gcaattaggggtcgtttaaaaattagtccttatattcgttaatccttgca 21783850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 33155080 - 33155133
Alignment:
Q  143 aaaagaccaaaatacccttggcttcatcttctcccttttccctctcgtttcctt 196  Q
    ||||||||||| ||||| || ||||||||||| | |||||||||||||||||||    
T  33155080 aaaagaccaaagtacccctgacttcatcttcttctttttccctctcgtttcctt 33155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35712066 - 35712119
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||| || |||||||| |||||| |||||||| |||||||||||||    
T  35712066 ttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaat 35712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 55052318 - 55052367
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||||||||| |||||| ||||| ||||||||| |||||||||||||    
T  55052318 aattaggggtcgtctaaaaattggtctctgtattcgctaatccttgcaat 55052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 1078560 - 1078604
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||    
T  1078560 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 1078604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26463654 - 26463706
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| || ||| |||||||| ||||||||||||    
T  26463654 ttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaa 26463706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33689785 - 33689725
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||| | |||| ||| ||||||| ||||||| ||||    
T  33689785 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttaccct 33689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40758516 - 40758464
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||| |||||||| |||||  |||||||| ||||||||||||    
T  40758516 ttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaa 40758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 53757129 - 53757077
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||  |||||||||||| |||||| |||||||| ||||||||||||    
T  53757129 ttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaa 53757077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36150549 - 36150596
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||||||| |||||| | |||| |||||||||    
T  36150549 ttgcaattaggggtcgtttaaaaattggtccttatatttgttaatcct 36150596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36314673 - 36314618
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||| |||||||||||| | ||||||||| | ||||||||| |||||||    
T  36314673 ttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattt 36314618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40758169 - 40758216
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||||||| |||||| |||| ||| |||||||    
T  40758169 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 40758216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41558030 - 41558081
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgca 52  Q
    ||||||||| |||||||||||||| |||| | |||||||| |||||||||||    
T  41558030 ttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgca 41558081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 41558287 - 41558236
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| |  ||| |||||||| ||||||||||||    
T  41558287 tgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaa 41558236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 43607803 - 43607854
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| | ||| |||||||| ||||||||||| ||||||||||||||||    
T  43607803 tgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaa 43607854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46474837 - 46474892
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||| | |||||||    
T  46474837 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaattt 46474892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48322752 - 48322697
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||| |||||||||||| | ||||||||| | ||||||||| |||||||    
T  48322752 ttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattt 48322697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 23276388 - 23276282
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||| ||||||||||| ||| ||||||  |||| || |||   |||| |||||||| |||||| || ||| ||||   |||    
T  23276388 tgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcatttaaaattttgtccctcatcacag 23276289  T
Q  102 ttaatca 108  Q
    |||||||    
T  23276288 ttaatca 23276282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33156400 - 33156270
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||| ||| |||||||| | |||  |||| ||||||||| | ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  33156400 ttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttcgtccctcccccca 33156301  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||||| |||||||||||| |||||||||    
T  33156300 cttaatcactgccacgtcactaattagctga 33156270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 21186100 - 21186019
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||||||| |||||||| |||| | |||| ||||||||||| |||| || ||||  ||||  ||||||| ||||||    
T  21186100 tgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaa 21186019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40033541 - 40033594
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||||| || ||||||||||| || ||| |||||||| |||||||||||||    
T  40033541 ttgcaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaat 40033594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33689404 - 33689455
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| | |||||||| |||| |||||||    
T  33689404 ttgcaattaggggtcgtttaaaaattggt-catgtattcgctaattcttgcaa 33689455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42855711 - 42855659
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| ||| |||||||| | |||| |||||||| ||||||||||||    
T  42855711 ttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaa 42855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43384689 - 43384637
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||  ||||||||||| | ||| || |||||||||||||||||||    
T  43384689 ttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaa 43384637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 54896069 - 54896157
Alignment:
Q  20 aaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatca 108  Q
    |||||||| | | ||||||| |||| | ||||| |||| ||| |||||  ||| ||||||||||||||||| ||||| ||| |||||||    
T  54896069 aaaaaatgattcatgtattccttaacctttgcattttgtcctaccaaaatttattcacttaaaaattggtctctcaacccacttaatca 54896157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 54896254 - 54896202
Alignment:
Q  70 ttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactg 122  Q
    |||||||||||||||||| || ||| | ||||||||| ||||||| |||||||    
T  54896254 ttaatcacttaaaaattgatccctctacccagttaattagtgccatgtcactg 54896202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 11857915 - 11858039
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||| ||| |||| ||||||||||||||||||||||| |||||||| ||| ||||| || |||||  ||||||||||||||||||||| |||| ||||     
T  11857915 tgcaaatagaggtcatttaaaaaatggtccctgtattccttaatcctggcattttgctctgccaaaatttaatcacttaaaaattggtccctcattccac 11858014  T
Q  102 ttaatcagtgccacgtcactgatta 126  Q
    ||||||| || ||||||||| ||||    
T  11858015 ttaatcactgtcacgtcactaatta 11858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 55866134 - 55866255
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||||||||||||||| ||||   |||||||  |||||||||||| || ||||| |||||  |||||| ||||||||||||| || || ||||    
T  55866134 tgcaattaggggtcgtttaaaaattggtt--tgtattcactaatccttgcaaattaccctctcaaagtataatcatttaaaaattggtccctgaacccag 55866231  T
Q  102 ttaatcagtgccacgtcactgatt 125  Q
    ||||| | ||||||||||||||||    
T  55866232 ttaataactgccacgtcactgatt 55866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24349696 - 24349748
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  24349696 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 24349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50418690 - 50418742
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  50418690 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaa 50418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51692925 - 51692873
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  51692925 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 51692873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 148160 - 148109
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  148160 tgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaa 148109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7451856 - 7451911
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  7451856 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattt 7451911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 41582470 - 41582589
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||| ||||||| |||||||| |||||||| || ||||||||||| |||| ||||||   |||| |||||||| |||||| || ||| ||||   |||    
T  41582470 tgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcatcacag 41582569  T
Q  102 ttaatcagtgccacgtcact 121  Q
    ||||||| ||||||||||||    
T  41582570 ttaatcattgccacgtcact 41582589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 7280238 - 7280352
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| |||||||||||||| |||||||| ||||||||  || ||||||||  ||||  ||||||||||||||||||||  ||||  | |||||||     
T  7280238 taggggtcatttaaaaaatggtctctgtattctttaatcctgtcattttgccctgtcaaaatttaatcacttaaaaattggtttctcagccaagttaata 7280337  T
Q  108 agtgccacgtcactg 122  Q
    | || ||||||||||    
T  7280338 aatgtcacgtcactg 7280352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 147344 - 147393
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  147344 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1179206 - 1179154
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  1179206 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 1179154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7452209 - 7452157
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  7452209 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 7452157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10781890 - 10781838
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  10781890 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 10781838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13058388 - 13058336
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  13058388 ttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 13058336  T

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Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18831723 - 18831671
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  18831723 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaa 18831671  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23613684 - 23613632
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  23613684 ttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaa 23613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24350838 - 24350786
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  24350838 ttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaa 24350786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35028020 - 35028072
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  35028020 ttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaa 35028072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37248258 - 37248318
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  37248258 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 37248318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37248611 - 37248559
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  37248611 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaa 37248559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43155551 - 43155603
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  43155551 ttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 43155603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48528507 - 48528559
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48528507 ttgcaattaggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaa 48528559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24711133 - 24711188
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  24711133 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 24711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 29320067 - 29320181
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactc--aatccagttaatcagtgcca 114  Q
    |||||||| ||||||||||| || ||||||||  ||| || ||||  ||||| ||||||| || | |||||||| |||  || |||||||||||||| ||    
T  29320067 tttaaaaattggtccctgtaatccttaatcctaacaaattaccctttcaaagtttaatcattttagaattggtccctctcaacccagttaatcagtgtca 29320166  T
Q  115 cgtcactgattagct 129  Q
    |||||||||||||||    
T  29320167 cgtcactgattagct 29320181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 43155898 - 43155847
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattt 43155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 55867519 - 55867468
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  55867519 tgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaa 55867468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 5369266 - 5369221
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  5369266 taggggtcgtttaaaaattggtccctgcattcgttaatccttgcaa 5369221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 11858195 - 11858106
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaat-ggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||| |||| ||| |||||||||| ||||||||||||| |||||||| ||| ||| ||||  ||||  |||||||||||||||||||||    
T  11858195 tgcaaataggagtcatttaaaaaattggtccctgtattccttaatcctggcattttaccctgtcaaaatttaatcacttaaaaattggtc 11858106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16006199 - 16006146
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||    
T  16006199 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttccaat 16006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 40387490 - 40387571
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||||| | |||||||| ||||||||||||||| ||||||| |||| ||||||   |||| |||||||| ||||||    
T  40387490 tgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaa 40387571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10780735 - 10780787
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| || ||||| ||||||||||||    
T  10780735 ttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaa 10780787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10974344 - 10974396
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| || ||||| ||||||||||||    
T  10974344 ttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaa 10974396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15507695 - 15507747
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||||||| |||||| ||||||||||||    
T  15507695 ttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaa 15507747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24411754 - 24411702
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||||||||||    
T  24411754 ttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaa 24411702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24711486 - 24711434
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  24711486 ttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaa 24711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35028404 - 35028284
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||||  |||||||| |||||| | | |||| ||||||||||||||| ||||  ||  | ||||||| |||||| || |||||||   |||    
T  35028404 ttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtcactctcccca 35028305  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  35028304 cttaatcactgccacgtcact 35028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44967091 - 44967139
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 49  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  44967091 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 44967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49879229 - 49879281
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| | | ||||||||||||    
T  49879229 ttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaa 49879281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54086717 - 54086765
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcctt 49  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  54086717 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 54086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44967444 - 44967389
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  44967444 ttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 44967389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 11448131 - 11448021
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtta 104  Q
    |||||||||||||||||||| || || ||||| ||| |||||||||||| || ||||  ||  | ||||||| |||||| || ||||||   ||||||||    
T  11448131 aattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcactatttccagtta 11448032  T
Q  105 atcagtgccac 115  Q
    |||| ||||||    
T  11448031 atcactgccac 11448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 18831374 - 18831431
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||| | ||||| ||||    
T  18831374 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttaccct 18831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46661320 - 46661283
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtatt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  46661320 ttgcaattaggggtcgtttaaaaattggtccctgtatt 46661283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50419043 - 50418990
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||| |||||    
T  50419043 ttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaat 50418990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 54087097 - 54087056
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  54087097 aattaggggtcgtttaaaaattggtccctgtaatcgttaatc 54087056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11108246 - 11108194
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| || ||| |||||||| ||||||||||||    
T  11108246 ttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaa 11108194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 17356325 - 17356273
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||| |||||||||||||| ||||||||||||||| ||||| | |||||||    
T  17356325 caattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaattt 17356273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34765402 - 34765454
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| ||||||||||||||  ||||| |||||||| ||||||||||||    
T  34765402 ttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaa 34765454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34765786 - 34765666
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| |||| | |||| ||| ||||||| ||||||| || |  ||  | ||||||| |||||| || ||| |||   |||    
T  34765786 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctcccca 34765687  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  34765686 cttaatcactgccacgtcact 34765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36008870 - 36008918
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  36008870 aattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaa 36008918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37976175 - 37976227
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||| ||||||||||||| |||| |||||||||| ||||| ||||||    
T  37976175 ttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaa 37976227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5368969 - 5369024
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||| ||||||||||| |||||| |||| ||| ||||||| |||||||    
T  5368969 ttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaattt 5369024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9400894 - 9400839
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| | ||||||||| | | ||||||| |||||||    
T  9400894 ttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaattt 9400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13058059 - 13058106
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||||||| ||||| ||||| ||| |||||||    
T  13058059 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 13058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23613331 - 23613386
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||| | |||||||    
T  23613331 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaattt 23613386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27934554 - 27934609
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| | ||||||||| | | ||||||| |||||||    
T  27934554 ttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattt 27934609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 40388511 - 40388392
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||| ||| | |||||||| |||||||| || ||| ||||||| |||| ||||||   |||| |||||||| |||||| || ||| || |   |||    
T  40388511 tgcaattaagggccatttaaaaattggtccctctaatcgctaatcctggcaaattgccccaacaaaagttaatcatttaaaatttcgtccctgatcacag 40388412  T
Q  102 ttaatcagtgccacgtcact 121  Q
    ||||||| ||||||||||||    
T  40388411 ttaatcattgccacgtcact 40388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16605624 - 16605754
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||| ||| |||||||| | ||||||||| |||| || |||  |||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  16605624 ttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaaaatttcgtccctcccccca 16605723  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||||| |||||||||||| |||||||||    
T  16605724 cttaatcactgccacgtcactaattagctga 16605754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 36009210 - 36009172
Alignment:
Q  10 ggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  36009210 ggggtcgtttaaaaattggtccctgtaatcgttaatcct 36009172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 41583636 - 41583518
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    |||||||||||||| |||||||| || |  ||||||||| ||||||| |||| ||||||   |||| |||||||| |||||| || ||| |||    ||     
T  41583636 tgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcttctcac 41583537  T
Q  102 ttaatcagtgccacgtcac 120  Q
    ||||||| |||||||||||    
T  41583536 ttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 32063741 - 32063660
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||||||| |||||||| ||||  ||||| |||||||| || |||| || ||||  ||||| ||||||| ||||||    
T  32063741 tgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaa 32063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53129912 - 53129851
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctc 62  Q
    ||||||| |||||||||||||||| || |||  ||| ||| ||||||||||||||| |||||    
T  53129912 ttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctc 53129851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 56014778 - 56014871
Alignment:
Q  32 ctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgatt 125  Q
    ||||| ||| ||||||| |||| ||||||   |||| |||||||| |||||| || ||| ||||   |||||||||| ||||||||||||||||    
T  56014778 ctgtaatcgctaatcctggcaaattgcccctgcaaacgttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatt 56014871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10408293 - 10408233
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  10408293 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 10408233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17355947 - 17355999
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| ||||  ||||||||| ||||| ||||||    
T  17355947 ttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaa 17355999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 29321311 - 29321191
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||| ||||| |||||||| ||||  || || |||||||| || |||| || || |  ||||  ||||||| |||| |||||||  ||||| | |    
T  29321311 ttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattaccttttcaaattttaatcatttaagaattggttcctcaaccta 29321212  T
Q  101 gttaatcagtgccacgtcact 121  Q
    |||||||| ||||||||||||    
T  29321211 gttaatcactgccacgtcact 29321191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39539324 - 39539272
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| |||||  |||| |||||||| |||||||    
T  39539324 ttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaa 39539272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49879582 - 49879522
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| || || ||||| ||| |||||||  |||||| ||||    
T  49879582 ttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttaccct 49879522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52909275 - 52909335
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||| ||||| ||||| ||||| ||| |||||||  |||||| ||||    
T  52909275 ttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttaccct 52909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54435503 - 54435451
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||||||| || ||| |||| |||| |||||||||||    
T  54435503 ttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaa 54435451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54858964 - 54858904
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | |||| |||| ||||||||||| ||||||| ||||    
T  54858964 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttaccct 54858904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 13300310 - 13300170
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||| |||||||||||| ||||| ||||||||  |||||||||||| || | ||  ||    ||||| |||||||||||| ||  |||| |||    
T  13300310 ttgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataacttaaaaattgatccttcaaccca 13300211  T
Q  101 gttaatcagtgccacgtcactgattagctgatgtaacttgc 141  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  13300210 cttaatcagtgccacgtcactgattagctgatgtaacttgc 13300170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 34850471 - 34850341
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||  ||||  ||||||| |||||| ||  || |||   |||    
T  34850471 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcatccctctcccca 34850372  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||||| ||||||||||||||||||||||    
T  34850371 cttaatcactgccacgtcactgattagctga 34850341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 42267595 - 42267484
Alignment:
Q  12 ggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtg 111  Q
    |||| |||||||||||||| |||||||| |||||||| ||| |||||||| |||||  |||||||||| |||||||||| ||||  ||||||||| | ||    
T  42267595 ggtcatttaaaaaatggtctctgtattccttaatcctggcattttgccctaccaaaatttaatcacttcaaaattggtccctcagcccagttaattaatg 42267496  T
Q  112 ccacgtcactga 123  Q
    ||||||| ||||    
T  42267495 ccacgtcgctga 42267484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 44522170 - 44522297
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||||||||| || |||||||| ||| ||||||| ||||||||||| |||| ||  |||   |||| ||||||| |||| ||||||||  |||| ||||    
T  44522170 tgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatcatttaagaattggtctttcaacccag 44522269  T
Q  102 ttaatcagtgccacgtcactgattagct 129  Q
    ||||||||||||| ||||||||||||||    
T  44522270 ttaatcagtgccaagtcactgattagct 44522297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 22103638 - 22103752
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| ||||||||||||||| ||||||  |||||| | ||| |||||||| |||||  | ||||||||||||||||||| ||||  |||||||||     
T  22103638 taggggtcatttaaaaaatggtccatgtattttttaatcttggcattttgcccttccaaaattgaatcacttaaaaattggtccctcagcccagttaatg 22103737  T
Q  108 agtgccacgtcactg 122  Q
    | |||||||||||||    
T  22103738 actgccacgtcactg 22103752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9443594 - 9443725
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||| |||||||| |||||||||||||| |||||||| |||||||| ||| |||| |||||||||  ||||||| |||||| |||||| |||   |||    
T  9443594 ttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggcattttgtcctcccaaaatttaatcatttaaaatttggtccctcccccca 9443693  T
Q  101 gttaatcagtgccacgtcact-gattagctga 131  Q
     ||||||| || || |||||| ||||||||||    
T  9443694 cttaatcattgtcaagtcactagattagctga 9443725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 31198212 - 31198129
Alignment:
Q  118 cactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcatcttctcccttttccctc-tcgtttccttgcag 200  Q
    |||||| ||| ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| | ||||||||||||    
T  31198212 cactgaatagttgatgtaacttgcgaaaagaccaaaatacccctgtcttcatcttcttccttttccctcttagtttccttgcag 31198129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34849033 - 34849160
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||| || ||||  ||||  ||||||| |||||| || ||| |||   ||     
T  34849033 ttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcgtccctctcccct 34849132  T
Q  101 gttaatcagtgccacgtcactgattagc 128  Q
     ||||||| ||||||||||| |||||||    
T  34849133 cttaatcactgccacgtcaccgattagc 34849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6367584 - 6367704
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  6367584 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 6367683  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  6367684 cttaatcactgccacgtcact 6367704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37578214 - 37578266
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  37578214 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 37578266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25647906 - 25647961
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  25647906 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattt 25647961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 183246 - 183295
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  183246 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 183295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 10304260 - 10304179
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||| |||||||| ||||||||||||||  ||||||||||||| || |||||||||| |||||||  ||||||| ||||||    
T  10304260 tgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaatcatttaaaa 10304179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40435367 - 40435424
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgc 58  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||    
T  40435367 ttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttgcattttgc 40435424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42533046 - 42533099
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  42533046 ttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaat 42533099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4960562 - 4960682
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| || ||  |||||||| ||||||||||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  4960562 ttgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttccca 4960661  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  4960662 cttaatcactgccacgtcact 4960682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6367968 - 6367916
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  6367968 ttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 6367916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26024798 - 26024746
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  26024798 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaa 26024746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30711733 - 30711681
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  30711733 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 30711681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32917666 - 32917614
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  32917666 ttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaa 32917614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43759228 - 43759176
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  43759228 ttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaa 43759176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47999145 - 47999197
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  47999145 ttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaa 47999197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48691170 - 48691222
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  48691170 ttgcaattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaa 48691222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49723132 - 49723080
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  49723132 ttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 49723080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 19227255 - 19227144
Alignment:
Q  11 gggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagt 110  Q
    ||||| |||||||||| |||| ||||||| ||||||||  || |||||||| |||||  ||||||||||||||||||||   |||  ||||||| | | |    
T  19227255 gggtcatttaaaaaatagtccttgtattccttaatcctgacattttgccctgccaaaatttaatcacttaaaaattggttcatcatcccagttatttact 19227156  T
Q  111 gccacgtcactg 122  Q
    ||||||||||||    
T  19227155 gccacgtcactg 19227144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 22103905 - 22103787
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| ||||||||||||||| ||||||  ||||||||   | ||||||||  ||||  |||||||||||||| || ||| |||  |||| ||||||    
T  22103905 taggggtcatttaaaaaatggtccatgtattttttaatcctgctattttgccctgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatc 22103806  T
Q  108 agtgccacgtcactgatta 126  Q
    | |||||||||||| ||||    
T  22103805 actgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 10303946 - 10304027
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||| |||| ||| ||||||||||| ||  |||||||||||||||| |||||||||||| |||||  ||||||| ||||||    
T  10303946 tgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgcccttccaaaatttaatcatttaaaa 10304027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 13246137 - 13246048
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaat 106  Q
    ||||||||||||||| ||||||| |||||||| ||| ||| |||| |||||  ||||| || |||||||||||| ||||| | |||||||    
T  13246137 tttaaaaaatggtccatgtattccttaatcctagcatttttccctaccaaaatttaatgacataaaaattggtccctcaaccgagttaat 13246048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35152736 - 35152683
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  35152736 ttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaat 35152683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40772865 - 40772812
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||||||||||||||| ||||  |||||||||||||| |||||||||||||    
T  40772865 ttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatccttgcaat 40772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1103867 - 1103815
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  1103867 ttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 1103815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13914090 - 13914142
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||||||    
T  13914090 ttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaa 13914142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17661874 - 17661925
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  17661874 ttgcaattaggggtcgtttaaaaattggt-cctgtattcgctaatccttgcaa 17661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17662256 - 17662136
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||| ||||||||||||||| |||| ||| || ||||||||||| ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  17662256 ttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttccca 17662157  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  17662156 cttaatcactgccacgtcact 17662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23209733 - 23209673
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||| ||||||| ||||    
T  23209733 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccct 23209673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26024445 - 26024505
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||| ||||||| ||||    
T  26024445 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccct 26024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34464471 - 34464591
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||| | ||||||| ||||  ||| | ||||||| |||||| || |||| |  | | |    
T  34464471 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaatttcgtcatttgaccaa 34464570  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  34464571 cttaatcactgccacgtcact 34464591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35473653 - 35473705
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||    
T  35473653 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36694304 - 36694356
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||||||||||    
T  36694304 ttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaa 36694356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36710405 - 36710457
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||||||||||    
T  36710405 ttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaa 36710457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 42267326 - 42267450
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccag 101  Q
    ||||| |||||||| |||||||| |||||||||||||| ||||||||  ||||||| ||| |||||  ||||||| |||| | || ||| |||   |||     
T  42267326 tgcaaataggggtcatttaaaaattggtccctgtattctttaatcctgacaatttgtcctgccaaaatttaatcatttaatatttcgtctctctccccac 42267425  T
Q  102 ttaatcagtgccacgtcactgatta 126  Q
    ||||||| | |||||||||| ||||    
T  42267426 ttaatcactaccacgtcactaatta 42267450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 46899084 - 46899135
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||| |||||| |||||||| |||| |||||||    
T  46899084 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaa 46899135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 4960913 - 4960863
Alignment:
Q  3 gcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  4960913 gcaattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaa 4960863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24009597 - 24009647
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgc 51  Q
    |||||||||||||||||||||||| |||||| |||||||  ||||||||||    
T  24009597 ttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgc 24009647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 13245888 - 13245997
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacg 116  Q
    |||||||| |||||| ||||||| |||||||| ||| ||| |||| |||||  |||||||||||||| || ||| |||   ||| ||||||| || ||||    
T  13245888 tttaaaaattggtccttgtattccttaatcctggcattttaccctgccaaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacg 13245987  T
Q  117 tcactgatta 126  Q
    ||||| ||||    
T  13245988 tcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 17691248 - 17691293
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  17691248 taggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaa 17691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 41099136 - 41099087
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||||    
T  41099136 caattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 41099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 1841856 - 1841812
Alignment:
Q  9 aggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||| || |||||||||||| ||||||||||||    
T  1841856 aggggtcgtttaaaaattgttccctgtattcgctaatccttgcaa 1841812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14879364 - 14879312
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| ||||| || |||||| ||||||||||||    
T  14879364 ttgcaattagggatcgtttaaaaattggtctctatattcgctaatccttgcaa 14879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17692591 - 17692539
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||||||  |||||||||  ||| ||||||||||||    
T  17692591 ttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaa 17692539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19018035 - 19017975
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||  ||||||||||||| |||||| |||||||| ||||||| ||||||| ||||    
T  19018035 ttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttaccct 19017975  T

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Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34464855 - 34464735
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||| ||||||||| |||||| |||| ||| ||||| | ||||||| ||||  ||| | ||||||| |||||| || ||| |||   |||    
T  34464855 ttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaattttgtccctctcccca 34464756  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||| ||||||    
T  34464755 cttaatcactgccatgtcact 34464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37578598 - 37578478
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||| ||||||||||||||| ||||   |||| ||| ||||||| ||||||| ||||  ||  | ||||||| |||||| || |||||||   |||    
T  37578598 ttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttcgtcactctcccca 37578499  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  37578498 cttaatcactgccacgtcact 37578478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40714466 - 40714526
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||| ||||||| ||||    
T  40714466 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaccct 40714526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41098755 - 41098815
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||| ||||| ||| |||||||  |||||| ||||    
T  41098755 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttaccct 41098815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40772529 - 40772576
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    ||||||||| |||||||||||||| ||||||||||| ||| |||||||    
T  40772529 ttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcct 40772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 47999494 - 47999443
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| | |||||||    
T  47999494 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaattt 47999443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 183588 - 183542
Alignment:
Q  10 ggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  183588 ggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaattt 183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31197088 - 31197134
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||| |||||||| | ||| |||||||||||||||||    
T  31197088 tgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcct 31197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24905189 - 24905278
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||||||||| ||| |||||||| | ||||||||| | | |||||||||||||||  |||  |||  |||||||| |||||| ||||||    
T  24905189 ttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtc 24905278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5734032 - 5734083
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| | |||| ||| ||||||||||||    
T  5734032 ttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttgcaa 5734083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7820976 - 7821036
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||||||| ||||| || | ||||||||| ||| |||||||| |||||| ||||    
T  7820976 ttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttaccct 7821036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14878993 - 14879053
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||| | |||| ||| ||||| | ||||||| ||||    
T  14878993 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttaccct 14879053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17188976 - 17189036
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  17188976 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 17189036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19515841 - 19515885
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaat 45  Q
    |||||||||||||||||||||||| |||||  |||| ||||||||    
T  19515841 ttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaat 19515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40210392 - 40210444
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||| ||||||||||||  |||||  |||||||| ||||||||||||    
T  40210392 ttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaa 40210444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40210776 - 40210656
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||| |||||||||| |||||  |||| ||| |||| || ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  40210776 ttgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 40210677  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  40210676 cttaatcactgccacgtcact 40210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 46163056 - 46163112
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||| |||||| |||| ||| |||||||  |||||| ||||    
T  46163056 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttaccct 46163112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 30459462 - 30459566
Alignment:
Q  70 ttaatcacttaaaaattggtcactcaatccagttaatcagtgccacgtcactgattagctgatgtaacttgcaaaaagaccaaaatacccttggcttcat 169  Q
    |||||||||||||||||||||  |||| ||| |||| ||||| || |||||||||||||||||||||||||  ||   |||||||||||| || ||||||    
T  30459462 ttaatcacttaaaaattggtccttcaacccacttaaccagtgtcatgtcactgattagctgatgtaacttgtgaattaaccaaaatacccctgacttcat 30459561  T
Q  170 cttct 174  Q
    |||||    
T  30459562 cttct 30459566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20385590 - 20385720
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |   ||  |||   ||||||| |||||| || ||| || |  |||    
T  20385590 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtccctgagccca 20385689  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
    |||||| | ||||||||||||||||||||||    
T  20385690 gttaattactgccacgtcactgattagctga 20385720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20386836 - 20386706
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |  |||| |||   ||||||| |||||| || ||| || |  |||    
T  20386836 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcatttaaaatttcgtccctgagccca 20386737  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
    |||||  | |||||| |||||||||||||||    
T  20386736 gttaactactgccacatcactgattagctga 20386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23663567 - 23663616
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23663567 ttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttg 23663616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8316675 - 8316727
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8316675 ttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaa 8316727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 2535955 - 2535874
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| || ||||  ||||| ||||||| ||||||    
T  2535955 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaa 2535874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 31873304 - 31873223
Alignment:
Q  2 tgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    ||||| || ||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||  ||||||| ||||||    
T  31873304 tgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaatcatttaaaa 31873223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38956078 - 38956029
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  38956078 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttg 38956029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1425075 - 1425127
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  1425075 ttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaa 1425127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 4406062 - 4405946
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagtta 104  Q
    |||||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||  ||| | ||||||| |||||| || ||| |||   ||| |||    
T  4406062 aattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttcgtccctcttcccactta 4405963  T
Q  105 atcagtgccacgtcact 121  Q
    |||| || |||||||||    
T  4405962 atcactgtcacgtcact 4405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9337048 - 9337168
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||| |||| ||| |||| |||||| |||| ||||||||  | |||| || ||||  ||||| ||||||| |||| |||||||| ||||| | |    
T  9337048 ttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaagaattggtccctcaaccta 9337147  T
Q  101 gttaatcagtgccacgtcact 121  Q
    |||||||| ||||||||||||    
T  9337148 gttaatcactgccacgtcact 9337168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31608919 - 31608859
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||| ||||    
T  31608919 ttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttaccct 31608859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38862969 - 38862917
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  38862969 ttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 38862917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12273259 - 12273213
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatcc 47  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  12273259 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcc 12273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35756989 - 35756936
Alignment:
Q  1 ttgcaattagggg-tcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  35756989 ttgcaattagggggtcgtttaaaaattggtctctgtattcgttaatccttgcaa 35756936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8316994 - 8316934
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||| ||||||| ||||    
T  8316994 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccct 8316934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10749914 - 10749813
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||| || |||||||| |||||| |||| |||||||||||  ||| || ||||  |||| |||||||||||  ||||||||| ||||| |||    
T  10749914 ttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattacccttgcaaacgttaatcactt--aaattggtccctcaaccca 10749817  T
Q  101 gtta 104  Q
    ||||    
T  10749816 gtta 10749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12198972 - 12199024
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  12198972 ttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaa 12199024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12443400 - 12443452
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  12443400 ttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaa 12443452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13186465 - 13186413
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||||||||||    
T  13186465 ttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaa 13186413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23663920 - 23663860
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||| ||||| ||| ||||||| ||||||| ||||    
T  23663920 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccct 23663860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23698646 - 23698590
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||| ||||||| ||||    
T  23698646 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccct 23698590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33357520 - 33357572
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| || ||| |||||||| ||||||||||||    
T  33357520 ttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaa 33357572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39071698 - 39071758
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||| ||||    
T  39071698 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttaccct 39071758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40317986 - 40318038
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  40317986 ttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaa 40318038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 20050112 - 20050187
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaa 83  Q
    |||||||| |||||||| |||||| ||||||| ||||| || ||| |||||||| |||||  ||||||||||||||    
T  20050112 taggggtcatttaaaaattggtccatgtattccttaattctggcattttgccctgccaaaatttaatcacttaaaa 20050187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 13084877 - 13084775
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacg 116  Q
    |||||||| |||||| ||||||| |||||| | | | |||||||| |||||  ||||||||||||||||||||| | ||| ||| ||||| | ||||| |    
T  13084877 tttaaaaattggtccatgtattccttaatcttggaattttgccctgccaaaatttaatcacttaaaaattggtcccccaacccaattaattactgccatg 13084778  T
Q  117 tca 119  Q
    |||    
T  13084777 tca 13084775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 9499645 - 9499763
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacg 116  Q
    ||||||||||||||| ||||||| ||||| || ||| |||| | || ||||| ||||||| |||||| |||||| | |   ||| | ||||| |||||||    
T  9499645 tttaaaaaatggtccatgtattccttaattctggcattttgtcatcgcaaagtttaatcatttaaaatttggtccccc--cccactgaatcactgccacg 9499742  T
Q  117 tcact-gattagctgatgtaa 136  Q
    ||||| |||||||||||||||    
T  9499743 tcactagattagctgatgtaa 9499763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34177372 - 34177327
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttg 50  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||    
T  34177372 aattaggggtcgtttaaaaattggtccttgtattcgctaatccttg 34177327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7295333 - 7295281
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| || |||||||||||  |||||||||||||| ||||||||||||    
T  7295333 ttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaa 7295281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12272940 - 12272992
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| ||||| ||||| ||| ||||||||||||    
T  12272940 ttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaa 12272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34061734 - 34061674
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||  |||||||||||| || ||| |||||||| |||||||||||| |||||||    
T  34061734 ttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgccct 34061674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36186127 - 36186175
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||| |||||||  ||||||||||||||| ||||||||||||    
T  36186127 aattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaa 36186175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 36325259 - 36325311
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||||||||||||| | ||||||||| | ||||||||| |||||||    
T  36325259 caattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaattt 36325311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39072047 - 39071996
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||| | |||||||||||||| ||||||||||||||| ||||||||||||    
T  39072047 ttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaa 39071996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 9065691 - 9065734
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatcct 48  Q
    |||||||||||||||||||| |||||||| || |||||||||||    
T  9065691 aattaggggtcgtttaaaaattggtccctataatcgttaatcct 9065734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11674717 - 11674772
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||| |||||||||||| | ||||||||| | ||||||||| |||||||    
T  11674717 ttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaattt 11674772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44664530 - 44664585
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||| |||||||    
T  44664530 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaattt 44664585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 11291056 - 11291137
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggt 89  Q
    |||| ||| ||||||||||||| | ||||||| ||||||||   | |||||| | |||||  ||||||||||||||||||||    
T  11291056 taggagtcatttaaaaaatggttcttgtattccttaatcctgatattttgccatgccaaaatttaatcacttaaaaattggt 11291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 12199308 - 12199259
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||| |||||||||||| |||||| |||| ||| |||||||||||||    
T  12199308 aattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaat 12199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 12443736 - 12443687
Alignment:
Q  5 aattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaat 54  Q
    ||||||| |||||||||||| |||||| |||| ||| |||||||||||||    
T  12443736 aattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaat 12443687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16388605 - 16388650
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatc 46  Q
    |||||||||||||||||||||||| |||| ||| |||||| |||||    
T  16388605 ttgcaattaggggtcgtttaaaaattggttcctatattcgctaatc 16388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23507831 - 23507742
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    ||||||||||| ||| ||||||||   ||||||||| | | ||||||||||||||| ||||  |||  |||||||| |||||| ||||||    
T  23507831 ttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatttaaaatttggtc 23507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7983450 - 7983510
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  7983450 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 7983510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10445739 - 10445679
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  10445739 ttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 10445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13186082 - 13186202
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    |||||||||||| ||||||||||| |||| | |||| ||| |||||||  |||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  13186082 ttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccca 13186181  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  13186182 cttaatcactgccacgtcact 13186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15229953 - 15230013
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||| ||||||| ||||||| ||||    
T  15229953 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccct 15230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 16388932 - 16388812
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||||| |||||||| |||| | |||| | | ||||||| ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  16388932 ttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 16388833  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  16388832 cttaatcactgccacgtcact 16388812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34685663 - 34685612
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||| ||||||||||| |||| | |||||||| ||||||||||||    
T  34685663 ttgcaattagggatcgtttaaaaattggt-cttgtattcgctaatccttgcaa 34685612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40318370 - 40318310
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||| ||||||||| | |||| |||| ||| ||||||| ||||||| ||||    
T  40318370 ttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttaccct 40318310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 9493 - 9388
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacg 116  Q
    ||||||||||||||||| ||||| |||||||| | | |||| |||  ||||  ||||||||||||||||||||| ||||  ||||||||| | |||||||    
T  9493 tttaaaaaatggtccctatattccttaatcctggtattttgtcctgtcaaaatttaatcacttaaaaattggtccctcagcccagttaattactgccacg 9394  T
Q  117 tcactg 122  Q
    ||||||    
T  9393 tcactg 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6485 - 6433
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  6485 ttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 6433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 24745 - 24622
Alignment:
Q  8 taggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatc 107  Q
    |||||||| |||||||| |||||| | |||| ||||||||| ||||| |  ||||| |||| ||||||| |||||| || ||| || |  |||||||||     
T  24745 taggggtcatttaaaaattggtccttatatttgttaatcctggcaatctatcctccaaaagtttaatcatttaaaattttgtctctgagcccagttaatt 24646  T
Q  108 agtgccacgtcactgattagctga 131  Q
    | ||||||||||||||||||||||    
T  24645 actgccacgtcactgattagctga 24622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 239957 - 239827
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||| ||||||||| |||||||| |||| |||||| ||| ||||||| |||| || |||| |||||| ||||||| |||||| || ||| ||  | |||    
T  239957 ttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttcgtccctacaccca 239858  T
Q  101 gttaatcagtgccacgtcactgattagctga 131  Q
     ||||| | |||||| |||||||||||||||    
T  239857 cttaattactgccacatcactgattagctga 239827  T

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Target: scaffold0100 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 31058 - 31163
Alignment:
Q  17 tttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatccagttaatcagtgccacg 116  Q
    ||||||||||||| | ||||||| ||||| || |||||||| |||  ||||  |||||||||||||||||| || |||| |||||||||| | || ||||    
T  31058 tttaaaaaatggttcatgtattccttaattctggcaatttgtcctgtcaaaatttaatcacttaaaaattgatccctcagtccagttaattactgtcacg 31157  T
Q  117 tcactg 122  Q
    ||||||    
T  31158 tcactg 31163  T

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Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 139694 - 139749
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  139694 ttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattt 139749  T

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Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 140047 - 139995
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||| |||||||    
T  140047 ttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaa 139995  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 68987 - 69107
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtcactcaatcca 100  Q
    ||||||||||||||| |||||||| ||||||||||| ||  ||||||| ||||||| ||||  ||  | ||||||| |||||| || ||| |||   |||    
T  68987 ttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 69086  T
Q  101 gttaatcagtgccacgtcact 121  Q
     ||||||| ||||||||||||    
T  69087 cttaatcactgccacgtcact 69107  T

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Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 69371 - 69319
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||  |||||||||||| ||||||||||||||| ||||||||||||    
T  69371 ttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaa 69319  T

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Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 6523 - 6610
Alignment:
Q  3 gcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaaggttaatcacttaaaaattggtc 90  Q
    |||| |||||||| ||||||||||||||| ||||||  |||||||| ||| ||||| ||||||||  ||||||  |||||| ||||||    
T  6523 gcaaataggggtcatttaaaaaatggtccatgtatttcttaatcctggcattttgcgctcccaaattttaatcttttaaaatttggtc 6610  T

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Target: scaffold0775 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4987 - 5036
Alignment:
Q  4 caattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  4987 caattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaa 5036  T

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Target: scaffold0388 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12643 - 12583
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||| ||||||| ||||    
T  12643 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaccct 12583  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19879 - 19931
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 53  Q
    ||||||||| |||||||||||||| ||||||||||  ||| ||||||||||||    
T  19879 ttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaa 19931  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1791 - 1851
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||| | ||||||| ||||    
T  1791 ttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttaccct 1851  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2147 - 2114
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  2147 ttgcaattaggggtcgtttaaaaattggtccctg 2114  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14796 - 14741
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaattt 56  Q
    |||||||||||||||||||||||| ||||| || || ||| ||||||| |||||||    
T  14796 ttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaattt 14741  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11544 - 11484
Alignment:
Q  1 ttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccct 61  Q
    ||||||||||| ||| |||||||| | |||| |||| ||||||||||| ||||||| ||||    
T  11544 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttaccct 11484  T

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