View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21656_low_39 (Length: 326)

Name: NF21656_low_39
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21656_low_39
NF21656_low_39
[»] chr1 (80 HSPs)
chr1 (53-265)||(23319011-23319223)
chr1 (52-265)||(18057645-18057858)
chr1 (136-265)||(21255906-21256035)
chr1 (52-265)||(30803039-30803258)
chr1 (136-265)||(31084251-31084380)
chr1 (102-265)||(37642966-37643130)
chr1 (52-238)||(45890459-45890642)
chr1 (136-265)||(10498102-10498231)
chr1 (126-265)||(23277023-23277163)
chr1 (136-270)||(20506376-20506509)
chr1 (208-265)||(35197351-35197408)
chr1 (265-311)||(37642882-37642928)
chr1 (208-253)||(16116723-16116768)
chr1 (104-161)||(16116987-16117044)
chr1 (104-161)||(35197062-35197119)
chr1 (265-309)||(2741499-2741543)
chr1 (265-309)||(14389994-14390038)
chr1 (265-309)||(17893122-17893166)
chr1 (265-309)||(18057430-18057474)
chr1 (265-309)||(23319261-23319305)
chr1 (265-309)||(45849158-45849202)
chr1 (265-311)||(15588619-15588665)
chr1 (265-307)||(24368568-24368610)
chr1 (265-311)||(31529021-31529067)
chr1 (265-309)||(12796579-12796623)
chr1 (265-309)||(17811233-17811277)
chr1 (265-309)||(18057563-18057607)
chr1 (269-309)||(19216548-19216588)
chr1 (265-309)||(20506542-20506586)
chr1 (265-309)||(21256073-21256117)
chr1 (265-309)||(28322633-28322677)
chr1 (265-309)||(33157130-33157174)
chr1 (265-309)||(35197446-35197490)
chr1 (265-309)||(51420848-51420892)
chr1 (120-167)||(4097152-4097199)
chr1 (120-167)||(8401445-8401492)
chr1 (265-308)||(16116636-16116679)
chr1 (265-300)||(30788779-30788814)
chr1 (272-311)||(51801081-51801120)
chr1 (265-299)||(23921171-23921205)
chr1 (121-165)||(11422526-11422570)
chr1 (272-308)||(12070478-12070514)
chr1 (105-145)||(20481487-20481527)
chr1 (120-160)||(23174445-23174485)
chr1 (265-309)||(23277195-23277239)
chr1 (265-309)||(31084169-31084213)
chr1 (265-309)||(45890371-45890415)
chr1 (265-296)||(16116472-16116503)
chr1 (120-167)||(21641637-21641684)
chr1 (265-300)||(33097811-33097846)
chr1 (265-308)||(44261070-44261113)
chr1 (265-295)||(10497901-10497931)
chr1 (265-295)||(11354477-11354507)
chr1 (49-87)||(11422584-11422622)
chr1 (265-295)||(12070576-12070606)
chr1 (265-295)||(14229327-14229357)
chr1 (265-295)||(18952552-18952582)
chr1 (265-295)||(21256205-21256235)
chr1 (265-295)||(23277332-23277362)
chr1 (120-150)||(23921014-23921044)
chr1 (265-295)||(23921303-23921333)
chr1 (265-295)||(29945265-29945295)
chr1 (265-295)||(31084049-31084079)
chr1 (265-295)||(32595152-32595182)
chr1 (265-295)||(37642766-37642796)
chr1 (267-309)||(42133996-42134038)
chr1 (272-309)||(18928907-18928944)
chr1 (120-149)||(43452644-43452673)
chr1 (276-309)||(45890238-45890271)
chr1 (272-309)||(51904750-51904787)
chr1 (265-309)||(6708467-6708511)
chr1 (267-295)||(12796477-12796505)
chr1 (265-293)||(18928828-18928856)
chr1 (265-309)||(18952457-18952501)
chr1 (273-309)||(19850641-19850677)
chr1 (265-305)||(30802961-30803001)
chr1 (265-309)||(35754718-35754762)
chr1 (265-309)||(44687890-44687934)
chr1 (265-309)||(46590608-46590652)
chr1 (265-309)||(47693716-47693760)
[»] chr5 (49 HSPs)
chr5 (53-265)||(13363630-13363842)
chr5 (62-265)||(23334716-23334918)
chr5 (95-265)||(18464391-18464568)
chr5 (66-161)||(16667667-16667762)
chr5 (208-265)||(16667978-16668035)
chr5 (52-167)||(23948517-23948630)
chr5 (265-309)||(16552297-16552341)
chr5 (265-309)||(22830738-22830782)
chr5 (265-309)||(23334956-23335000)
chr5 (265-309)||(35662183-35662227)
chr5 (93-145)||(37857493-37857545)
chr5 (265-309)||(42512630-42512674)
chr5 (267-309)||(5630221-5630263)
chr5 (265-309)||(3340729-3340773)
chr5 (265-309)||(7286904-7286948)
chr5 (265-309)||(11660843-11660887)
chr5 (265-309)||(35915869-35915913)
chr5 (265-306)||(15059586-15059627)
chr5 (272-309)||(33868737-33868774)
chr5 (265-309)||(703780-703824)
chr5 (265-309)||(4675480-4675524)
chr5 (269-309)||(8949631-8949671)
chr5 (265-309)||(11376431-11376475)
chr5 (265-309)||(13363548-13363592)
chr5 (265-309)||(16552429-16552473)
chr5 (265-309)||(20134249-20134293)
chr5 (265-309)||(23155676-23155720)
chr5 (265-309)||(23335087-23335131)
chr5 (265-309)||(25016483-25016527)
chr5 (265-309)||(25016616-25016660)
chr5 (265-309)||(33857404-33857448)
chr5 (265-309)||(39086656-39086700)
chr5 (93-144)||(7183870-7183921)
chr5 (104-143)||(39055809-39055848)
chr5 (265-295)||(8949512-8949542)
chr5 (265-295)||(16668206-16668236)
chr5 (267-309)||(22695490-22695532)
chr5 (265-295)||(23155573-23155603)
chr5 (48-89)||(13553125-13553166)
chr5 (268-309)||(16668076-16668117)
chr5 (276-309)||(34329796-34329829)
chr5 (268-309)||(39166204-39166245)
chr5 (273-309)||(4951175-4951211)
chr5 (56-100)||(11660792-11660836)
chr5 (265-309)||(13363416-13363460)
chr5 (267-295)||(15059481-15059509)
chr5 (265-309)||(20696178-20696222)
chr5 (267-311)||(23155791-23155835)
chr5 (265-309)||(39861629-39861673)
[»] chr7 (57 HSPs)
chr7 (52-265)||(33798570-33798782)
chr7 (66-265)||(5758146-5758345)
chr7 (19-265)||(30430610-30430845)
chr7 (53-265)||(46024886-46025108)
chr7 (136-265)||(48830448-48830577)
chr7 (66-265)||(32091380-32091590)
chr7 (156-265)||(24360614-24360723)
chr7 (210-265)||(27334857-27334912)
chr7 (102-170)||(27334716-27334784)
chr7 (105-167)||(16932537-16932599)
chr7 (105-167)||(16937920-16937982)
chr7 (208-262)||(44140390-44140444)
chr7 (208-253)||(12286015-12286060)
chr7 (108-164)||(46345895-46345951)
chr7 (106-159)||(44140103-44140156)
chr7 (265-309)||(6620748-6620792)
chr7 (265-309)||(24360532-24360576)
chr7 (265-309)||(30430528-30430572)
chr7 (265-309)||(32604771-32604815)
chr7 (102-170)||(39006871-39006939)
chr7 (265-309)||(44426749-44426793)
chr7 (267-309)||(32091298-32091340)
chr7 (267-309)||(48830366-48830408)
chr7 (265-309)||(6846629-6846673)
chr7 (265-309)||(30430395-30430439)
chr7 (265-309)||(31365420-31365464)
chr7 (265-309)||(38837590-38837634)
chr7 (265-309)||(39007243-39007287)
chr7 (265-309)||(41065818-41065862)
chr7 (265-309)||(46004391-46004435)
chr7 (208-265)||(39007108-39007162)
chr7 (212-265)||(46346039-46346089)
chr7 (272-309)||(46024804-46024841)
chr7 (265-298)||(46346170-46346203)
chr7 (265-309)||(5728830-5728874)
chr7 (93-145)||(6796732-6796784)
chr7 (265-309)||(7843569-7843613)
chr7 (265-309)||(25779483-25779527)
chr7 (265-309)||(27334993-27335037)
chr7 (265-309)||(34876171-34876215)
chr7 (105-145)||(45402228-45402268)
chr7 (265-309)||(46024671-46024715)
chr7 (120-159)||(46572617-46572656)
chr7 (120-167)||(48692004-48692051)
chr7 (265-295)||(5728728-5728758)
chr7 (265-295)||(24360413-24360443)
chr7 (265-295)||(25779364-25779394)
chr7 (265-295)||(32090062-32090092)
chr7 (265-295)||(34876228-34876258)
chr7 (265-295)||(48830247-48830277)
chr7 (52-89)||(11732037-11732074)
chr7 (272-309)||(33798488-33798525)
chr7 (267-300)||(44140526-44140559)
chr7 (52-89)||(46572569-46572606)
chr7 (265-309)||(5758064-5758108)
chr7 (53-89)||(15973856-15973892)
chr7 (93-141)||(21405386-21405434)
[»] chr4 (87 HSPs)
chr4 (52-265)||(21097968-21098181)
chr4 (47-265)||(22180196-22180424)
chr4 (66-265)||(50562679-50562879)
chr4 (76-265)||(18924113-18924312)
chr4 (56-265)||(4169255-4169473)
chr4 (93-265)||(30779453-30779634)
chr4 (126-265)||(30358686-30358826)
chr4 (111-265)||(27765115-27765278)
chr4 (151-265)||(1728705-1728816)
chr4 (181-265)||(20862398-20862482)
chr4 (207-264)||(9552119-9552176)
chr4 (208-265)||(9553144-9553201)
chr4 (66-159)||(48076921-48077014)
chr4 (208-265)||(48077244-48077301)
chr4 (93-167)||(25573252-25573326)
chr4 (208-265)||(6385664-6385721)
chr4 (103-223)||(36621025-36621134)
chr4 (101-164)||(24687280-24687343)
chr4 (208-265)||(25573529-25573583)
chr4 (219-265)||(49137277-49137323)
chr4 (102-159)||(6385392-6385449)
chr4 (264-309)||(43852176-43852221)
chr4 (265-309)||(22180584-22180628)
chr4 (266-309)||(16474873-16474916)
chr4 (265-307)||(9553094-9553136)
chr4 (265-311)||(21097752-21097798)
chr4 (221-270)||(9553011-9553060)
chr4 (265-309)||(4169040-4169084)
chr4 (265-309)||(12722788-12722832)
chr4 (93-145)||(20581616-20581668)
chr4 (265-309)||(22180451-22180495)
chr4 (265-309)||(30358604-30358648)
chr4 (265-309)||(38010484-38010528)
chr4 (265-309)||(38563855-38563899)
chr4 (265-309)||(49137361-49137405)
chr4 (265-309)||(50644470-50644514)
chr4 (265-309)||(53865193-53865237)
chr4 (120-167)||(638948-638995)
chr4 (102-149)||(9551607-9551654)
chr4 (265-308)||(21097887-21097930)
chr4 (208-265)||(24687142-24687196)
chr4 (265-300)||(27764911-27764946)
chr4 (102-145)||(34986896-34986939)
chr4 (120-167)||(38245872-38245919)
chr4 (263-309)||(10374194-10374240)
chr4 (265-311)||(18923896-18923942)
chr4 (267-309)||(18924031-18924073)
chr4 (267-309)||(38010660-38010702)
chr4 (268-309)||(17109772-17109813)
chr4 (265-309)||(1492811-1492855)
chr4 (265-309)||(2124394-2124438)
chr4 (265-309)||(8165812-8165856)
chr4 (265-309)||(8165928-8165972)
chr4 (267-311)||(9812997-9813041)
chr4 (77-145)||(20581924-20581992)
chr4 (265-309)||(25573707-25573751)
chr4 (265-309)||(27765033-27765077)
chr4 (265-309)||(31762979-31763023)
chr4 (265-309)||(33883344-33883388)
chr4 (265-305)||(36309571-36309611)
chr4 (265-309)||(54895533-54895577)
chr4 (265-300)||(6385802-6385837)
chr4 (50-89)||(10473660-10473699)
chr4 (120-167)||(45256849-45256896)
chr4 (265-295)||(1492720-1492750)
chr4 (265-295)||(8166044-8166074)
chr4 (265-295)||(12722904-12722934)
chr4 (265-295)||(16474986-16475016)
chr4 (265-295)||(21995718-21995748)
chr4 (53-103)||(26577257-26577307)
chr4 (265-299)||(29825937-29825971)
chr4 (265-295)||(29826070-29826100)
chr4 (265-295)||(31763074-31763104)
chr4 (265-295)||(38010541-38010571)
chr4 (265-295)||(38563927-38563957)
chr4 (265-295)||(50644350-50644380)
chr4 (265-295)||(54895452-54895482)
chr4 (276-309)||(4168997-4169030)
chr4 (272-309)||(8157167-8157204)
chr4 (122-167)||(26577306-26577351)
chr4 (52-89)||(45256907-45256944)
chr4 (276-309)||(51836581-51836614)
chr4 (265-309)||(1728854-1728898)
chr4 (265-309)||(4169173-4169217)
chr4 (265-309)||(6768547-6768591)
chr4 (265-309)||(27872870-27872914)
chr4 (265-309)||(53526402-53526446)
[»] chr3 (57 HSPs)
chr3 (93-265)||(47729019-47729190)
chr3 (66-265)||(23699939-23700137)
chr3 (66-265)||(23718394-23718592)
chr3 (66-265)||(23736850-23737048)
chr3 (51-265)||(16276663-16276886)
chr3 (52-265)||(8718963-8719186)
chr3 (52-265)||(9070850-9071073)
chr3 (136-265)||(41191475-41191604)
chr3 (136-265)||(34562465-34562594)
chr3 (66-264)||(23756124-23756332)
chr3 (93-265)||(51681224-51681407)
chr3 (208-265)||(28299400-28299454)
chr3 (218-265)||(51846155-51846202)
chr3 (265-309)||(36185776-36185820)
chr3 (265-309)||(53595424-53595468)
chr3 (227-265)||(9642988-9643026)
chr3 (267-309)||(21175218-21175260)
chr3 (265-311)||(39194577-39194623)
chr3 (268-309)||(38345430-38345471)
chr3 (265-309)||(8718881-8718925)
chr3 (265-309)||(9070768-9070812)
chr3 (265-309)||(9183790-9183834)
chr3 (265-309)||(16276925-16276969)
chr3 (265-309)||(23699857-23699901)
chr3 (265-309)||(23718312-23718356)
chr3 (265-309)||(23736768-23736812)
chr3 (269-309)||(23756041-23756081)
chr3 (265-309)||(34562632-34562676)
chr3 (265-309)||(47728937-47728981)
chr3 (265-309)||(51681445-51681489)
chr3 (120-167)||(19384424-19384471)
chr3 (120-167)||(50755146-50755193)
chr3 (267-309)||(51846242-51846284)
chr3 (208-253)||(17621383-17621428)
chr3 (208-253)||(17628566-17628611)
chr3 (145-198)||(51846095-51846148)
chr3 (265-309)||(47924215-47924259)
chr3 (265-309)||(49053275-49053319)
chr3 (265-300)||(47225807-47225842)
chr3 (271-309)||(9179581-9179619)
chr3 (265-295)||(19012526-19012556)
chr3 (265-295)||(23755922-23755952)
chr3 (265-295)||(28299535-28299565)
chr3 (265-295)||(34562767-34562797)
chr3 (267-309)||(37319082-37319124)
chr3 (51-89)||(51361517-51361555)
chr3 (107-164)||(28299257-28299313)
chr3 (265-298)||(28299578-28299611)
chr3 (94-131)||(32233757-32233794)
chr3 (120-149)||(47335134-47335163)
chr3 (265-309)||(8036850-8036894)
chr3 (265-309)||(8718748-8718792)
chr3 (265-309)||(9070635-9070679)
chr3 (93-145)||(9639885-9639937)
chr3 (265-293)||(23755881-23755909)
chr3 (265-309)||(30794999-30795043)
chr3 (265-309)||(41191642-41191686)
[»] scaffold0009 (4 HSPs)
scaffold0009 (54-265)||(202909-203120)
scaffold0009 (267-309)||(203160-203202)
scaffold0009 (265-309)||(203292-203336)
scaffold0009 (276-311)||(203346-203381)
[»] chr8 (64 HSPs)
chr8 (52-265)||(15259850-15260066)
chr8 (93-265)||(24472991-24473173)
chr8 (52-265)||(39022826-39023048)
chr8 (136-265)||(23397292-23397421)
chr8 (136-265)||(35301695-35301824)
chr8 (136-265)||(34647237-34647366)
chr8 (93-265)||(45409516-45409686)
chr8 (136-265)||(40022454-40022583)
chr8 (102-228)||(35448421-35448546)
chr8 (136-265)||(9853105-9853234)
chr8 (155-265)||(7614668-7614778)
chr8 (193-265)||(35448350-35448422)
chr8 (208-265)||(1672421-1672478)
chr8 (69-159)||(1672712-1672803)
chr8 (265-309)||(17656768-17656812)
chr8 (265-309)||(23397210-23397254)
chr8 (265-309)||(39022611-39022655)
chr8 (268-309)||(7614586-7614627)
chr8 (265-309)||(2541049-2541093)
chr8 (265-309)||(10585910-10585954)
chr8 (265-309)||(15809790-15809834)
chr8 (265-309)||(18026916-18026960)
chr8 (265-309)||(18161439-18161483)
chr8 (265-309)||(40022621-40022665)
chr8 (265-309)||(45409456-45409500)
chr8 (268-309)||(1672339-1672380)
chr8 (120-165)||(2751191-2751236)
chr8 (265-309)||(13526247-13526291)
chr8 (265-309)||(13615782-13615826)
chr8 (265-309)||(18022592-18022636)
chr8 (268-308)||(23940678-23940718)
chr8 (265-309)||(28698108-28698152)
chr8 (265-309)||(34343401-34343445)
chr8 (265-309)||(35301862-35301906)
chr8 (265-309)||(39022744-39022788)
chr8 (265-308)||(2523538-2523581)
chr8 (120-167)||(4835561-4835608)
chr8 (120-167)||(4841006-4841053)
chr8 (265-295)||(185929-185959)
chr8 (265-295)||(10586027-10586057)
chr8 (265-295)||(17656666-17656696)
chr8 (265-295)||(34647537-34647567)
chr8 (265-295)||(40022754-40022784)
chr8 (266-295)||(2541156-2541185)
chr8 (276-309)||(2750738-2750771)
chr8 (52-89)||(4835513-4835550)
chr8 (276-309)||(7058821-7058854)
chr8 (265-310)||(9853022-9853067)
chr8 (268-309)||(12356075-12356116)
chr8 (265-306)||(15260237-15260278)
chr8 (272-309)||(23504550-23504587)
chr8 (265-293)||(1672180-1672208)
chr8 (265-309)||(1672881-1672925)
chr8 (265-309)||(1773140-1773184)
chr8 (265-309)||(8439049-8439093)
chr8 (273-309)||(17230328-17230364)
chr8 (265-309)||(17792742-17792786)
chr8 (265-309)||(24472931-24472975)
chr8 (265-309)||(27506756-27506800)
chr8 (267-295)||(27506874-27506902)
chr8 (265-309)||(34647404-34647448)
chr8 (265-309)||(35448560-35448604)
chr8 (265-293)||(40246618-40246646)
chr8 (265-309)||(42434343-42434387)
[»] scaffold0097 (3 HSPs)
scaffold0097 (93-265)||(14458-14629)
scaffold0097 (265-309)||(14243-14287)
scaffold0097 (265-309)||(14376-14420)
[»] chr2 (44 HSPs)
chr2 (93-265)||(20710619-20710790)
chr2 (126-265)||(41345142-41345282)
chr2 (207-265)||(36636080-36636138)
chr2 (212-265)||(4280975-4281028)
chr2 (66-161)||(25996028-25996124)
chr2 (66-161)||(36635764-36635859)
chr2 (216-261)||(43823538-43823583)
chr2 (265-309)||(20710404-20710448)
chr2 (66-161)||(43823813-43823910)
chr2 (66-159)||(4280682-4280775)
chr2 (265-309)||(3928198-3928242)
chr2 (265-309)||(4281066-4281110)
chr2 (265-309)||(12449104-12449148)
chr2 (265-309)||(20710537-20710581)
chr2 (265-309)||(30777345-30777389)
chr2 (265-309)||(41345320-41345364)
chr2 (265-309)||(42364643-42364687)
chr2 (120-167)||(18297211-18297258)
chr2 (121-167)||(2264608-2264654)
chr2 (268-309)||(3926146-3926187)
chr2 (264-309)||(22596353-22596398)
chr2 (265-309)||(13081340-13081384)
chr2 (265-309)||(16111654-16111698)
chr2 (93-145)||(24023989-24024041)
chr2 (265-309)||(31711649-31711693)
chr2 (265-309)||(31783932-31783976)
chr2 (265-309)||(36636176-36636220)
chr2 (265-309)||(43823450-43823494)
chr2 (265-309)||(44341911-44341955)
chr2 (265-308)||(20661446-20661489)
chr2 (120-167)||(25193945-25193992)
chr2 (105-148)||(28478205-28478248)
chr2 (265-295)||(1095334-1095364)
chr2 (265-295)||(30777492-30777522)
chr2 (265-295)||(31711558-31711588)
chr2 (265-295)||(42364540-42364570)
chr2 (272-309)||(36636359-36636396)
chr2 (272-309)||(44915348-44915385)
chr2 (265-309)||(23225980-23226024)
chr2 (265-305)||(24183447-24183487)
chr2 (273-309)||(28049135-28049171)
chr2 (267-295)||(28055994-28056022)
chr2 (265-309)||(34726654-34726698)
chr2 (265-309)||(37867305-37867349)
[»] scaffold0194 (3 HSPs)
scaffold0194 (52-265)||(28501-28724)
scaffold0194 (265-309)||(28286-28330)
scaffold0194 (265-309)||(28419-28463)
[»] chr6 (37 HSPs)
chr6 (93-265)||(25119216-25119398)
chr6 (126-265)||(7765253-7765393)
chr6 (93-250)||(10588709-10588875)
chr6 (93-265)||(27079532-27079714)
chr6 (66-161)||(18612302-18612397)
chr6 (66-167)||(29163652-29163752)
chr6 (208-265)||(18612013-18612070)
chr6 (208-265)||(29163378-29163435)
chr6 (208-253)||(18756294-18756339)
chr6 (265-309)||(16967581-16967625)
chr6 (265-309)||(18611931-18611975)
chr6 (265-309)||(25119156-25119200)
chr6 (265-309)||(30909357-30909401)
chr6 (268-309)||(27079755-27079796)
chr6 (265-309)||(7765171-7765215)
chr6 (93-145)||(32557127-32557179)
chr6 (265-311)||(22857538-22857584)
chr6 (265-309)||(11140306-11140350)
chr6 (265-309)||(15008095-15008139)
chr6 (265-309)||(21384839-21384883)
chr6 (265-309)||(22031760-22031804)
chr6 (265-295)||(4102600-4102630)
chr6 (265-295)||(7371064-7371094)
chr6 (267-309)||(14237830-14237872)
chr6 (265-295)||(21384955-21384985)
chr6 (265-295)||(22857643-22857673)
chr6 (265-295)||(30387166-30387196)
chr6 (265-295)||(30909238-30909268)
chr6 (120-149)||(1449644-1449673)
chr6 (268-309)||(4338241-4338282)
chr6 (276-309)||(19281344-19281377)
chr6 (265-309)||(4102466-4102510)
chr6 (265-309)||(10698627-10698670)
chr6 (265-293)||(18611771-18611799)
chr6 (265-309)||(20522719-20522763)
chr6 (120-160)||(24736614-24736654)
chr6 (265-293)||(29157777-29157805)
[»] scaffold0338 (2 HSPs)
scaffold0338 (120-168)||(6466-6514)
scaffold0338 (276-309)||(6141-6174)
[»] scaffold0291 (1 HSPs)
scaffold0291 (265-309)||(9560-9604)
[»] scaffold0249 (1 HSPs)
scaffold0249 (265-309)||(23594-23638)
[»] scaffold0129 (1 HSPs)
scaffold0129 (265-309)||(19970-20014)
[»] scaffold0516 (1 HSPs)
scaffold0516 (265-309)||(1198-1242)
[»] scaffold0460 (1 HSPs)
scaffold0460 (105-145)||(2288-2328)
[»] scaffold0102 (2 HSPs)
scaffold0102 (265-309)||(15626-15670)
scaffold0102 (265-309)||(33767-33811)
[»] scaffold0074 (1 HSPs)
scaffold0074 (77-145)||(35783-35851)
[»] scaffold0031 (1 HSPs)
scaffold0031 (265-309)||(80717-80761)
[»] scaffold0664 (1 HSPs)
scaffold0664 (265-300)||(3113-3148)
[»] scaffold0019 (1 HSPs)
scaffold0019 (272-309)||(72652-72689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (93-145)||(119870-119922)
[»] scaffold0004 (1 HSPs)
scaffold0004 (265-309)||(96149-96193)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 53 - 265
Target Start/End: Original strand, 23319011 - 23319223
Alignment:
Q  53 ggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacga 152  Q
    |||||||| |||||| ||||||||||||| ||||||    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23319011 ggagcggttatggtggataaggaaatccttatgcactgtgcataaatctcagcccattaaccggtagcccaacataattgcttcctacacccccaaacga 23319110  T
Q  153 aaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctta 252  Q
    ||| |||||||||||||||||||     ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  23319111 aacaaaacgaaacaacactacaatcgcggaaatcatcattttagttcaatgattatttcaaagtgttgatttggttcaatgacagtcacaaatgtcctta 23319210  T
Q  253 ttatagtatgttt 265  Q
    |||||||||||||    
T  23319211 ttatagtatgttt 23319223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 18057858 - 18057645
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||||| ||||||||||||| |||||||   |||||||  ||||| ||||||| |||  |||||||| ||| ||||||||||||||| ||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatcccagcctattaaccagtaatccaacatatttgcttcctacacccccaagcg 18057759  T
Q  152 aaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctt 251  Q
    |||||||| ||||||||||||||||    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  18057758 aaaccaaatgaaacaacactacaaccgcggaaatcatcattttagtttaatgatgatttcagagtgttgatttggtttaatgacagtgacaaatgtcctt 18057659  T
Q  252 attatagtatgttt 265  Q
    ||||||||||||||    
T  18057658 attatagtatgttt 18057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 21255906 - 21256035
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| ||||||||||||||||||||||||||   | |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  21255906 cctacacctccaagcgaaaccaaacgaaacaacactacaatcgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgac 21256005  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  21256006 agtcacaaatgtccttattatagtatgttt 21256035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 30803258 - 30803039
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaa-ccggtagcccaacataattgtttcctacacccccaaac 150  Q
    ||||||||| |||||||||||||||      |||||||  ||||||||   |||||||||| ||||||| |||||||| ||| ||||||||||||||| |    
T  30803258 gggagcggttatggtgcataaggaat-----atgcaccgtacataaatccaagcccattaaaccggtagtccaacatatttgcttcctacacccccaagc 30803164  T
Q  151 gaaaccaaacgaa----------acaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtca 240  Q
    ||| |||||||||          ||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30803163 gaacccaaacgaaacaaaatgaaacaacactacaactgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtca 30803064  T
Q  241 caaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||    
T  30803063 caaatgtccttattatagtatgttt 30803039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 31084380 - 31084251
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| |||||||||||||||||||||||||||  | |||||||||||||||||||||| || |||||||||||||||||||||||||| ||    
T  31084380 cctacacctccaagcgaaaccaaacgaaacaacactacaaccgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaataac 31084281  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  31084280 agtcacaaatgtccttattatagtatgttt 31084251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 37643130 - 37642966
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcct-acacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttca 200  Q
    |||| ||||||| | |||||||||||||||| ||||| || | ||||| ||||||||||||||||||||||| |||    |||||||||||||||||| |    
T  37643130 cagctcattaactgatagcccaacataattgcttccttaccctcccaagcgaaaccaaacgaaacaacactaaaaccgcggaaatcatcattttagttta 37643031  T
Q  201 atgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37643030 atgatgatttcagagtgttggtttggttcaatgacagtcacaaatgtccttattatagtatgttt 37642966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 238
Target Start/End: Complemental strand, 45890642 - 45890459
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||||| ||||| ||||||| |||||||   |||||||| ||||||||||||||||||||||||||||||| || |||||| ||||| ||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaattccagcccattaaccggtagcccaacataattgctttctacactcccaagcg 45890543  T
Q  152 aaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagt 238  Q
    |||||||||||||||||||||||||    |||   ||||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  45890542 aaaccaaacgaaacaacactacaaccgcggaa---atcattttagttcaatgatgatttaaaagtgttgatttggttcaatgacagt 45890459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 10498231 - 10498102
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||| | |||| |||||||||||||||||||||||||| | | |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  10498231 cctacatctccaagcgaaaccaaacgaaacaacactacaattgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgac 10498132  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||| ||||||||||||||||    
T  10498131 agtcacaaatgtcattattatagtatgttt 10498102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 23277023 - 23277163
Alignment:
Q  126 ataattgtttcc-tacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgattt 224  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||| || ||||||| || |||||||    
T  23277023 ataattgtttccctacacctccaagggaaaccaaacgaaacaacactacaactgtgaaaatcatcattttagttcaataatgatttcagggtattgattt 23277122  T
Q  225 ggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23277123 ggttcaatgacagtcacaaatgtccttattatagtatgttt 23277163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 20506376 - 20506509
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||| ||| |||| |||||||||||||||||||||||||||  |  ||||||||||||||||||||| || |||||||||| ||||||||||||| ||||    
T  20506376 cctatacctccaagcgaaaccaaacgaaacaacactacaaccgtgaaaatcatcattttagttcaataatgatttcagagtattgatttggttcagtgac 20506475  T
Q  236 agtcacaaatgtccttattatagtatgtttggttt 270  Q
    |||||||||||| ||||||||||||||||| ||||    
T  20506476 agtcacaaatgt-cttattatagtatgttttgttt 20506509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 35197351 - 35197408
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  35197351 tttcagagtgttaatttggttcaatgacagtcacaaatgtctttattatagtatgttt 35197408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 37642928 - 37642882
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37642928 tggtttctgtgagttgtactccaaaaccattagatgtacttaatgat 37642882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 16116768 - 16116723
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16116768 tttcagagtgttgatttggttcaatgacaatcacaaatgtccttat 16116723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16117044 - 16116987
Alignment:
Q  104 gcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||    
T  16117044 gcccattaaccggtagtccaacataattgcttcctacacccccaaaggaaatcaaacg 16116987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 35197062 - 35197119
Alignment:
Q  104 gcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| |||| ||||||    
T  35197062 gcccattaaccggtagcccaatataattgtttcctacatccccaaatgaaatcaaacg 35197119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 2741543 - 2741499
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  2741543 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 2741499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 14390038 - 14389994
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  14390038 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 14389994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 17893122 - 17893166
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  17893122 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 17893166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18057474 - 18057430
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  18057474 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 18057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 23319261 - 23319305
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23319261 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 23319305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 45849158 - 45849202
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  45849158 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 45849202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 15588665 - 15588619
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15588665 tggtttctgtgacttgtactccaaaaccattagatgtacttaatgat 15588619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 24368610 - 24368568
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaa 307  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  24368610 tggtttctgtgagttgtactccaaaaccattagatgtacttaa 24368568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 31529021 - 31529067
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  31529021 tggtttatgtgagttgtactccaaaaccattagatgtacttaatgat 31529067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 12796623 - 12796579
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  12796623 tggtttctgtgagttgtactctaaaaccattagatgtacttaatg 12796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 17811277 - 17811233
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  17811277 tggtttctatgagttgtactccaaaaccattagatgtacttaatg 17811233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18057607 - 18057563
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  18057607 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 18057563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 19216588 - 19216548
Alignment:
Q  269 ttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  19216588 ttctgtgagttgtactccaaaatcattagatgcacttaatg 19216548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 20506542 - 20506586
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  20506542 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 20506586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 21256073 - 21256117
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  21256073 tggtttctgtgagttgtactccaaaacccttagatgtacttaatg 21256117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 28322633 - 28322677
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  28322633 tggtttctgtgagttgtactccaaaaccattagatatacttaatg 28322677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 33157174 - 33157130
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  33157174 tggtttctgtgagttgtactctaaaaccattagatgtacttaatg 33157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 35197446 - 35197490
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  35197446 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 35197490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 51420892 - 51420848
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  51420892 tggtttctgtgagttgcactccaaaaccattagatgtacttaatg 51420848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 4097152 - 4097199
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  4097152 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 4097199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 8401445 - 8401492
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  8401445 cccaacataattgtttcctacacctccaaaggaaaccaaacaaaacaa 8401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 16116679 - 16116636
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  16116679 tggtttctgtgagttgtactccaaaatcattagatgtacttaat 16116636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 30788814 - 30788779
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    ||||||||||||||||||||||||||||||||||||    
T  30788814 tggtttctgtgagttgtactccaaaaccattagatg 30788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 51801081 - 51801120
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  51801081 tgtgagttgtactccaaaaccattagatgtacttaatgat 51801120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 23921171 - 23921205
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  23921171 tggtttctgtgagttgtactccaaaaccattagat 23921205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 11422570 - 11422526
Alignment:
Q  121 ccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||    
T  11422570 ccaacataattgcttcctacacccccaaaggaaaccaaacaaaac 11422526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 12070478 - 12070514
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12070478 tgtgagttgtactccaaaaccattagatgtacttaat 12070514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 20481527 - 20481487
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  20481527 cccattaaccggtagcccaacataattgcttcgtacacccc 20481487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 23174445 - 23174485
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaac 160  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  23174445 cccaacataattgcttcctacacccccaaaggaaaccaaac 23174485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 23277195 - 23277239
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||    
T  23277195 tggtttctgtgagttgtactccaaaaccatcaaatgtacttaatg 23277239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 31084213 - 31084169
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  31084213 tggtttatgtgagttgtactccaaaatcattagatgtacttaatg 31084169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 45890415 - 45890371
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  45890415 tggtttatgtgagttgtactccaaaatcattagatgtacttaatg 45890371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 16116503 - 16116472
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatta 296  Q
    ||||||||||||||||||||||||||||||||    
T  16116503 tggtttctgtgagttgtactccaaaaccatta 16116472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 21641637 - 21641684
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||||    
T  21641637 cccaacataattgcttcctacaccaccaaaggaaaccaaacaaaacaa 21641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 33097846 - 33097811
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    |||||||||||||||| |||||||||||||||||||    
T  33097846 tggtttctgtgagttggactccaaaaccattagatg 33097811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 44261113 - 44261070
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    |||||||||||| | ||||||||||||||||||||| |||||||    
T  44261113 tggtttctgtgactcgtactccaaaaccattagatgtacttaat 44261070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 10497931 - 10497901
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  10497931 tggtttctgtgagttgtactccaaaaccatt 10497901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 11354477 - 11354507
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  11354477 tggtttctgtgagttgtactccaaaaccatt 11354507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 11422622 - 11422584
Alignment:
Q  49 gttgggagcggtcatggtgcataaggaaatcctaatgca 87  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  11422622 gttgggagcggttatggtgcataaggaaatccttatgca 11422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 12070576 - 12070606
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  12070576 tggtttctgtgagttgtactccaaaaccatt 12070606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 14229327 - 14229357
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  14229327 tggtttctgtgagttgtactccaaaaccatt 14229357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 18952552 - 18952582
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  18952552 tggtttctgtgagttgtactccaaaaccatt 18952582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 21256205 - 21256235
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  21256205 tggtttctgtgagttgtactccaaaaccatt 21256235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 23277332 - 23277362
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  23277332 tggtttctgtgagttgtactccaaaaccatt 23277362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 23921014 - 23921044
Alignment:
Q  120 cccaacataattgtttcctacacccccaaac 150  Q
    |||||||||||||||||||||||||||||||    
T  23921014 cccaacataattgtttcctacacccccaaac 23921044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 23921303 - 23921333
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  23921303 tggtttctgtgagttgtactccaaaaccatt 23921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 29945295 - 29945265
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  29945295 tggtttctgtgagttgtactccaaaaccatt 29945265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 31084079 - 31084049
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  31084079 tggtttctgtgagttgtactccaaaaccatt 31084049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 32595182 - 32595152
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  32595182 tggtttctgtgagttgtactccaaaaccatt 32595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 37642796 - 37642766
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  37642796 tggtttctgtgagttgtactccaaaaccatt 37642766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 42133996 - 42134038
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  42133996 gtttctgtgagttgtacttcaaaatcattagatgtacttaatg 42134038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 18928944 - 18928907
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  18928944 tgtgagttatactccaaaaccattagatgtacttaatg 18928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 43452673 - 43452644
Alignment:
Q  120 cccaacataattgtttcctacacccccaaa 149  Q
    ||||||||||||||||||||||||||||||    
T  43452673 cccaacataattgtttcctacacccccaaa 43452644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 45890271 - 45890238
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  45890271 agttgtactccaaaaccattagatgtacttaatg 45890238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 51904750 - 51904787
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| || ||||||||    
T  51904750 tgtgagttgtactccaaaaccattagttgtacttaatg 51904787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 6708511 - 6708467
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||    
T  6708511 tggtttatgtgagttgtactccaaaataattagatgtacttaatg 6708467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 12796505 - 12796477
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||    
T  12796505 gtttctgtgagttgtactccaaaaccatt 12796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 18928856 - 18928828
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  18928856 tggtttctgtgagttgtactccaaaacca 18928828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 18952457 - 18952501
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||| ||  ||||||||    
T  18952457 tggtttatgtgagttgtactccaaaaccattaaatatacttaatg 18952501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 19850677 - 19850641
Alignment:
Q  273 gtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||| | ||||||    
T  19850677 gtgagttgtactccaaaaccattagatgtatttaatg 19850641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 30803001 - 30802961
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcactt 305  Q
    |||||| |||||||||||||||| |||||||||||| ||||    
T  30803001 tggtttatgtgagttgtactccataaccattagatgtactt 30802961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 35754762 - 35754718
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||| | ||| ||||||||    
T  35754762 tggtttctgtgagttgtactccaaaatcatcatatgtacttaatg 35754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 44687890 - 44687934
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||||    
T  44687890 tggtttatgtgagttgtacttcaaaatcattagatgtacttaatg 44687934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 46590608 - 46590652
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||| |||| ||||||||| ||||||||    
T  46590608 tggtttttgtgagttgtactctaaaatcattagatgtacttaatg 46590652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 47693716 - 47693760
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||| || |||||||||||||| ||||||||    
T  47693716 tggtttttgtgagttgtattctaaaaccattagatgtacttaatg 47693760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 6e-74; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 53 - 265
Target Start/End: Complemental strand, 13363842 - 13363630
Alignment:
Q  53 ggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacga 152  Q
    |||||||| |||||||| ||||||||||| |||||||   |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaatcccagtccattaaccggtagcccaacataattgtttcctacacccccaagcga 13363743  T
Q  153 aaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctta 252  Q
    ||| ||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  13363742 aacaaaacgaaacaacactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttgaatgacagtcataaatgtcctta 13363643  T
Q  253 ttatagtatgttt 265  Q
    |||||||||||||    
T  13363642 ttatagtatgttt 13363630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 62 - 265
Target Start/End: Original strand, 23334716 - 23334918
Alignment:
Q  62 atggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    |||||||||||||||||| || ||||||   |||||||  |||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  23334716 atggtgcataaggaaatctta-tgcaccgtgcataaatcccagcccattaaccggtagtccaacataatttcttcctacacccccaagcgaaaccaaacg 23334814  T
Q  162 aaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtat 261  Q
    ||||||||| |||||    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23334815 aaacaacaccacaaccgcggatatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtat 23334914  T
Q  262 gttt 265  Q
    ||||    
T  23334915 gttt 23334918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 95 - 265
Target Start/End: Original strand, 18464391 - 18464568
Alignment:
Q  95 taaatttcagcccattaaccggtagcccaacataattgtttcct-acacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattt 193  Q
    |||||| ||||| ||||||||||| ||||||||||||| ||||| |||||  ||| |||||| ||||||||||||||||||||  | |||||||||||||    
T  18464391 taaattccagcctattaaccggtaacccaacataattgcttccttacaccttcaagcgaaacaaaacgaaacaacactacaaccgtggaaatcatcattt 18464490  T
Q  194 tagttcaatgataatttcagagtgttgatttggttcaatgac------agtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||| |||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  18464491 tagttcaatgatgatttcagagtgttgatttggttcaatgaccattttagtcacaaatgtccttattatagtatgttt 18464568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 16667667 - 16667762
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    |||||||||||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  16667667 tgcataaggaaatccttatgcaccgtgcataaatcccagcccattaaccggtagcccaacataattgcttcctacacccccaaaggaaaccaaacg 16667762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 16667978 - 16668035
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16667978 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtgtgttt 16668035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 23948630 - 23948517
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||| ||| |||||||||||| ||||||| |||||||   ||  |||  ||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  23948630 gggagtggttatggtgcataagaaaatccttatgcaccgtgca--aatcccagcccattaaccggtagcccaacataattgtttcttacaccccgaagcg 23948533  T
Q  152 aaaccaaacgaaacaa 167  Q
    |||| |||||||||||    
T  23948532 aaacaaaacgaaacaa 23948517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 16552297 - 16552341
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16552297 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 16552341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 22830782 - 22830738
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  22830782 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 22830738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 23334956 - 23335000
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23334956 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 23335000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 35662227 - 35662183
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  35662227 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 35662183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 37857545 - 37857493
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  37857545 cataaatcccagcccattaaccggtagcccaacataattgtttcatacacccc 37857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 42512674 - 42512630
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  42512674 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 42512630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 5630263 - 5630221
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  5630263 gtttctgtgagttgtactccaaaaccattagatgtacttaatg 5630221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 3340773 - 3340729
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  3340773 tggtttctgtgagttatactccaaaaccattagatgtacttaatg 3340729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 7286948 - 7286904
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  7286948 tggtttctgtgagttgtacttcaaaaccattagatgtacttaatg 7286904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 11660843 - 11660887
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  11660843 tggtttttgtgagttgtactccaaaaccattagatgtacttaatg 11660887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 35915913 - 35915869
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  35915913 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 35915869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 15059627 - 15059586
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcactta 306  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  15059627 tggtttctgtgagttgtattccaaaaccattagatgtactta 15059586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 33868774 - 33868737
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  33868774 tgtgagttgtactccaaaaccattagatgtacttaatg 33868737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 703780 - 703824
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  703780 tggtttttgtgagttgtactccaaaatcattagatgtacttaatg 703824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 4675524 - 4675480
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  4675524 tggtttatgtgagttgtactccaaaaccattagatatacttaatg 4675480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 8949671 - 8949631
Alignment:
Q  269 ttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  8949671 ttctgtgagttgtactccaaaaccattagatgtatttaatg 8949631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 11376431 - 11376475
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  11376431 tggtttctgtgagttgtacttcaaaatcattagatgtacttaatg 11376475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 13363592 - 13363548
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||    
T  13363592 tggtttctgtgaattgtactccaaaatcattagatgtacttaatg 13363548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 16552429 - 16552473
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  16552429 tggtttatgtgagttgtactccaaaactattagatgtacttaatg 16552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 20134249 - 20134293
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||    
T  20134249 tggtttctgtgagttgtattccaaaatcattagatgtacttaatg 20134293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23155720 - 23155676
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||| |||| || |||||    
T  23155720 tggtttctgtgagttgtactccaaaaccatttgatgtacgtaatg 23155676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 23335087 - 23335131
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  23335087 tggtttatgtgagttgtactctaaaaccattagatgtacttaatg 23335131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 25016483 - 25016527
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  25016483 tggtttctgtgagttatactccaaaatcattagatgtacttaatg 25016527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 25016616 - 25016660
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  25016616 tggtttctgtgagttctactccaaaatcattagatgtacttaatg 25016660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 33857404 - 33857448
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  33857404 tggtttatgtgagttgtactccaaaaccattagatttacttaatg 33857448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 39086700 - 39086656
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||    
T  39086700 tggtttctgtgagctgtactccaaaaccattatatgtacttaatg 39086656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 7183921 - 7183870
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacaccc 144  Q
    ||||||| ||||||||||||| ||||||| |||||||||| ||| |||||||    
T  7183921 cataaatctcagcccattaacaggtagcctaacataattgcttcgtacaccc 7183870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 39055809 - 39055848
Alignment:
Q  104 gcccattaaccggtagcccaacataattgtttcctacacc 143  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  39055809 gcccattaaccggtagcccaacataattgcttcgtacacc 39055848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 8949542 - 8949512
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  8949542 tggtttctgtgagttgtactccaaaaccatt 8949512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 16668206 - 16668236
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  16668206 tggtttctgtgagttgtactccaaaaccatt 16668236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 22695532 - 22695490
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||||| || |||||    
T  22695532 gtttctgtgagttgtattccaaaaccattagatgtacctaatg 22695490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 23155603 - 23155573
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  23155603 tggtttctgtgagttgtactccaaaaccatt 23155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 13553166 - 13553125
Alignment:
Q  48 ggttgggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  13553166 ggttgggagtggttatggtgcataaggaaatccttatgcacc 13553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 16668076 - 16668117
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||  |||||||    
T  16668076 tttctgtgagttgtactctaaaaccattagatgtccttaatg 16668117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 34329829 - 34329796
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  34329829 agttgtactccaaaaccattagatgtacttaatg 34329796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 39166204 - 39166245
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||| |||||||||||||||||||||| | ||||||    
T  39166204 tttctgtgagctgtactccaaaaccattagatgtaattaatg 39166245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 4951211 - 4951175
Alignment:
Q  273 gtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  4951211 gtgagttgtactccaaaatcattagatgtacttaatg 4951175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 11660792 - 11660836
Alignment:
Q  56 gcggtcatggtgcataaggaaatcctaatgcacctcacataaatt 100  Q
    ||||| |||||||||||||||||||| |||||||  |||||||||    
T  11660792 gcggttatggtgcataaggaaatccttatgcaccctacataaatt 11660836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 13363460 - 13363416
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||| |||||| |||||||| ||||||||    
T  13363460 tggtttatgtgagttgtactacaaaacaattagatgtacttaatg 13363416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 15059509 - 15059481
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||    
T  15059509 gtttctgtgagttgtactccaaaaccatt 15059481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 20696178 - 20696222
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| |||||| |||||||| | ||||||    
T  20696178 tggtttctgtgagttgtacttcaaaacaattagatgtatttaatg 20696222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 23155835 - 23155791
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||| |||||||||||||||||||||| |||| || |||||||    
T  23155835 gtttctatgagttgtactccaaaaccattcgatgtacgtaatgat 23155791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 39861629 - 39861673
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||    
T  39861629 tggtttcggtgagttgtatttcaaaaccattagatgtacttaatg 39861673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 33798782 - 33798570
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||| ||| |||||||||||||||||||| |||||||  || |||||   ||||||||||||| |||||||||||||||| |||||||||| | || ||    
T  33798782 gggagtggttatggtgcataaggaaatccttatgcaccgtacgtaaatccaagcccattaaccgatagcccaacataattgcttcctacacctc-aagcg 33798684  T
Q  152 aaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctt 251  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33798683 aaaccaaacgaaacaacactacaaccgtggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcacaaatgtcctt 33798584  T
Q  252 attatagtatgttt 265  Q
    ||||||||||||||    
T  33798583 attatagtatgttt 33798570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 5758345 - 5758146
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcc-tacacccccaaacgaaaccaaacgaaa 164  Q
    |||||||||||||||| ||||| |    ||||||  |||||||||||||| |||||||||||||||| |||| |||||||| || |||||||||||||||    
T  5758345 tgcataaggaaatccttatgcatcgtggataaatcccagcccattaaccg-tagcccaacataattgcttccctacaccccgaagcgaaaccaaacgaaa 5758247  T
Q  165 caacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgtt 264  Q
    ||||||||||||    |||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5758246 caacactacaaccgcggaaatcatcaatttagttcaatgatgatttcagagtgttgatttggttcaatgaaagtcacaaatgtccttattatagtatgtt 5758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 30430845 - 30430610
Alignment:
Q  19 cacagattcacagtattgcaacgtaatttggttgggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggta 118  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||           ||   |||||||||||   ||||||  ||||    
T  30430845 cacatattcacagtattgcaacgtaatttggttggtagcggttatggtgcataaggaa-----------ccgtgcataaatttcaattcattaattggta 30430757  T
Q  119 gcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgt 218  Q
    |||||||||||||| ||||||||  ||||| ||||| |||| |||||||||||||||   | ||||||||||||||||||||| ||| ||||||||||||    
T  30430756 gcccaacataattgcttcctacatgcccaagcgaaatcaaatgaaacaacactacaatcgtggaaatcatcattttagttcaaagatgatttcagagtgt 30430657  T
Q  219 tgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30430656 tgatttggttcaatgacaatcacaaatgtccttattatagtatgttt 30430610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 265
Target Start/End: Complemental strand, 46025108 - 46024886
Alignment:
Q  53 ggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacga 152  Q
    |||| ||| |||||||||||||||||||  |||||||   |||||||   | | |||||||||||||||||||||||||| ||||||||||||||| |||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaatcctaactcattaaccggtagcccaacataattgcttcctacacccccaagcga 46025009  T
Q  153 aaccaaacgaaacaa----------cactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcaca 242  Q
    |||||||||||||||          |||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46025008 aaccaaacgaaacaaaccgaaacaacactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcaca 46024909  T
Q  243 aatgtccttattatagtatgttt 265  Q
    ||||||| |||||||||||||||    
T  46024908 aatgtccatattatagtatgttt 46024886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 48830577 - 48830448
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  48830577 cctacacctccaagcgaaaccaaacgaaacaacactacaactgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgac 48830478  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||| ||||    
T  48830477 agtcacaaatgtccttattatagtacgttt 48830448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 32091590 - 32091380
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattg-tttcctacacccc----------caaacgaaa 154  Q
    ||||||||||||| || |||||||   ||||||| || ||| ||||| |||||| | |||||||||| |||| ||||||||          |||||||||    
T  32091590 tgcataaggaaattctcatgcaccgtgcataaatctccgccaattaatcggtagtctaacataattgttttcttacacccccaagcgaaatcaaacgaaa 32091491  T
Q  155 ccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttatt 254  Q
    |  |||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32091490 cataacgaaacaacactacaaccgtggaaatcatcattttagttcaatgatgatttcagagtgttgatttagttcaatgacagtcacaaatgttcttatt 32091391  T
Q  255 atagtatgttt 265  Q
    |||||| ||||    
T  32091390 atagtacgttt 32091380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 156 - 265
Target Start/End: Complemental strand, 24360723 - 24360614
Alignment:
Q  156 caaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttatta 255  Q
    |||||||||||||||||||||  |  ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24360723 caaacgaaacaacactacaaccgtgaaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaataacagtcacaaatgtccttatta 24360624  T
Q  256 tagtatgttt 265  Q
     || ||||||    
T  24360623 cagcatgttt 24360614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 27334857 - 27334912
Alignment:
Q  210 tcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27334857 tcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 27334912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 27334716 - 27334784
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacac 170  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  27334716 cagcccattaatcggtagcccaacataattgcttcgtacacccccaagcgaaaccaaacgaaacaacac 27334784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 16932599 - 16932537
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||    
T  16932599 cccattaaccggtagcccaacataattgcttcctacaccactaaaggaaaccaaacgaaacaa 16932537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 16937982 - 16937920
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||    
T  16937982 cccattaaccggtagcccaacataattgcttcctacaccactaaaggaaaccaaacgaaacaa 16937920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 44140390 - 44140444
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatg 262  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  44140390 tttcagagtgttgatttggtttaataacagtcacaaatgtccttattatagtatg 44140444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 12286060 - 12286015
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12286060 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 12286015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 46345895 - 46345951
Alignment:
Q  108 attaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaa 164  Q
    ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  46345895 attaaccggtagcccaacataattgcttcctacaccctcaaaggaaaccaaacgaaa 46345951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 44140103 - 44140156
Alignment:
Q  106 ccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaa 159  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  44140103 ccattaaccggtagcccaacataattgcttccttcacccccaaaggaaaccaaa 44140156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 6620792 - 6620748
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  6620792 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 6620748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 24360576 - 24360532
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  24360576 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 24360532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 30430572 - 30430528
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  30430572 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 30430528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 32604771 - 32604815
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  32604771 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 32604815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 39006871 - 39006939
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacac 170  Q
    |||| ||||||||| ||||| |||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  39006871 cagctcattaaccgatagcctaacataattgctttgtacacccccaagcgaaaccaaacgaaacaacac 39006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 44426793 - 44426749
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  44426793 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 44426749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 32091340 - 32091298
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  32091340 gtttctgtgagttgtactccaaaaccattagatgtacttaatg 32091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 48830408 - 48830366
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  48830408 gtttctgtgagttgtactccaaaaccattagatgtacttaatg 48830366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 6846629 - 6846673
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  6846629 tggtttctgtgagttgtactccaaaaccattagatttacttaatg 6846673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 30430439 - 30430395
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  30430439 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 30430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 31365464 - 31365420
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  31365464 tggtttctgtgagttgtactccaaaaccattagatgtatttaatg 31365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 38837590 - 38837634
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  38837590 tggtttctgtgagttgtactccaaaaccattagatgtacctaatg 38837634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 39007243 - 39007287
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  39007243 tggtttctgtgagttgtactccaaaaccattagatatacttaatg 39007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 41065818 - 41065862
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  41065818 tggtttctgtgagttgtactccaaaaccattaaatgtacttaatg 41065862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 46004391 - 46004435
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  46004391 tggtttctgtgagttgtactccaaaaccattagctgtacttaatg 46004435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 39007108 - 39007162
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||| |||||||||||||||||||   |||||||||| |||||||||||||||||||    
T  39007108 tttcaaagtgttgatttggttcaat---agtcacaaatatccttattatagtatgttt 39007162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 46346039 - 46346089
Alignment:
Q  212 agagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  46346039 agagtgttgatctggttcaat---agtcacaaatgtccttattatagtatgttt 46346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 46024841 - 46024804
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  46024841 tgtgagttgtactccaaaaccattagatgtacttaatg 46024804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 298
Target Start/End: Original strand, 46346170 - 46346203
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattaga 298  Q
    ||||||||||||||||||||||||||||||||||    
T  46346170 tggtttctgtgagttgtactccaaaaccattaga 46346203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 5728874 - 5728830
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||    
T  5728874 tggtttctgtgagttgtattccaaaaccattagatgtatttaatg 5728830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 6796732 - 6796784
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||||| |||||||||||||||||  ||||||||||||| ||| ||||||||    
T  6796732 cataaatctcagcccattaaccggtgacccaacataattgattcgtacacccc 6796784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 7843569 - 7843613
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  7843569 tggtttatgtgagttgtactccaaaaccattaaatgtacttaatg 7843613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 25779527 - 25779483
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  25779527 tggtttctatgagttgtactccaaaaccattagatttacttaatg 25779483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 27334993 - 27335037
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||    
T  27334993 tggtttctgtgaattgtactctaaaaccattagatgtacttaatg 27335037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 34876215 - 34876171
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  34876215 tggtttatgtgagttgtactccaaaactattagatgtacttaatg 34876171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 45402228 - 45402268
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  45402228 cccattaaccggtagcccaacataattgcttcgtacacccc 45402268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 46024715 - 46024671
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  46024715 tggtttatgtgagttgtacttcaaaaccattagatgtacttaatg 46024671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 46572617 - 46572656
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaa 159  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  46572617 cccaacataattgcttcctacacccccaaaggaaaccaaa 46572656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 48692051 - 48692004
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||||    
T  48692051 cccaacataattgcttcctacacctccaaaggaaaccaaacaaaacaa 48692004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 5728758 - 5728728
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  5728758 tggtttctgtgagttgtactccaaaaccatt 5728728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 24360443 - 24360413
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  24360443 tggtttctgtgagttgtactccaaaaccatt 24360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 25779394 - 25779364
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  25779394 tggtttctgtgagttgtactccaaaaccatt 25779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 32090062 - 32090092
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  32090062 tggtttctgtgagttgtactccaaaaccatt 32090092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 34876258 - 34876228
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  34876258 tggtttctgtgagttgtactccaaaaccatt 34876228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 48830277 - 48830247
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  48830277 tggtttctgtgagttgtactccaaaaccatt 48830247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 11732037 - 11732074
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  11732037 gggagcggttatggtgcataaggaaatccttatgcacc 11732074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 33798525 - 33798488
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  33798525 tgtgagttgtattccaaaaccattagatgtacttaatg 33798488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 44140526 - 44140559
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatg 300  Q
    |||| |||||||||||||||||||||||||||||    
T  44140526 gtttttgtgagttgtactccaaaaccattagatg 44140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 46572569 - 46572606
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  46572569 gggagcggttatggtgcataaggaaatccttatgcacc 46572606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 5758108 - 5758064
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||| | ||||||||||| |||||||||||||| ||||||||    
T  5758108 tggtttcagggagttgtactcgaaaaccattagatgtacttaatg 5758064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 15973856 - 15973892
Alignment:
Q  53 ggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    |||||||| |||||||||||||||||||| |||||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcacc 15973892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 21405386 - 21405434
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctaca 141  Q
    |||||||  ||| ||||||||||||||||||||||||||| ||| ||||    
T  21405386 cataaatcacagtccattaaccggtagcccaacataattgcttcgtaca 21405434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 21098181 - 21097968
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||||| ||||||||||||| |||||||   |||||||  |||||||||||| |||||||||||||||||| ||| ||||||||||| ||    
T  21098181 gggagcggttatggtgtataaggaaatccttatgcaccatgcataaatcacagcccattaactggtagcccaacataattgcttcatacacccccaagcg 21098082  T
Q  152 aaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctt 251  Q
    ||||||||| |||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21098081 aaaccaaacaaaacaacactacaaccgcgaaaatcatcattttagttcaataataatttcagagtgttgatttggttcaatgacagtcacaaatgtcctt 21097982  T
Q  252 attatagtatgttt 265  Q
    ||||||||||||||    
T  21097981 attatagtatgttt 21097968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 47 - 265
Target Start/End: Original strand, 22180196 - 22180424
Alignment:
Q  47 tggttgggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc- 145  Q
    |||||||||||||| |||||||||||||||||||| |||||||   |||||||  ||||||||||| |||||| |||||||||||||||||||||||||     
T  22180196 tggttgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccagcccattaatcggtaggccaacataattgtttcctacacccct 22180295  T
Q  146 ---------caaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgaca 236  Q
             ||||||||||  |||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  22180296 aagcgaaaccaaacgaaacagaacgaaacaacactacaaccgtggaaatcatcattttagttcaatgatgatttcagagtgttggtttggttcaatgaca 22180395  T
Q  237 gtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||    
T  22180396 gtcacaaatgtccttattatagtatgttt 22180424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 265
Target Start/End: Original strand, 50562679 - 50562879
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcc-tacacccccaaacgaaaccaaacgaaa 164  Q
    |||||||||||||||| ||||| |   |||||||  ||||||||||||||||||| ||||||||||| |||| |||||||||||  ||||||||||||||    
T  50562679 tgcataaggaaatccttatgcatcgtgcataaatcccagcccattaaccggtagctcaacataattgcttccctacacccccaagtgaaaccaaacgaaa 50562778  T
Q  165 caacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgtt 264  Q
    ||| ||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50562779 caaaactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgtt 50562878  T
Q  265 t 265  Q
    |    
T  50562879 t 50562879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 76 - 265
Target Start/End: Complemental strand, 18924312 - 18924113
Alignment:
Q  76 aatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaa----------acgaaaccaaacgaaac 165  Q
    |||||| |||||||   |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||          ||||||| |||||||||    
T  18924312 aatccttatgcaccgtgcataaattccagcccattaaccggtagtccaacataattgtttcctacacccccaagcgaaactaaacgaaacaaaacgaaac 18924213  T
Q  166 aacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||| ||||    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18924212 aacactgcaaccgcggaaattatcattttaattcaatgatgatttcagagtgttgatttggttcaatcacagtcacaaatgtccttattatagtatgttt 18924113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 56 - 265
Target Start/End: Complemental strand, 4169473 - 4169255
Alignment:
Q  56 gcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc---------- 145  Q
    ||||| ||||||||||||||||| || ||||||   ||||||||  ||||| ||||||||||||  ||| ||||||||||||||||||||              
T  4169473 gcggttatggtgcataaggaaattcttatgcactgtacataaatcacagcctattaaccggtagttcaatataattgtttcctacacccctaagcgaaac 4169374  T
Q  146 caaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaat 245  Q
    |||||||||| ||||||||||||||||||||     |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  4169373 caaacgaaacaaaacgaaacaacactacaaccgcgaaaattatcattttagttcaatgatgatttcagagtgtt-atttggttcaatgacagtcacaaat 4169275  T
Q  246 gtccttattatagtatgttt 265  Q
    ||||||||||||||||||||    
T  4169274 gtccttattatagtatgttt 4169255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 30779453 - 30779634
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa----------cactacaactataga 182  Q
    |||||||  ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||          |||||||||    ||    
T  30779453 cataaatcccagcccattaaccggtagcccaacataattgcttcc-acacccccaagcgaaaccaaacgaaacaaaacgaaacaacactacaaccgcgga 30779551  T
Q  183 aatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30779552 aatcatcattttagttcaatgatgattttagagttttgatctggttcaatgacagtcacaaatgtccttattatagtatgttt 30779634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 30358826 - 30358686
Alignment:
Q  126 ataattgtttcc-tacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgattt 224  Q
    ||||||| |||| |||||| |||| |||||||||||||||||||||||||||  |  ||||||||||||||||||||| || |||||| |||| ||||||    
T  30358826 ataattgcttccatacacctccaagcgaaaccaaacgaaacaacactacaaccgtgaaaatcatcattttagttcaataatgatttcatagtgatgattt 30358727  T
Q  225 ggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30358726 ggttcaatgacagtcacaaatgtccttattatagtaagttt 30358686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 111 - 265
Target Start/End: Complemental strand, 27765278 - 27765115
Alignment:
Q  111 aaccggtagcccaacataattgtttcctacacccc---------caaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaa 201  Q
    |||||||||||||||||||||| ||||||||||||         ||||| |||| ||||||||||||| || |||    ||||||||||||| |||||||    
T  27765278 aaccggtagcccaacataattgcttcctacaccccaagcgaaaccaaacaaaacaaaacgaaacaacattataaccgcggaaatcatcatttcagttcaa 27765179  T
Q  202 tgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27765178 tgatgatttcagagtgttgatttggttcaatgacactcacaaatgtccttattatagtatgttt 27765115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 1728705 - 1728816
Alignment:
Q  151 gaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcct 250  Q
    ||||||||||||||||||||||||||  |  |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||      
T  1728705 gaaaccaaacgaaacaacactacaaccgtgaaaatcatcatttaagttcaataatgatttcagagtgttgatttggttcaatgacagtcacaaatgtc-- 1728802  T
Q  251 tattatagtatgttt 265  Q
     ||||||||||||||    
T  1728803 -attatagtatgttt 1728816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 20862482 - 20862398
Alignment:
Q  181 gaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20862482 gaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgacagtcataaatgtccttattatagtatgttt 20862398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 9552119 - 9552176
Alignment:
Q  207 atttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgtt 264  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9552119 atttcagagtgtttatttggttcaatgacagtcacaaatgtccttattatagtatgtt 9552176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 9553144 - 9553201
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9553144 tttcagagtgttgatttggttcaatgacagtcgcaaatgtccttattatagtatgttt 9553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 48076921 - 48077014
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaa 159  Q
    |||||||||||||||| |||||||   |||||||  |||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||    
T  48076921 tgcataaggaaatccttatgcaccgtgcataaatcccagcccattaaccggtagtccaacataattgattcctacacgcccaaaggaaaccaaa 48077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 48077244 - 48077301
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48077244 tttcagattgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 48077301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 25573252 - 25573326
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||    
T  25573252 cataaatcccagcccattaaccggtagcccaacataattgcttcgtacacccccaagcgaaaccaaacaaaacaa 25573326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 6385664 - 6385721
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  6385664 tttcagagtattgatttggttcaatgacagtcacaaatgtccttattatattatgttt 6385721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 36621025 - 36621134
Alignment:
Q  103 agcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaat 202  Q
    |||||||||| |||||| |||||||||||||||| ||||||||||||||||||          |||||||||||    ||||||||||||||||||||||    
T  36621025 agcccattaatcggtagtccaacataattgtttc-tacacccccaaacgaaac----------aacactacaaccgcggaaatcatcattttagttcaat 36621113  T
Q  203 gataatttcagagtgttgatt 223  Q
    ||| |||||||||||||||||    
T  36621114 gatgatttcagagtgttgatt 36621134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 24687343 - 24687280
Alignment:
Q  101 tcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaa 164  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||    
T  24687343 tcagcccattaaccggtagcccatcataattgcttcctacacccctaaaggaaaccaaacgaaa 24687280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 25573529 - 25573583
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  25573529 tttcagagtgttgatttggttcaat---agtcacaaatgtccttattatagtatgttt 25573583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 49137277 - 49137323
Alignment:
Q  219 tgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  49137277 tgatttggttcaatgacagtcacaaatgtcctttttatagtatgttt 49137323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 6385392 - 6385449
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaa 159  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||    
T  6385392 cagcccattaaccggtagcccaacataattgcttcatacaccctcaaaggaaaccaaa 6385449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 43852176 - 43852221
Alignment:
Q  264 ttggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  43852176 ttggtttctgtgagttgtactccaaaaccattagatgtacttaatg 43852221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 22180584 - 22180628
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  22180584 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 22180628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 16474873 - 16474916
Alignment:
Q  266 ggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  16474873 ggtttctgtgagttgtactccaaaaccattagatgtacttaatg 16474916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 9553094 - 9553136
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaa 307  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  9553094 tggtttctgtgagttgtactccaaaaccattagatgtacttaa 9553136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 21097798 - 21097752
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  21097798 tggtttctgtgagttgtactccaaaaccattagatatacttaatgat 21097752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 9553011 - 9553060
Alignment:
Q  221 atttggttcaatgacagtcacaaatgtccttattatagtatgtttggttt 270  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9553011 atttggttcaatgacagtaacaaatatccttattatagtatgttttgttt 9553060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 4169084 - 4169040
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  4169084 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 4169040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 12722788 - 12722832
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  12722788 tggtttctgtgagttgtactccaaaaccattagatatacttaatg 12722832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 20581616 - 20581668
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||    
T  20581616 cataaatctcagcccattaaccggtagtccaacataattggttcgtacacccc 20581668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 22180451 - 22180495
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  22180451 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 22180495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 30358648 - 30358604
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  30358648 tggtttctgtgagttgtactctaaaaccattagatgtacttaatg 30358604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 38010528 - 38010484
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  38010528 tggtttttgtgagttgtactccaaaaccattagatgtacttaatg 38010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 38563855 - 38563899
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  38563855 tggtttgtgtgagttgtactccaaaaccattagatgtacttaatg 38563899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 49137361 - 49137405
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  49137361 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 49137405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 50644514 - 50644470
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  50644514 tggtttctgtgagttgtactccaaaaccattagatttacttaatg 50644470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 53865237 - 53865193
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  53865237 tggtttctgtgagttgtactccaaaaccattagatatacttaatg 53865193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 638995 - 638948
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  638995 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 638948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 9551607 - 9551654
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccccaaa 149  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  9551607 cagctcattaactggtagcccaacataattgcttcctacacccccaaa 9551654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 21097930 - 21097887
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  21097930 tggtttatgtgagttgtactccaaaaccattagatgtacttaat 21097887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 24687196 - 24687142
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||| ||||||   |||||||||||| |||||||||||||||||    
T  24687196 tttcagagtgttgatttgattcaat---agtcacaaatgttcttattatagtatgttt 24687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 27764946 - 27764911
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    ||||||||||||||||||||||||||||||||||||    
T  27764946 tggtttctgtgagttgtactccaaaaccattagatg 27764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 34986939 - 34986896
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  34986939 cagcccattaaccggtagcccaacataattgcttcgtacacccc 34986896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 38245919 - 38245872
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  38245919 cccaacataattgtttcctacacccccaaagaaaaccaaacaaaacaa 38245872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 10374240 - 10374194
Alignment:
Q  263 tttggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  10374240 tttggtttctgtgagttgtattccaaaatcattagatgtacttaatg 10374194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 18923942 - 18923896
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  18923942 tggtttatgtgagttgtactccaaaatcattagatgtacttaatgat 18923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 18924073 - 18924031
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  18924073 gtttctgtgagttgtacttcaaaaccattagatgtacttaatg 18924031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 38010702 - 38010660
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  38010702 gtttatgtgagttgtactccaaaaccattagatgtacttaatg 38010660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 17109772 - 17109813
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  17109772 tttctgtgagttgtattccaaaaccattagatgtacttaatg 17109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 1492855 - 1492811
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||    
T  1492855 tggtttttgtgagttatactccaaaaccattagatgtacttaatg 1492811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 2124394 - 2124438
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  2124394 tggtttatgtgagttgtacttcaaaaccattagatgtacttaatg 2124438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 8165812 - 8165856
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| |||||||||||||||||  |||||||    
T  8165812 tggtttctgtgagttgtattccaaaaccattagatgtgcttaatg 8165856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 8165928 - 8165972
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| |||||||||||||||||  |||||||    
T  8165928 tggtttctgtgagttgtattccaaaaccattagatgtgcttaatg 8165972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 9812997 - 9813041
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||    
T  9812997 gtttctgtgagttgtactctaaaatcattagatgtacttaatgat 9813041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 20581924 - 20581992
Alignment:
Q  77 atcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||| ||||||||  |||||||  || ||||||||||||||| |||||||||||| ||| ||||||||    
T  20581924 atccttatgcaccttgcataaatcccaacccattaaccggtagtccaacataattgcttcgtacacccc 20581992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 25573707 - 25573751
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  25573707 tggtttttgtgagttgtactccaaaatcattagatgtacttaatg 25573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 27765077 - 27765033
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  27765077 tggtttgtgtgagttgtactccaaaatcattagatgtacttaatg 27765033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 31762979 - 31763023
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||    
T  31762979 tggtttttgtgagttgtactccaaaaccattagatatacttaatg 31763023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 33883344 - 33883388
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  33883344 tggtttttgtgagttgtactccaaaactattagatgtacttaatg 33883388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 36309611 - 36309571
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcactt 305  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  36309611 tggtttctgtgagttgtacttcaaaaccattagatgtactt 36309571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 54895577 - 54895533
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||    
T  54895577 tggtttctgtgagttgtatttcaaaaccattagatgtacttaatg 54895533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 6385802 - 6385837
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    |||||||| |||||||||||||||||||||||||||    
T  6385802 tggtttctatgagttgtactccaaaaccattagatg 6385837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 10473699 - 10473660
Alignment:
Q  50 ttgggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  10473699 ttgggagcggttatggtgcataaggaaatccttatgcacc 10473660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 45256896 - 45256849
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  45256896 cccaacataattgcttcctacacccccaaaggaaactaaacaaaacaa 45256849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 1492750 - 1492720
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  1492750 tggtttctgtgagttgtactccaaaaccatt 1492720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 8166044 - 8166074
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  8166044 tggtttctgtgagttgtactccaaaaccatt 8166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 12722904 - 12722934
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  12722904 tggtttctgtgagttgtactccaaaaccatt 12722934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 16474986 - 16475016
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  16474986 tggtttctgtgagttgtactccaaaaccatt 16475016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 21995748 - 21995718
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  21995748 tggtttctgtgagttgtactccaaaaccatt 21995718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 26577257 - 26577307
Alignment:
Q  53 ggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttca 103  Q
    |||||||| |||||||||||||||||||| |||||||   |||||||||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttca 26577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 29825937 - 29825971
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagat 299  Q
    ||||||||||||||| |||||||||||||||||||    
T  29825937 tggtttctgtgagttctactccaaaaccattagat 29825971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 29826070 - 29826100
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  29826070 tggtttctgtgagttgtactccaaaaccatt 29826100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 31763074 - 31763104
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  31763074 tggtttctgtgagttgtactccaaaaccatt 31763104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 38010571 - 38010541
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  38010571 tggtttctgtgagttgtactccaaaaccatt 38010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 38563927 - 38563957
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  38563927 tggtttctgtgagttgtactccaaaaccatt 38563957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 50644380 - 50644350
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  50644380 tggtttctgtgagttgtactccaaaaccatt 50644350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 54895482 - 54895452
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  54895482 tggtttctgtgagttgtactccaaaaccatt 54895452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 4169030 - 4168997
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  4169030 agttgtactccaaaaccattagatgtacttaatg 4168997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 8157167 - 8157204
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  8157167 tgtgagttgtactccaaaatcattagatgtacttaatg 8157204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 26577306 - 26577351
Alignment:
Q  122 caacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  26577306 caacataattgcttcctacacccccaaaggaaacaaaacaaaacaa 26577351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 45256944 - 45256907
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  45256944 gggagcggttatggtgcataaggaaatccttatgcacc 45256907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 51836581 - 51836614
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  51836581 agttgtactccaaaaccattagatgtacttaatg 51836614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 1728854 - 1728898
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| | |||||||||||| |||||||||||||| ||||||||    
T  1728854 tggtttttatgagttgtactcgaaaaccattagatgtacttaatg 1728898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 4169217 - 4169173
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | ||||||||||||||  ||||||||    
T  4169217 tggtttctgtgagttgtagtacaaaaccattagatatacttaatg 4169173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 6768591 - 6768547
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| |||||||| |||| ||| ||||||||    
T  6768591 tggtttctgtgagttgtattccaaaactattatatgtacttaatg 6768547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 27872870 - 27872914
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | |||||| |||||||| ||||||||    
T  27872870 tggtttctgtgagttgtatttcaaaactattagatgtacttaatg 27872914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 53526446 - 53526402
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||| ||||||||| | ||||||    
T  53526446 tggtttctatgagttgtactccaaaatcattagatgtatttaatg 53526402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 93 - 265
Target Start/End: Complemental strand, 47729190 - 47729019
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcatt 192  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||| |    
T  47729190 cataaatcccagcccattaaccggtagcccaacataattgcttcctacacccccaaacgaaaccaaacgaaacaacactacaaccgtggaaatcatca-t 47729092  T
Q  193 ttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47729091 ttagttcaatgatgatttcagagtgttgatttggttcaatgacagtaacaaatgtccttattatagtatgttt 47729019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 23700137 - 23699939
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    |||||||||||||||| ||||| |    ||||||  |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23700137 tgcataaggaaatccttatgcatcgtggataaatcccagcccattaaccg-tagcccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23700039  T
Q  166 aacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23700038 aacactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgatagtcacaaatgtccttattatagtatgttt 23699939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 23718592 - 23718394
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    |||||||||||||||| ||||| |    ||||||  |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23718592 tgcataaggaaatccttatgcatcgtggataaatcccagcccattaaccg-tagcccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23718494  T
Q  166 aacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23718493 aacactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgatagtcacaaatgtccttattatagtatgttt 23718394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 23737048 - 23736850
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    |||||||||||||||| ||||| |    ||||||  |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  23737048 tgcataaggaaatccttatgcatcgtggataaatcccagcccattaaccg-tagcccaacataattgcttcctacacccccaagcgaaaccaaacgaaac 23736950  T
Q  166 aacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23736949 aacactacaaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgatagtcacaaatgtccttattatagtatgttt 23736850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 16276663 - 16276886
Alignment:
Q  51 tgggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc----- 145  Q
    |||||||||| ||||||||||| |||||||| |||||||   |||||||   |||||||||||||||||||||||||||||| ||||||||||||         
T  16276663 tgggagcggttatggtgcataaagaaatccttatgcaccgtgcataaatccaagcccattaaccggtagcccaacataattgcttcctacaccccaagcg 16276762  T
Q  146 ----caaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcac 241  Q
        |||||||||| ||||||||||||| |||||     ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16276763 aaaccaaacgaaacaaaacgaaacaacattacaatcgcggaaatcatcattttagttcaatgttgatttcagagtgttgatttggttcaatgacagtcac 16276862  T
Q  242 aaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||    
T  16276863 aaatgtccttattatagtatgttt 16276886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 8719186 - 8718963
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||||||||||||||||||| |||||||   |||||||  || |||||| |||||||||||| |||||||| |||||||||||| || ||    
T  8719186 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacccattgaccggtagcccagcataattgcttcctacacccctaagcg 8719087  T
Q  152 aaaccaaacgaaacaa----------cactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcac 241  Q
    ||||||||||||||||          |||||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8719086 aaaccaaacgaaacaaaatgaagcaacactacaaccgcgaaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcac 8718987  T
Q  242 aaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||    
T  8718986 aaatgtccttattatagtatgttt 8718963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 9071073 - 9070850
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||||||||||||||||||| |||||||   |||||||  || |||||| |||||||||||| |||||||| |||||||||||| || ||    
T  9071073 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacccattgaccggtagcccagcataattgcttcctacacccctaagcg 9070974  T
Q  152 aaaccaaacgaaacaa----------cactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcac 241  Q
    ||||||||||||||||          |||||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9070973 aaaccaaacgaaacaaaatgaagcaacactacaaccgcgaaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcac 9070874  T
Q  242 aaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||    
T  9070873 aaatgtccttattatagtatgttt 9070850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 41191475 - 41191604
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| ||||| |||||||||||||||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  41191475 cctacacctccaagcgaaatcaaacgaaacaacactacaaccgtagaaatcatcattttagttcaataatgatttcagagtattgatttggttcaatgac 41191574  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  41191575 agtcacaaatgtccttattatagtatgttt 41191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 34562465 - 34562594
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| |||||||||||||||||| ||||||||  | |||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  34562465 cctacacctccaagcgaaaccaaacgaaacaatactacaaccttggaaatcatcattttagttcaataatgatttcagagtattgatttggttcaatgac 34562564  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  34562565 agtcacaaatgtccttattatagtatgttt 34562594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 264
Target Start/End: Complemental strand, 23756332 - 23756124
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcc-tacacccccaaacgaaaccaaacgaaa 164  Q
    |||||||||||||||| |||||||    ||||||  |||||||||||| | |||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  23756332 tgcataaggaaatccttatgcaccgtggataaatcccagcccattaactg-tagcccaacataattgcttccctacacccccaagcgaaaccaaacgaaa 23756234  T
Q  165 caa----------cactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttatt 254  Q
    |||          |||||||||   | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23756233 caaaacgaaacaacactacaaccgcaaaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgatagtcacaaatgtccttatt 23756134  T
Q  255 atagtatgtt 264  Q
    ||| ||||||    
T  23756133 ataatatgtt 23756124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 51681224 - 51681407
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgt--ttcctacacccccaaacgaaaccaaa----------cgaaacaacactacaactata 180  Q
    |||||||  |||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||          |||||||||||||||||        
T  51681224 cataaatcacagcccattaaccggtagcccaacataattttgcttcctacacccccaagcgaaaccaaatgaaacaaaacgaaacaacactacaacagcg 51681323  T
Q  181 gaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  51681324 gaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgagagtcacaaatgt-cttattatagtatgttt 51681407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 28299400 - 28299454
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  28299400 tttcagagtgttgatttggttcaat---agtcacaaatgtccttattatagtatgttt 28299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 51846155 - 51846202
Alignment:
Q  218 ttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51846155 ttgatttggttcaatgacagtcacagatgtccttattatagtatgttt 51846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 36185776 - 36185820
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  36185776 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 36185820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 53595468 - 53595424
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  53595468 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 53595424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 9642988 - 9643026
Alignment:
Q  227 ttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9642988 ttcaatgacagtcacaaatgtccttattatagtatgttt 9643026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 21175260 - 21175218
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  21175260 gtttctgtgagttgtactccaaaaccattagatgtacttaatg 21175218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 39194577 - 39194623
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  39194577 tggtttatgtgagttgtactccaaaaccattagatgtacttaatgat 39194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 38345471 - 38345430
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  38345471 tttctgtgagttgtactccaaaaccattagatgtacttaatg 38345430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 8718925 - 8718881
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  8718925 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 8718881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 9070812 - 9070768
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  9070812 tggtttctgtgagttgtactccaaaatcattagatgtacttaatg 9070768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 9183790 - 9183834
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  9183790 tggtttctgtgagttgtactccaaaaccattagatgtactaaatg 9183834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 16276925 - 16276969
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  16276925 tggtttctgtgagttgtactccaaaactattagatgtacttaatg 16276969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23699901 - 23699857
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  23699901 tggtttctgtgagttgtattccaaaaccattagatgtacttaatg 23699857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23718356 - 23718312
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  23718356 tggtttctgtgagttgtattccaaaaccattagatgtacttaatg 23718312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23736812 - 23736768
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  23736812 tggtttctgtgagttgtattccaaaaccattagatgtacttaatg 23736768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 23756081 - 23756041
Alignment:
Q  269 ttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  23756081 ttctgtgagttgtactccaaaaccattagatgtacttaatg 23756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 34562632 - 34562676
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  34562632 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 34562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 47728981 - 47728937
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  47728981 tggtttctatgagttgtactccaaaaccattagatgtacttaatg 47728937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 51681445 - 51681489
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  51681445 tggtttctgtgagttgtactccaaaaccatgagatgtacttaatg 51681489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 19384424 - 19384471
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  19384424 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 19384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 50755193 - 50755146
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  50755193 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 50755146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 51846242 - 51846284
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  51846242 gtttctgtcagttgtactccaaaaccattagatgtacttaatg 51846284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 17621383 - 17621428
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||    
T  17621383 tttcagagtgttgatttagttcaatggctgtcacaaatgtccttat 17621428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 17628566 - 17628611
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||    
T  17628566 tttcagagtgttgatttagttcaatggctgtcacaaatgtccttat 17628611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 51846095 - 51846148
Alignment:
Q  145 ccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagtt 198  Q
    |||| |||||||||| ||||||||||||||||  | ||||||||||||||||||    
T  51846095 ccaagcgaaaccaaaagaaacaacactacaacagtggaaatcatcattttagtt 51846148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 47924215 - 47924259
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  47924215 tggtttctgtgagttgtacttcaataccattagatgtacttaatg 47924259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 49053275 - 49053319
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||    
T  49053275 tggtttctgtgagttgtacttcaaaactattagatgtacttaatg 49053319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 47225842 - 47225807
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    ||||||||||||||||||||| ||||||||||||||    
T  47225842 tggtttctgtgagttgtactctaaaaccattagatg 47225807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 9179581 - 9179619
Alignment:
Q  271 ctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  9179581 ctgtgagttgtactccaaaaccattagatgtactaaatg 9179619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 19012556 - 19012526
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  19012556 tggtttctgtgagttgtactccaaaaccatt 19012526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 23755952 - 23755922
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  23755952 tggtttctgtgagttgtactccaaaaccatt 23755922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 28299535 - 28299565
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  28299535 tggtttctgtgagttgtactccaaaaccatt 28299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 34562767 - 34562797
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  34562767 tggtttctgtgagttgtactccaaaaccatt 34562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 37319082 - 37319124
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||| |||||||| |||||||||||||||||||| ||||||||    
T  37319082 gtttttgtgagttctactccaaaaccattagatgtacttaatg 37319124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 51361517 - 51361555
Alignment:
Q  51 tgggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  51361517 tgggagcggttatggtgcataaggaaatccttatgcacc 51361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 28299257 - 28299313
Alignment:
Q  107 cattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaa 164  Q
    |||||||||||||| |||||||||||||||||| || |  ||| ||||||||||||||    
T  28299257 cattaaccggtagctcaacataattgtttccta-actcttaaaggaaaccaaacgaaa 28299313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Original strand, 28299578 - 28299611
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattaga 298  Q
    ||||||| ||||||||||||||||||||||||||    
T  28299578 tggtttccgtgagttgtactccaaaaccattaga 28299611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 32233794 - 32233757
Alignment:
Q  94 ataaatttcagcccattaaccggtagcccaacataatt 131  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  32233794 ataaatctcagtccattaaccggtagcccaacataatt 32233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 47335163 - 47335134
Alignment:
Q  120 cccaacataattgtttcctacacccccaaa 149  Q
    ||||||||||||||||||||||||||||||    
T  47335163 cccaacataattgtttcctacacccccaaa 47335134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 8036850 - 8036894
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||||    
T  8036850 tggtttttgtgagttatacttcaaaaccattagatgtacttaatg 8036894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 8718792 - 8718748
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||    
T  8718792 tggtttttgtgagttgtactccaaaattattagatgtacttaatg 8718748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 9070679 - 9070635
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||    
T  9070679 tggtttttgtgagttgtactccaaaattattagatgtacttaatg 9070635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 9639885 - 9639937
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||  ||||||||||||||||||| ||||||||||  ||| ||||||||    
T  9639885 cataaatcccagcccattaaccggtagctcaacataattacttcgtacacccc 9639937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 23755909 - 23755881
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  23755909 tggtttctgtgagttgtactccaaaacca 23755881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 30795043 - 30794999
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||    
T  30795043 tggtttctgtgagttgtattccaaaatcattagttgtacttaatg 30794999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 41191642 - 41191686
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| || |||||    
T  41191642 tggtttttgtgagttgtactccaaaatcattagatgtacataatg 41191686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 132; Significance: 2e-68; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 54 - 265
Target Start/End: Original strand, 202909 - 203120
Alignment:
Q  54 gagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaa 153  Q
    ||||||| |||||||||||||||||| | |||||||   || ||||  ||| ||||||||||||||||||||||||||| |||||||||||| || | ||    
T  202909 gagcggttatggtgcataaggaaatcattatgcaccgtgcacaaatcccagtccattaaccggtagcccaacataattgcttcctacacccctaagcaaa 203008  T
Q  154 accaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    |||||||||||||||||||| ||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  203009 accaaacgaaacaacactacgaccgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 203108  T
Q  254 tatagtatgttt 265  Q
    ||||||||||||    
T  203109 tatagtatgttt 203120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 203160 - 203202
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  203160 gtttctgtgagttgtactccaaaactattagatgtacttaatg 203202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 203292 - 203336
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||    
T  203292 tggtttctgtgagttgtactccaaaaccattaaatatacttaatg 203336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 203346 - 203381
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatgat 311  Q
    ||||||||||||||||||||||||| ||||||||||    
T  203346 agttgtactccaaaaccattagatgtacttaatgat 203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 52 - 265
Target Start/End: Original strand, 15259850 - 15260066
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| |||| ||||||||||||||| |||||||   |||||||  || | ||||||||| |||||||||||||||||||| ||||||||||| ||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaactcattaaccgatagcccaacataattgtttcatacacccccaagcg 15259949  T
Q  152 aaaccaaacgaaacaacactacaactatagaaatcatcattttagttc---aatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtc 248  Q
    |||||||||||||||||||||||||    |||||||||||||||||||   |||||| |||||||| ||||||||||||||||| | ||||||||||||     
T  15259950 aaaccaaacgaaacaacactacaaccgcggaaatcatcattttagttcaataatgatgatttcagaatgttgatttggttcaataatagtcacaaatgtt 15260049  T
Q  249 cttattatagtatgttt 265  Q
    ||||||||| |||||||    
T  15260050 cttattatattatgttt 15260066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 24472991 - 24473173
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc----------caaacgaaaccaaacgaaacaacactacaactataga 182  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||          |||||||||  ||||||||||||||||||||    ||    
T  24472991 cataaatctcagcccattaaccggtagtccaacataattgcttcctacacccctaagcgaaatcaaacgaaataaaacgaaacaacactacaaccgcgga 24473090  T
Q  183 aatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24473091 aatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacaatcacaaatgtctttattatagtatgttt 24473173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 39023048 - 39022826
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacaccccca---- 147  Q
    ||||||||| ||||||||||||||||| || || ||||    |||||| |||| | ||||| ||||||| ||||||||||| |||||||||||| |        
T  39023048 gggagcggttatggtgcataaggaaattcttatacaccgtgtataaatctcagactattaatcggtagctcaacataattgcttcctacaccccaagtga 39022949  T
Q  148 -----aacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcaca 242  Q
         |||||||| || |||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  39022948 aactgaacgaaacaaatcgaaacaacactacaaccgcagaaatcatcattttagttcaatgatgatttcagagtgttgatttgattcaatgacagtcaca 39022849  T
Q  243 aatgtccttattatagtatgttt 265  Q
    ||||| |||||||||||||||||    
T  39022848 aatgttcttattatagtatgttt 39022826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 23397421 - 23397292
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    ||||||||  ||| |||||||||||||||||||||||||||  | |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  23397421 cctacaccttcaagcgaaaccaaacgaaacaacactacaaccgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgac 23397322  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||| |||||||||||||||||||    
T  23397321 agtcacaaatatccttattatagtatgttt 23397292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 35301695 - 35301824
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| |||||||||||||| ||||||||||||  | |||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  35301695 cctacacctccaagcgaaaccaaacgaaccaacactacaaccgtggaaatcatcattttagttcaataatgatttcagagtattgatttggttcaatgac 35301794  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  35301795 agtcacaaatgtccttattatagtatgttt 35301824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 34647237 - 34647366
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||||| |||| |||||||||||||||||||| ||||||  | |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  34647237 cctacacctccaagcgaaaccaaacgaaacaacaatacaaccgtggaaatcatcattttagttcaataatgatttcagagtgttgatttggttcaatgac 34647336  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||| ||||| |||||||    
T  34647337 agtcacaaatgtccttgttatattatgttt 34647366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 45409516 - 45409686
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcatt 192  Q
    |||||||  ||| |||||||| |||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||     |||||||||||    
T  45409516 cataaatcccagtccattaactggtagcgcaacataattgcttcctacacccc-aagcgaaaccaaacgaaacaacactacaaccgcgaaaatcatcatt 45409614  T
Q  193 ttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||| |||||  |||||||||||||||||||    
T  45409615 ttagttcaatgatgatttcagagtgttgacttgattcaatgacagttacaaa-atccttattatagtatgttt 45409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 40022454 - 40022583
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||||| | |||| |||||||||||||||||||||||||||  | |||||||||||||| ||||||| || |||||| |||| |||||||||||||||||    
T  40022454 cctacatctccaagcgaaaccaaacgaaacaacactacaaccgtggaaatcatcatttttgttcaataatgatttcaaagtgctgatttggttcaatgac 40022553  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  40022554 agtcacaaatgtccttattatagtatgttt 40022583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 35448546 - 35448421
Alignment:
Q  102 cagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaa 201  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||||    ||||| |||||||||||||||    
T  35448546 cagcccattaaccggtagcccaacttaattgcttcctacactcccaagcgaaaccaaacgaaacaacactacaac-cgcgaaataatcattttagttcaa 35448448  T
Q  202 tgataatttcagagtgttgatttggtt 228  Q
    |||| ||||||||||||||||||||||    
T  35448447 tgatgatttcagagtgttgatttggtt 35448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 9853234 - 9853105
Alignment:
Q  136 cctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgac 235  Q
    |||| ||| |||| |||||||||||||||||| ||||||||  | ||| |||||||||||||| ||| || |||||||| ||||||||||||||||||||    
T  9853234 cctatacctccaagcgaaaccaaacgaaacaatactacaaccgtggaagtcatcattttagtttaataatgatttcagaatgttgatttggttcaatgac 9853135  T
Q  236 agtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||    
T  9853134 agtcacaaatgtccttattatagtatgttt 9853105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 7614778 - 7614668
Alignment:
Q  155 ccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttatt 254  Q
    |||| |||||||| |||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  7614778 ccaagcgaaacaaaactacaactgcggaaatcatcattttagttcaatgatgatttcagagtgttgatttggttaaatgacaatcacaaatgtccttatt 7614679  T
Q  255 atagtatgttt 265  Q
    |||||||||||    
T  7614678 atagtatgttt 7614668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 35448422 - 35448350
Alignment:
Q  193 ttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35448422 ttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattataatatgttt 35448350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 1672478 - 1672421
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1672478 tttcagagtgttgatttggttcaatgacagtcgcaaatgtccttattatattatgttt 1672421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 1672803 - 1672712
Alignment:
Q  69 ataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctaca-cccccaaacgaaaccaaa 159  Q
    ||||||||||||| |||||||   |||||||  |||||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||    
T  1672803 ataaggaaatccttatgcaccgtgcataaatcccagcccattaaccggtagcccaacataactgtttccaacaccccccaaaggaaaccaaa 1672712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 17656812 - 17656768
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  17656812 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 17656768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23397254 - 23397210
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23397254 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 23397210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 39022655 - 39022611
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  39022655 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 39022611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 7614627 - 7614586
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  7614627 tttctgtgagttgtactccaaaaccattagatgtacttaatg 7614586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 2541049 - 2541093
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  2541049 tggtttctgtgagttgtactccaaaactattagatgtacttaatg 2541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 10585910 - 10585954
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  10585910 tggtttctatgagttgtactccaaaaccattagatgtacttaatg 10585954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 15809834 - 15809790
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  15809834 tggtttctctgagttgtactccaaaaccattagatgtacttaatg 15809790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18026960 - 18026916
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  18026960 tggtttctgtgagttggactccaaaaccattagatgtacttaatg 18026916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18161483 - 18161439
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  18161483 tggtttctgtgagttgtattccaaaaccattagatgtacttaatg 18161439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 40022621 - 40022665
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  40022621 tggtttctgtgagttgtactccaaaactattagatgtacttaatg 40022665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 45409456 - 45409500
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  45409456 tggtttctttgagttgtactccaaaaccattagatgtacttaatg 45409500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 1672380 - 1672339
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  1672380 tttctgtgagttgtactctaaaaccattagatgtacttaatg 1672339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 2751236 - 2751191
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  2751236 cccaacataattgcttcctacacccccaaacgaaatcaaacaaaac 2751191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 13526247 - 13526291
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||| |||||  |||||||    
T  13526247 tggtttctgtgagttgtactccaaaaccataagatgtgcttaatg 13526291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 13615782 - 13615826
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||| |||||  |||||||    
T  13615782 tggtttctgtgagttgtactccaaaaccataagatgtgcttaatg 13615826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18022636 - 18022592
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||    
T  18022636 tggtttatgtgagttgtactccaaaaccattagatgtactaaatg 18022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 23940678 - 23940718
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  23940678 tttctttgagttgtactccaaaaccattagatgtacttaat 23940718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 28698108 - 28698152
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  28698108 tggtttctgtgagttggactccaaaatcattagatgtacttaatg 28698152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 34343445 - 34343401
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||    
T  34343445 tggtttctatgagttgtattccaaaaccattagatgtacttaatg 34343401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 35301862 - 35301906
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  35301862 tggtttatgtgagttgtactccaaaaccattatatgtacttaatg 35301906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 39022788 - 39022744
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||    
T  39022788 tggtttctgtgagttgtactctaagaccattagatgtacttaatg 39022744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 2523581 - 2523538
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    |||||| |||||||||||||||||||| |||||||| |||||||    
T  2523581 tggtttatgtgagttgtactccaaaactattagatgtacttaat 2523538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 4835561 - 4835608
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  4835561 cccaacataattgcttcctacacccccaaagaaaaccaaacaaaacaa 4835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 4841006 - 4841053
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  4841006 cccaacataattgcttcctacacccccaaagaaaaccaaacaaaacaa 4841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 185959 - 185929
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  185959 tggtttctgtgagttgtactccaaaaccatt 185929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 10586027 - 10586057
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  10586027 tggtttctgtgagttgtactccaaaaccatt 10586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 17656696 - 17656666
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  17656696 tggtttctgtgagttgtactccaaaaccatt 17656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 34647537 - 34647567
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  34647537 tggtttctgtgagttgtactccaaaaccatt 34647567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 40022754 - 40022784
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  40022754 tggtttctgtgagttgtactccaaaaccatt 40022784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 295
Target Start/End: Original strand, 2541156 - 2541185
Alignment:
Q  266 ggtttctgtgagttgtactccaaaaccatt 295  Q
    ||||||||||||||||||||||||||||||    
T  2541156 ggtttctgtgagttgtactccaaaaccatt 2541185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 2750771 - 2750738
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  2750771 agttgtactccaaaaccattagatgtacttaatg 2750738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 4835513 - 4835550
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacc 89  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  4835513 gggagcggttatggtgcataaggaaatccttatgcacc 4835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 7058854 - 7058821
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  7058854 agttgtactccaaaaccattagatgtacttaatg 7058821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 9853067 - 9853022
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatga 310  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||    
T  9853067 tggtttttgtgagttgtactccaaaactattagatatacttaatga 9853022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 12356116 - 12356075
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||  ||||||||||||||||||| ||||||||    
T  12356116 tttctgtgagtttgactccaaaaccattagatgtacttaatg 12356075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 15260237 - 15260278
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcactta 306  Q
    ||||||||||||||||| |||||||||| ||||||| |||||    
T  15260237 tggtttctgtgagttgttctccaaaacctttagatgtactta 15260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 23504550 - 23504587
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  23504550 tgtgagttgtactccaaaatcattagatgtacttaatg 23504587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 1672208 - 1672180
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  1672208 tggtttctgtgagttgtactccaaaacca 1672180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 1672925 - 1672881
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | ||||||||||||||| | ||||||    
T  1672925 tggtttctgtgagttgtatttcaaaaccattagatgtatttaatg 1672881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 1773140 - 1773184
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||| ||||||||| | ||||||    
T  1773140 tggtttttgtgagttgtactccaaaatcattagatgtatttaatg 1773184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 8439049 - 8439093
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | |||||| |||||||| ||||||||    
T  8439049 tggtttctgtgagttgtatttcaaaactattagatgtacttaatg 8439093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 17230364 - 17230328
Alignment:
Q  273 gtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||| | ||||||    
T  17230364 gtgagttgtactccaaaaccattagatgtatttaatg 17230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 17792742 - 17792786
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| |||||||||| |||||||||||||||| | ||||||    
T  17792742 tggtttctttgagttgtacgccaaaaccattagatgtatttaatg 17792786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 24472931 - 24472975
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||| |||| |||| ||||||||||||||| ||||||||    
T  24472931 tggtttctgtaagttatacttcaaaaccattagatgtacttaatg 24472975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 27506756 - 27506800
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||| ||||||| ||||||||||||||||| ||||||||    
T  27506756 tggtttatgtaagttgtattccaaaaccattagatgtacttaatg 27506800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 27506874 - 27506902
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||    
T  27506874 gtttctgtgagttgtactccaaaaccatt 27506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 34647404 - 34647448
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  34647404 tggtttatgtaagttgtactccaaaaccatcagatgtacttaatg 34647448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 35448604 - 35448560
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||    
T  35448604 tggtttatgtgagttgtactccaaaattattagatgtacttaatg 35448560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Original strand, 40246618 - 40246646
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  40246618 tggtttctgtgagttgtactccaaaacca 40246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 42434387 - 42434343
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||| |||||||  ||||||||    
T  42434387 tggtttatgtgagttgtactccaaaactattagatttacttaatg 42434343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 109; Significance: 8e-55; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 93 - 265
Target Start/End: Complemental strand, 14629 - 14458
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcatt 192  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||||| || || |||||||||||||||||||||||||||     |||||||||||    
T  14629 cataaatctcagcccattaaccggtagttcaacataattgcttcctacactcctaagcgaaaccaaacgaaacaacactacaaccgcgaaaatcatcatt 14530  T
Q  193 ttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14529 t-agttcaatgatgatttcagagtgttgatttggttcaatgacagtcataaatgtccttattatagtatgttt 14458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 14287 - 14243
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14287 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 14243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 14420 - 14376
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  14420 tggtttctgtgagttgtactccaaaaccattagatttacttaatg 14376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 93 - 265
Target Start/End: Complemental strand, 20710790 - 20710619
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcatt 192  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||||| || || |||||||||||||||||||||||||||     |||||||||||    
T  20710790 cataaatctcagcccattaaccggtagttcaacataattgcttcctacactcctaagcgaaaccaaacgaaacaacactacaaccgcgaaaatcatcatt 20710691  T
Q  193 ttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20710690 t-agttcaatgatgatttcagagtgttgatttggttcaatgacagtcataaatgtccttattatagtatgttt 20710619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 265
Target Start/End: Original strand, 41345142 - 41345282
Alignment:
Q  126 ataattgtttcct-acacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgattt 224  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||   | |||||||||||||||||||||| || |||||||||| |||||||    
T  41345142 ataattgtttccttacacctccaagcgaaaccaaacgaaacaacactacaatcgtggaaatcatcattttagttcaataatgatttcagagtattgattt 41345241  T
Q  225 ggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  41345242 ggttcaatgacagtcacaaatgtctttattatagtatgttt 41345282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 36636080 - 36636138
Alignment:
Q  207 atttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36636080 atttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 36636138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 4280975 - 4281028
Alignment:
Q  212 agagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4280975 agagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 4281028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 25996124 - 25996028
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacc-cccaaacgaaaccaaacg 161  Q
    ||||||||||||| || | |||||   |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  25996124 tgcataaggaaattcttaagcaccgtgcataaattccaacccattaaccggtagcccaacataattgtttcctacacctcccaaaggaaaccaaacg 25996028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 36635764 - 36635859
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    ||||||| |||||||| |||||||   ||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||  || |||||||||||    
T  36635764 tgcataaagaaatccttatgcaccgtgcataaatctcagcccattaaccggtagcccaacataattgcttcatacactcctgaatgaaaccaaacg 36635859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 43823583 - 43823538
Alignment:
Q  216 tgttgatttggttcaatgacagtcacaaatgtccttattatagtat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43823583 tgttgatttggttcaatgacagtcacaaatgtccttattatagtat 43823538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 20710448 - 20710404
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20710448 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 20710404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 43823910 - 43823813
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacaccc--ccaaacgaaaccaaacg 161  Q
    |||||||||||||||| |||||||   |||||||  |||||||||| ||||||| |||||| ||||| |||||||||||  ||||| |||||||||||    
T  43823910 tgcataaggaaatccttatgcaccgtgcataaatcccagcccattatccggtagtccaacacaattgcttcctacacccctccaaaggaaaccaaacg 43823813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 4280682 - 4280775
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaa 159  Q
    |||||||| ||||| | |||||||   ||||||||  ||| |||||| ||||||||||||||||||| |||||||||||  ||| |||||||||    
T  4280682 tgcataagaaaatctttatgcaccgtgcataaattctagctcattaatcggtagcccaacataattgcttcctacacccgtaaaggaaaccaaa 4280775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 3928242 - 3928198
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  3928242 tggtttctgtgagttggactccaaaaccattagatgtacttaatg 3928198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 4281066 - 4281110
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  4281066 tggtttctgtgagttatactccaaaaccattagatgtacttaatg 4281110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 12449104 - 12449148
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  12449104 tggtttttgtgagttgtactccaaaaccattagatgtacttaatg 12449148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 20710581 - 20710537
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  20710581 tggtttctgtgagttgtactccaaaaccattagatatacttaatg 20710537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 30777345 - 30777389
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  30777345 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 30777389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 41345320 - 41345364
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  41345320 tggtttatgtgagttgtactccaaaaccattagatgtacttaatg 41345364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 42364687 - 42364643
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  42364687 tggtttctgttagttgtactccaaaaccattagatgtacttaatg 42364643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 18297211 - 18297258
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  18297211 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 18297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 2264654 - 2264608
Alignment:
Q  121 ccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||    
T  2264654 ccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaa 2264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 3926187 - 3926146
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  3926187 tttctgtgagttgtactccaaaaccattagatgtactaaatg 3926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 22596353 - 22596398
Alignment:
Q  264 ttggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  22596353 ttggtttctgtgaattgtactacaaaaccattagatgtacttaatg 22596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 13081340 - 13081384
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||    
T  13081340 tggtttctgtgagttgtatttcaaaaccattagatgtacttaatg 13081384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 16111698 - 16111654
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  16111698 tggtttttgtgagttgtactccaaaaccattaaatgtacttaatg 16111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 24023989 - 24024041
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||  |||||||||||| |||||||||||||||||| ||| ||||||||    
T  24023989 cataaatcacagcccattaactggtagcccaacataattgcttcttacacccc 24024041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 31711693 - 31711649
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||    
T  31711693 tggtttttgtgagttgtactccaaaaccattagatgtatttaatg 31711649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 31783976 - 31783932
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||    
T  31783976 tggtttctgtgagttgtactaaaaaaccattagatgtacttaatg 31783932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 36636176 - 36636220
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||    
T  36636176 tggtttttgtgagttgtactccaaaaccattagatgtatttaatg 36636220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 43823494 - 43823450
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||    
T  43823494 tggtttatgtgagttgtactccaaaactattagatgtacttaatg 43823450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 44341911 - 44341955
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||    
T  44341911 tggtttctgtgagttggactccaaaaccattaaatgtacttaatg 44341955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 20661446 - 20661489
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaat 308  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  20661446 tggtttttgtgagttgtattccaaaaccattagatgtacttaat 20661489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 25193992 - 25193945
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa 167  Q
    ||||| |||||||||||||||||||||||| ||||| |||| ||||||    
T  25193992 cccaatataattgtttcctacacccccaaaggaaacaaaacaaaacaa 25193945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 28478248 - 28478205
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccccaa 148  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||    
T  28478248 cccattaactggtagcccaacataattgcttcctacacctccaa 28478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 1095334 - 1095364
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  1095334 tggtttctgtgagttgtactccaaaaccatt 1095364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 30777492 - 30777522
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  30777492 tggtttctgtgagttgtactccaaaaccatt 30777522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 31711588 - 31711558
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  31711588 tggtttctgtgagttgtactccaaaaccatt 31711558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 42364570 - 42364540
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  42364570 tggtttctgtgagttgtactccaaaaccatt 42364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 36636359 - 36636396
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  36636359 tgtgagttgtacttcaaaaccattagatgtacttaatg 36636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 44915348 - 44915385
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  44915348 tgtgagttgtactccaaaaccattaaatgtacttaatg 44915385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 23226024 - 23225980
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| |||||| | |||||||| ||||||||    
T  23226024 tggtttctgtgagttgtattccaaagctattagatgtacttaatg 23225980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 24183447 - 24183487
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcactt 305  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  24183447 tggtttatgtgagttgtattccaaaaccattagatgtactt 24183487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 28049171 - 28049135
Alignment:
Q  273 gtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||| | ||||||    
T  28049171 gtgagttgtactccaaaaccattagatgtatttaatg 28049135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 28055994 - 28056022
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||    
T  28055994 gtttctgtgagttgtactccaaaaccatt 28056022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 34726654 - 34726698
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||| ||||||||||||||| || |||||    
T  34726654 tggtttctatgagttgtacttcaaaaccattagatgtacataatg 34726698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 37867349 - 37867305
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  37867349 tggtttctgtgagttatactccaaaactattagatatacttaatg 37867305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 28724 - 28501
Alignment:
Q  52 gggagcggtcatggtgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacg 151  Q
    ||||||||| ||||||||||||||||||||  ||||||   | |||||  ||||||||| |  |||||||||||||||||| ||||||||||||||| ||    
T  28724 gggagcggttatggtgcataaggaaatccttttgcaccgtgcttaaatcccagcccattgattggtagcccaacataattgcttcctacacccccaagcg 28625  T
Q  152 aaaccaaacgaaacaa----------cactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcac 241  Q
    ||||||||||||||||          ||||||||      |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28624 aaaccaaacgaaacaaaacgaaacaacactacaatcgcgaaaatcatcattttagttcaatgatgatttcagagtgttgatttggttcaatgacagtcac 28525  T
Q  242 aaatgtccttattatagtatgttt 265  Q
    ||||||||| ||||| ||||||||    
T  28524 aaatgtcctcattatggtatgttt 28501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 28330 - 28286
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  28330 tggtttctctgagttgtactccaaaaccattagatgtacttaatg 28286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 28463 - 28419
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  28463 tggtttctgtgagttgtactccaaaaccattatatgtacttaatg 28419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 25119216 - 25119398
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa----------cactacaactataga 182  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||  ||||||| ||||||||||||||||||          |||||||||    ||    
T  25119216 cataaatctcagcccattaaccggtagctcaacataattgcttcctatgcccccaagcgaaaccaaacgaaacaaaacgaaacaacactacaaccgcgga 25119315  T
Q  183 aatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25119316 aatcatcattttagttcaatgatgatttaagagtgttgatttggttcaatgacagtcacaaatgtctttattatagtatgttt 25119398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 7765393 - 7765253
Alignment:
Q  126 ataattgtttcc-tacacccccaaacgaaaccaaacgaaacaacactacaactatagaaatcatcattttagttcaatgataatttcagagtgttgattt 224  Q
    |||||||||||| |||| | ||||  ||||||||||||||||||||||||||  | |||||||||||||||||||||| || ||||||||||||||||||    
T  7765393 ataattgtttccctacatctccaagtgaaaccaaacgaaacaacactacaaccgtggaaatcatcattttagttcaataatgatttcagagtgttgattt 7765294  T
Q  225 ggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  7765293 ggttcaataacagtcgcaaatgtccttattatagtatgttt 7765253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 10588709 - 10588875
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaa----------acgaaaccaaacgaaacaacactacaactataga 182  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||||| ||||||||          ||||||| ||||||||||||||||||||     |    
T  10588709 cataaatctcagtccattaac-ggtagcccaacataattgcttcctatacccccaagcaaaaccaaacgaaacaaaacgaaacaacactacaaccgcgaa 10588807  T
Q  183 aatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtcct 250  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  10588808 aatcatcattttagttcaatgatgattttagagtgttgacttggttcaatgacagtcacaaatgtcct 10588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 27079532 - 27079714
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaa----------cactacaactataga 182  Q
    ||||||| ||||||||||||||  || ||||||||||||||||| || ||||||||  |||||||||||||||||          ||||||||     ||    
T  27079532 cataaatctcagcccattaaccaataacccaacataattgtttcatatacccccaagtgaaaccaaacgaaacaaaatgaaacaacactacaatcgcgga 27079631  T
Q  183 aatcatcattttagttcaatgataatttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    |||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||| |||| |||||    
T  27079632 aatcatcattttagttcaattatgatttcagagtgttaatttgtttcaatgacagtcacaaatgtccttattctagtttgttt 27079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 18612397 - 18612302
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacg 161  Q
    |||||||||||||||| |||||||  ||||||||  || |||||||||  |||||||||||||||||||||||||||||||||| |||||||||||    
T  18612397 tgcataaggaaatccttatgcaccgtacataaatcccaacccattaacttgtagcccaacataattgtttcctacacccccaaaggaaaccaaacg 18612302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 29163752 - 29163652
Alignment:
Q  66 tgcataaggaaatcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccccaaacgaaaccaaacgaaac 165  Q
    ||||||||||||| || |||||||   ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||| ||||    
T  29163752 tgcataaggaaattcttatgcaccgtgcataaatttcagcccattaaccggtag-ccaacataattgcttcctatacccccaaaggaaaccaaacaaaac 29163654  T
Q  166 aa 167  Q
    ||    
T  29163653 aa 29163652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 18612070 - 18612013
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  18612070 tttcagagtgttgatttggttcaatgataatcacaaatgtccttattatagtatgttt 18612013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 29163435 - 29163378
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttattatagtatgttt 265  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29163435 tttcacagtgttgatttggttcaatgaaagtcacaaatgtccttattatagtatgttt 29163378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 18756294 - 18756339
Alignment:
Q  208 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18756294 tttcagagtgttgatttggttcaatgacagtcacaaatgtccttat 18756339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 16967581 - 16967625
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  16967581 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 16967625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 18611975 - 18611931
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  18611975 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 18611931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 25119156 - 25119200
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  25119156 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 25119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 30909401 - 30909357
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  30909401 tggtttctgtgagttgtactccaaaaccattagatgtacttaatg 30909357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 27079755 - 27079796
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  27079755 tttctgtgagttgtactccaaaaccattagatgtacttaatg 27079796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 7765215 - 7765171
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  7765215 tggtttctgtgagttgtactccaaaaccattaggtgtacttaatg 7765171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 32557179 - 32557127
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||    
T  32557179 cataaatctcagtccattaaccggtagcccaacataattgcttcgtacacccc 32557127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 22857538 - 22857584
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatgat 311  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  22857538 tggtttttgtgagttgtacttcaaaaccattagatgtacttaatgat 22857584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 11140306 - 11140350
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||    
T  11140306 tggtttccgtgagttgtactccaaaaccattatatgtacttaatg 11140350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 15008095 - 15008139
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||    
T  15008095 tggtttctgtgagctgtactccaaaaccattggatgtacttaatg 15008139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 21384839 - 21384883
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||    
T  21384839 tggtttctgtgagttgtattccaaaaccattagatttacttaatg 21384883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 22031760 - 22031804
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||    
T  22031760 tggtttctgtgagttggactccaaaaccattaaatgtacttaatg 22031804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 4102600 - 4102630
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  4102600 tggtttctgtgagttgtactccaaaaccatt 4102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 7371064 - 7371094
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  7371064 tggtttctgtgagttgtactccaaaaccatt 7371094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 14237830 - 14237872
Alignment:
Q  267 gtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||    
T  14237830 gtttatgtgagttgtactccaaaatcattagatgtacttaatg 14237872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 21384955 - 21384985
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  21384955 tggtttctgtgagttgtactccaaaaccatt 21384985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 22857643 - 22857673
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  22857643 tggtttctgtgagttgtactccaaaaccatt 22857673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Original strand, 30387166 - 30387196
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  30387166 tggtttctgtgagttgtactccaaaaccatt 30387196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 295
Target Start/End: Complemental strand, 30909268 - 30909238
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccatt 295  Q
    |||||||||||||||||||||||||||||||    
T  30909268 tggtttctgtgagttgtactccaaaaccatt 30909238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 1449673 - 1449644
Alignment:
Q  120 cccaacataattgtttcctacacccccaaa 149  Q
    ||||||||||||||||||||||||||||||    
T  1449673 cccaacataattgtttcctacacccccaaa 1449644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 4338241 - 4338282
Alignment:
Q  268 tttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||| ||||||||||||||||||||||| ||| ||||||||    
T  4338241 tttctatgagttgtactccaaaaccattaaatgtacttaatg 4338282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 19281344 - 19281377
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  19281344 agttgtactccaaaaccattagatgtacttaatg 19281377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 4102466 - 4102510
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||  ||||||||||||||||| |||| ||||||||    
T  4102466 tggtttctgtgaactgtactccaaaaccattggatgtacttaatg 4102510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 10698627 - 10698670
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  10698627 tggtttctgtgagttgcactccaaaa-cattagatgtacttaatg 10698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 18611799 - 18611771
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  18611799 tggtttctgtgagttgtactccaaaacca 18611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 20522719 - 20522763
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||    
T  20522719 tggtttctttgagttgtactccagaaccattagatgtatttaatg 20522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 24736614 - 24736654
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaac 160  Q
    ||||||||||||| |||||||||||||||| |||| |||||    
T  24736614 cccaacataattgcttcctacacccccaaaggaaatcaaac 24736654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 293
Target Start/End: Complemental strand, 29157805 - 29157777
Alignment:
Q  265 tggtttctgtgagttgtactccaaaacca 293  Q
    |||||||||||||||||||||||||||||    
T  29157805 tggtttctgtgagttgtactccaaaacca 29157777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 6514 - 6466
Alignment:
Q  120 cccaacataattgtttcctacacccccaaacgaaaccaaacgaaacaac 168  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  6514 cccaacataattgcttcctacacccccaaaggaaaccaaacaaaacaac 6466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Complemental strand, 6174 - 6141
Alignment:
Q  276 agttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||| ||||||||    
T  6174 agttgtactccaaaaccattagatgtacttaatg 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 9560 - 9604
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  9560 tggtttctgtgagttatactccaaaaccattagatgtacttaatg 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 23594 - 23638
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||    
T  23594 tggtttccgtgagttgtactccaaaaccattagatgtacttaatg 23638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 19970 - 20014
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  19970 tggtttctgtgagttgtactcaaaaaccattagatgtacttaatg 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 1242 - 1198
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||    
T  1242 tggtttctgtgagttgtactccaaaatcattagatgtatttaatg 1198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 2328 - 2288
Alignment:
Q  105 cccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  2328 cccattaaccggtagcccaacataattgcttcgtacacccc 2288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 15626 - 15670
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  15626 tggtttctgtgagttgtacttcaaaaccattaaatgtacttaatg 15670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 33811 - 33767
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||| | ||||||||||||||||||||||| | ||||||    
T  33811 tggtttctgtcatttgtactccaaaaccattagatgtatttaatg 33767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 35783 - 35851
Alignment:
Q  77 atcctaatgcacctcacataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    ||||| ||||||||  ||||||| ||||| ||||||| |||||||||||||||||| ||| | ||||||    
T  35783 atccttatgcaccttgcataaatctcagctcattaactggtagcccaacataattgcttcgttcacccc 35851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 80717 - 80761
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||    
T  80717 tggtttctgtgagttgtaccccaaaactattagatgtacttaatg 80761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 3148 - 3113
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatg 300  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3148 tggtttctgtgagttgtactccaaaactattagatg 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 72689 - 72652
Alignment:
Q  272 tgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  72689 tgtgagttgtactccaaaaccattagacgtacttaatg 72652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 119922 - 119870
Alignment:
Q  93 cataaatttcagcccattaaccggtagcccaacataattgtttcctacacccc 145  Q
    |||||||  |||||||||||| |||||||||||||||||| ||  ||||||||    
T  119922 cataaatcccagcccattaactggtagcccaacataattgctttgtacacccc 119870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 96193 - 96149
Alignment:
Q  265 tggtttctgtgagttgtactccaaaaccattagatgcacttaatg 309  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||||    
T  96193 tggtttctgtgagttgtatttcaaaatcattagatgtacttaatg 96149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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