View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21656_low_44 (Length: 289)
Name: NF21656_low_44
Description: NF21656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21656_low_44 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 60 - 262
Target Start/End: Original strand, 35235448 - 35235650
Alignment:
| Q |
60 |
ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35235448 |
ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctacggaaagctttgttgaaaagcattcttgtttgaaacttagaaacaaatagg |
35235547 |
T |
 |
| Q |
160 |
aacaatgccaagaaagctacaggcgcgaagagatgcaagcccattattgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatat |
259 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | | ||||| |
|
|
| T |
35235548 |
aacaataccaagaaagctacaggcgcgaagagatgcaagcccattattgtcacaaataatgctttgatgtctttctcattgttattccttatatatatat |
35235647 |
T |
 |
| Q |
260 |
ata |
262 |
Q |
| |
|
||| |
|
|
| T |
35235648 |
ata |
35235650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 29287073 - 29287177
Alignment:
| Q |
60 |
ggcgcgatcccttctctatccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg |
159 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29287073 |
ggcgcgatcccttctctaaccaccaatacgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaatagg |
29287172 |
T |
 |
| Q |
160 |
aacaa |
164 |
Q |
| |
|
||||| |
|
|
| T |
29287173 |
aacaa |
29287177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25878840 - 25878898
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25878840 |
acaagtggaggcaagtggggtcgcttgaccccattgctcccacattgtatccgtgcctg |
25878898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30936759 - 30936700
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctgg |
60 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
30936759 |
acaagtggaggcaagtggggtcggttgactccattgcccccacattggatccgtgtctgg |
30936700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 29287174 - 29287239
Alignment:
| Q |
211 |
acaaataatgctttcatgtcttcctcattgttattcctt--gtgtgtatatatagatagaggttac |
274 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||| |||||| | |||||||||||||||| |
|
|
| T |
29287174 |
acaaatattgctttgatgtcttcctcattgttattccttgcgtgtgtgtgtatagatagaggttac |
29287239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33372343 - 33372305
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccac |
43 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33372343 |
gtggaggcaagtggggtcgcttgaccccattgcccccac |
33372305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 29284917 - 29284998
Alignment:
| Q |
124 |
aaaagcattcttgtttgaaacttagaaacaaataggaacaatgccaagaaagctacaggcgcgaagagatgcaagcccattatt |
207 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||||| ||||||||||||| || || | ||||||| ||||||| |||||| |
|
|
| T |
29284917 |
aaaagcattcttgtttgaaactca--aacaaatcggaaccatgccaagaaagcaactggtgtgaagagaagcaagcctattatt |
29284998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 28007618 - 28007672
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
28007618 |
gtggaggcaagtggggtggcttgactccattgcccccacactagatccgtgcctg |
28007672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 25999925 - 26000044
Alignment:
| Q |
88 |
cgagaaatttgtaaacctctaacgaaaacttggttgaaaagcattcttgtttgaaacttagaaacaaataggaacaatgccaagaaagctacaggcgcga |
187 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||| || | || |
|
|
| T |
25999925 |
cgagaaatttgtaaacctctactgaaagcttggttgaaaagcattcttgtttgaaactctgaaacaaatggaaaccatgccaagaaagctactggtgtga |
26000024 |
T |
 |
| Q |
188 |
agagatgcaagcccattatt |
207 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
26000025 |
agagtagcaagcccattatt |
26000044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30870187 - 30870129
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30870187 |
acaagtgaaggcaagtggggtcacttgaccccattgcccccacattgtatccgtgcctg |
30870129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 34214515 - 34214572
Alignment:
| Q |
2 |
caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| || |||||| |||| |
|
|
| T |
34214515 |
caagtggaggcaagtggggtcggttgaccccattgcccccacactgcatccgtccctg |
34214572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 8907860 - 8907826
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgccc |
39 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
8907860 |
gtggaggcaagtggggtcgcttgaccccattgccc |
8907826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 21712895 - 21712840
Alignment:
| Q |
205 |
attgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata |
260 |
Q |
| |
|
|||||||||||||||| || ||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
21712895 |
attgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata |
21712840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 29454522 - 29454557
Alignment:
| Q |
9 |
aggcaagtggggtcgcttgaccccattgcccccaca |
44 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |
|
|
| T |
29454522 |
aggcaagtggggtcgcttgaccccattgctcccaca |
29454557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15075333 - 15075275
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15075333 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
15075275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 2751522 - 2751468
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2751522 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccatgcctg |
2751468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4975644 - 4975702
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4975644 |
acaagtggatacaagtggggtcgcttgaccccattgcccccatattgtatccgtgcctg |
4975702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 20990976 - 20991030
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
20990976 |
gtggaggcaagtggggtcgcttgaccccgttgcccccacactagatccgtgcctg |
20991030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 5478799 - 5478853
Alignment:
| Q |
206 |
ttgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata |
260 |
Q |
| |
|
||||||||||||||| || ||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
5478799 |
ttgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata |
5478853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 25689084 - 25689048
Alignment:
| Q |
4 |
agtggaggcaagtggggtcgcttgaccccattgcccc |
40 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
25689084 |
agtggaggcaagtggggtcggttgactccattgcccc |
25689048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 38758599 - 38758547
Alignment:
| Q |
3 |
aagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtg |
55 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||| | ||||||||| ||||||| |
|
|
| T |
38758599 |
aagtggaggcaaatggagtcggttgaccccattactcccacattggatccgtg |
38758547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22604508 - 22604566
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22604508 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtattcgtgcctg |
22604566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 50093690 - 50093729
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccaca |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50093690 |
gtggaggcaagtggggtcgcttgaccccattgcccccaca |
50093729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 54378432 - 54378471
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccaca |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
54378432 |
gtggaggcaagtggggtcgcttgaccccattgtccccaca |
54378471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11559890 - 11559944
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
11559890 |
gtggaggtaagtggggtcgcttgacccgattgcccacacactagatccgtgcctg |
11559944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11569159 - 11569213
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
11569159 |
gtggaggtaagtggggtcgcttgacccgattgcccacacactagatccgtgcctg |
11569213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 22433647 - 22433592
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctgg |
60 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22433647 |
gtggaggcaagtggggtcgcttgaccccattgcccccacatggtatccgtgcctgg |
22433592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 9591587 - 9591530
Alignment:
| Q |
2 |
caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| | ||||| |||||| |
|
|
| T |
9591587 |
caagtggaggcaagtggggttggttgaccccattgcccccacactctatccatgcctg |
9591530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 46449866 - 46449920
Alignment:
| Q |
206 |
ttgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata |
260 |
Q |
| |
|
||||||||||||||| || ||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
46449866 |
ttgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata |
46449920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 8569176 - 8569229
Alignment:
| Q |
207 |
tgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata |
260 |
Q |
| |
|
|||||||||||||| || ||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
8569176 |
tgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata |
8569229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41249533 - 41249477
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctggg |
61 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
41249533 |
gtggaggcaagtggggtcacttgaccccattgtccccacattagatccgtgcctggg |
41249477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7032952 - 7032995
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccaca |
44 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7032952 |
acaagtggaggcaagtggggtcggttgaccccattgcccccaca |
7032995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 29069529 - 29069568
Alignment:
| Q |
5 |
gtggaggcaagtggggtcgcttgaccccattgcccccaca |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29069529 |
gtggaggcaagtggggtcgcttgaccccattgcccccaca |
29069568 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26708375 - 26708317
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||| |
|
|
| T |
26708375 |
acaagaggaggcaagtggggtcacttgaccccattgccctcacattgattccgtgcctg |
26708317 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26978109 - 26978051
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||| |
|
|
| T |
26978109 |
acaagaggaggcaagtggggtcacttgaccccattgccctcacattgattccgtgcctg |
26978051 |
T |
 |
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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25860227 - 25860278
Alignment:
| Q |
1 |
acaagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatcc |
52 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||||||||||||| ||| |||| |
|
|
| T |
25860227 |
acaagtggagggaagtggagtcggttgaccccattgcccccactttggatcc |
25860278 |
T |
 |
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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 39897154 - 39897209
Alignment:
| Q |
205 |
attgtcacaaataatgctttcatgtcttcctcattgttattccttgtgtgtatata |
260 |
Q |
| |
|
|||||||||||||||| || ||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
39897154 |
attgtcacaaataatggcttgatgcctttctcattgttattccttgtgtatatata |
39897209 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 42594573 - 42594627
Alignment:
| Q |
2 |
caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgc |
56 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||| ||| |||| |
|
|
| T |
42594573 |
caagtggaggcaagtggggtcggttgaccccattgccaccacattggatctgtgc |
42594627 |
T |
 |
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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 23429166 - 23429223
Alignment:
| Q |
2 |
caagtggaggcaagtggggtcgcttgaccccattgcccccacattgtatccgtgcctg |
59 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||| || |||||| |||| |
|
|
| T |
23429166 |
caagtggaggcaagtggggtcggttgaccccgttgcccccacactgcatccgtccctg |
23429223 |
T |
 |
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