View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21657_low_23 (Length: 274)
Name: NF21657_low_23
Description: NF21657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21657_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 48068662 - 48068902
Alignment:
| Q |
16 |
aatattgatatatttgatttgaaattttgaacccgatatgtactagtaccttgtgattgtttgactcttcaaaaaacaaacttcactatccttacctttg |
115 |
Q |
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| T |
48068662 |
aatattgatatatttgatttgaaattttaaacccgatatgtactagtaccttgtgattgtttgactcttcaaaaaacaaacttcactatccttacctttg |
48068761 |
T |
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| Q |
116 |
aatgaatttgaatattgaaaaacaaacaaataaataacagacagaagtaaccataatccaactatatataatattcaactgtattaggataagattggaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48068762 |
aatgaatttgaatattgaaaaacaaacaaataaataacagacagaagtaaccataatccaactatatataatattcaactgtattaggataagattggaa |
48068861 |
T |
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| Q |
216 |
ttacgaataaggttgttttgagtgtaaataaataccagtaa |
256 |
Q |
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| T |
48068862 |
ttacgaataaggttgttttgagtgtaaataaataccagtaa |
48068902 |
T |
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