View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21657_low_35 (Length: 225)
Name: NF21657_low_35
Description: NF21657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21657_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 43797455 - 43797655
Alignment:
| Q |
7 |
atacatgttgtctataaattagcaaaggaagaagtaaaaacgttaatgtcgcttgctgagaaagaatagagaggagggaattattattgttgtttgatat |
106 |
Q |
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| T |
43797455 |
atacatgttgtctataaattagcaaaggaagaagtaaaaacgttaatgtcgcttgctgagaaagaatagagaggagggaattattattgttgtttgatat |
43797554 |
T |
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| Q |
107 |
ccttacaaaaataggaacaacaagaaaggagaaggccagattcatcaaaataataaaggaaaaatataatgtcctttggcatgtatcaatattggaaacc |
206 |
Q |
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| T |
43797555 |
ccttacaaaaataggaacaacaagaaaggagaaggccagattcatcaaaataataaaggaaa-----aatgtcatttggcatgtatcaatattggaaacc |
43797649 |
T |
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| Q |
207 |
aactag |
212 |
Q |
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|||||| |
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| T |
43797650 |
aactag |
43797655 |
T |
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