View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21657_low_8 (Length: 572)

Name: NF21657_low_8
Description: NF21657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21657_low_8
NF21657_low_8
[»] chr5 (46 HSPs)
chr5 (77-297)||(33758953-33759174)
chr5 (401-511)||(14832705-14832815)
chr5 (424-511)||(15675424-15675511)
chr5 (429-511)||(15504060-15504142)
chr5 (402-511)||(30249076-30249185)
chr5 (429-510)||(36234477-36234558)
chr5 (403-511)||(35469014-35469122)
chr5 (424-511)||(2476476-2476563)
chr5 (424-509)||(43228560-43228645)
chr5 (428-509)||(32953589-32953670)
chr5 (424-504)||(1672404-1672484)
chr5 (425-509)||(16567904-16567988)
chr5 (401-481)||(33007027-33007107)
chr5 (488-562)||(15504030-15504104)
chr5 (430-511)||(6900878-6900959)
chr5 (424-509)||(7162001-7162086)
chr5 (430-511)||(34444077-34444158)
chr5 (488-560)||(6900850-6900922)
chr5 (424-510)||(12267300-12267385)
chr5 (424-510)||(13942670-13942755)
chr5 (401-481)||(34846487-34846567)
chr5 (488-547)||(14832771-14832830)
chr5 (483-554)||(30249054-30249125)
chr5 (488-554)||(2476454-2476520)
chr5 (488-554)||(34444055-34444121)
chr5 (488-554)||(35468992-35469058)
chr5 (430-506)||(767414-767490)
chr5 (422-490)||(21069153-21069221)
chr5 (77-151)||(33755670-33755744)
chr5 (504-560)||(39605797-39605853)
chr5 (488-547)||(15675409-15675468)
chr5 (77-193)||(33851136-33851248)
chr5 (488-530)||(16567904-16567946)
chr5 (500-554)||(33006996-33007050)
chr5 (424-481)||(37552055-37552112)
chr5 (424-481)||(37654885-37654942)
chr5 (483-530)||(7162039-7162086)
chr5 (488-530)||(32953628-32953670)
chr5 (500-554)||(34846456-34846510)
chr5 (509-562)||(21069123-21069176)
chr5 (479-531)||(36234506-36234558)
chr5 (483-558)||(17192581-17192655)
chr5 (488-526)||(1672447-1672485)
chr5 (488-525)||(767416-767453)
chr5 (500-560)||(8214590-8214651)
chr5 (428-481)||(37779784-37779837)
[»] chr2 (31 HSPs)
chr2 (397-531)||(41010604-41010738)
chr2 (401-511)||(29257478-29257588)
chr2 (425-511)||(304009-304095)
chr2 (425-511)||(41114787-41114873)
chr2 (425-510)||(17148909-17148994)
chr2 (425-504)||(18299060-18299139)
chr2 (436-525)||(25563070-25563159)
chr2 (488-562)||(304051-304125)
chr2 (436-511)||(6799814-6799889)
chr2 (428-511)||(13203879-13203962)
chr2 (488-554)||(6799845-6799911)
chr2 (488-554)||(41114829-41114895)
chr2 (424-481)||(2475948-2476005)
chr2 (499-560)||(12000640-12000701)
chr2 (500-560)||(17249435-17249495)
chr2 (488-547)||(29257463-29257522)
chr2 (488-554)||(18299102-18299168)
chr2 (427-511)||(12000668-12000753)
chr2 (431-511)||(15651352-15651433)
chr2 (401-490)||(17249463-17249552)
chr2 (424-481)||(22572638-22572695)
chr2 (488-554)||(13203857-13203923)
chr2 (499-560)||(15651324-15651385)
chr2 (500-560)||(34756828-34756888)
chr2 (488-532)||(41010624-41010668)
chr2 (430-490)||(45444376-45444436)
chr2 (488-531)||(17148909-17148952)
chr2 (422-481)||(33909261-33909320)
chr2 (500-562)||(45444404-45444466)
chr2 (499-560)||(35531901-35531962)
chr2 (500-552)||(2475919-2475971)
[»] chr8 (15 HSPs)
chr8 (401-511)||(36406383-36406493)
chr8 (424-531)||(34282777-34282884)
chr8 (428-523)||(13243230-13243325)
chr8 (401-504)||(28928178-28928281)
chr8 (424-506)||(27321779-27321861)
chr8 (428-511)||(3383940-3384023)
chr8 (425-497)||(35384283-35384355)
chr8 (488-547)||(36406449-36406508)
chr8 (488-554)||(3383979-3384045)
chr8 (488-554)||(28928149-28928215)
chr8 (425-481)||(38214867-38214923)
chr8 (403-486)||(24965148-24965231)
chr8 (490-562)||(39431591-39431663)
chr8 (488-562)||(34282820-34282898)
chr8 (471-511)||(39431593-39431633)
[»] chr7 (33 HSPs)
chr7 (401-519)||(21932636-21932754)
chr7 (428-510)||(4843432-4843514)
chr7 (397-531)||(28693893-28694027)
chr7 (424-506)||(5991337-5991419)
chr7 (430-511)||(23704392-23704473)
chr7 (403-510)||(19377523-19377631)
chr7 (424-509)||(22206603-22206688)
chr7 (424-509)||(22228051-22228136)
chr7 (425-483)||(26722877-26722935)
chr7 (425-511)||(35300346-35300432)
chr7 (414-480)||(42439469-42439535)
chr7 (403-476)||(41759523-41759596)
chr7 (422-502)||(7873135-7873215)
chr7 (478-554)||(23704419-23704495)
chr7 (488-554)||(35300388-35300454)
chr7 (401-480)||(814867-814946)
chr7 (500-562)||(3012424-3012486)
chr7 (427-501)||(21688270-21688344)
chr7 (401-490)||(3012454-3012543)
chr7 (488-560)||(21688231-21688304)
chr7 (500-564)||(38128932-38128996)
chr7 (488-531)||(4843432-4843475)
chr7 (488-523)||(7873180-7873215)
chr7 (488-530)||(22206646-22206688)
chr7 (488-530)||(22228051-22228093)
chr7 (500-554)||(26722910-26722964)
chr7 (423-481)||(30852451-30852509)
chr7 (429-510)||(38991099-38991180)
chr7 (488-562)||(28693963-28694041)
chr7 (488-531)||(19377523-19377567)
chr7 (427-486)||(38128901-38128960)
chr7 (488-525)||(5991380-5991417)
chr7 (503-560)||(41862300-41862357)
[»] chr6 (33 HSPs)
chr6 (397-511)||(9696167-9696281)
chr6 (402-511)||(2941334-2941443)
chr6 (401-509)||(10397703-10397811)
chr6 (430-511)||(23663682-23663763)
chr6 (402-511)||(34248908-34249017)
chr6 (427-504)||(15529065-15529142)
chr6 (422-505)||(2836082-2836165)
chr6 (425-511)||(15122155-15122241)
chr6 (428-510)||(34188911-34188993)
chr6 (394-481)||(1780930-1781017)
chr6 (425-504)||(9046833-9046912)
chr6 (425-504)||(14938840-14938919)
chr6 (488-554)||(9696145-9696211)
chr6 (397-511)||(31188202-31188316)
chr6 (428-509)||(28614325-28614406)
chr6 (397-511)||(31200046-31200161)
chr6 (488-554)||(2941312-2941378)
chr6 (488-562)||(2836127-2836201)
chr6 (488-554)||(15529036-15529102)
chr6 (488-560)||(31188272-31188344)
chr6 (488-547)||(15122140-15122199)
chr6 (488-539)||(23663719-23663770)
chr6 (488-531)||(34188911-34188954)
chr6 (487-554)||(34248972-34249039)
chr6 (431-501)||(2960794-2960864)
chr6 (488-554)||(9046875-9046941)
chr6 (425-481)||(339480-339536)
chr6 (488-560)||(31200117-31200189)
chr6 (479-522)||(2960794-2960837)
chr6 (488-527)||(14938882-14938921)
chr6 (500-554)||(1780994-1781048)
chr6 (488-530)||(28614364-28614406)
chr6 (488-530)||(10397769-10397811)
[»] chr4 (43 HSPs)
chr4 (401-531)||(43003078-43003208)
chr4 (401-510)||(52373867-52373976)
chr4 (424-511)||(10715768-10715855)
chr4 (424-511)||(10929538-10929625)
chr4 (401-511)||(4552297-4552407)
chr4 (401-511)||(32005995-32006105)
chr4 (424-504)||(4728677-4728757)
chr4 (424-511)||(2017354-2017441)
chr4 (425-511)||(2521816-2521902)
chr4 (425-511)||(40969336-40969422)
chr4 (401-511)||(46645715-46645825)
chr4 (425-506)||(50099987-50100068)
chr4 (401-511)||(2576284-2576394)
chr4 (401-481)||(10058658-10058738)
chr4 (488-554)||(10715746-10715812)
chr4 (488-554)||(10929516-10929582)
chr4 (488-560)||(2521858-2521930)
chr4 (425-481)||(31364256-31364312)
chr4 (488-554)||(4552275-4552341)
chr4 (424-509)||(9003669-9003754)
chr4 (423-480)||(41972358-41972415)
chr4 (422-510)||(49745168-49745257)
chr4 (483-554)||(4728648-4728719)
chr4 (488-554)||(2017397-2017463)
chr4 (488-554)||(40969314-40969380)
chr4 (500-557)||(25237696-25237753)
chr4 (428-511)||(1585781-1585864)
chr4 (488-547)||(32005980-32006039)
chr4 (500-554)||(10058627-10058681)
chr4 (500-554)||(31364225-31364279)
chr4 (488-525)||(50099989-50100026)
chr4 (401-510)||(50383987-50384095)
chr4 (488-532)||(43003144-43003188)
chr4 (488-523)||(52373875-52373910)
chr4 (427-481)||(11826968-11827022)
chr4 (436-490)||(25237721-25237775)
chr4 (488-554)||(46645693-46645759)
chr4 (488-532)||(1585781-1585825)
chr4 (425-481)||(14044466-14044522)
chr4 (489-552)||(2576264-2576327)
chr4 (479-530)||(9003669-9003720)
chr4 (401-446)||(12211091-12211136)
chr4 (401-481)||(32828285-32828365)
[»] scaffold0618 (2 HSPs)
scaffold0618 (401-511)||(1807-1917)
scaffold0618 (488-547)||(1792-1851)
[»] chr3 (29 HSPs)
chr3 (401-511)||(33178986-33179096)
chr3 (401-510)||(41218249-41218358)
chr3 (401-511)||(28311394-28311504)
chr3 (430-511)||(7501073-7501154)
chr3 (422-511)||(44047701-44047790)
chr3 (401-511)||(14461182-14461292)
chr3 (425-503)||(43700111-43700189)
chr3 (401-481)||(26370936-26371016)
chr3 (401-511)||(53652015-53652125)
chr3 (401-481)||(37516768-37516848)
chr3 (401-511)||(12909945-12910053)
chr3 (488-554)||(7501051-7501117)
chr3 (488-554)||(43700153-43700219)
chr3 (488-554)||(12909923-12909989)
chr3 (488-554)||(14461160-14461226)
chr3 (488-554)||(28311372-28311438)
chr3 (488-562)||(33179052-33179125)
chr3 (488-554)||(44047679-44047745)
chr3 (488-554)||(53651993-53652059)
chr3 (500-554)||(26370993-26371047)
chr3 (425-481)||(25391763-25391819)
chr3 (500-552)||(37516739-37516791)
chr3 (430-481)||(53987978-53988029)
chr3 (509-554)||(25391805-25391850)
chr3 (488-531)||(41218315-41218358)
chr3 (509-560)||(53068364-53068415)
chr3 (427-481)||(26278477-26278531)
chr3 (503-560)||(43447698-43447755)
chr3 (429-481)||(41358541-41358593)
[»] chr1 (40 HSPs)
chr1 (401-511)||(25007575-25007685)
chr1 (401-511)||(37153884-37153994)
chr1 (401-509)||(4774085-4774193)
chr1 (424-504)||(14727448-14727528)
chr1 (401-509)||(27460792-27460899)
chr1 (401-511)||(44305523-44305633)
chr1 (401-511)||(27583911-27584017)
chr1 (488-560)||(4641997-4642069)
chr1 (430-518)||(48940328-48940416)
chr1 (428-511)||(4641958-4642041)
chr1 (401-511)||(1428313-1428423)
chr1 (401-490)||(33468865-33468954)
chr1 (423-511)||(25011453-25011541)
chr1 (401-481)||(31844535-31844615)
chr1 (397-490)||(34459253-34459346)
chr1 (488-554)||(14727419-14727485)
chr1 (488-554)||(27583973-27584039)
chr1 (422-481)||(49898529-49898588)
chr1 (488-554)||(25007553-25007619)
chr1 (488-554)||(37153950-37154016)
chr1 (488-554)||(44305501-44305567)
chr1 (425-481)||(9527198-9527254)
chr1 (488-554)||(1428379-1428445)
chr1 (427-481)||(8239413-8239467)
chr1 (488-530)||(27460792-27460834)
chr1 (500-554)||(31844592-31844646)
chr1 (428-481)||(6331806-6331859)
chr1 (462-511)||(44238796-44238845)
chr1 (492-552)||(44238805-44238865)
chr1 (500-560)||(49898492-49898552)
chr1 (509-560)||(34459225-34459276)
chr1 (488-530)||(4774085-4774127)
chr1 (488-554)||(25011497-25011562)
chr1 (500-554)||(33468922-33468976)
chr1 (509-554)||(6331775-6331820)
chr1 (509-554)||(8239382-8239427)
chr1 (500-560)||(9527161-9527221)
chr1 (401-481)||(24646189-24646269)
chr1 (429-490)||(6802006-6802067)
chr1 (401-481)||(24745548-24745626)
[»] scaffold0075 (4 HSPs)
scaffold0075 (424-511)||(11635-11722)
scaffold0075 (424-511)||(7022-7108)
scaffold0075 (488-554)||(11613-11679)
scaffold0075 (488-554)||(7000-7066)
[»] scaffold0638 (1 HSPs)
scaffold0638 (424-481)||(4219-4276)
[»] scaffold0021 (1 HSPs)
scaffold0021 (500-562)||(112156-112218)


Alignment Details
Target: chr5 (Bit Score: 182; Significance: 4e-98; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 77 - 297
Target Start/End: Complemental strand, 33759174 - 33758953
Alignment:
Q  77 ggagatgaaattaaaccgggaagcacgtatggaattgctacgtaggcgtttaacgtgcatgttt-agtatccacatcttcataaagatgcataatgatgc 175  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  33759174 ggagatgaaattaaaccgagaagcacgtatggaattgctccgtaggcgtttaacgtgcatgttttaatatccacatattcataaagatgcataatgatgc 33759075  T
Q  176 atgtttccttttacttctgataaattgttggtaaataaaaatcccgtgaaaagtgactgagaatagagtcgattgtttggaattatttggaaaacaataa 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||    
T  33759074 atgtttccttttacttctgataaattgttggtaaataaaaatcccgtgaaaagtgattgagaatagagtcgattgtttggcatcatttgggaaacaataa 33758975  T
Q  276 agtcgattgttagtttgtacat 297  Q
    ||||||||||||||||||||||    
T  33758974 agtcgattgttagtttgtacat 33758953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 14832705 - 14832815
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||||||  || |||| || ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  14832705 cggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatt 14832804  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  14832805 tcctacggata 14832815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 15675511 - 15675424
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||||| ||||||    
T  15675511 ctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtagataatttcacatttccttcggata 15675424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 429 - 511
Target Start/End: Complemental strand, 15504142 - 15504060
Alignment:
Q  429 caaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  15504142 caaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctgcggata 15504060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 30249185 - 30249076
Alignment:
Q  402 ggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacattt 501  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||  ||||||| |||| ||||||||||  |||||||||||||||||||    
T  30249185 ggagccaggaattttacagagtctgggcaaaaaatttatcgcaaaacgttgctttcttcctgcaaataatttcacattttctgcagataatttcacattt 30249086  T
Q  502 cctgcggata 511  Q
    ||| ||||||    
T  30249085 cctacggata 30249076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 429 - 510
Target Start/End: Original strand, 36234477 - 36234558
Alignment:
Q  429 caaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36234477 caaaaaatttatcgcaaaatgttacttccttcttgcgaataatttcacatttcttgcagataatttcacatttcctgcggat 36234558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 35469122 - 35469014
Alignment:
Q  403 gagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttc 502  Q
    |||||| ||| |||| || | |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||||||||||||||||||     
T  35469122 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttt 35469023  T
Q  503 ctgcggata 511  Q
    || ||||||    
T  35469022 ctacggata 35469014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 2476563 - 2476476
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  2476563 ctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatttcctacggata 2476476  T

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Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 43228560 - 43228645
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||||||| | ||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  43228560 ctgggcaaaaaactaatcgcaaaatgttactcctttcctgcgaataatttcatatttcttgcagataatttcacatttcctgcgga 43228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 428 - 509
Target Start/End: Original strand, 32953589 - 32953670
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  32953589 gcaaaaaagttatcgcaaaatgttacttccttcctacgaataatttcacatttcctgcagataatttcacatttcctgcgga 32953670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 424 - 504
Target Start/End: Original strand, 1672404 - 1672484
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  1672404 ctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcacatttcct 1672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 16567988 - 16567904
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    ||||||||||| ||||||||||| |||||||| |||||| ||||| ||||||||||| ||| |||||||||||||||||||||||    
T  16567988 tgggcaaaaaaattatcgcaaaatgttacttccttcctgggaataatttcacatttcctgcggataatttcacatttcctgcgga 16567904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 33007107 - 33007027
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  33007107 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 33007027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 488 - 562
Target Start/End: Complemental strand, 15504104 - 15504030
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||||||    
T  15504104 ataatttcacatttcctgcagataatttcacatttcctgcggatatatctttcccgcggatcctaaaatcctatg 15504030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 430 - 511
Target Start/End: Complemental strand, 6900959 - 6900878
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||| |||||||| ||| |||||||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  6900959 aaaaaatttatcgcaaaatgttacttccttcatgcgaataatttcacatttcctgcggataatttcacatttcttgcggata 6900878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 7162001 - 7162086
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||||||| ||||||||||| |||||||| ||||||| |||| ||||||||||| ||  |||||||||||||||||||||||    
T  7162001 ctgggcaaaaaaattatcgcaaaatgttacttccttcctgcaaataatttcacatttcctgtggataatttcacatttcctgcgga 7162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 430 - 511
Target Start/End: Complemental strand, 34444158 - 34444077
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||| |||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  34444158 aaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatttcctacggata 34444077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 6900922 - 6900850
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||||||||||||||||||||||||| | |||||| |||||| | ||||||||||||||||||    
T  6900922 ataatttcacatttcctgcggataatttcacatttcttgcggatatatctttcccgcggatcctaaaatccta 6900850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 12267300 - 12267385
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||||||  ||| ||||| ||||||||||||||||||    
T  12267300 ctgggcaaaaagtttatcgcaaaacgttacttccttcctgtgaataatttcacattttctgcggataa-ttcacatttcctgcggat 12267385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 13942670 - 13942755
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||  ||||| ||||||||||||||||||    
T  13942670 ctgggtaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtggataa-ttcacatttcctgcggat 13942755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 34846567 - 34846487
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || | |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  34846567 cggagccaggaattttatagagcctggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 34846487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 547
Target Start/End: Original strand, 14832771 - 14832830
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  14832771 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcgga 14832830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 30249125 - 30249054
Alignment:
Q  483 tgcagataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  30249125 tgcaaataatttcacattttctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 30249054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 2476520 - 2476454
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  2476520 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 2476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 34444121 - 34444055
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  34444121 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 34444055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 35469058 - 35468992
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||||| ||||||    
T  35469058 ataatttcacatttcctgcagataatttcacattttctacggatatatctttcctgcggaacctaaa 35468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 506
Target Start/End: Complemental strand, 767490 - 767414
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgc 506  Q
    ||||||||||| ||||||||||||||  |||||||||||| |||| |||||  ||| ||||||||||||||||||||    
T  767490 aaaaaatttattgcaaaacgttactttcttcctgcgaataatttctcattttctgcggataatttcacatttcctgc 767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 21069221 - 21069153
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    ||||||||||||||||||||||||||||||| ||| ||||||  |||| ||||||||||| ||||||||    
T  21069221 gtctgggcaaaaaatttatcgcaaaacgttatttccttcctggaaataatttcacatttcctgcagata 21069153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 33755744 - 33755670
Alignment:
Q  77 ggagatgaaattaaaccgggaagcacgtatggaattgctacgtaggcgtttaacgtgcatgtttagtatccacat 151  Q
    ||||||||||  ||| ||||||||||||||  ||||||||||||||| ||||||||||||||||| | |||||||    
T  33755744 ggagatgaaaacaaatcgggaagcacgtatcaaattgctacgtaggcctttaacgtgcatgtttactctccacat 33755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 560
Target Start/End: Original strand, 39605797 - 39605853
Alignment:
Q  504 tgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||    
T  39605797 tgcggataattgcacatttcctgcggatatatctttcctgcggatcctaaaatccta 39605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 15675468 - 15675409
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| |||||| |||||||    
T  15675468 ataatttcacatttcctgtagataatttcacatttccttcggatatatctttcctgcgga 15675409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 33851248 - 33851136
Alignment:
Q  77 ggagatgaaattaaaccgggaagcacgtatggaattgctacgtaggcgtttaacgtgcatgtttagtatccacatcttcataaagatgcataatgatgca 176  Q
    ||||||||||  ||| ||||||||||||||  ||||||||||||||| |||||||||||||| || | |||||||  ||||    || ||||| ||||||    
T  33851248 ggagatgaaaacaaatcgggaagcacgtatcaaattgctacgtaggcctttaacgtgcatgtctactctccacataatcat----attcataaagatgca 33851153  T
Q  177 tgtttccttttacttct 193  Q
    ||||||| || ||||||    
T  33851152 tgtttccattgacttct 33851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 16567946 - 16567904
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  16567946 ataatttcacatttcctgcggataatttcacatttcctgcgga 16567904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 554
Target Start/End: Complemental strand, 33007050 - 33006996
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  33007050 ttcctgcgaataatttcacatttcctacggatatatctttcctgcggaacctaaa 33006996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 37552112 - 37552055
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||| |||| |||||| |||||||| |||||||||||| |||||||||||    
T  37552112 ctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttc 37552055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 37654942 - 37654885
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||| |||| |||||| |||||||| |||||||||||| |||||||||||    
T  37654942 ctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttc 37654885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 7162039 - 7162086
Alignment:
Q  483 tgcagataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  7162039 tgcaaataatttcacatttcctgtggataatttcacatttcctgcgga 7162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 32953628 - 32953670
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  32953628 ataatttcacatttcctgcagataatttcacatttcctgcgga 32953670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 554
Target Start/End: Complemental strand, 34846510 - 34846456
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| ||||||  |||||| ||||||    
T  34846510 ttcctgcgaataatttcacatttcctacggatatatctttcatgcggaacctaaa 34846456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 562
Target Start/End: Complemental strand, 21069176 - 21069123
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||| | |||| |||||| ||| ||||||||||||||||||    
T  21069176 ataatttcacatttcctgcagatatatctttcctgtggatcctaaaatcctatg 21069123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 36234506 - 36234558
Alignment:
Q  479 ttcttgcagataatttcacatttcctgcggataatttcacatttcctacggat 531  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||| |||||    
T  36234506 ttcttgcgaataatttcacatttcttgcagataatttcacatttcctgcggat 36234558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 558
Target Start/End: Original strand, 17192581 - 17192655
Alignment:
Q  483 tgcagataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcc 558  Q
    |||| ||||||||| ||||  ||| ||||||||||||||| || || ||| |||||| ||||||||||||||||||    
T  17192581 tgcaaataatttcatatttt-tgcagataatttcacattttctgcgaatatatctttcctgcggatcctaaaatcc 17192655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 1672447 - 1672485
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttccta 526  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  1672447 ataatttcacattttctgcagataatttcacatttccta 1672485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 525
Target Start/End: Complemental strand, 767453 - 767416
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcct 525  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  767453 ataatttctcattttctgcggataatttcacatttcct 767416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 560
Target Start/End: Original strand, 8214590 - 8214651
Alignment:
Q  500 ttcctgcggataatttcacatttc-ctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||| ||||||||| ||||  || |||||| |||||| ||||||||||||||||||||    
T  8214590 ttcctgcgaataatttcatatttgtctgcggatatatctttcctgcggatcctaaaatccta 8214651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 481
Target Start/End: Complemental strand, 37779837 - 37779784
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| |||||| |||| |||||||| |||| ||||||| |||||||||||    
T  37779837 gcaaaaaaattatcgtaaaatgttacttccttccagcgaataatttcacatttc 37779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 5e-39; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 397 - 531
Target Start/End: Complemental strand, 41010738 - 41010604
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttca 496  Q
    |||||||||| | ||| |||| || || ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||    
T  41010738 gtgacggagctaggaattttatagagtgtggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagaaaatttca 41010639  T
Q  497 catttcctgcggataatttcacatttcctacggat 531  Q
    |||||||| |||||||||||||||||||| |||||    
T  41010638 catttcctacggataatttcacatttcctgcggat 41010604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 29257588 - 29257478
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||| ||||||||    
T  29257588 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttcacatt 29257489  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  29257488 tcctacggata 29257478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 304009 - 304095
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  304009 tgggcaaaaaaattatcgcaaaacgttacttcttatctgcgaataatttcacatttcctgcagataatttcacatttcctgcggata 304095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 41114787 - 41114873
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  41114787 tgggcaaaaaatttatcgcaaaacgttacttccttcatgcgaataatttcacatttcctgcagataatttcacatttcctacggata 41114873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 425 - 510
Target Start/End: Complemental strand, 17148994 - 17148909
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  17148994 tgggcaaaaaatttatctcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataattccacatttcctgcggat 17148909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 18299060 - 18299139
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  18299060 tgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcct 18299139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 525
Target Start/End: Complemental strand, 25563159 - 25563070
Alignment:
Q  436 tttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggataatttcacatttcct 525  Q
    ||||||||||||||||||||| || |||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25563159 tttatcgcaaaacgttacttcctttctgcaaataatttcatatttcctgcagataatttcacatttcctggggataatttcacatttcct 25563070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 304051 - 304125
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  304051 ataatttcacatttcctgcagataatttcacatttcctgcggatatatctttcctgcggatcctaaaatcttatg 304125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 6799814 - 6799889
Alignment:
Q  436 tttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  6799814 tttatcacaaaacgttagttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctacggata 6799889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 13203962 - 13203879
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||||| |||||||| |||| ||||||| ||||||||||   ||||||||||||||||||||| ||||||    
T  13203962 gcaaaaaatttatcgcaaaatgttacttccttccagcgaataatttcacattttccgcagataatttcacatttcctacggata 13203879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 6799845 - 6799911
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  6799845 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 6799911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 41114829 - 41114895
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||| ||||||    
T  41114829 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcttgcggaacctaaa 41114895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 2476005 - 2475948
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  2476005 ctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttc 2475948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 560
Target Start/End: Complemental strand, 12000701 - 12000640
Alignment:
Q  499 tttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  12000701 tttccggcggataatttcacatttcctgcggatatatctttcctgcggatcctaaaatccta 12000640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 17249495 - 17249435
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  17249495 ttcctgcgaataatttcacatttcctgcggatatatctttaatgcggatcctaaaatccta 17249435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 29257522 - 29257463
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  29257522 ataatttcacatttcctgcagataagttcacatttcctacggatatatctttcctgcgga 29257463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 18299102 - 18299168
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| ||||||  |||||| ||||||    
T  18299102 ataatttcacatttcctgcagataatttcacatttcctacagatatatctttcttgcggaacctaaa 18299168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 511
Target Start/End: Complemental strand, 12000753 - 12000668
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcaca-tttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||| ||||||||||| ||||| || |||||||||||| ||| ||| ||||  || |||||||||||||||||||||||||    
T  12000753 ggcaaaaaaattatcgcaaaatgttacgtccttcctgcgaataattttacattttccggcggataatttcacatttcctgcggata 12000668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 511
Target Start/End: Complemental strand, 15651433 - 15651352
Alignment:
Q  431 aaaaatttatcgcaaaacgttacttctttcctgcgaatattttcaca-tttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||| ||||| || |||||||||||| ||| ||| |||| ||| ||||||||||||||||||| |||||    
T  15651433 aaaaatttatcgcaaaatgttacgtccttcctgcgaataattttacattttcctgcggataatttcacatttcctggggata 15651352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 490
Target Start/End: Complemental strand, 17249552 - 17249463
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    ||||| || ||| |||| || |||||||||||| |||||| ||||||||||||||  |||||||||||| ||||||||||| ||| ||||    
T  17249552 cggagtcaggaattttatagagtctgggcaaaatatttatagcaaaacgttactttcttcctgcgaataatttcacatttcctgcggata 17249463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 22572638 - 22572695
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  22572638 ctggacaaaaaatttatcgcaaaacgttactttcttcctgcgaataatttcacatttc 22572695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 13203923 - 13203857
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||| | || |||||||||||||||||||||||||  ||||| ||||||| ||||||    
T  13203923 ataatttcacattttccgcagataatttcacatttcctacggatatctctttcctgcggaacctaaa 13203857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 499 - 560
Target Start/End: Complemental strand, 15651385 - 15651324
Alignment:
Q  499 tttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||||||||||||||||  ||||| |||||| || | |||||||||||||||    
T  15651385 tttcctgcggataatttcacatttcctggggatatatctttcctactgatcctaaaatccta 15651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 34756888 - 34756828
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||||  ||||||||| |||||| | |||| ||||||||||||||||||||    
T  34756888 ttcctgcggataattgtacatttcctgcggatatacctttcctgcggatcctaaaatccta 34756828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 532
Target Start/End: Complemental strand, 41010668 - 41010624
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggata 532  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  41010668 ataatttcacatttcctgcagaaaatttcacatttcctacggata 41010624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 45444376 - 45444436
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    ||||||||||| ||||||| ||||||| |||||||||||| ||||||||||| || |||||    
T  45444376 aaaaaatttattgcaaaacattacttccttcctgcgaataatttcacatttcctgtagata 45444436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 17148952 - 17148909
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggat 531  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||    
T  17148952 ataatttcacatttcctgcagataattccacatttcctgcggat 17148909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 481
Target Start/End: Original strand, 33909261 - 33909320
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||||| |||||||||||| ||||| || ||| ||| |||| |||||||||||    
T  33909261 gtctgggcaaaaactttatcgcaaaatgttacatccttcatgcaaataatttcacatttc 33909320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 562
Target Start/End: Original strand, 45444404 - 45444466
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    |||||||| |||||||||||||||||   |||| ||||||  ||| |||||||||||||||||    
T  45444404 ttcctgcgaataatttcacatttcctgtagatatatctttcttgcagatcctaaaatcctatg 45444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 560
Target Start/End: Complemental strand, 35531962 - 35531901
Alignment:
Q  499 tttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||| ||| ||  ||||||||| |||||| | |||| ||||||||||||||||||||    
T  35531962 tttcctgcgaatatttgaacatttcctgcggatataactttcctgcggatcctaaaatccta 35531901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 552
Target Start/End: Complemental strand, 2475971 - 2475919
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatccta 552  Q
    |||||||| ||||||||||||||||| || ||| |||||| ||||||| ||||    
T  2475971 ttcctgcgaataatttcacatttcctgcgaatatatctttcctgcggaaccta 2475919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 36406383 - 36406493
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36406383 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttgcagataatttcacatt 36406482  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  36406483 tcctacggata 36406493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 34282777 - 34282884
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggataatttcacatttc 523  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  34282777 ctggacaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacatttcctgcaaataatttcacatttcatgcggataatttcacatttc 34282876  T
Q  524 ctacggat 531  Q
    || |||||    
T  34282877 ctgcggat 34282884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 428 - 523
Target Start/End: Complemental strand, 13243325 - 13243230
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggataatttcacatttc 523  Q
    ||||||||||||||| |||||||||||| |||| ||| |||| ||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  13243325 gcaaaaaatttatcgtaaaacgttacttttttcttgccaataatttcacattttgtggagataatttcacatttcctgcggataatttcacatttc 13243230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 401 - 504
Target Start/End: Complemental strand, 28928281 - 28928178
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||| ||||||||||||| |||| |||||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  28928281 cggagccaggaattttaaagagtctgggtaaaaaatttatcgtaaaaagttacttccttcctgcgaataatttcacattttctgcagataatttcacatt 28928182  T
Q  501 tcct 504  Q
    ||||    
T  28928181 tcct 28928178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 27321779 - 27321861
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgc 506  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  27321779 ctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcacatatcctgc 27321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 428 - 511
Target Start/End: Original strand, 3383940 - 3384023
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||| ||||||||||||||||||||| ||||| |||||| |||||| |||| ||||||||| |||||||||||| ||||||    
T  3383940 gcaaaaattttatcgcaaaacgttacttccttcctacgaataatttcacgtttcctgcagataaattcacatttcctacggata 3384023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 425 - 497
Target Start/End: Original strand, 35384283 - 35384355
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcac 497  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||||| | |||||||||||||    
T  35384283 tgggcaaaaaatttatcgcaaaacggtacttccttcctacgaataatttcacatttcctccagataatttcac 35384355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 547
Target Start/End: Original strand, 36406449 - 36406508
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||    
T  36406449 ataatttcacatttcttgcagataatttcacatttcctacggatatatctttcctgcgga 36406508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 3383979 - 3384045
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  3383979 ataatttcacgtttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 3384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 28928215 - 28928149
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||| |||| |||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  28928215 ataatttcacattttctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 28928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 38214923 - 38214867
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||    
T  38214923 tgggcaaaaaaattatcgcaaaatgttacttcattcctgcgaataatttcacatttc 38214867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 486
Target Start/End: Complemental strand, 24965231 - 24965148
Alignment:
Q  403 gagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgca 486  Q
    |||||| ||| |||| || | ||||||||||||||||||||||||| ||||||  || ||||||||| ||||||||||| ||||    
T  24965231 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaaccttactttctttctgcgaataatttcacatttcctgca 24965148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 39431591 - 39431663
Alignment:
Q  490 aatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||  |||||||||||||||| | |||||| ||||||  ||||| ||| |||||||||||    
T  39431591 aatttcacatttcctgtagataatttcacatttcatgcggatatatctttcttgcgggtccgaaaatcctatg 39431663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 34282820 - 34282898
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggata----catctttactgcggatcctaaaatcctatg 562  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||    ||  ||| ||||||||||||||||||||||    
T  34282820 ataatttcacatttcctgcaaataatttcacatttcatgcggataatttcacatttcctgcggatcctaaaatcctatg 34282898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 511
Target Start/End: Original strand, 39431593 - 39431633
Alignment:
Q  471 tttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  39431593 tttcacatttcctgtagataatttcacatttcatgcggata 39431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 401 - 519
Target Start/End: Original strand, 21932636 - 21932754
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||| || ||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| | |||    
T  21932636 cggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttctttcctgcgaataatttcatatttcctgcagataattttatatt 21932735  T
Q  501 tcctgcggataatttcaca 519  Q
    |||||||||||||||||||    
T  21932736 tcctgcggataatttcaca 21932754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 428 - 510
Target Start/End: Complemental strand, 4843514 - 4843432
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  4843514 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaataatttcacatttcctgcggataatttcacatttcctgcggat 4843432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 397 - 531
Target Start/End: Original strand, 28693893 - 28694027
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttca 496  Q
    |||||||||||| ||| |||| || | |||||||||||| |||||||||||| ||||||| || ||||||||| ||||||||||| | | ||||||||||    
T  28693893 gtgacggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggataatttca 28693992  T
Q  497 catttcctgcggataatttcacatttcctacggat 531  Q
    ||  ||||||||||||||||||||||||| |||||    
T  28693993 caaatcctgcggataatttcacatttcctgcggat 28694027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 506
Target Start/End: Original strand, 5991337 - 5991419
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgc 506  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  5991337 ctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataattttacatttcttgcggataatttcacatttcctgc 5991419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 23704392 - 23704473
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||| ||||||    
T  23704392 aaaaaatttatcgtaaaacgttacttctttcttgcgaataattttacatttcctgcagataatttcacatttcctacggata 23704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 403 - 510
Target Start/End: Complemental strand, 19377631 - 19377523
Alignment:
Q  403 gagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcaca-tttcttgcagataatttcacattt 501  Q
    |||||||||| | || || |||||||||||||| ||||||||||| ||||  ||||||||||||||| ||||||| |||| ||| |||||||||||||||    
T  19377631 gagccaagaattatatagagtctgggcaaaaaaattatcgcaaaatgttatgtctttcctgcgaataatttcacattttcctgcggataatttcacattt 19377532  T
Q  502 cctgcggat 510  Q
    |||||||||    
T  19377531 cctgcggat 19377523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 22206603 - 22206688
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||| ||| ||||||||||| |||||||| |||||||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  22206603 ctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctcacatttcctgcgga 22206688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 22228136 - 22228051
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||| ||| ||||||||||| |||||||| |||||||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  22228136 ctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatctcacatttcctgcgga 22228051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 26722877 - 26722935
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttctt 483  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  26722877 tgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttctt 26722935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 35300346 - 35300432
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||| ||||||||||||| ||||||||||||| ||| | |||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  35300346 tgggaaaaaaatttatcgtaaaacgttacttccttcttacgaataatttcacatttcctgcagataaattcacatttcctacggata 35300432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 414 - 480
Target Start/End: Original strand, 42439469 - 42439535
Alignment:
Q  414 tttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacattt 480  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  42439469 tttatagggtctgggcaaaaaatttatcgcaaaacgttacttcttttctacgaataatttcacattt 42439535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 41759523 - 41759596
Alignment:
Q  403 gagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcac 476  Q
    |||||||||| |||| || ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  41759523 gagccaagaattttatagagtctgggcaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcac 41759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 422 - 502
Target Start/End: Original strand, 7873135 - 7873215
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttc 502  Q
    |||||||||||||| ||||||||||| |||||||| |||| || |||| ||||||||||| ||| ||||||||||||||||    
T  7873135 gtctgggcaaaaaaattatcgcaaaatgttacttccttcccgctaataatttcacatttcctgcggataatttcacatttc 7873215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 478 - 554
Target Start/End: Original strand, 23704419 - 23704495
Alignment:
Q  478 tttcttgcagataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  23704419 tttcttgcgaataattttacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 23704495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 35300388 - 35300454
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  35300388 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 35300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 814867 - 814946
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacattt 480  Q
    |||||||| ||| | || || |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||    
T  814867 cggagccaggaattatatagagtctgggcaaaaaaattatcgcaaaacgttacttcattcctgctaataatttcacattt 814946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 562
Target Start/End: Complemental strand, 3012486 - 3012424
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    |||||| | ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  3012486 ttcctgtgaataatttcacatttcctgcggatatatctttcctgcggatcctaaaatcctatg 3012424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 427 - 501
Target Start/End: Complemental strand, 21688344 - 21688270
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacattt 501  Q
    ||||||||||||||| ||||| |||||| || | ||| ||||| ||||||||||| |||||||||||||||||||    
T  21688344 ggcaaaaaatttatcacaaaatgttactgctattctgtgaataatttcacatttcctgcagataatttcacattt 21688270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 490
Target Start/End: Complemental strand, 3012543 - 3012454
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    ||||||||  || |||| || |||||||||||||| |||| ||||||||||||||| |||||| ||||| ||||||||||| ||| ||||    
T  3012543 cggagccagaaattttatagagtctgggcaaaaaaattattgcaaaacgttacttccttcctgtgaataatttcacatttcctgcggata 3012454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 21688304 - 21688231
Alignment:
Q  488 ataatttcacatttcctgcggataatttcaca-tttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||||||||||||| |||||||||||| |||  |||||||| |||||| ||||||||| ||||||||||    
T  21688304 ataatttcacatttcctgcagataatttcacattttaatacggatatatctttcctgcggatcttaaaatccta 21688231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 564
Target Start/End: Original strand, 38128932 - 38128996
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatgat 564  Q
    ||||||| |||||||||||||||||| |  ||| |||||| ||||||||||||||||||||||||    
T  38128932 ttcctgcagataatttcacatttcctgcacatatatctttcctgcggatcctaaaatcctatgat 38128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 4843475 - 4843432
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggat 531  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4843475 ataatttcacatttcctgcggataatttcacatttcctgcggat 4843432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 7873180 - 7873215
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttc 523  Q
    ||||||||||||||||||||||||||||||||||||    
T  7873180 ataatttcacatttcctgcggataatttcacatttc 7873215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 22206646 - 22206688
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  22206646 ataatttcacatttcctgcggataatctcacatttcctgcgga 22206688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 22228093 - 22228051
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  22228093 ataatttcacatttcctgcggataatctcacatttcctgcgga 22228051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 26722910 - 26722964
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| ||||||||||||||| |||||||| |||||| ||||||| ||||||    
T  26722910 ttcctgcgaataatttcacatttcttacggatatatctttcctgcggaacctaaa 26722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 30852509 - 30852451
Alignment:
Q  423 tctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||| |||||| ||||||||||| ||| |||| |||||||||||| |||||||||||    
T  30852509 tctggggaaaaaaattatcgcaaaatgttgcttccttcctgcgaataatttcacatttc 30852451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 510
Target Start/End: Original strand, 38991099 - 38991180
Alignment:
Q  429 caaaaaatttatcgcaaaacgtta-cttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||||| |||||||||||||||| |||| |||||||||||| ||||| ||||| | |  |||||||||||||| ||||||||    
T  38991099 caaaaaagttatcgcaaaacgttatcttc-ttcctgcgaataatttcatatttcctacgaataatttcacattttctgcggat 38991180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 28693963 - 28694041
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggata----catctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||||    ||  ||| ||||||||||||||||||||||    
T  28693963 ataatttcacatttcctccggataatttcacaaatcctgcggataatttcacatttcctgcggatcctaaaatcctatg 28694041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 19377567 - 19377523
Alignment:
Q  488 ataatttcacattt-cctgcggataatttcacatttcctacggat 531  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  19377567 ataatttcacattttcctgcggataatttcacatttcctgcggat 19377523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 486
Target Start/End: Original strand, 38128901 - 38128960
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgca 486  Q
    |||||||| ||||||||||||||||| ||| |||||||  ||| ||||||||||| ||||    
T  38128901 ggcaaaaattttatcgcaaaacgttatttccttcctgcagataatttcacatttcctgca 38128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 525
Target Start/End: Original strand, 5991380 - 5991417
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcct 525  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  5991380 ataattttacatttcttgcggataatttcacatttcct 5991417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 41862300 - 41862357
Alignment:
Q  503 ctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||||||  ||||||||| |||||| | |||| ||| ||||||||||||||||    
T  41862300 ctgcggataattatacatttcctgcggatatacctttcctgtggatcctaaaatccta 41862357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 511
Target Start/End: Complemental strand, 9696281 - 9696167
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttca 496  Q
    |||| |||||||  || |||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  9696281 gtgatggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttca 9696182  T
Q  497 catttcctgcggata 511  Q
    |||||||| ||||||    
T  9696181 catttcctacggata 9696167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 2941443 - 2941334
Alignment:
Q  402 ggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacattt 501  Q
    ||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  2941443 ggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataatttcacattt 2941344  T
Q  502 cctgcggata 511  Q
    ||| ||||||    
T  2941343 cctacggata 2941334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 401 - 509
Target Start/End: Original strand, 10397703 - 10397811
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||| ||| ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||   ||||||||||||||||    
T  10397703 cggaaccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttccaacagataatttcacatt 10397802  T
Q  501 tcctgcgga 509  Q
    |||| ||||    
T  10397803 tcctacgga 10397811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 23663682 - 23663763
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  23663682 aaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacatttcctgcagataatttcacattttctacggata 23663763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 34248908 - 34249017
Alignment:
Q  402 ggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacattt 501  Q
    |||| |||||| |||| || | ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||| ||||    
T  34248908 ggagtcaagaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcggataatttcacatttcctgcagataatttcatattt 34249007  T
Q  502 cctgcggata 511  Q
     || ||||||    
T  34249008 tctacggata 34249017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 427 - 504
Target Start/End: Complemental strand, 15529142 - 15529065
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||    
T  15529142 ggcaaaaaatttatcgcaaaacattacttctttcctacgaataatttcacatttcctgcagataaattcacatttcct 15529065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 422 - 505
Target Start/End: Original strand, 2836082 - 2836165
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctg 505  Q
    ||||| |||||||||||||  ||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2836082 gtctgagcaaaaaatttattacaagacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctg 2836165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 425 - 511
Target Start/End: Complemental strand, 15122241 - 15122155
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||||||||||||||||  || ||||||||| ||||||||||  |||||||||||| ||||||||| ||||||    
T  15122241 tgggcaaaaaatttatcgcaaaacgttactttctttctgcgaataatttcacattttctgcagataattttacatttcctacggata 15122155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 510
Target Start/End: Complemental strand, 34188993 - 34188911
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggat 510  Q
    ||||||||||| |||||||||||||| ||| || |||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  34188993 gcaaaaaatttgtcgcaaaacgttacctctctcttgcgaataatttcacatttcctgcggataatttcacatttcctgcggat 34188911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 481
Target Start/End: Original strand, 1780930 - 1781017
Alignment:
Q  394 tcggtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||| | |||||| ||| |||| || ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  1780930 tcggtggcagagccaggaattttatagagtctgggcataaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 1781017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 9046833 - 9046912
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    |||||||||||||||||| ||||||||| ||| |||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  9046833 tgggcaaaaaatttatcggaaaacgttatttccttcctttgaataatttcacatttcctgcagataatttcacatttcct 9046912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 14938840 - 14938919
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    ||||||||||| ||||||||||| |||||||  |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  14938840 tgggcaaaaaaattatcgcaaaatgttactttcttcctgggaataatttcacatttcctgcagataatttcacatttcct 14938919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 9696211 - 9696145
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  9696211 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 9696145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 31188202 - 31188316
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttca 496  Q
    |||||||||||| ||| |||| || | |||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||  | | ||||||||||    
T  31188202 gtgacggagccatgaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgtgaataatttcacattttctacggataatttca 31188301  T
Q  497 catttcctgcggata 511  Q
     |||| ||| |||||    
T  31188302 aattttctgaggata 31188316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 428 - 509
Target Start/End: Original strand, 28614325 - 28614406
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||||||||  ||| |||||||||||||||||| ||||    
T  28614325 gcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgctgataatttcacatttcctacgga 28614406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 31200046 - 31200161
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgc-aaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttc 495  Q
    |||||||||||| ||| |||| || |  ||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||    | |||||||||    
T  31200046 gtgacggagccatgaattttatagagcatgggcaaaaaaattatcgctaaaacgttacttccttcctgcgaataatttcacattttccacggataatttc 31200145  T
Q  496 acatttcctgcggata 511  Q
    ||||||||||| ||||    
T  31200146 acatttcctgcagata 31200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 2941378 - 2941312
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||| ||||||    
T  2941378 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcatgcggaacctaaa 2941312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 2836127 - 2836201
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    ||||||||||||||||||| ||||||||||||||||||   |||| |  ||| ||||||||||||||||||||||    
T  2836127 ataatttcacatttcctgcagataatttcacatttcctgtcgatatacttttcctgcggatcctaaaatcctatg 2836201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 15529102 - 15529036
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| |||||| ||||||| ||||||    
T  15529102 ataatttcacatttcctgcagataaattcacatttcctacagatatatctttcctgcggaacctaaa 15529036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 31188272 - 31188344
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||| || |||||||||||| |||| ||  ||||| |||||| ||||||||||||||||||||    
T  31188272 ataatttcacattttctacggataatttcaaattttctgaggatatatctttcctgcggatcctaaaatccta 31188344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 15122199 - 15122140
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    |||||||||||||| |||| |||||||| |||||||||||||||| |||||| |||||||    
T  15122199 ataatttcacattttctgcagataattttacatttcctacggatatatctttcctgcgga 15122140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 539
Target Start/End: Original strand, 23663719 - 23663770
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatcttt 539  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  23663719 ataatttcacatttcctgcagataatttcacattttctacggatatatcttt 23663770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 531
Target Start/End: Complemental strand, 34188954 - 34188911
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggat 531  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  34188954 ataatttcacatttcctgcggataatttcacatttcctgcggat 34188911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Original strand, 34248972 - 34249039
Alignment:
Q  487 gataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||| |||||| ||| ||| ||||||    
T  34248972 gataatttcacatttcctgcagataatttcatattttctacggatatatctttcctgtggaacctaaa 34249039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 501
Target Start/End: Complemental strand, 2960864 - 2960794
Alignment:
Q  431 aaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacattt 501  Q
    ||||| |||| |||||| |||||||| ||| |||||||| ||||||||||| ||| |||||||||||||||    
T  2960864 aaaaaattattgcaaaatgttacttccttcttgcgaataatttcacatttcctgcggataatttcacattt 2960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 9046875 - 9046941
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| || |||  |||||| ||||||    
T  9046875 ataatttcacatttcctgcagataatttcacatttcctacagatatatatttcttgcggaacctaaa 9046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 339536 - 339480
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||||||||||||||| |||||||| ||||||| | || |||||||||||    
T  339536 tgggcaaaaaatttatcgcaaaatgttacttccttcctgcaattaatttcacatttc 339480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 31200117 - 31200189
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||| |  |||||||||||||||||||| | |||| |||||  |||||||| |||||||||||    
T  31200117 ataatttcacattttccacggataatttcacatttcctgcagatatatcttacctgcggattctaaaatccta 31200189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 522
Target Start/End: Complemental strand, 2960837 - 2960794
Alignment:
Q  479 ttcttgcagataatttcacatttcctgcggataatttcacattt 522  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  2960837 ttcttgcgaataatttcacatttcctgcggataatttcacattt 2960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 527
Target Start/End: Original strand, 14938882 - 14938921
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctac 527  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  14938882 ataatttcacatttcctgcagataatttcacatttcctac 14938921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 1780994 - 1781048
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| ||||||  |||||| ||||||    
T  1780994 ttcctgcgaataatttcacatttcctacggatatatcttttatgcggaacctaaa 1781048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 28614364 - 28614406
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  28614364 ataatttcacattttctgctgataatttcacatttcctacgga 28614406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 530
Target Start/End: Original strand, 10397769 - 10397811
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    ||||||||||||||||  | |||||||||||||||||||||||    
T  10397769 ataatttcacatttccaacagataatttcacatttcctacgga 10397811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 401 - 531
Target Start/End: Original strand, 43003078 - 43003208
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||||||  || |||| || |||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43003078 cggagccagaaattttatagagtctggacaaaaaatttattgcagaacgttacttctttcctgcgaataatttcacatttcctgcagataatttcacatt 43003177  T
Q  501 tcctgcggataatttcacatttcctacggat 531  Q
    |||| | |||||||| ||||||||| |||||    
T  43003178 tcctaccgataatttaacatttcctgcggat 43003208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 401 - 510
Target Start/End: Complemental strand, 52373976 - 52373867
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||    
T  52373976 cggagccaggaattttatagagtctgtgcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatttcacatt 52373877  T
Q  501 tcctgcggat 510  Q
    || |||||||    
T  52373876 tcatgcggat 52373867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 10715855 - 10715768
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  10715855 ctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctacggata 10715768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 10929625 - 10929538
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  10929625 ctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcctacggata 10929538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 4552407 - 4552297
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| ||||||||| ||||||||    
T  4552407 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacaaataatttcacatttcctgcagataaattcacatt 4552308  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  4552307 tcctacggata 4552297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 32006105 - 32005995
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||| || ||| |||| || ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||| |||| ||||||||    
T  32006105 cggagtcatgaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcaaataaattcacatt 32006006  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  32006005 tcctacggata 32005995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 424 - 504
Target Start/End: Complemental strand, 4728757 - 4728677
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||  ||||||||||||||||||||||    
T  4728757 ctgggcaaaaaatttatcgcaaaacgttacttccttcctgcaaataatttcacattttctgcagataatttcacatttcct 4728677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 424 - 511
Target Start/End: Original strand, 2017354 - 2017441
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| | ||||||| |||||||||||| ||||||    
T  2017354 ctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctacagataaattcacatttcctacggata 2017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 2521816 - 2521902
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||| |||||| |||||||| |||||||||    
T  2521816 tgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatatcacattttctgcggata 2521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 511
Target Start/End: Complemental strand, 40969422 - 40969336
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||  |||||||||||||||||||||| ||||||    
T  40969422 tgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcatattttctgcagataatttcacatttcctacggata 40969336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 46645825 - 46645715
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| || | ||||||||| |||    
T  46645825 cggagccaggaattttatagagtctgggaaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtatataatttcatatt 46645726  T
Q  501 tcctgcggata 511  Q
    | || ||||||    
T  46645725 ttctacggata 46645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 50100068 - 50099987
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgc 506  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||    
T  50100068 tgggtaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcggataatttcacatttcctgc 50099987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 2576394 - 2576284
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||||||| |||| |  |||||||||||||| |||||||||||||||||||| || |||||| || ||||| ||||  |||||||||||| |||||    
T  2576394 cggagccaagaattttataaagtctgggcaaaaaaattatcgcaaaacgttacttcctttctgcgattaatttcatattttctgcagataattttacatt 2576295  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  2576294 tcctacggata 2576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 10058738 - 10058658
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  10058738 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 10058658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 10715812 - 10715746
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  10715812 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 10715746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 10929582 - 10929516
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  10929582 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 10929516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 2521858 - 2521930
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||||||||||||||| |||||||| || ||||||  ||||| ||||||||||||||||||||    
T  2521858 ataatttcacatttcctgcggataatatcacattttctgcggatatgtctttcctgcggatcctaaaatccta 2521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 31364312 - 31364256
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  31364312 tgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 31364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 4552341 - 4552275
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  4552341 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 4552275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 9003754 - 9003669
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcgga 509  Q
    |||| ||||||| ||||||||||| |||||||| ||| |||||||| ||||||||||| |   |||||||||||||||||||||||    
T  9003754 ctggacaaaaaaattatcgcaaaatgttacttccttcttgcgaataatttcacatttcctatggataatttcacatttcctgcgga 9003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 41972358 - 41972415
Alignment:
Q  423 tctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacattt 480  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41972358 tctggtcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacattt 41972415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 422 - 510
Target Start/End: Complemental strand, 49745257 - 49745168
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttct-tgcagataatttcacatttcctgcggat 510  Q
    ||||||| ||||||||||||| |||| ||||| || |||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||    
T  49745257 gtctggggaaaaaatttatcgtaaaatgttacgtccttcctgcgaataattttacatttttctgcggataatttcacatttcctgcggat 49745168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 4728719 - 4728648
Alignment:
Q  483 tgcagataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||| |||||||||||||| |||| |||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  4728719 tgcaaataatttcacattttctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 4728648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 2017397 - 2017463
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  2017397 ataatttcacatttcctacagataaattcacatttcctacggatatatctttcctgcggaacctaaa 2017463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 40969380 - 40969314
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  40969380 ataatttcatattttctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 40969314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 25237753 - 25237696
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatc 557  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  25237753 ttcctgcgaataatttcacatttcctgcggatacatctttcctgcgaatcctaaaatc 25237696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 1585864 - 1585781
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||| ||||||||||||||| |||  ||| | |||||| ||||||||||| ||||||||| || ||||||||| ||||||    
T  1585864 gcaaaaaaattatcgcaaaacgttgctttcttcgtacgaataatttcacatttcctgcagataaatttacatttcctacggata 1585781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 32006039 - 32005980
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    |||||||||||||||||||  |||| ||||||||||||||||||| |||||| |||||||    
T  32006039 ataatttcacatttcctgcaaataaattcacatttcctacggatatatctttcctgcgga 32005980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 554
Target Start/End: Complemental strand, 10058681 - 10058627
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  10058681 ttcctgcgaataatttcacatttcctacggatatatctttcctgcggaacctaaa 10058627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 554
Target Start/End: Complemental strand, 31364279 - 31364225
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  31364279 ttcctgcgaataatttcacatttcctacggatatatcttttctgcggaacctaaa 31364225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 525
Target Start/End: Complemental strand, 50100026 - 50099989
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcct 525  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50100026 ataatttcacatttcctgcggataatttcacatttcct 50099989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 510
Target Start/End: Complemental strand, 50384095 - 50383987
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||||||| |||| || | ||||||||||||   || ||||||||||||||| |||||||||||| ||| | | ||| ||| ||| ||||||||||    
T  50384095 cggagccaagaattttatagagcctgggcaaaaaaaa-attgcaaaacgttacttccttcctgcgaataattttataattcctgcggattatttcacatt 50383997  T
Q  501 tcctgcggat 510  Q
    |||| |||||    
T  50383996 tcctacggat 50383987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 532
Target Start/End: Original strand, 43003144 - 43003188
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggata 532  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  43003144 ataatttcacatttcctgcagataatttcacatttcctaccgata 43003188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 52373910 - 52373875
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttc 523  Q
    ||||||||||||||||||||||||||||||||||||    
T  52373910 ataatttcacatttcctgcggataatttcacatttc 52373875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 481
Target Start/End: Original strand, 11826968 - 11827022
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||| |||||| |||| |||||||| |||||||||||| |||||||||||    
T  11826968 ggcaaaaaaattatcgtaaaatgttacttccttcctgcgaataatttcacatttc 11827022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 490
Target Start/End: Complemental strand, 25237775 - 25237721
Alignment:
Q  436 tttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||| ||| ||||    
T  25237775 tttatcacaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 25237721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 46645759 - 46645693
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||   ||||||||| |||| ||||||||| |||||| ||||||| ||||||    
T  46645759 ataatttcacatttcctgtatataatttcatattttctacggatatatctttcctgcggaacctaaa 46645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 532
Target Start/End: Complemental strand, 1585825 - 1585781
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggata 532  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||    
T  1585825 ataatttcacatttcctgcagataaatttacatttcctacggata 1585781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 14044522 - 14044466
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||| ||||||||||| ||||| || |||||| ||||| |||||||||||    
T  14044522 tgggcaaaaaaattatcgcaaaatgttacctccttcctgagaataatttcacatttc 14044466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 2576327 - 2576264
Alignment:
Q  489 taatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatccta 552  Q
    |||||||| |||| |||| |||||||| |||||||||||||||| || ||| ||||||| ||||    
T  2576327 taatttcatattttctgcagataattttacatttcctacggatatatatttcctgcggaaccta 2576264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 530
Target Start/End: Complemental strand, 9003720 - 9003669
Alignment:
Q  479 ttcttgcagataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    |||||||  |||||||||||||||||  ||||||||||||||||||| ||||    
T  9003720 ttcttgcgaataatttcacatttcctatggataatttcacatttcctgcgga 9003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 12211091 - 12211136
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaa 446  Q
    |||||||| ||| ||||||| || ||||||||||||||||||||||    
T  12211091 cggagccatgaattttacagagtttgggcaaaaaatttatcgcaaa 12211136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 32828365 - 32828285
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||  || |||| |||| |||||||||||| ||||| |||||  ||||||| ||||||| |||| ||| |||||||    
T  32828365 cggagccagaaattttatagggcctgggcaaaaaaattatcacaaaatattacttccttcctgcaaataattttacatttc 32828285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 1917 - 1807
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||| ||||||||    
T  1917 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagttcacatt 1818  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  1817 tcctacggata 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 1851 - 1792
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcgga 547  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  1851 ataatttcacatttcctgcagataagttcacatttcctacggatatatctttcctgcgga 1792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 33178986 - 33179096
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||| || ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  33178986 cggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacattttctgcagataatttcacatt 33179085  T
Q  501 tcctgcggata 511  Q
    | |||||||||    
T  33179086 ttctgcggata 33179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 401 - 510
Target Start/End: Original strand, 41218249 - 41218358
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||| || ||| |||| || |||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||    
T  41218249 cggagtcaggaattttatagagtctaggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataattttacatt 41218348  T
Q  501 tcctgcggat 510  Q
    ||||||||||    
T  41218349 tcctgcggat 41218358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 28311504 - 28311394
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||| ||||||||| ||||||||    
T  28311504 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctacgaataatttcacatttcctgcagataaattcacatt 28311405  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  28311404 tcctacggata 28311394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 430 - 511
Target Start/End: Complemental strand, 7501154 - 7501073
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  7501154 aaaaaatttatcgcaaaacgttacttacttcctgcgaataatttcacatttcctgcagataatttcacatttcctacggata 7501073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 44047790 - 44047701
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  44047790 gtctggacaaaaaatttatcgcaaaacgttacttctttcctacaaataatttcacatttcctgcagataaattcacatttcctacggata 44047701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 14461292 - 14461182
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | |||||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||| ||||||||| ||||||||    
T  14461292 cggagccaggaattttatagagcctgggcaaaaaatttatcacaaaacgttacttccttcctacgaataattttacatttcctgcagataaattcacatt 14461193  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  14461192 tcctacggata 14461182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 503
Target Start/End: Original strand, 43700111 - 43700189
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcc 503  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  43700111 tgggtaaaaaatatatcgcaaaacgttacttcttttctgcgaataatttcacatttcctgcagataatttcacatttcc 43700189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 26370936 - 26371016
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  26370936 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 26371016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 53652125 - 53652015
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || |||||| |||||||||||||||||||| |||| |  ||||| |||||| ||||||||||| ||||||||| ||||||||    
T  53652125 cggagccaggaattttatagagtctggacaaaaaatttatcgcaaaacattacgttcttcctacgaataatttcacatttcctgcagataaattcacatt 53652026  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  53652025 tcctacggata 53652015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 37516848 - 37516768
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  37516848 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttc 37516768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 12910053 - 12909945
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||| ||||||||| ||||  |||||| ||||||||||| || |||||| ||||||||    
T  12910053 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaatcgttacttccttcc--cgaataatttcacatttcctgtagataaattcacatt 12909956  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  12909955 tcctacggata 12909945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 7501117 - 7501051
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  7501117 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctgcggaacctaaa 7501051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 43700153 - 43700219
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||| ||||||    
T  43700153 ataatttcacatttcctgcagataatttcacatttccaacggatatatctttcctgcggaacctaaa 43700219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 12909989 - 12909923
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  12909989 ataatttcacatttcctgtagataaattcacatttcctacggatatatctttcctgcggaacctaaa 12909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 14461226 - 14461160
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  14461226 ataattttacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 14461160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 28311438 - 28311372
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| | ||||| ||||||    
T  28311438 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttccagcggaacctaaa 28311372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 562
Target Start/End: Original strand, 33179052 - 33179125
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    |||||||||||||| |||| ||||||||||||||| || |||||| |||||| |||| |||||||||||||||||    
T  33179052 ataatttcacattttctgcagataatttcacattttctgcggatatatctttcctgc-gatcctaaaatcctatg 33179125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 44047745 - 44047679
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||  |||||| ||||||    
T  44047745 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcttgcggaacctaaa 44047679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 53652059 - 53651993
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||| || ||||||    
T  53652059 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaa 53651993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 26370993 - 26371047
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  26370993 ttcctgcgaataatttcacatttcctacggatatatctttcctgcggaacctaaa 26371047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 481
Target Start/End: Original strand, 25391763 - 25391819
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||||||||||||||| ||||||| ||| | |||||| |||||||||||    
T  25391763 tgggcaaaaaatttatcgcaaaacattacttccttcttacgaataatttcacatttc 25391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 552
Target Start/End: Complemental strand, 37516791 - 37516739
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatccta 552  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||    
T  37516791 ttcctgcgaataatttcacatttcctacggatatatctttcctgcggaaccta 37516739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 481
Target Start/End: Complemental strand, 53988029 - 53987978
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||| |||||| |||||||| |||||||||||| |||||||||||    
T  53988029 aaaaaatttattgcaaaatgttacttccttcctgcgaataatttcacatttc 53987978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 554
Target Start/End: Original strand, 25391805 - 25391850
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  25391805 ataatttcacatttcctacggatatatctttcctgcggaacctaaa 25391850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 41218315 - 41218358
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggat 531  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||    
T  41218315 ataatttcacatttcctgcagataattttacatttcctgcggat 41218358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 509 - 560
Target Start/End: Complemental strand, 53068415 - 53068364
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||| || |||||| || ||||||||| ||||||||||||||    
T  53068415 ataatttcacattttctgcggatatatttttactgcgaatcctaaaatccta 53068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 481
Target Start/End: Complemental strand, 26278531 - 26278477
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||| ||||||||||| | |||||| ||| |||||||| |||||||||||    
T  26278531 ggcaaaaaaattatcgcaaaatgatacttccttcttgcgaataatttcacatttc 26278477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 43447755 - 43447698
Alignment:
Q  503 ctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||||||| |||||| ||  ||||| ||||||  |||||||||||||||||||    
T  43447755 ctgcggataattttacattttctgtggatatatcttttatgcggatcctaaaatccta 43447698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 481
Target Start/End: Original strand, 41358541 - 41358593
Alignment:
Q  429 caaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||| |||||||||||||||| ||| |||||||| ||| || ||||||||    
T  41358541 caaaaaaattatcgcaaaacgttatttccttcctgcggataattgcacatttc 41358593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 25007685 - 25007575
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| ||||||||    
T  25007685 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatt 25007586  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  25007585 tcctacggata 25007575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 37153884 - 37153994
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| ||||||||    
T  37153884 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatt 37153983  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  37153984 tcctacggata 37153994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 401 - 509
Target Start/End: Complemental strand, 4774193 - 4774085
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    ||||||||  || |||| || |||||||||||||| ||||||||||| |||||||  |||||||||||| ||||||||||||||| ||||||||||||||    
T  4774193 cggagccagaaattttatagagtctgggcaaaaaaattatcgcaaaatgttactttcttcctgcgaataatttcacatttcttgcggataatttcacatt 4774094  T
Q  501 tcctgcgga 509  Q
    |||||||||    
T  4774093 tcctgcgga 4774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 424 - 504
Target Start/End: Complemental strand, 14727528 - 14727448
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcct 504  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  14727528 ctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttcct 14727448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 401 - 509
Target Start/End: Complemental strand, 27460899 - 27460792
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||||||| |||| || | ||||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  27460899 cggagccaagaattttatagagcctggg-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttcacatt 27460801  T
Q  501 tcctgcgga 509  Q
    |||| ||||    
T  27460800 tcctacgga 27460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 44305633 - 44305523
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | |||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| ||||||||    
T  44305633 cggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatt 44305534  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  44305533 tcctacggata 44305523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 27583911 - 27584017
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | ||| |||||||||||||||||||||||||||||    ||||||||| ||||||||||| ||||||||||||||||||    
T  27583911 cggagccaggaattttatagagcctgagcaaaaaatttatcgcaaaacgttacttc----ctgcgaataatttcacatttcctgcagataatttcacatt 27584006  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  27584007 tcctacggata 27584017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 4641997 - 4642069
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  4641997 ataatttcacatttcctgcggataatttcatatttcctgcggatatatctttcctgcggatcctaaaatccta 4642069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 430 - 518
Target Start/End: Original strand, 48940328 - 48940416
Alignment:
Q  430 aaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggataatttcac 518  Q
    |||||| |||| ||||||| ||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  48940328 aaaaaaattattgcaaaactttatttctttactgcgaataatttcacattttttgcagataatttcacatttcctgcagataatttcac 48940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 428 - 511
Target Start/End: Original strand, 4641958 - 4642041
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||  |||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  4641958 gcaaaaaatcaatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggataatttcatatttcctgcggata 4642041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 401 - 511
Target Start/End: Original strand, 1428313 - 1428423
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatt 500  Q
    |||||||| ||| |||| || | |||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||  ||||||||  ||||||||    
T  1428313 cggagccaggaattttatagagcctgggcaaaaaatttaccgcaaaacgttacttccttcctacgaataatttcacattttctgcagatagattcacatt 1428412  T
Q  501 tcctgcggata 511  Q
    |||| ||||||    
T  1428413 tcctacggata 1428423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 401 - 490
Target Start/End: Original strand, 33468865 - 33468954
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    |||||||| ||| |||| || | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||    
T  33468865 cggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacagata 33468954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 423 - 511
Target Start/End: Original strand, 25011453 - 25011541
Alignment:
Q  423 tctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||| |||  |||||  |||||||||||||||||||||| ||||||    
T  25011453 tctgggcaaaaaaattatcgcaaaacgttacttccttcatgcgaataattttgcattttctgcagataatttcacatttcctacggata 25011541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 401 - 481
Target Start/End: Original strand, 31844535 - 31844615
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||    
T  31844535 cggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttc 31844615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 490
Target Start/End: Complemental strand, 34459346 - 34459253
Alignment:
Q  397 gtgacggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    |||||||||||| ||| |||| || |||||||||||||||||||| |||||||||||||| ||||  |||||| ||||||||||| | ||||||    
T  34459346 gtgacggagccaggaattttatagagtctgggcaaaaaatttatcacaaaacgttacttccttcccacgaataatttcacatttcctacagata 34459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 14727485 - 14727419
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  14727485 ataatttcacatttcctgcagataatttcacatttcctacagatatatctttcctgcggaacctaaa 14727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 27583973 - 27584039
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||| ||||||    
T  27583973 ataatttcacatttcctgcagataatttcacatttcctacggatatatctttcctggggaacctaaa 27584039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 481
Target Start/End: Complemental strand, 49898588 - 49898529
Alignment:
Q  422 gtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||    
T  49898588 gtctgggcaaaaaatttatcgcaaaatgttacgtccttcctgcgaataatttcacatttc 49898529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 25007619 - 25007553
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||| || ||||||    
T  25007619 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcagaacctaaa 25007553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 37153950 - 37154016
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||| ||| ||||||    
T  37153950 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaa 37154016  T

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Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 44305567 - 44305501
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||| ||| ||||||    
T  44305567 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgtggaacctaaa 44305501  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 9527254 - 9527198
Alignment:
Q  425 tgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||||||||||||||||||||||   |||||||||||| |||||||||||    
T  9527254 tgggcaaaaaatttatcgcaaaacgttactgtcttcctgcgaataatttcacatttc 9527198  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 1428379 - 1428445
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| |||||| ||||||| ||||||    
T  1428379 ataatttcacattttctgcagatagattcacatttcctacggatatatctttcctgcggaacctaaa 1428445  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 427 - 481
Target Start/End: Complemental strand, 8239467 - 8239413
Alignment:
Q  427 ggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||||||||||||||||||||| |||||  ||||| |||||||||||    
T  8239467 ggcaaaaaatttatcgcaaaacgttacttccttcctatgaataatttcacatttc 8239413  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 27460834 - 27460792
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27460834 ataatttcacatttcctgcagataatttcacatttcctacgga 27460792  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 31844592 - 31844646
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  31844592 ttcctgcgaataatttcacatttcctacggatatatctttcctgcggaacctaaa 31844646  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 481
Target Start/End: Complemental strand, 6331859 - 6331806
Alignment:
Q  428 gcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    ||||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  6331859 gcaaaaaatttatcgcaaaacgttacttccttccttcaaataatttcacatttc 6331806  T

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Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 44238796 - 44238845
Alignment:
Q  462 tgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  44238796 tgcgaatattttcacatttcctgcggataatttcacatttcatgcggata 44238845  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 492 - 552
Target Start/End: Original strand, 44238805 - 44238865
Alignment:
Q  492 tttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatccta 552  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||||  ||| |||||||    
T  44238805 tttcacatttcctgcggataatttcacatttcatgcggatatatctttcttgcagatccta 44238865  T

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Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 49898552 - 49898492
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||| |||||||||||||||||  ||||| ||||||  |||||||||||||||||||    
T  49898552 ttcctgcgaataatttcacatttcctgtggatatatctttcttgcggatcctaaaatccta 49898492  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 509 - 560
Target Start/End: Complemental strand, 34459276 - 34459225
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||||||||    
T  34459276 ataatttcacatttcctacagatatatctttcttgcggatcctaaaatccta 34459225  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 530
Target Start/End: Complemental strand, 4774127 - 4774085
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacgga 530  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  4774127 ataatttcacatttcttgcggataatttcacatttcctgcgga 4774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 25011497 - 25011562
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||  ||||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  25011497 ataattttgcattttctgcagataatttcacatttcctacggatatatcttt-ctgcggaacctaaa 25011562  T

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Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 33468922 - 33468976
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||| ||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  33468922 ttcctgcgaataatttcacatttcctacagatatatctttcctgcggaacctaaa 33468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 554
Target Start/End: Complemental strand, 6331820 - 6331775
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  6331820 ataatttcacatttcctacggatatatctttcctgcggaacctaaa 6331775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 509 - 554
Target Start/End: Complemental strand, 8239427 - 8239382
Alignment:
Q  509 ataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  8239427 ataatttcacatttcctacggatatatctttcctgcggaacctaaa 8239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 9527221 - 9527161
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatccta 560  Q
    |||||||| |||||||||||||||||| ||||| ||||||   | ||||||||||||||||    
T  9527221 ttcctgcgaataatttcacatttcctatggatatatctttctggaggatcctaaaatccta 9527161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 24646269 - 24646189
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || | |||||||||||| ||||| ||||| |||||||| ||| |||||||| ||||| |||||    
T  24646269 cggagccaggaattttatagagcctgggcaaaaaaattatctcaaaatgttacttccttcatgcgaataatttcaaatttc 24646189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 490
Target Start/End: Original strand, 6802006 - 6802067
Alignment:
Q  429 caaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagata 490  Q
    |||||||||||||||||||||||| ||| | | |||| ||| || |||||||| ||||||||    
T  6802006 caaaaaatttatcgcaaaacgttatttcctacatgcggataattgcacatttcctgcagata 6802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 481
Target Start/End: Complemental strand, 24745626 - 24745548
Alignment:
Q  401 cggagccaagaaatttacagggtctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||| ||| |||| || |||||||||||||| |||||||  || |||||||  ||| |||||||| |||||||||||    
T  24745626 cggagccaggaattttatagagtctgggcaaaaaaattatcgc--aatgttactttcttcatgcgaataatttcacatttc 24745548  T

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Target: scaffold0075 (Bit Score: 64; Significance: 1e-27; HSPs: 4)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 11722 - 11635
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  11722 ctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcacatttcctacggata 11635  T

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Target: scaffold0075; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 7108 - 7022
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttcttgcagataatttcacatttcctgcggata 511  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||| ||| ||||| |||||||||||| ||||||    
T  7108 ctgggcaaaaaatttatcgcaaa-cgttacttccttcctacgaataattttacatttcctgctgataaattcacatttcctacggata 7022  T

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Target: scaffold0075; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 11679 - 11613
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||    
T  11679 ataatttcacatttcctgcagataaattcacatttcctacggatatatctttcctgcggaacctaaa 11613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 7066 - 7000
Alignment:
Q  488 ataatttcacatttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaa 554  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||| ||| || ||||||| ||||||    
T  7066 ataattttacatttcctgctgataaattcacatttcctacggatatatccttcctgcggaacctaaa 7000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 4276 - 4219
Alignment:
Q  424 ctgggcaaaaaatttatcgcaaaacgttacttctttcctgcgaatattttcacatttc 481  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||    
T  4276 ctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttc 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 562
Target Start/End: Original strand, 112156 - 112218
Alignment:
Q  500 ttcctgcggataatttcacatttcctacggatacatctttactgcggatcctaaaatcctatg 562  Q
    |||||||  |||||||||| |||| |  ||||| |||||| ||||||||||||||||||||||    
T  112156 ttcctgcaaataatttcacgtttcatgtggatatatctttcctgcggatcctaaaatcctatg 112218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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