View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21658_low_13 (Length: 304)

Name: NF21658_low_13
Description: NF21658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21658_low_13
NF21658_low_13
[»] chr1 (51 HSPs)
chr1 (1-294)||(9628294-9628587)
chr1 (1-39)||(18952536-18952574)
chr1 (1-41)||(11354459-11354499)
chr1 (1-41)||(18057585-18057625)
chr1 (1-41)||(21256055-21256095)
chr1 (1-41)||(23921153-23921193)
chr1 (1-41)||(28322615-28322655)
chr1 (1-41)||(31763831-31763871)
chr1 (1-41)||(33157047-33157087)
chr1 (1-41)||(37642906-37642946)
chr1 (1-40)||(2741521-2741560)
chr1 (1-39)||(12070560-12070598)
chr1 (1-41)||(6708373-6708413)
chr1 (1-41)||(9040999-9041039)
chr1 (1-41)||(18928834-18928874)
chr1 (1-41)||(20506524-20506564)
chr1 (1-41)||(23174618-23174658)
chr1 (1-41)||(23174749-23174789)
chr1 (1-41)||(23319243-23319283)
chr1 (1-41)||(30788792-30788832)
chr1 (1-41)||(31084014-31084054)
chr1 (1-41)||(31084191-31084231)
chr1 (1-41)||(31529003-31529043)
chr1 (1-41)||(32143716-32143756)
chr1 (1-41)||(32595160-32595200)
chr1 (1-41)||(35197604-35197644)
chr1 (1-41)||(45890393-45890433)
chr1 (1-41)||(47693814-47693854)
chr1 (1-41)||(51904830-51904870)
chr1 (1-39)||(1395220-1395258)
chr1 (1-31)||(14229319-14229349)
chr1 (1-31)||(16116481-16116511)
chr1 (1-39)||(30802979-30803017)
chr1 (1-39)||(33097824-33097862)
chr1 (1-31)||(35197438-35197468)
chr1 (1-39)||(51420870-51420908)
chr1 (1-30)||(2741564-2741593)
chr1 (4-41)||(23921328-23921365)
chr1 (1-41)||(180503-180543)
chr1 (1-41)||(16116657-16116697)
chr1 (1-41)||(17811139-17811179)
chr1 (1-41)||(19216570-19216610)
chr1 (1-41)||(19216613-19216653)
chr1 (1-41)||(28322572-28322612)
chr1 (1-41)||(29945273-29945313)
chr1 (1-41)||(31528960-31529000)
chr1 (1-41)||(35754625-35754665)
chr1 (1-41)||(44261134-44261174)
chr1 (1-41)||(45849257-45849297)
chr1 (1-41)||(51801013-51801053)
chr1 (1-41)||(51801056-51801096)
[»] chr6 (24 HSPs)
chr6 (1-41)||(22857625-22857665)
chr6 (1-41)||(16967563-16967603)
chr6 (1-41)||(18611953-18611993)
chr6 (1-38)||(29157783-29157820)
chr6 (1-41)||(7765193-7765233)
chr6 (1-41)||(10588901-10588941)
chr6 (1-41)||(15008077-15008117)
chr6 (1-41)||(15008253-15008293)
chr6 (1-37)||(18611777-18611813)
chr6 (1-41)||(24736786-24736826)
chr6 (1-41)||(33345546-33345586)
chr6 (1-39)||(30387150-30387188)
chr6 (4-41)||(4102625-4102662)
chr6 (1-41)||(10698725-10698766)
chr6 (1-41)||(878040-878080)
chr6 (1-41)||(878183-878223)
chr6 (1-41)||(4338220-4338260)
chr6 (1-41)||(19281432-19281472)
chr6 (1-41)||(21384937-21384977)
chr6 (1-41)||(22031742-22031782)
chr6 (1-41)||(25119418-25119458)
chr6 (1-41)||(27079734-27079774)
chr6 (1-41)||(30909203-30909243)
chr6 (1-29)||(30909379-30909407)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-41)||(6312-6352)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-41)||(24542-24582)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-41)||(28441-28481)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-41)||(14398-14438)
[»] chr8 (32 HSPs)
chr8 (1-41)||(1672186-1672226)
chr8 (1-41)||(17656674-17656714)
chr8 (1-41)||(18161345-18161385)
chr8 (1-39)||(40022605-40022643)
chr8 (1-41)||(185937-185977)
chr8 (1-41)||(1209586-1209626)
chr8 (1-41)||(2541138-2541177)
chr8 (1-41)||(4835880-4835920)
chr8 (1-41)||(4841325-4841365)
chr8 (1-41)||(7058973-7059013)
chr8 (1-41)||(10586009-10586049)
chr8 (1-41)||(13526229-13526269)
chr8 (1-41)||(13615764-13615804)
chr8 (1-41)||(23397232-23397272)
chr8 (1-41)||(27506854-27506894)
chr8 (1-41)||(35301844-35301884)
chr8 (1-41)||(35448290-35448330)
chr8 (1-41)||(40246600-40246640)
chr8 (3-38)||(39022768-39022803)
chr8 (1-39)||(1773239-1773277)
chr8 (1-39)||(9852848-9852886)
chr8 (1-39)||(9853045-9853083)
chr8 (1-38)||(32644198-32644235)
chr8 (4-41)||(34343308-34343345)
chr8 (1-41)||(6783489-6783529)
chr8 (1-41)||(13526186-13526226)
chr8 (1-41)||(13615721-13615761)
chr8 (1-41)||(17792840-17792880)
chr8 (1-41)||(18026938-18026978)
chr8 (1-41)||(23504641-23504681)
chr8 (1-41)||(23940762-23940802)
chr8 (1-41)||(42434365-42434405)
[»] chr7 (26 HSPs)
chr7 (1-41)||(5728736-5728776)
chr7 (1-41)||(15974076-15974116)
chr7 (1-41)||(30430550-30430590)
chr7 (1-41)||(32090044-32090084)
chr7 (1-41)||(39007225-39007265)
chr7 (1-41)||(43742305-43742345)
chr7 (3-41)||(41065917-41065955)
chr7 (1-39)||(48306141-48306179)
chr7 (1-41)||(6846727-6846767)
chr7 (1-41)||(24360554-24360594)
chr7 (1-41)||(25779505-25779545)
chr7 (1-41)||(26945662-26945702)
chr7 (1-41)||(31192504-31192544)
chr7 (1-41)||(32090087-32090127)
chr7 (1-41)||(44426654-44426694)
chr7 (1-41)||(48691838-48691878)
chr7 (1-41)||(48830212-48830252)
chr7 (1-39)||(27334934-27334972)
chr7 (3-41)||(27334975-27335013)
chr7 (1-39)||(32091320-32091358)
chr7 (1-38)||(46346155-46346192)
chr7 (1-41)||(31365327-31365367)
chr7 (1-29)||(34876236-34876264)
chr7 (1-41)||(44140506-44140546)
chr7 (1-41)||(46572790-46572830)
chr7 (1-41)||(48830388-48830428)
[»] chr5 (23 HSPs)
chr5 (1-41)||(23155698-23155738)
chr5 (1-41)||(23334938-23334978)
chr5 (1-41)||(28069446-28069486)
chr5 (1-41)||(703866-703906)
chr5 (1-41)||(2826240-2826280)
chr5 (1-41)||(8949477-8949517)
chr5 (1-41)||(11376529-11376569)
chr5 (1-41)||(11660930-11660970)
chr5 (1-41)||(15059489-15059529)
chr5 (1-41)||(22671852-22671892)
chr5 (1-41)||(35915891-35915931)
chr5 (1-39)||(23155581-23155619)
chr5 (1-38)||(25016468-25016505)
chr5 (1-37)||(13363570-13363606)
chr5 (1-41)||(16668231-16668271)
chr5 (1-41)||(20134347-20134387)
chr5 (1-41)||(33857491-33857531)
chr5 (1-41)||(33868759-33868799)
chr5 (1-41)||(39086573-39086613)
chr5 (1-41)||(39166288-39166328)
chr5 (1-41)||(39861728-39861768)
chr5 (1-41)||(42746575-42746615)
chr5 (1-41)||(42746695-42746735)
[»] chr4 (47 HSPs)
chr4 (1-41)||(1492728-1492768)
chr4 (1-41)||(6841968-6842008)
chr4 (1-41)||(10473305-10473345)
chr4 (1-41)||(12722886-12722926)
chr4 (1-41)||(17109867-17109907)
chr4 (1-41)||(21995726-21995766)
chr4 (1-41)||(36924297-36924337)
chr4 (1-41)||(50644492-50644532)
chr4 (1-41)||(54895460-54895500)
chr4 (1-39)||(9553078-9553116)
chr4 (3-41)||(30358628-30358666)
chr4 (1-39)||(33883433-33883471)
chr4 (1-38)||(8166029-8166066)
chr4 (1-41)||(6385741-6385781)
chr4 (1-41)||(6385784-6385824)
chr4 (1-41)||(8157237-8157277)
chr4 (1-41)||(9967818-9967858)
chr4 (1-41)||(16474968-16475008)
chr4 (1-41)||(22180433-22180473)
chr4 (1-41)||(25573603-25573643)
chr4 (1-41)||(27765055-27765095)
chr4 (1-41)||(29825919-29825959)
chr4 (1-41)||(29826095-29826135)
chr4 (1-41)||(31763056-31763096)
chr4 (1-41)||(47567952-47567992)
chr4 (1-41)||(49137343-49137383)
chr4 (1-41)||(50562899-50562939)
chr4 (2-41)||(25573646-25573685)
chr4 (1-39)||(2124495-2124533)
chr4 (3-41)||(16299386-16299424)
chr4 (1-39)||(43852161-43852199)
chr4 (5-39)||(48077323-48077357)
chr4 (1-38)||(8165913-8165950)
chr4 (1-30)||(9552196-9552225)
chr4 (4-41)||(18924056-18924093)
chr4 (1-42)||(26577470-26577511)
chr4 (1-38)||(37059866-37059903)
chr4 (4-41)||(38245714-38245751)
chr4 (1-41)||(638782-638822)
chr4 (1-41)||(1729012-1729052)
chr4 (6-38)||(4169200-4169232)
chr4 (1-41)||(10374099-10374139)
chr4 (1-41)||(21097908-21097948)
chr4 (1-41)||(25573689-25573729)
chr4 (1-41)||(36309472-36309512)
chr4 (1-41)||(38010506-38010546)
chr4 (1-41)||(43374503-43374543)
[»] chr3 (30 HSPs)
chr3 (1-41)||(19384597-19384637)
chr3 (1-41)||(23755887-23755927)
chr3 (1-41)||(52986840-52986880)
chr3 (1-41)||(53595446-53595486)
chr3 (1-39)||(16276909-16276947)
chr3 (1-39)||(51681429-51681467)
chr3 (4-41)||(16653555-16653592)
chr3 (4-41)||(19012450-19012487)
chr3 (4-41)||(47924314-47924351)
chr3 (1-41)||(8718903-8718943)
chr3 (1-41)||(9070790-9070830)
chr3 (5-41)||(12974139-12974175)
chr3 (1-41)||(27446161-27446201)
chr3 (1-41)||(28299517-28299557)
chr3 (1-41)||(36185853-36185893)
chr3 (1-41)||(47728959-47728999)
chr3 (1-41)||(52986709-52986749)
chr3 (1-36)||(9183777-9183812)
chr3 (1-32)||(31852970-31853001)
chr3 (4-39)||(49053376-49053411)
chr3 (1-39)||(41191626-41191664)
chr3 (1-41)||(23699879-23699919)
chr3 (1-41)||(23718334-23718374)
chr3 (1-41)||(23736790-23736830)
chr3 (1-41)||(23756063-23756103)
chr3 (1-41)||(28299474-28299514)
chr3 (1-41)||(28299560-28299600)
chr3 (1-41)||(34562614-34562654)
chr3 (1-41)||(39194559-39194599)
chr3 (1-41)||(41191801-41191841)
[»] chr2 (35 HSPs)
chr2 (1-41)||(1095316-1095356)
chr2 (1-41)||(16111569-16111609)
chr2 (1-41)||(19246718-19246758)
chr2 (1-41)||(20710559-20710599)
chr2 (1-41)||(31711566-31711606)
chr2 (1-39)||(34726746-34726784)
chr2 (1-39)||(35126643-35126681)
chr2 (3-41)||(39548441-39548479)
chr2 (1-38)||(30777477-30777514)
chr2 (4-41)||(31783852-31783889)
chr2 (1-38)||(37867210-37867247)
chr2 (1-41)||(2264311-2264351)
chr2 (1-41)||(4281225-4281265)
chr2 (1-41)||(18297391-18297431)
chr2 (1-41)||(20193975-20194015)
chr2 (1-41)||(20661543-20661583)
chr2 (1-41)||(42364548-42364588)
chr2 (6-41)||(13081322-13081357)
chr2 (1-39)||(36636160-36636198)
chr2 (1-39)||(43823472-43823510)
chr2 (1-38)||(3147237-3147274)
chr2 (1-41)||(3928220-3928260)
chr2 (1-41)||(4281048-4281088)
chr2 (1-41)||(12449191-12449231)
chr2 (1-41)||(13081279-13081319)
chr2 (1-41)||(14550638-14550678)
chr2 (5-41)||(22596452-22596488)
chr2 (1-41)||(25193648-25193688)
chr2 (1-41)||(25193779-25193819)
chr2 (1-41)||(28056017-28056057)
chr2 (1-41)||(39548482-39548522)
chr2 (1-37)||(41345306-41345342)
chr2 (1-41)||(41345478-41345518)
chr2 (1-41)||(44341893-44341933)
chr2 (1-41)||(44915439-44915479)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-38)||(23684-23721)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-41)||(96055-96095)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-41)||(80815-80853)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-38)||(203143-203180)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-41)||(20068-20108)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-41)||(72569-72609)


Alignment Details
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 9628587 - 9628294
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggtaacaaatatctaatttgtttggaaataagttcttgggtatagtctctaacatatatctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9628587 tggagtacaactcacagaaaccatttccacagtaaaatggtaacaaatatctaatttgtttggaaataagttcttgggtatagtctctaacatatatctg 9628488  T
Q  101 tctaggtatttacttttagatcaaaggcaaaatgggaaagccggaacggtaataaaggggagtatagaagaaaaaactagggtgcagaagttgttatctt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9628487 tctaggtatttacttttagaccaaaggcaaaatgggaaagccggaacggtaataaaagggagtatagaagaaaaaactagggtgcagaagttgttatctt 9628388  T
Q  201 aaatattccagcccagttaatgtaacatgcacatgcacaaatacaacatatgaaattagatagccatactgctactgctattcacactcctatg 294  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9628387 aaatattctagcccagttaatgtaacatgcacatgcacaaatacaacatatgaaattagatagccatactgctactgctattcacactcctatg 9628294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18952574 - 18952536
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18952574 tggagtacaactcacagaaaccatttccacagtaaaatg 18952536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11354499 - 11354459
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  11354499 tggagtacaactcacagaaaccatttccacagcaaaatggt 11354459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18057585 - 18057625
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  18057585 tggagtacaactcacagaaaccatttccacagcaaaatggt 18057625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21256095 - 21256055
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  21256095 tggagtacaactcacagaaaccatttccacagcaaaatggt 21256055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23921193 - 23921153
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  23921193 tggagtacaactcacagaaaccatttccacagcaaaatggt 23921153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28322655 - 28322615
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28322655 tggagtacaactcacagaaaccatttccacagcaaaatggt 28322615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31763831 - 31763871
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  31763831 tggagtacaactcacaaaaaccatttccacagtaaaatggt 31763871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33157047 - 33157087
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  33157047 tggagtacaactcacagaaaccatttccacaggaaaatggt 33157087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37642906 - 37642946
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  37642906 tggagtacaactcacagaaaccatttccacagcaaaatggt 37642946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2741521 - 2741560
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatgg 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  2741521 tggagtacaactcacagaaaccatttccacagcaaaatgg 2741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12070598 - 12070560
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  12070598 tggagtacaactcacagaaaccatttccacagcaaaatg 12070560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6708373 - 6708413
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  6708373 tggagtacaactcacagaaatcattttcacagtaaaatggt 6708413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9041039 - 9040999
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  9041039 tggagtacaattcatagaaaccatttccacagtaaaatggt 9040999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18928834 - 18928874
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  18928834 tggagtacaactcacagaaaccatttccacaacaaaatggt 18928874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20506564 - 20506524
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  20506564 tggagtacaactcacataaaccatttccacagcaaaatggt 20506524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23174658 - 23174618
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  23174658 tggagtacaactcacagaaaccatttccacaacaaaatggt 23174618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23174789 - 23174749
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  23174789 tggagtacaactcacagaaaccatttccacaacaaaatggt 23174749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23319283 - 23319243
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  23319283 tggagtacaactcacagaaaccatttccacaacaaaatggt 23319243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30788792 - 30788832
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  30788792 tggagtacaactcacagaaaccattttcacagcaaaatggt 30788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31084014 - 31084054
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  31084014 tggagtacaacacacagaaaccatttccacagcaaaatggt 31084054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31084191 - 31084231
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  31084191 tggagtacaactcacataaaccatttccacagcaaaatggt 31084231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31529043 - 31529003
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  31529043 tggagtacaactcacataaaccatttccacagaaaaatggt 31529003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32143756 - 32143716
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  32143756 tggagtacaattcacagaaatcatttccacagtaaaatggt 32143716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32595160 - 32595200
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  32595160 tggagtacaactcacagaaaccatttccacggcaaaatggt 32595200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35197644 - 35197604
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  35197644 tggagtacaactcacaaaaaccatttccacagcaaaatggt 35197604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45890393 - 45890433
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  45890393 tggagtacaactcacataaaccatttccacagcaaaatggt 45890433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47693854 - 47693814
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  47693854 tggagtacaactcacacaaaccatttccacagcaaaatggt 47693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51904870 - 51904830
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  51904870 tggagtacaattcacagaaatcatttccacagtaaaatggt 51904830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1395220 - 1395258
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  1395220 tggagtacaactcacagaaactatttccacagcaaaatg 1395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 14229349 - 14229319
Alignment:
Q  1 tggagtacaactcacagaaaccatttccaca 31  Q
    |||||||||||||||||||||||||||||||    
T  14229349 tggagtacaactcacagaaaccatttccaca 14229319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 16116481 - 16116511
Alignment:
Q  1 tggagtacaactcacagaaaccatttccaca 31  Q
    |||||||||||||||||||||||||||||||    
T  16116481 tggagtacaactcacagaaaccatttccaca 16116511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30802979 - 30803017
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  30802979 tggagtacaactcacataaaccatttccacagcaaaatg 30803017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33097824 - 33097862
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  33097824 tggagtccaactcacagaaaccatttccacagcaaaatg 33097862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 35197468 - 35197438
Alignment:
Q  1 tggagtacaactcacagaaaccatttccaca 31  Q
    |||||||||||||||||||||||||||||||    
T  35197468 tggagtacaactcacagaaaccatttccaca 35197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51420870 - 51420908
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  51420870 tggagtgcaactcacagaaaccatttccacagcaaaatg 51420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 2741564 - 2741593
Alignment:
Q  1 tggagtacaactcacagaaaccatttccac 30  Q
    ||||||||||||||||||||||||||||||    
T  2741564 tggagtacaactcacagaaaccatttccac 2741593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23921365 - 23921328
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  23921365 agtacaactcacaaaaaccatttccacagcaaaatggt 23921328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 180503 - 180543
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  180503 tggagtacaactcatagaaacaatttccacagaaaaatggt 180543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16116657 - 16116697
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||  ||||||||    
T  16116657 tggagtacaactcacagaaaccattttcacatcaaaatggt 16116697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17811139 - 17811179
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||| ||||| ||||||||    
T  17811139 tggagtacaactcacaaaaaccattttcacagcaaaatggt 17811179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19216570 - 19216610
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||| | |||||||||| ||||||||    
T  19216570 tggagtacaactcacagaagcaatttccacagcaaaatggt 19216610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19216613 - 19216653
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  19216613 tggagtccaactcacagaaaccatttccactgcaaaatggt 19216653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28322612 - 28322572
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  28322612 tggagtccaactcacagaaaccatttccactgcaaaatggt 28322572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29945273 - 29945313
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||  |||| ||||||||    
T  29945273 tggagtacaactcacagaaaccatttttacagcaaaatggt 29945313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31529000 - 31528960
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  31529000 tggagtccaactcacagaaaccatttccactgcaaaatggt 31528960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35754625 - 35754665
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||| ||||||| ||||||||||| ||||||||    
T  35754625 tggagtacaacttacagaaatcatttccacagcaaaatggt 35754665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44261134 - 44261174
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  44261134 tggagtccaactcacagaaaccatttccactgcaaaatggt 44261174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45849297 - 45849257
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||| ||| ||||||||||||||| ||||||||    
T  45849297 tggagtacaactaacaaaaaccatttccacagcaaaatggt 45849257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51801053 - 51801013
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  51801053 tggagtccaactcacagaaaccatttccactgcaaaatggt 51801013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51801096 - 51801056
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| || |||||||||||| ||||||||    
T  51801096 tggagtacaactcacaaaagccatttccacagcaaaatggt 51801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22857665 - 22857625
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22857665 tggagtacaactcacagaaaccatttccacagtaaaatggt 22857625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16967603 - 16967563
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  16967603 tggagtacaactcacagaaaccatttccacagcaaaatggt 16967563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18611953 - 18611993
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  18611953 tggagtacaactcacagaaaccatttccacagcaaaatggt 18611993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29157783 - 29157820
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29157783 tggagtacaactcacagaaaccatttccacagcaaaat 29157820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7765193 - 7765233
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  7765193 tggagtacaactcacagaaaccatttccacaacaaaatggt 7765233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10588941 - 10588901
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  10588941 tggagtacaactcacagaaactatttccacagcaaaatggt 10588901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15008117 - 15008077
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  15008117 tggagtacagctcacagaaaccatttccacagcaaaatggt 15008077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15008293 - 15008253
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  15008293 tggagtacaactcacataaaccatttccacagcaaaatggt 15008253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18611777 - 18611813
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaa 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18611777 tggagtacaactcacagaaaccatttccacagcaaaa 18611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24736826 - 24736786
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  24736826 tggagtacaactcacagaaaccatttccacaacaaaatggt 24736786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33345586 - 33345546
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  33345586 tggagtacaactcacagaaaccatttccacagataaatggt 33345546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30387188 - 30387150
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  30387188 tggagtacaactcacagaaaccatttctacagcaaaatg 30387150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4102662 - 4102625
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  4102662 agtacaactcacataaaccatttccacagcaaaatggt 4102625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10698766 - 10698725
Alignment:
Q  1 tggagtac-aactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  10698766 tggagtactaactcacagaaaccatttccacagcaaaatggt 10698725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 878040 - 878080
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  878040 tggagtacaactcacaaaaaccatttccacaacaaaatggt 878080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 878183 - 878223
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||  ||||||||    
T  878183 tggagtacaactcacagaaaccattttcacaacaaaatggt 878223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4338260 - 4338220
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||| ||||||||||| ||||||||    
T  4338260 tggagtacaactcatagaaatcatttccacagcaaaatggt 4338220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19281472 - 19281432
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||| ||||| ||||||||    
T  19281472 tggagtacaactcacagaaactattttcacagcaaaatggt 19281432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21384977 - 21384937
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  21384977 tggagtacaactcacagaaaccattttcatagcaaaatggt 21384937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22031782 - 22031742
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  22031782 tggagtccaactcacagaaaccattttcacagcaaaatggt 22031742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25119458 - 25119418
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  25119458 tggagtacaactgacagaaaccatttacacagcaaaatggt 25119418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27079774 - 27079734
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  27079774 tggagtacaactcacagaaatcatttccacaacaaaatggt 27079734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30909203 - 30909243
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| ||||||||||||||||| || ||||||||    
T  30909203 tggagtacaacacacagaaaccatttccatagcaaaatggt 30909243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 30909379 - 30909407
Alignment:
Q  1 tggagtacaactcacagaaaccatttcca 29  Q
    |||||||||||||||||||||||||||||    
T  30909379 tggagtacaactcacagaaaccatttcca 30909407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6312 - 6352
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  6312 tggagtacaactcacagaaaccatttccacagcaaaatggt 6352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24582 - 24542
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  24582 tggagtacaactcacagaaaccatttccacagcaaaatggt 24542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28441 - 28481
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28441 tggagtacaactcacagaaaccatttccacagcaaaatggt 28481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14398 - 14438
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  14398 tggagtacaactcacagaaaccatttccacagcaaaatggt 14438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1672186 - 1672226
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  1672186 tggagtacaactcacagaaaccatttccacagcaaaatggt 1672226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17656674 - 17656714
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  17656674 tggagtacaactcacagaaaccatttccacagcaaaatggt 17656714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18161345 - 18161385
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18161345 tggagtacaaatcacagaaaccatttccacagtaaaatggt 18161385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40022643 - 40022605
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  40022643 tggagtacaactcacagaaaccatttccacagcaaaatg 40022605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 185937 - 185977
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  185937 tggagtacaactcacagaaaccatttccacaacaaaatggt 185977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1209586 - 1209626
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  1209586 tggagtacaactcacagaaatcatttccacagcaaaatggt 1209626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2541177 - 2541138
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  2541177 tggagtacaactcacagaaacc-tttccacagtaaaatggt 2541138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4835920 - 4835880
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  4835920 tggagtacaactcatagaaaccatttccacagaaaaatggt 4835880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4841365 - 4841325
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  4841365 tggagtacaactcatagaaaccatttccacagaaaaatggt 4841325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7058973 - 7059013
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  7058973 tggagtacaactcacagaaaccatttccatagcaaaatggt 7059013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10586049 - 10586009
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  10586049 tggagtacaactcacagaaaccatttccacaacaaaatggt 10586009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13526269 - 13526229
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  13526269 tggagtacaactcacagaaaccattttcacagcaaaatggt 13526229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13615804 - 13615764
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  13615804 tggagtacaactcacagaaaccattttcacagcaaaatggt 13615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23397232 - 23397272
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  23397232 tggagtacaactcacagaaaccatttccacatcaaaatggt 23397272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27506894 - 27506854
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  27506894 tggagtacaactcacagaaactatttccacagcaaaatggt 27506854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35301884 - 35301844
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  35301884 tggagtacaactcacataaaccatttccacagcaaaatggt 35301844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35448290 - 35448330
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  35448290 tggagtacaactcacagaaatcatttccacagcaaaatggt 35448330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40246640 - 40246600
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  40246640 tggagtacaactcacagaaaccatttccactgcaaaatggt 40246600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 39022768 - 39022803
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||| |||||    
T  39022768 gagtacaactcacagaaaccatttccacagcaaaat 39022803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1773277 - 1773239
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  1773277 tggagtacaactcacaaaaaccatttccacagcaaaatg 1773239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9852848 - 9852886
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  9852848 tggagtacaacacacagaaaccatttccacagcaaaatg 9852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9853045 - 9853083
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  9853045 tggagtacaactcacaaaaaccatttccacagcaaaatg 9853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32644235 - 32644198
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  32644235 tggagtacaactcacagaaatcatttccacagcaaaat 32644198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 34343308 - 34343345
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34343308 agtacaactcacaaaaaccatttccacagcaaaatggt 34343345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6783489 - 6783529
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||| ||||| ||||||||    
T  6783489 tggagtacaactcacagaaactattttcacagcaaaatggt 6783529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13526226 - 13526186
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  13526226 tggagtccaactcacagaaaccatttccactgcaaaatggt 13526186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13615761 - 13615721
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  13615761 tggagtccaactcacagaaaccatttccactgcaaaatggt 13615721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17792880 - 17792840
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||| ||||| ||||||||    
T  17792880 tggagtacaactcacagaaatcatttacacagcaaaatggt 17792840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18026938 - 18026978
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  18026938 tggagtccaactcacagaaaccattttcacagcaaaatggt 18026978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23504681 - 23504641
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||| |||||| ||||| ||||||||    
T  23504681 tggagtacaactcacagaatccattttcacagcaaaatggt 23504641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23940802 - 23940762
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||| ||||| ||||||||    
T  23940802 tggagtacaactcatagaaaccattttcacagcaaaatggt 23940762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42434365 - 42434405
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  42434365 tggagtacaactcacataaaccatttccacaacaaaatggt 42434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5728736 - 5728776
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  5728736 tggagtacaactcacagaaaccatttccacagcaaaatggt 5728776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15974116 - 15974076
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  15974116 tggagtacaactcacagaaaccatttccacagcaaaatggt 15974076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30430550 - 30430590
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  30430550 tggagtacaactcacagaaaccatttccacagcaaaatggt 30430590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32090084 - 32090044
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  32090084 tggagtacaactcacagaaaccatttccacagcaaaatggt 32090044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39007265 - 39007225
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  39007265 tggagtacaactcacagaaaccatttccacagcaaaatggt 39007225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43742305 - 43742345
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  43742305 tggagtacaactcacagaaaccatttccacagcaaaatggt 43742345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 41065955 - 41065917
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  41065955 gagtacaactcacagaaaccatttccacagcaaaatggt 41065917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48306141 - 48306179
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  48306141 tggagtacaactcacagaaaccatttccacagcaaaatg 48306179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6846767 - 6846727
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  6846767 tggagtacaactcatagaaaccatttccacagcaaaatggt 6846727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24360554 - 24360594
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  24360554 tggagtacaactcacagaaaccatttccacatcaaaatggt 24360594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25779505 - 25779545
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  25779505 tggagtacaactcatagaaaccatttccacagcaaaatggt 25779545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26945702 - 26945662
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  26945702 tggagtacaactcacagaaactatttccacagcaaaatggt 26945662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31192544 - 31192504
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  31192544 tggagtacaattcacagaaaccatttccacagcaaaatggt 31192504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32090127 - 32090087
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  32090127 tggagtacaactcacaaaaaccatttccacagcaaaatggt 32090087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44426654 - 44426694
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  44426654 tggagtacaactcacataaaccatttccacagcaaaatggt 44426694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48691838 - 48691878
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  48691838 tggagtacaactcacaaaaaccatttccacagcaaaatggt 48691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48830212 - 48830252
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  48830212 tggagtacaacacacagaaaccatttccacagcaaaatggt 48830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27334972 - 27334934
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  27334972 tggagtccaactcacagaaaccatttccacagcaaaatg 27334934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 27335013 - 27334975
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  27335013 gagtacaattcacagaaaccatttccacagcaaaatggt 27334975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32091320 - 32091358
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  32091320 tggagtacaactcacagaaactatttccacagcaaaatg 32091358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46346192 - 46346155
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  46346192 tggagtacaactcacagaaaccattttcacagcaaaat 46346155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31365327 - 31365367
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||| ||||||||||||||| ||||||||    
T  31365327 tggagtacaagtcacataaaccatttccacagcaaaatggt 31365367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 34876236 - 34876264
Alignment:
Q  1 tggagtacaactcacagaaaccatttcca 29  Q
    |||||||||||||||||||||||||||||    
T  34876236 tggagtacaactcacagaaaccatttcca 34876264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44140546 - 44140506
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| |||| |||||||||| ||||||||    
T  44140546 tggagtacaactcacaaaaactatttccacagcaaaatggt 44140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46572830 - 46572790
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||  ||||||||    
T  46572830 tggagtacaactcatagaaaccatttccacaacaaaatggt 46572790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48830388 - 48830428
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  48830388 tggagtacaactcacagaaactatttccacatcaaaatggt 48830428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23155698 - 23155738
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  23155698 tggagtacaactcacagaaaccatttccacagcaaaatggt 23155738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23334978 - 23334938
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  23334978 tggagtacaactcacagaaaccatttccacagcaaaatggt 23334938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28069486 - 28069446
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28069486 tggagtacaactcacagaaaccatttccacagcaaaatggt 28069446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 703906 - 703866
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  703906 tggaatacaactcacaaaaaccatttccacagtaaaatggt 703866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2826280 - 2826240
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  2826280 tggagtacaactcacagaaactatttccacagcaaaatggt 2826240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8949477 - 8949517
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  8949477 tggagtacaactcacaaaaaccatttccacagcaaaatggt 8949517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11376569 - 11376529
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  11376569 tggagaacaactcacagaaaccatttccacagcaaaatggt 11376529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11660970 - 11660930
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  11660970 tggaatacaactcacagaaaccatttccacagcaaaatggt 11660930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15059489 - 15059529
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  15059489 tggagtacaactcacagaaactatttccacagcaaaatggt 15059529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22671852 - 22671892
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  22671852 tggagtacaactcatagaaaccatttccacagcaaaatggt 22671892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35915891 - 35915931
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  35915891 tggagtacaactcacagaaaccatttccactgcaaaatggt 35915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23155581 - 23155619
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  23155581 tggagtacaactcacagaaaccattttcacagcaaaatg 23155619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25016505 - 25016468
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  25016505 tggagtataactcacagaaaccatttccacagcaaaat 25016468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13363570 - 13363606
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaa 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  13363570 tggagtacaattcacagaaaccatttccacagcaaaa 13363606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16668271 - 16668231
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||| ||| ||||||||    
T  16668271 tggagtacaactcacaaaaaccatttcctcagcaaaatggt 16668231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20134387 - 20134347
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  20134387 tggagtacaactcacataaatcatttccacagcaaaatggt 20134347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33857531 - 33857491
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||||||||  ||||||||    
T  33857531 tggagtacaattcacagaaaccatttccacaacaaaatggt 33857491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33868759 - 33868799
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  33868759 tggagtacaactcacataaatcatttccacagcaaaatggt 33868799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39086573 - 39086613
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  39086573 tggagtacaactcacaaaaaccatttccacaacaaaatggt 39086613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39166328 - 39166288
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||| ||||||||||||||||||||| || ||||||||    
T  39166328 tggagtataactcacagaaaccatttccatagcaaaatggt 39166288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39861768 - 39861728
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  39861768 tggagtacaactcacataaatcatttccacagcaaaatggt 39861728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42746575 - 42746615
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| |||| |||||||||| ||||||||    
T  42746575 tggagtacaactcacataaactatttccacagcaaaatggt 42746615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42746695 - 42746735
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| |||| |||||||||| ||||||||    
T  42746695 tggagtacaactcacataaactatttccacagcaaaatggt 42746735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1492728 - 1492768
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  1492728 tggagtacaactcacagaaaccatttccatagtaaaatggt 1492768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6842008 - 6841968
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  6842008 tggagtacaacttacagaaaccatttccacagtaaaatggt 6841968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10473305 - 10473345
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  10473305 tggagtacaactcacagaaaccatttccacagcaaaatggt 10473345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12722926 - 12722886
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  12722926 tggagtacaactcacagaaaccatttccacagcaaaatggt 12722886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17109907 - 17109867
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  17109907 tggagtacaactcacagaaaccatttccacagcaaaatggt 17109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21995726 - 21995766
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  21995726 tggagtacaactcacagaaaccatttccacagcaaaatggt 21995766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36924297 - 36924337
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  36924297 tggagtacaactcacagaaaccatttccacagcaaaatggt 36924337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50644492 - 50644532
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  50644492 tggagtacaactcacagaaaccatttccacagcaaaatggt 50644532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54895460 - 54895500
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  54895460 tggagtacaactcacagaaaccatttccacagcaaaatggt 54895500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9553116 - 9553078
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  9553116 tggagtacaactcacagaaaccatttccacagcaaaatg 9553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 30358628 - 30358666
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  30358628 gagtacaactcacagaaaccatttccacagcaaaatggt 30358666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33883471 - 33883433
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  33883471 tggagtacaactcacataaaccatttccacagtaaaatg 33883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8166066 - 8166029
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8166066 tggagtacaactcacagaaaccatttccacagcaaaat 8166029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6385781 - 6385741
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  6385781 tggagtccaactcacagaaaccatttccacagcaaaatggt 6385741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6385824 - 6385784
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  6385824 tggagtacaactcatagaaaccatttccacagcaaaatggt 6385784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8157277 - 8157237
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  8157277 tggagtacaactcacagaaaccatttccacaacaaaatggt 8157237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9967858 - 9967818
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  9967858 tggagtacaattcacagaaaccatttccatagtaaaatggt 9967818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16475008 - 16474968
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  16475008 tggagtacaactcacagaaaccatttccacaacaaaatggt 16474968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22180473 - 22180433
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  22180473 tggagtacaactcacataaaccatttccacagcaaaatggt 22180433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25573643 - 25573603
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  25573643 tggagtccaactcacagaaaccatttccacagcaaaatggt 25573603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27765055 - 27765095
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  27765055 tggagtacaactcacacaaaccatttccacagcaaaatggt 27765095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29825959 - 29825919
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  29825959 tggagtagaactcacagaaaccatttccacagcaaaatggt 29825919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29826135 - 29826095
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  29826135 tggagtacaacacacagaaaccatttccacagcaaaatggt 29826095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31763096 - 31763056
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  31763096 tggagtacaactcacagaaaccatttccacaccaaaatggt 31763056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47567952 - 47567992
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  47567952 tggagtacaattcacagaaaccatttccatagtaaaatggt 47567992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49137383 - 49137343
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  49137383 tggagtacaactcacataaaccatttccacagcaaaatggt 49137343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50562939 - 50562899
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  50562939 tggagtacaactcacagaaaccatttacacagcaaaatggt 50562899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 25573685 - 25573646
Alignment:
Q  2 ggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  25573685 ggagtacaactcacagaaaccatttccacaacaaaatggt 25573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2124533 - 2124495
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  2124533 tggagtaaaactcacagaaaccatttccacagcaaaatg 2124495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 16299386 - 16299424
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  16299386 gagtacaactcacagaaaccatttccactgcaaaatggt 16299424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43852199 - 43852161
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  43852199 tggagtacaactcacagaaaccaattccacagcaaaatg 43852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 48077357 - 48077323
Alignment:
Q  5 gtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  48077357 gtacaactcacagaaaccatttccacagcaaaatg 48077323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8165950 - 8165913
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  8165950 tggaatacaactcacagaaaccatttccacagcaaaat 8165913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9552225 - 9552196
Alignment:
Q  1 tggagtacaactcacagaaaccatttccac 30  Q
    ||||||||||||||||||||||||||||||    
T  9552225 tggagtacaactcacagaaaccatttccac 9552196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18924056 - 18924093
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  18924056 agtacaactcacagaaacaatttccacagcaaaatggt 18924093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26577511 - 26577470
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggta 42  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  26577511 tggattacaactcacagaaaccatttccacaacaaaatggta 26577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37059903 - 37059866
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  37059903 tggagtacaactcacaaaaaccatttccacagcaaaat 37059866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 38245714 - 38245751
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  38245714 agtacaactcacagaaaccatttacacagcaaaatggt 38245751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 638782 - 638822
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| |||||||||||| || ||||||||    
T  638782 tggagtacaactcacaaaaaccatttccatagaaaaatggt 638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1729052 - 1729012
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||| ||||||||||| ||||||||    
T  1729052 tggagtacaacacacagaaatcatttccacagcaaaatggt 1729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 4169200 - 4169232
Alignment:
Q  6 tacaactcacagaaaccatttccacagtaaaat 38  Q
    ||||||||||||||||||||||||||| |||||    
T  4169200 tacaactcacagaaaccatttccacagcaaaat 4169232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10374099 - 10374139
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||| | ||||||||    
T  10374099 tggagtacaactcacagaaaccattttcacggcaaaatggt 10374139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21097908 - 21097948
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  21097908 tggagtacaactcacataaaccatttccacatcaaaatggt 21097948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25573729 - 25573689
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  25573729 tggagtacaactcacaaaaaccatttccacaacaaaatggt 25573689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36309472 - 36309512
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  36309472 tggagtacaactcacataaatcatttccacagcaaaatggt 36309512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38010506 - 38010546
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  38010506 tggagtacaactcacaaaaaccatttccacaacaaaatggt 38010546  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43374503 - 43374543
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| |||||||||||| || ||||||||    
T  43374503 tggagtacaactcacataaaccatttccatagcaaaatggt 43374543  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19384637 - 19384597
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  19384637 tggagtacaactcacagaaaccatttccacagaaaaatggt 19384597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23755887 - 23755927
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  23755887 tggagtacaactcacagaaaccatttccacagcaaaatggt 23755927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52986880 - 52986840
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  52986880 tggagtacaactcatagaaaccatttccacagtaaaatggt 52986840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53595446 - 53595486
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  53595446 tggagtacaactcacagaaaccatttccacagcaaaatggt 53595486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16276947 - 16276909
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16276947 tggagtacaactcacagaaaccatttccacagcaaaatg 16276909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51681467 - 51681429
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  51681467 tggagtacaactcacagaaaccatttccacagcaaaatg 51681429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 16653555 - 16653592
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  16653555 agtacaactcacagaaaccatttccacagcaaaatggt 16653592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 19012450 - 19012487
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  19012450 agtacaactcacagaaaccatttccacagcaaaatggt 19012487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 47924351 - 47924314
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47924351 agtacaactcacagaaaccatttccacagcaaaatggt 47924314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8718903 - 8718943
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  8718903 tggagtacaactcacagaaaccatttccacaacaaaatggt 8718943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9070790 - 9070830
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  9070790 tggagtacaactcacagaaaccatttccacaacaaaatggt 9070830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 12974175 - 12974139
Alignment:
Q  5 gtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||| ||||||||    
T  12974175 gtacaactcacagaaaccatttccacagcaaaatggt 12974139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27446201 - 27446161
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  27446201 tggagtacaattcacagaaaccatttccacagcaaaatggt 27446161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28299557 - 28299517
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  28299557 tggagtacaactcacagaaaccatttccatagcaaaatggt 28299517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36185893 - 36185853
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  36185893 tggagtacaactcacaaaaaccatttccacagaaaaatggt 36185853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47728959 - 47728999
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  47728959 tggagtacaactcatagaaaccatttccacagcaaaatggt 47728999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52986749 - 52986709
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  52986749 tggagtacaactcacagaaaccatttccatagcaaaatggt 52986709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9183812 - 9183777
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  9183812 tggagtacaactcacagaaaccattttcacagtaaa 9183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31852970 - 31853001
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacag 32  Q
    ||||||||||||||||||||||||||||||||    
T  31852970 tggagtacaactcacagaaaccatttccacag 31853001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 49053411 - 49053376
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatg 39  Q
    ||||||||||||||||||||||||||||| ||||||    
T  49053411 agtacaactcacagaaaccatttccacagcaaaatg 49053376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41191664 - 41191626
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  41191664 tggagtacaactcacaaaaaccatttccacagcaaaatg 41191626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23699879 - 23699919
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||| ||||||||||||||||||||||||||| | ||||||    
T  23699879 tggaatacaactcacagaaaccatttccacagcagaatggt 23699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23718334 - 23718374
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||| ||||||||||||||||||||||||||| | ||||||    
T  23718334 tggaatacaactcacagaaaccatttccacagcagaatggt 23718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23736790 - 23736830
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||| ||||||||||||||||||||||||||| | ||||||    
T  23736790 tggaatacaactcacagaaaccatttccacagcagaatggt 23736830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23756063 - 23756103
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||| |||||||||||  ||||||||    
T  23756063 tggagtacaactcacagaagccatttccacatcaaaatggt 23756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28299514 - 28299474
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  28299514 tggagtccaactcacagaaaccatttccactgcaaaatggt 28299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28299600 - 28299560
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  28299600 tggagtacaactcacggaaaccatttccacaacaaaatggt 28299560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34562654 - 34562614
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||| ||||| ||||||||    
T  34562654 tggagtacaactcacataaaccattttcacagcaaaatggt 34562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39194599 - 39194559
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  39194599 tggagtacaactcacataaaccatttccacatcaaaatggt 39194559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41191841 - 41191801
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  41191841 tggagtacaacacacagaaaccatttccacaacaaaatggt 41191801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1095356 - 1095316
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  1095356 tggagtacaactcacagaaaccatttccacagcaaaatggt 1095316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16111569 - 16111609
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  16111569 tggagtacaactcacagaaaccattttcacagtaaaatggt 16111609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19246718 - 19246758
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  19246718 tggagtacaactcacagaaaccatttccacagcaaaatggt 19246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20710559 - 20710599
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  20710559 tggagtacaactcacagaaaccatttccacagcaaaatggt 20710599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31711566 - 31711606
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  31711566 tggagtacaactcacagaaaccatttccacagcaaaatggt 31711606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34726784 - 34726746
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  34726784 tggagtacaactcacagaaaccatttccacagcaaaatg 34726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35126681 - 35126643
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35126681 tggagtacaactcacagaaatcatttccacagtaaaatg 35126643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 39548441 - 39548479
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  39548441 gagtacaactcacagaaaccatttccacagcaaaatggt 39548479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30777514 - 30777477
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  30777514 tggagtacaactcacagaaaccatttccacagcaaaat 30777477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 31783852 - 31783889
Alignment:
Q  4 agtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  31783852 agtacaactcacagaaaccatttccacagcaaaatggt 31783889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37867210 - 37867247
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37867210 tggagtacaactcacagaaaccatttccacagcaaaat 37867247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2264311 - 2264351
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  2264311 tggagtacaactcacagaaaccatttctacagcaaaatggt 2264351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4281265 - 4281225
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  4281265 tggagtacaactcacagaaacaatttccacagcaaaatggt 4281225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18297431 - 18297391
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  18297431 tggagtacaactcacaaaaaccatttccacagcaaaatggt 18297391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20194015 - 20193975
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  20194015 tggagtacaactcacagaaatcattttcacagtaaaatggt 20193975  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20661583 - 20661543
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  20661583 tggagtacaactcacagaagccatttccacagcaaaatggt 20661543  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42364548 - 42364588
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  42364548 tggagtacaactcacagaaaccattttcacagcaaaatggt 42364588  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 13081357 - 13081322
Alignment:
Q  6 tacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||||||||| ||||||||    
T  13081357 tacaactcacagaaaccatttccacagcaaaatggt 13081322  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36636198 - 36636160
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  36636198 tggagtacaactcacaaaaaccatttccacagcaaaatg 36636160  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43823472 - 43823510
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatg 39  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  43823472 tggagtacaactcacataaaccatttccacagcaaaatg 43823510  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3147274 - 3147237
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  3147274 tggagtacaactcacataaaccatttccacagcaaaat 3147237  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3928220 - 3928260
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  3928220 tggagtccaactcacagaaaccattttcacagcaaaatggt 3928260  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4281088 - 4281048
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  4281088 tggagtataactcacagaaaccatttccacaacaaaatggt 4281048  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12449231 - 12449191
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||| ||||||||||| ||||| ||||||||    
T  12449231 tggagtacaactcaaagaaaccattttcacagcaaaatggt 12449191  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13081319 - 13081279
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||||||| | ||||||||    
T  13081319 tggagtccaactcacagaaaccatttccactgcaaaatggt 13081279  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14550678 - 14550638
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  14550678 tggagtacaactcacataaatcatttccacagcaaaatggt 14550638  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 22596488 - 22596452
Alignment:
Q  5 gtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  22596488 gtacaactcacagaaactatttccacaataaaatggt 22596452  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25193648 - 25193688
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  25193648 tggagtacaactcacagaaaccattttcaaagcaaaatggt 25193688  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25193779 - 25193819
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  25193779 tggagtacaactcacagaaaccattttcaaagcaaaatggt 25193819  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28056057 - 28056017
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||| |||||||||||||||||| ||||| ||||||||    
T  28056057 tggagtataactcacagaaaccattttcacagcaaaatggt 28056017  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39548482 - 39548522
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||| ||||||||||||| | ||||||||    
T  39548482 tggagtacaactcacataaaccatttccactgcaaaatggt 39548522  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41345342 - 41345306
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaa 37  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  41345342 tggagtacaactcacataaaccatttccacagcaaaa 41345306  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41345518 - 41345478
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  41345518 tggagtacaacacacagaaaccatttccacatcaaaatggt 41345478  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44341933 - 44341893
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  44341933 tggagtccaactcacagaaaccattttcacagcaaaatggt 44341893  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44915479 - 44915439
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||| ||||| ||||||||    
T  44915479 tggagtacaattcacagaaaccattttcacagcaaaatggt 44915439  T

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Target: scaffold0249 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23721 - 23684
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  23721 tggagtacaactcacagaaaccatttccacagcaaaat 23684  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 96055 - 96095
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  96055 tggagtacaaatcacagaaaccatttccacagcaaaatggt 96095  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 80853 - 80815
Alignment:
Q  3 gagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  80853 gagtataactcacagaaaccatttctacagtaaaatggt 80815  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 203180 - 203143
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaat 38  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  203180 tggagtacaactcacagaaacaatttccacagcaaaat 203143  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20108 - 20068
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  20108 tggagtacaactcacagaaacaatttccacaacaaaatggt 20068  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 72569 - 72609
Alignment:
Q  1 tggagtacaactcacagaaaccatttccacagtaaaatggt 41  Q
    |||||||||||||||||||| ||||| ||||| ||||||||    
T  72569 tggagtacaactcacagaaatcatttgcacagcaaaatggt 72609  T

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