View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21659_low_13 (Length: 236)

Name: NF21659_low_13
Description: NF21659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21659_low_13
NF21659_low_13
[»] chr6 (40 HSPs)
chr6 (1-235)||(12163521-12163755)
chr6 (1-232)||(12163365-12163596)
chr6 (6-205)||(12163203-12163402)
chr6 (81-235)||(12163680-12163834)
chr6 (33-199)||(12164229-12164395)
chr6 (1-115)||(12210684-12210798)
chr6 (131-236)||(12163331-12163436)
chr6 (56-235)||(12210723-12210902)
chr6 (32-118)||(12164211-12164297)
chr6 (9-107)||(12163361-12163459)
chr6 (32-118)||(12163953-12164039)
chr6 (66-199)||(12163971-12164104)
chr6 (32-107)||(12210752-12210827)
chr6 (132-226)||(12163311-12163405)
chr6 (32-139)||(12163170-12163277)
chr6 (131-206)||(12163301-12163376)
chr6 (32-107)||(12163709-12163784)
chr6 (161-235)||(12163392-12163466)
chr6 (162-235)||(12164322-12164395)
chr6 (185-235)||(12210903-12210953)
chr6 (1-40)||(12163971-12164010)
chr6 (66-199)||(12211017-12211147)
chr6 (78-172)||(12219148-12219245)
chr6 (1-47)||(12163301-12163347)
chr6 (131-205)||(12210693-12210767)
chr6 (138-232)||(12210696-12210790)
chr6 (26-76)||(12210903-12210953)
chr6 (159-196)||(12210912-12210949)
chr6 (1-97)||(12163341-12163437)
chr6 (18-90)||(12163696-12163768)
chr6 (162-206)||(12211106-12211150)
chr6 (161-220)||(12163218-12163277)
chr6 (162-217)||(12164052-12164107)
chr6 (155-202)||(12179191-12179238)
chr6 (69-154)||(12218992-12219080)
chr6 (191-236)||(12163739-12163784)
chr6 (162-199)||(12163863-12163900)
chr6 (191-236)||(12163994-12164039)
chr6 (191-235)||(12164253-12164297)
chr6 (144-199)||(12179161-12179219)


Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 12163755 - 12163521
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgg 100  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12163755 ctgggggaggaggtgacttatacttgtaaactggtggtggaggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaactggtggtgg 12163656  T
Q  101 gggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtgga 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12163655 gggagatgggtatttatatggcttttttggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtgga 12163556  T
Q  201 ggagatttatacttgtaaaccggtggaggaggtga 235  Q
    |||||||| |||||||| |||||||| ||||||||    
T  12163555 ggagatttgtacttgtacaccggtggtggaggtga 12163521  T

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Target: chr6; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 12163596 - 12163365
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgg 100  Q
    |||| |||||||| || || ||| |||||||||||||||| |||||||| |||||||| || || || |||||||||||||||||||||| ||| |||||    
T  12163596 ctggtggaggaggggatttatacttgtaaactggtggtggaggagatttgtacttgtacaccggtggtggaggtgatttgtacttgtaaactggcggtgg 12163497  T
Q  101 gggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtgga 200  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||    
T  12163496 tggagatgggtatttatatggcttcttaggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtacaccggtggagga 12163397  T
Q  201 ggagatttatacttgtaaaccggtggaggagg 232  Q
    || ||||| ||||||||||| ||||| |||||    
T  12163396 ggtgatttgtacttgtaaactggtggtggagg 12163365  T

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Target: chr6; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 12163402 - 12163203
Alignment:
Q  6 ggaggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggag 105  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||    
T  12163402 ggaggaggtgatttgtacttgtaaactggtggtggaggagatttatacttgtaaactggtggaggaggtgacttgtacttgtaaactggtggtggtggag 12163303  T
Q  106 atgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggaga 205  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  12163302 atggatatttatatggcttcttcggtggtggaggaggagacttatacttatacactggtggaggaggtgatttgtacttgtaaactggaggtggaggaga 12163203  T

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Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 12163834 - 12163680
Alignment:
Q  81 tacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtggaggaggggatttat 180  Q
    |||||||||| ||||||||| || ||||| || || ||||| || || ||||||||||| ||||| ||||||||||| ||||| |||||||| || ||||    
T  12163834 tacttgtaaactggtggtggtggtgatggatacttgtatggtttcttgggtggtggtggtggagatttgtacttgtaaactgggggaggaggtgacttat 12163735  T
Q  181 acttgtaaactggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  12163734 acttgtaaactggtggtggaggagatttatacttgtaaactggaggaggaggtga 12163680  T

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Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 12164395 - 12164229
Alignment:
Q  33 ggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtg 132  Q
    ||||| || ||||||||||||||||||||||| |||||||| || || || |||||||  |||||||| || |||||||| || ||||| || || ||||    
T  12164395 ggtggaggaggagatttatacttgtaaactggtggaggaggggacttatatttgtaaacgggtggtggtggtgatgggtacttgtatggtttcttgggtg 12164296  T
Q  133 gtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtgg 199  Q
    ||||||| ||||| ||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||    
T  12164295 gtggtggtggagatttgtacttgtaaactggaggaggaggtgatttgtacttgtaaactggcggtgg 12164229  T

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Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12210798 - 12210684
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || || || ||||||||||||||||||||||| | |||||||||    
T  12210798 ctgggggaggaggtgacttgtacttgtaaactggtggtgggggagattgatacttatataccggtggaggaggtgatttgtacttgtatactggtggtgg 12210699  T
Q  101 gggagatgggtattt 115  Q
     ||||| ||||||||    
T  12210698 aggagaagggtattt 12210684  T

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Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 12163436 - 12163331
Alignment:
Q  131 tggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtggagga 230  Q
    |||||| ||||| || || ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12163436 tggtggaggaggggatttatacttgtacaccggtggaggaggtgatttgtacttgtaaactggtggtggaggagatttatacttgtaaactggtggagga 12163337  T
Q  231 ggtgac 236  Q
    ||||||    
T  12163336 ggtgac 12163331  T

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Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 12210902 - 12210723
Alignment:
Q  56 gtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttg 155  Q
    |||||| || |||||||| || || |||||||||| ||||||||| || ||||  || || ||||| || || |||||||| || ||||| |||||||||    
T  12210902 gtaaacaggtggaggaggagacttatacttgtaaactggtggtggtggtgatgaatacttgtatggtttcttgggtggtgggggtggagatttgtacttg 12210803  T
Q  156 tacactggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    || ||||| |||||||| || || |||||||||||||||||||| ||||||| |||||| || |||||||||||||||||    
T  12210802 taaactgggggaggaggtgacttgtacttgtaaactggtggtgggggagattgatacttatataccggtggaggaggtga 12210723  T

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Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 12164297 - 12164211
Alignment:
Q  32 tggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttata 118  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| |||||    
T  12164297 tggtggtggtggagatttgtacttgtaaactggaggaggaggtgatttgtacttgtaaactggcggtggtggtgatgggtacttata 12164211  T

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Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 12163459 - 12163361
Alignment:
Q  9 ggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagat 107  Q
    ||||| ||||||||| |||| |||||||| || || |||||||||||||| || || ||||||||||||||||||||||||| ||||||||| ||||||    
T  12163459 ggaggagacttgtacttgtacactggtggaggaggggatttatacttgtacaccggtggaggaggtgatttgtacttgtaaactggtggtggaggagat 12163361  T

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Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 12164039 - 12163953
Alignment:
Q  32 tggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttata 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||| || |||||||| |||||    
T  12164039 tggtggtggtggagatttgtacttgtaaactgggggaggaggtgacttgtacttgtaaactggtggtggtggtgatgggtacttata 12163953  T

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Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 12164104 - 12163971
Alignment:
Q  66 ggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtg 165  Q
    |||||||| || || || ||||||| ||||||||| || ||||| || || ||||| || || ||||||||||| ||||| ||||||||||| ||||| |    
T  12164104 ggaggaggggacttatatttgtaaactggtggtggtggtgatggatacttgtatggtttcttgggtggtggtggtggagatttgtacttgtaaactgggg 12164005  T
Q  166 gaggaggggatttatacttgtaaactggtggtgg 199  Q
    ||||||| || || ||||||||||||||||||||    
T  12164004 gaggaggtgacttgtacttgtaaactggtggtgg 12163971  T

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Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 12210827 - 12210752
Alignment:
Q  32 tggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagat 107  Q
    |||||| || |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  12210827 tggtgggggtggagatttgtacttgtaaactgggggaggaggtgacttgtacttgtaaactggtggtgggggagat 12210752  T

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Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 12163405 - 12163311
Alignment:
Q  132 ggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtgg 226  Q
    ||||| ||||| || ||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||||||||| |||||    
T  12163405 ggtggaggaggtgatttgtacttgtaaactggtggtggaggagatttatacttgtaaactggtggaggaggtgacttgtacttgtaaactggtgg 12163311  T

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Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 12163277 - 12163170
Alignment:
Q  32 tggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggt 131  Q
    |||||| || ||||| |||||||| || ||||| ||||||||||||||||||||||||| ||| ||||| ||||| | |||||| |||||||| || ||     
T  12163277 tggtggaggaggagacttatacttatacactggtggaggaggtgatttgtacttgtaaactggaggtggaggagaagcgtatttgtatggcttctttgga 12163178  T
Q  132 ggtggtgg 139  Q
    ||||||||    
T  12163177 ggtggtgg 12163170  T

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Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 12163376 - 12163301
Alignment:
Q  131 tggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggagat 206  Q
    ||||||||||||||| || |||||||| |||||||||||||| || || |||||||||||||||||||| ||||||    
T  12163376 tggtggtggaggagatttatacttgtaaactggtggaggaggtgacttgtacttgtaaactggtggtggtggagat 12163301  T

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Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 12163784 - 12163709
Alignment:
Q  32 tggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtggtgggggagat 107  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||| ||||||||| ||||||    
T  12163784 tggtggtggtggagatttgtacttgtaaactgggggaggaggtgacttatacttgtaaactggtggtggaggagat 12163709  T

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Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 12163466 - 12163392
Alignment:
Q  161 tggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    |||||| ||||| || || |||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||    
T  12163466 tggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtacaccggtggaggaggtga 12163392  T

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Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 12164395 - 12164322
Alignment:
Q  162 ggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||| ||||| || |||||    
T  12164395 ggtggaggaggagatttatacttgtaaactggtggaggaggggacttatatttgtaaacgggtggtggtggtga 12164322  T

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Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 12210953 - 12210903
Alignment:
Q  185 gtaaactggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  12210953 gtaaactggtggaggaggagatttatacttgtaaactggtggaggtggtga 12210903  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12164010 - 12163971
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgg 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  12164010 ctgggggaggaggtgacttgtacttgtaaactggtggtgg 12163971  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 12211147 - 12211017
Alignment:
Q  66 ggaggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtggtggtggaggagacttgtacttgtacactggtg 165  Q
    |||||||| ||||| |||||||||| ||| ||||| ||||||||||| || ||||| || || || ||||| || |||||   |||||||||    || |    
T  12211147 ggaggaggagatttatacttgtaaactgggggtggtggagatgggtacttgtatggtttctttggaggtggagggggagatgagtacttgta---aggag 12211051  T
Q  166 gaggaggggatttatacttgtaaactggtggtgg 199  Q
    ||||||| || ||||||||||| |||||||||||    
T  12211050 gaggaggtgacttatacttgtagactggtggtgg 12211017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 12219245 - 12219148
Alignment:
Q  78 ttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggtggtggtg---gaggagacttgtacttgtacactggtggaggagg 172  Q
    ||||||||||||| ||||||||| || ||||| ||||| || | ||| || |||| |||||   ||||||||||||||||||| |||||||| |||||    
T  12219245 ttgtacttgtaaactggtggtggaggtgatggatatttgtaggtcttctttggtgatggtgacggaggagacttgtacttgtaaactggtggtggagg 12219148  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12163347 - 12163301
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgggggagat 47  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||    
T  12163347 ctggtggaggaggtgacttgtacttgtaaactggtggtggtggagat 12163301  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 12210767 - 12210693
Alignment:
Q  131 tggtggtggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggaga 205  Q
    ||||||||| ||||| |  ||||| || || ||||||||||| ||||| |||||||| |||||||||||||||||    
T  12210767 tggtggtgggggagattgatacttatataccggtggaggaggtgatttgtacttgtatactggtggtggaggaga 12210693  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 12210790 - 12210696
Alignment:
Q  138 ggaggagacttgtacttgtacactggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaaccggtggaggagg 232  Q
    ||||| |||||||||||||| |||||||| || || |||| |||||| || || ||||| ||||| ||||| |||||||| || ||||| |||||    
T  12210790 ggaggtgacttgtacttgtaaactggtggtgggggagattgatacttatataccggtggaggaggtgatttgtacttgtatactggtggtggagg 12210696  T

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Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 12210953 - 12210903
Alignment:
Q  26 gtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtga 76  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |||||    
T  12210953 gtaaactggtggaggaggagatttatacttgtaaactggtggaggtggtga 12210903  T

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Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 12210949 - 12210912
Alignment:
Q  159 actggtggaggaggggatttatacttgtaaactggtgg 196  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12210949 actggtggaggaggagatttatacttgtaaactggtgg 12210912  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12163437 - 12163341
Alignment:
Q  1 ctgggggaggaggtgacttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaattggtgg 97  Q
    |||| |||||||| || || ||| |||| || ||||| || || ||||| |||||||||||||| || ||||| ||||| |||||||||| ||||||    
T  12163437 ctggtggaggaggggatttatacttgtacaccggtggaggaggtgatttgtacttgtaaactggtggtggaggagatttatacttgtaaactggtgg 12163341  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12163768 - 12163696
Alignment:
Q  18 ttgtacatgtaaactggtggtgggggagatttatacttgtaaactggaggaggaggtgatttgtacttgtaaa 90  Q
    |||||| |||||||||| || || || || ||||||||||||||||| || ||||| ||||| ||||||||||    
T  12163768 ttgtacttgtaaactgggggaggaggtgacttatacttgtaaactggtggtggaggagatttatacttgtaaa 12163696  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 12211150 - 12211106
Alignment:
Q  162 ggtggaggaggggatttatacttgtaaactggtggtggaggagat 206  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  12211150 ggtggaggaggagatttatacttgtaaactgggggtggtggagat 12211106  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 12163277 - 12163218
Alignment:
Q  161 tggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgtaaac 220  Q
    |||||||||||| || |||||||| || |||||||| ||||| ||||| |||||||||||    
T  12163277 tggtggaggaggagacttatacttatacactggtggaggaggtgatttgtacttgtaaac 12163218  T

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Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 12164107 - 12164052
Alignment:
Q  162 ggtggaggaggggatttatacttgtaaactggtggtggaggagatttatacttgta 217  Q
    |||||||||||||| ||||| ||||||||||||||||| || |||  |||||||||    
T  12164107 ggtggaggaggggacttatatttgtaaactggtggtggtggtgatggatacttgta 12164052  T

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Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 12179238 - 12179191
Alignment:
Q  155 gtacactggtggaggaggggatttatacttgtaaactggtggtggagg 202  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||||    
T  12179238 gtacacgggtggaggtggggacttgtacttgtaaactggtggtggagg 12179191  T

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Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 12219080 - 12218992
Alignment:
Q  69 ggaggtgatttgtacttgtaaattggtggtgggggagatgggtatttatatggctttttaggt---ggtggtggaggagacttgtactt 154  Q
    |||||||| |||||| | || ||||||||||| || ||||| ||||| || ||||| || |||   |||||||||||||||||||||||    
T  12219080 ggaggtgacttgtacatatatattggtggtggaggtgatggatatttgtagggcttctttggtagcggtggtggaggagacttgtactt 12218992  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 12163784 - 12163739
Alignment:
Q  191 tggtggtggaggagatttatacttgtaaaccggtggaggaggtgac 236  Q
    ||||||||| |||||||| ||||||||||| || ||||||||||||    
T  12163784 tggtggtggtggagatttgtacttgtaaactgggggaggaggtgac 12163739  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 12163900 - 12163863
Alignment:
Q  162 ggtggaggaggggatttatacttgtaaactggtggtgg 199  Q
    ||||||||||| || |||||||||||||||||||||||    
T  12163900 ggtggaggaggagacttatacttgtaaactggtggtgg 12163863  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 12164039 - 12163994
Alignment:
Q  191 tggtggtggaggagatttatacttgtaaaccggtggaggaggtgac 236  Q
    ||||||||| |||||||| ||||||||||| || ||||||||||||    
T  12164039 tggtggtggtggagatttgtacttgtaaactgggggaggaggtgac 12163994  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 12164297 - 12164253
Alignment:
Q  191 tggtggtggaggagatttatacttgtaaaccggtggaggaggtga 235  Q
    ||||||||| |||||||| ||||||||||| || |||||||||||    
T  12164297 tggtggtggtggagatttgtacttgtaaactggaggaggaggtga 12164253  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 12179219 - 12179161
Alignment:
Q  144 gacttgtacttgtacactggtggaggagg---ggatttatacttgtaaactggtggtgg 199  Q
    |||||||||||||| |||||||| |||||   ||| || ||||||||||||||||||||    
T  12179219 gacttgtacttgtaaactggtggtggaggtggggacttgtacttgtaaactggtggtgg 12179161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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