View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2165_high_11 (Length: 238)
Name: NF2165_high_11
Description: NF2165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2165_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 44694225 - 44694005
Alignment:
| Q |
18 |
aattgtttctggcggagctacctatgaatctggaaaacatggaggacttgtttgatcgcctcactgtggttacgtgagattgatgcacgtgaacgtgatc |
117 |
Q |
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| T |
44694225 |
aattgtttctggcggagctacctatgaatctggaaaacatggaggacttgtttgatcgcctcactgtggttacgtgagattgatgcacgtgaacgtgatc |
44694126 |
T |
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| Q |
118 |
attggcacgtgaagtagtagtggttgcagtaatagaagtgattaaaggaactataccaggaatcccactttgtaataaacacaaagtatccattgttttt |
217 |
Q |
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||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
44694125 |
attggcacgtgaagtagtagtagttgcactaatagaagtgattaaaggaactataccaggaatcccactttgtaataaacacaaagtaaccattgttttt |
44694026 |
T |
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| Q |
218 |
aaagattatatgaatatggtt |
238 |
Q |
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||||||| ||||||||||||| |
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| T |
44694025 |
aaagattgtatgaatatggtt |
44694005 |
T |
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