View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2165_low_18 (Length: 211)
Name: NF2165_low_18
Description: NF2165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2165_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 26494534 - 26494650
Alignment:
| Q |
30 |
ttcttaaaacccacgtccgtgcccttcaagctaagaaacagtgtaacctaagcctgtttccttctttgtcttctttcctttgtcctctaaggatcctttt |
129 |
Q |
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| T |
26494534 |
ttcttaaaacccacgtccgtgcccttcaagctaagaaacagtgtaacctaagcctgtttccttctttgtcttctttcctttgtcctctaaggatcc-ctt |
26494632 |
T |
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| Q |
130 |
tgcttatcacataaggtt |
147 |
Q |
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|||||||||||||||||| |
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| T |
26494633 |
tgcttatcacataaggtt |
26494650 |
T |
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